Symbol:
Lrat
Name:
lecithin-retinol acyltransferase (phosphatidylcholine-retinol-O-acyltransferase)
RGD ID:
68516
MGI Page
MGI
Description:
Enables O-palmitoyltransferase activity and phosphatidylcholine-retinol O-acyltransferase activity. Involved in lipid storage and retinol metabolic process. Acts upstream of or within several processes, including cellular response to leukemia inhibitory factor; positive regulation of lipid transport; and vitamin A metabolic process. Located in endoplasmic reticulum. Is expressed in several structures, including extraembryonic component; gut; midbrain; reproductive system; and retina. Used to study Leber congenital amaurosis 14. Human ortholog(s) of this gene implicated in Leber congenital amaurosis 14 and retinitis pigmentosa. Orthologous to human LRAT (lecithin retinol acyltransferase).
Type:
protein-coding
RefSeq Status:
VALIDATED
Previously known as:
1300010A18Rik; AI449251; lecithin retinol acyltransferase; phosphatidylcholine--retinol O-acyltransferase; phosphatidylcholine-retinol-O-acyltransferase
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Species
Gene symbol and name
Data Source
Assertion derived from
less info ...
Orthologs 1
Homo sapiens (human):
LRAT (lecithin retinol acyltransferase) HGNC
EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):
Lrat (lecithin retinol acyltransferase) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):
Lrat (lecithin retinol acyltransferase) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):
LRAT (lecithin retinol acyltransferase) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Canis lupus familiaris (dog):
LRAT (lecithin retinol acyltransferase) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Lrat (lecithin retinol acyltransferase) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Sus scrofa (pig):
LRAT (lecithin retinol acyltransferase) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):
LRAT (lecithin retinol acyltransferase) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):
Lrat (lecithin retinol acyltransferase) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Alliance orthologs 3
Rattus norvegicus (Norway rat):
Lrat (lecithin retinol acyltransferase)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Homo sapiens (human):
LRAT (lecithin retinol acyltransferase)
Alliance
DIOPT (Ensembl Compara|HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Danio rerio (zebrafish):
lrata (lecithin retinol acyltransferase a)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|SonicParanoid|ZFIN)
Danio rerio (zebrafish):
lratb.1
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|SonicParanoid|ZFIN)
Xenopus tropicalis (tropical clawed frog):
lrat
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Latest Assembly:
GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 3 82,799,889 - 82,811,281 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 3 82,799,886 - 82,811,280 (-) Ensembl GRCm39 Ensembl GRCm38 3 82,892,582 - 82,903,974 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 3 82,892,579 - 82,903,973 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 3 82,696,504 - 82,707,896 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 3 82,978,509 - 82,989,901 (-) NCBI MGSCv36 mm8 Celera 3 82,903,193 - 82,914,568 (-) NCBI Celera Cytogenetic Map 3 E3 NCBI cM Map 3 36.81 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Only show annotations with direct experimental evidence (0 objects hidden)
Lrat Mouse (+)-schisandrin B multiple interactions ISO Lrat (Rattus norvegicus) 6480464 schizandrin B inhibits the reaction [Carbon Tetrachloride results in decreased expression of LRAT mRNA] CTD PMID:31150632 Lrat Mouse 1,1-dichloroethene decreases expression EXP 6480464 vinylidene chloride results in decreased expression of LRAT mRNA CTD PMID:26682919 Lrat Mouse 1,2-dimethylhydrazine decreases expression EXP 6480464 1 and 2-Dimethylhydrazine results in decreased expression of LRAT mRNA CTD PMID:22206623 Lrat Mouse 1-naphthyl isothiocyanate decreases expression ISO Lrat (Rattus norvegicus) 6480464 1-Naphthylisothiocyanate results in decreased expression of LRAT mRNA CTD PMID:25380136 Lrat Mouse 17alpha-ethynylestradiol increases expression ISO Lrat (Rattus norvegicus) 6480464 Ethinyl Estradiol results in increased expression of LRAT mRNA CTD PMID:17557909 Lrat Mouse 17beta-estradiol multiple interactions ISO LRAT (Homo sapiens) 6480464 [Estradiol co-treated with TGFB1 protein] results in decreased expression of LRAT mRNA CTD PMID:30165855 Lrat Mouse 17beta-estradiol decreases expression EXP 6480464 Estradiol results in decreased expression of LRAT mRNA CTD PMID:39298647 Lrat Mouse 2,3,7,8-tetrachlorodibenzodioxine increases activity ISO Lrat (Rattus norvegicus) 6480464 Tetrachlorodibenzodioxin results in increased activity of LRAT protein CTD PMID:11097864 Lrat Mouse 2,3,7,8-tetrachlorodibenzodioxine affects expression ISO Lrat (Rattus norvegicus) 6480464 Tetrachlorodibenzodioxin affects the expression of LRAT mRNA CTD PMID:22298810 Lrat Mouse 2,3,7,8-tetrachlorodibenzodioxine increases expression ISO Lrat (Rattus norvegicus) 6480464 Tetrachlorodibenzodioxin results in increased expression of LRAT mRNA CTD PMID:12606150 more ... Lrat Mouse 2,3,7,8-tetrachlorodibenzodioxine multiple interactions ISO Lrat (Rattus norvegicus) 6480464 [Tetrachlorodibenzodioxin results in increased activity of LRAT protein] which results in increased chemical synthesis of Tretinoin CTD PMID:11097864 Lrat Mouse 2,3,7,8-tetrachlorodibenzodioxine multiple interactions EXP 6480464 [TIPARP gene mutant form results in increased susceptibility to Tetrachlorodibenzodioxin] which results in increased expression of LRAT mRNA more ... CTD PMID:16292751 and PMID:25975270 Lrat Mouse 2,4-dibromophenyl 2,4,5-tribromophenyl ether affects expression EXP 6480464 2 more ... CTD PMID:38648751 Lrat Mouse 2-bromohexadecanoic acid increases expression ISO Lrat (Rattus norvegicus) 6480464 2-bromopalmitate results in increased expression of LRAT mRNA CTD PMID:12576510 Lrat Mouse 4,4'-diaminodiphenylmethane decreases expression ISO Lrat (Rattus norvegicus) 6480464 4 and 4'-diaminodiphenylmethane results in decreased expression of LRAT mRNA CTD PMID:25380136 and PMID:30723492 Lrat Mouse 4,4'-sulfonyldiphenol increases expression EXP 6480464 bisphenol S results in increased expression of LRAT mRNA CTD PMID:30951980 and PMID:39298647 Lrat Mouse 4-hydroxyphenyl retinamide increases expression EXP 6480464 Fenretinide results in increased expression of LRAT mRNA CTD PMID:28973697 Lrat Mouse aflatoxin B1 increases methylation ISO LRAT (Homo sapiens) 6480464 Aflatoxin B1 results in increased methylation of LRAT gene CTD PMID:28458013 Lrat Mouse all-trans-retinoic acid increases expression ISO LRAT (Homo sapiens) 6480464 Tretinoin results in increased expression of LRAT protein CTD PMID:15982314 Lrat Mouse all-trans-retinoic acid multiple interactions EXP 6480464 [mono-(2-ethylhexyl)phthalate co-treated with Tretinoin] results in increased expression of LRAT mRNA CTD PMID:36189433 Lrat Mouse all-trans-retinoic acid increases expression EXP 6480464 Tretinoin results in increased expression of LRAT mRNA CTD PMID:36189433 Lrat Mouse all-trans-retinoic acid increases expression ISO Lrat (Rattus norvegicus) 6480464 Tretinoin results in increased expression of LRAT mRNA CTD PMID:21138835 Lrat Mouse all-trans-retinoic acid decreases expression ISO LRAT (Homo sapiens) 6480464 Tretinoin results in decreased expression of LRAT mRNA CTD PMID:21934132 Lrat Mouse all-trans-retinoic acid multiple interactions ISO Lrat (Rattus norvegicus) 6480464 [Tetrachlorodibenzodioxin results in increased activity of LRAT protein] which results in increased chemical synthesis of Tretinoin CTD PMID:11097864 Lrat Mouse all-trans-retinol multiple interactions ISO LRAT (Homo sapiens) 6480464 [STRA6 protein co-treated with LRAT protein] results in increased uptake of Vitamin A CTD PMID:18316031 Lrat Mouse all-trans-retinol decreases expression EXP 6480464 Vitamin A results in decreased expression of LRAT mRNA CTD PMID:30944279 Lrat Mouse all-trans-retinol affects expression ISO Lrat (Rattus norvegicus) 6480464 Vitamin A affects the expression of LRAT mRNA CTD PMID:12576510 Lrat Mouse all-trans-retinol increases expression EXP 6480464 Vitamin A results in increased expression of LRAT mRNA CTD PMID:16292751 Lrat Mouse all-trans-retinol multiple interactions EXP 6480464 [Vitamin A co-treated with Tetrachlorodibenzodioxin] results in increased expression of LRAT mRNA and Tetrachlorodibenzodioxin inhibits the reaction [Vitamin A results in increased expression of LRAT mRNA] CTD PMID:16292751 Lrat Mouse ammonium chloride affects expression ISO Lrat (Rattus norvegicus) 6480464 Ammonium Chloride affects the expression of LRAT mRNA CTD PMID:16483693 Lrat Mouse arachidonic acid increases expression ISO Lrat (Rattus norvegicus) 6480464 Arachidonic Acid results in increased expression of LRAT mRNA CTD PMID:12576510 Lrat Mouse aristolochic acid A decreases expression ISO LRAT (Homo sapiens) 6480464 aristolochic acid I results in decreased expression of LRAT mRNA CTD PMID:33212167 Lrat Mouse arotinoid acid increases expression ISO Lrat (Rattus norvegicus) 6480464 4-(2-(5 more ... CTD PMID:12576510 Lrat Mouse benzo[a]pyrene increases expression ISO LRAT (Homo sapiens) 6480464 Benzo(a)pyrene results in increased expression of LRAT mRNA CTD PMID:22316170 Lrat Mouse benzo[a]pyrene increases methylation ISO LRAT (Homo sapiens) 6480464 Benzo(a)pyrene results in increased methylation of LRAT promoter CTD PMID:27901495 Lrat Mouse benzo[a]pyrene increases expression EXP 6480464 Benzo(a)pyrene results in increased expression of LRAT mRNA CTD PMID:22610609 Lrat Mouse beta-naphthoflavone multiple interactions ISO Lrat (Rattus norvegicus) 6480464 [Diethylnitrosamine co-treated with beta-Naphthoflavone] results in increased expression of LRAT mRNA CTD PMID:18164116 Lrat Mouse bisphenol A multiple interactions ISO Lrat (Rattus norvegicus) 6480464 [bisphenol A co-treated with Testosterone] results in decreased expression of LRAT mRNA CTD PMID:26496021 Lrat Mouse bisphenol A increases expression EXP 6480464 bisphenol A results in increased expression of LRAT mRNA CTD PMID:35598803 Lrat Mouse bisphenol A decreases expression ISO Lrat (Rattus norvegicus) 6480464 bisphenol A results in decreased expression of LRAT mRNA CTD PMID:34947998 Lrat Mouse bisphenol A multiple interactions EXP 6480464 [LRAT gene mutant form affects the susceptibility to [bisphenol A co-treated with retinol acetate]] which results in decreased expression of CYP2C39 mRNA more ... CTD PMID:28123100 Lrat Mouse bisphenol A affects response to substance EXP 6480464 LRAT gene mutant form affects the susceptibility to bisphenol A CTD PMID:28123100 Lrat Mouse bisphenol A affects expression ISO Lrat (Rattus norvegicus) 6480464 bisphenol A affects the expression of LRAT mRNA CTD PMID:25181051 Lrat Mouse bisphenol F increases expression EXP 6480464 bisphenol F results in increased expression of LRAT mRNA CTD PMID:38685157 Lrat Mouse buspirone decreases expression ISO Lrat (Rattus norvegicus) 6480464 Buspirone results in decreased expression of LRAT mRNA CTD PMID:24136188 Lrat Mouse cadmium dichloride decreases expression ISO LRAT (Homo sapiens) 6480464 Cadmium Chloride results in decreased expression of LRAT mRNA CTD PMID:38568856 Lrat Mouse captan decreases expression EXP 6480464 Captan results in decreased expression of LRAT mRNA CTD PMID:31558096 Lrat Mouse carbon nanotube affects expression EXP 6480464 Nanotubes and Carbon analog affects the expression of LRAT mRNA CTD PMID:25554681 Lrat Mouse carbon nanotube decreases expression EXP 6480464 Nanotubes more ... CTD PMID:25554681 and PMID:25620056 Lrat Mouse CGP 52608 multiple interactions ISO LRAT (Homo sapiens) 6480464 CGP 52608 promotes the reaction [RORA protein binds to LRAT gene] CTD PMID:28238834 Lrat Mouse chloroprene decreases expression EXP 6480464 Chloroprene results in decreased expression of LRAT mRNA CTD PMID:23125180 Lrat Mouse chlorpyrifos increases expression EXP 6480464 Chlorpyrifos results in increased expression of LRAT mRNA CTD PMID:32715474 Lrat Mouse clorgyline increases expression ISO LRAT (Homo sapiens) 6480464 Clorgyline results in increased expression of LRAT mRNA CTD PMID:19691856 Lrat Mouse cyproconazole decreases expression EXP 6480464 cyproconazole results in decreased expression of LRAT mRNA CTD PMID:22334560 Lrat Mouse dibenz[a,h]anthracene increases expression EXP 6480464 1 more ... CTD PMID:26377693 Lrat Mouse diethylstilbestrol increases expression ISO Lrat (Rattus norvegicus) 6480464 Diethylstilbestrol results in increased expression of LRAT mRNA CTD PMID:21658437 Lrat Mouse dimethylarsinic acid decreases expression ISO Lrat (Rattus norvegicus) 6480464 Cacodylic Acid results in decreased expression of LRAT mRNA CTD PMID:37567419 Lrat Mouse dioxygen multiple interactions EXP 6480464 [NFE2L2 protein affects the susceptibility to Oxygen] which affects the expression of LRAT mRNA CTD PMID:30529165 Lrat Mouse dopamine increases expression ISO Lrat (Rattus norvegicus) 6480464 Dopamine results in increased expression of LRAT mRNA CTD PMID:21983523 Lrat Mouse dorsomorphin multiple interactions ISO LRAT (Homo sapiens) 6480464 [NOG protein co-treated with Phenylmercuric Acetate co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of LRAT mRNA CTD PMID:27188386 Lrat Mouse entinostat increases expression ISO LRAT (Homo sapiens) 6480464 entinostat results in increased expression of LRAT mRNA CTD PMID:27188386 Lrat Mouse epoxiconazole decreases expression EXP 6480464 epoxiconazole results in decreased expression of LRAT mRNA CTD PMID:22334560 Lrat Mouse ethanol multiple interactions ISO LRAT (Homo sapiens) 6480464 [Ethanol co-treated with Folic Acid] results in increased expression of LRAT mRNA CTD PMID:23378141 Lrat Mouse ethanol increases expression ISO LRAT (Homo sapiens) 6480464 Ethanol results in increased expression of LRAT mRNA CTD PMID:23378141 and PMID:28986285 Lrat Mouse fenoldopam increases expression ISO Lrat (Rattus norvegicus) 6480464 Fenoldopam results in increased expression of LRAT mRNA CTD PMID:21983523 Lrat Mouse fenthion increases expression EXP 6480464 Fenthion results in increased expression of LRAT mRNA CTD PMID:34813904 Lrat Mouse folic acid multiple interactions ISO LRAT (Homo sapiens) 6480464 [Ethanol co-treated with Folic Acid] results in increased expression of LRAT mRNA CTD PMID:23378141 Lrat Mouse folpet decreases expression EXP 6480464 folpet results in decreased expression of LRAT mRNA CTD PMID:31558096 Lrat Mouse furan increases expression ISO Lrat (Rattus norvegicus) 6480464 furan results in increased expression of LRAT mRNA CTD PMID:25539665 more ... Lrat Mouse furan decreases methylation ISO Lrat (Rattus norvegicus) 6480464 furan results in decreased methylation of LRAT gene CTD PMID:27387713 Lrat Mouse glafenine decreases expression ISO Lrat (Rattus norvegicus) 6480464 Glafenine results in decreased expression of LRAT mRNA CTD PMID:24136188 Lrat Mouse glyphosate increases expression EXP 6480464 Glyphosate results in increased expression of LRAT mRNA CTD PMID:33713393 Lrat Mouse iron dichloride decreases expression ISO LRAT (Homo sapiens) 6480464 ferrous chloride results in decreased expression of LRAT mRNA CTD PMID:35984750 Lrat Mouse isoprenaline decreases expression EXP 6480464 Isoproterenol results in decreased expression of LRAT mRNA CTD PMID:20003209 Lrat Mouse isotretinoin increases expression ISO LRAT (Homo sapiens) 6480464 Isotretinoin results in increased expression of LRAT protein CTD PMID:15982314 Lrat Mouse linoleic acid increases expression ISO Lrat (Rattus norvegicus) 6480464 Linoleic Acid results in increased expression of LRAT mRNA CTD PMID:12576510 Lrat Mouse manganese atom increases expression ISO Lrat (Rattus norvegicus) 6480464 Manganese results in increased expression of LRAT mRNA CTD PMID:26745496 Lrat Mouse manganese(0) increases expression ISO Lrat (Rattus norvegicus) 6480464 Manganese results in increased expression of LRAT mRNA CTD PMID:26745496 Lrat Mouse manganese(II) chloride increases expression ISO Lrat (Rattus norvegicus) 6480464 manganese chloride results in increased expression of LRAT mRNA CTD PMID:26745496 Lrat Mouse methidathion increases expression EXP 6480464 methidathion results in increased expression of LRAT mRNA CTD PMID:34813904 Lrat Mouse mono(2-ethylhexyl) phthalate multiple interactions EXP 6480464 [mono-(2-ethylhexyl)phthalate co-treated with Tretinoin] results in increased expression of LRAT mRNA CTD PMID:36189433 Lrat Mouse Muraglitazar increases expression ISO Lrat (Rattus norvegicus) 6480464 muraglitazar results in increased expression of LRAT mRNA CTD PMID:21515302 Lrat Mouse N-nitrosodiethylamine increases response to substance EXP 6480464 LRAT protein results in increased susceptibility to Diethylnitrosamine CTD PMID:21278145 Lrat Mouse N-nitrosodiethylamine decreases expression EXP 6480464 Diethylnitrosamine results in decreased expression of LRAT mRNA CTD PMID:24535843 Lrat Mouse N-nitrosodiethylamine multiple interactions EXP 6480464 [Diethylnitrosamine co-treated with Phenobarbital] results in decreased expression of LRAT mRNA CTD PMID:24535843 Lrat Mouse N-nitrosodiethylamine multiple interactions ISO Lrat (Rattus norvegicus) 6480464 [Diethylnitrosamine co-treated with beta-Naphthoflavone] results in increased expression of LRAT mRNA CTD PMID:18164116 Lrat Mouse N-nitrosodimethylamine decreases expression ISO Lrat (Rattus norvegicus) 6480464 Dimethylnitrosamine results in decreased expression of LRAT mRNA CTD PMID:25380136 Lrat Mouse nefazodone decreases expression ISO Lrat (Rattus norvegicus) 6480464 nefazodone results in decreased expression of LRAT mRNA CTD PMID:24136188 Lrat Mouse nickel sulfate decreases expression EXP 6480464 nickel sulfate results in decreased expression of LRAT mRNA CTD PMID:16100012 Lrat Mouse nimesulide decreases expression ISO Lrat (Rattus norvegicus) 6480464 nimesulide results in decreased expression of LRAT mRNA CTD PMID:24136188 Lrat Mouse nitrofen increases expression ISO Lrat (Rattus norvegicus) 6480464 nitrofen results in increased expression of LRAT mRNA and nitrofen results in increased expression of LRAT protein CTD PMID:24972641 and PMID:33484710 Lrat Mouse nitrofen decreases expression ISO Lrat (Rattus norvegicus) 6480464 nitrofen results in decreased expression of LRAT mRNA CTD PMID:17203325 and PMID:26720608 Lrat Mouse ozone decreases expression ISO Lrat (Rattus norvegicus) 6480464 Ozone results in decreased expression of LRAT mRNA CTD PMID:35737395 Lrat Mouse paracetamol affects expression EXP 6480464 Acetaminophen affects the expression of LRAT mRNA CTD PMID:17562736 Lrat Mouse perfluorooctane-1-sulfonic acid decreases expression ISO LRAT (Homo sapiens) 6480464 perfluorooctane sulfonic acid results in decreased expression of LRAT mRNA CTD PMID:27153767 Lrat Mouse phenobarbital multiple interactions EXP 6480464 [Diethylnitrosamine co-treated with Phenobarbital] results in decreased expression of LRAT mRNA CTD PMID:24535843 Lrat Mouse phenobarbital decreases expression EXP 6480464 Phenobarbital results in decreased expression of LRAT mRNA CTD PMID:23091169 Lrat Mouse phenylmercury acetate multiple interactions ISO LRAT (Homo sapiens) 6480464 [NOG protein co-treated with Phenylmercuric Acetate co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of LRAT mRNA CTD PMID:27188386 Lrat Mouse pirinixic acid decreases expression EXP 6480464 pirinixic acid results in decreased expression of LRAT mRNA CTD PMID:18445702 Lrat Mouse potassium dichromate affects expression EXP 6480464 Potassium Dichromate affects the expression of LRAT mRNA CTD PMID:23608068 Lrat Mouse propiconazole decreases expression EXP 6480464 propiconazole results in decreased expression of LRAT mRNA CTD PMID:22334560 Lrat Mouse resveratrol multiple interactions ISO LRAT (Homo sapiens) 6480464 [Plant Extracts co-treated with Resveratrol] results in decreased expression of LRAT mRNA CTD PMID:23557933 Lrat Mouse retinyl acetate multiple interactions EXP 6480464 [LRAT gene mutant form affects the susceptibility to [bisphenol A co-treated with retinol acetate]] which results in decreased expression of CYP2C39 mRNA more ... CTD PMID:24614237 and PMID:28123100 Lrat Mouse rotenone decreases expression ISO Lrat (Rattus norvegicus) 6480464 Rotenone results in decreased expression of LRAT mRNA CTD PMID:28374803 Lrat Mouse SB 431542 multiple interactions ISO LRAT (Homo sapiens) 6480464 [NOG protein co-treated with Phenylmercuric Acetate co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of LRAT mRNA CTD PMID:27188386 Lrat Mouse silicon dioxide decreases expression EXP 6480464 Silicon Dioxide results in decreased expression of LRAT mRNA CTD PMID:23221170 and PMID:29341224 Lrat Mouse silicon dioxide decreases expression ISO LRAT (Homo sapiens) 6480464 Silicon Dioxide results in decreased expression of LRAT mRNA CTD PMID:25351596 Lrat Mouse sodium arsenite increases expression EXP 6480464 sodium arsenite results in increased expression of LRAT mRNA CTD PMID:32068019 Lrat Mouse sodium arsenite decreases expression EXP 6480464 sodium arsenite results in decreased expression of LRAT mRNA CTD PMID:37682722 Lrat Mouse sodium dichromate increases expression ISO Lrat (Rattus norvegicus) 6480464 sodium bichromate results in increased expression of LRAT mRNA CTD PMID:22561333 Lrat Mouse sunitinib increases expression ISO LRAT (Homo sapiens) 6480464 Sunitinib results in increased expression of LRAT mRNA CTD PMID:31533062 Lrat Mouse testosterone multiple interactions ISO Lrat (Rattus norvegicus) 6480464 [bisphenol A co-treated with Testosterone] results in decreased expression of LRAT mRNA CTD PMID:26496021 Lrat Mouse tetrachloroethene increases expression EXP 6480464 Tetrachloroethylene results in increased expression of LRAT mRNA CTD PMID:28973375 Lrat Mouse tetrachloromethane increases expression EXP 6480464 Carbon Tetrachloride results in increased expression of LRAT mRNA CTD PMID:27339419 Lrat Mouse tetrachloromethane affects expression EXP 6480464 Carbon Tetrachloride affects the expression of LRAT mRNA CTD PMID:31919559 Lrat Mouse tetrachloromethane decreases expression ISO Lrat (Rattus norvegicus) 6480464 Carbon Tetrachloride results in decreased expression of LRAT mRNA CTD PMID:31150632 Lrat Mouse tetrachloromethane multiple interactions ISO Lrat (Rattus norvegicus) 6480464 schizandrin B inhibits the reaction [Carbon Tetrachloride results in decreased expression of LRAT mRNA] CTD PMID:31150632 Lrat Mouse thioacetamide multiple interactions EXP 6480464 retinol acetate inhibits the reaction [LRAT gene mutant form results in decreased susceptibility to Thioacetamide] CTD PMID:24614237 Lrat Mouse thioacetamide decreases response to substance EXP 6480464 LRAT gene mutant form results in decreased susceptibility to Thioacetamide CTD PMID:24614237 Lrat Mouse titanium dioxide decreases expression EXP 6480464 titanium dioxide results in decreased expression of LRAT mRNA CTD PMID:23557971 and PMID:27760801 Lrat Mouse titanium dioxide decreases methylation EXP 6480464 titanium dioxide results in decreased methylation of LRAT promoter CTD PMID:35295148 Lrat Mouse titanium dioxide decreases expression ISO Lrat (Rattus norvegicus) 6480464 titanium dioxide results in decreased expression of LRAT mRNA CTD PMID:30012374 Lrat Mouse trichloroethene decreases expression EXP 6480464 Trichloroethylene results in decreased expression of LRAT mRNA CTD PMID:25549359 Lrat Mouse trichloroethene increases expression EXP 6480464 Trichloroethylene results in increased expression of LRAT mRNA CTD PMID:28973375 Lrat Mouse triclosan decreases expression ISO LRAT (Homo sapiens) 6480464 Triclosan results in decreased expression of LRAT mRNA CTD PMID:30510588 Lrat Mouse triphenyl phosphate decreases expression ISO Lrat (Rattus norvegicus) 6480464 triphenyl phosphate results in decreased expression of LRAT mRNA CTD PMID:30589522 Lrat Mouse troglitazone increases expression ISO Lrat (Rattus norvegicus) 6480464 troglitazone results in increased expression of LRAT mRNA CTD PMID:21515302 Lrat Mouse valdecoxib decreases expression ISO Lrat (Rattus norvegicus) 6480464 valdecoxib results in decreased expression of LRAT mRNA CTD PMID:24136188 Lrat Mouse valproic acid affects expression EXP 6480464 Valproic Acid affects the expression of LRAT mRNA CTD PMID:17963808 Lrat Mouse valproic acid increases expression ISO LRAT (Homo sapiens) 6480464 Valproic Acid results in increased expression of LRAT mRNA CTD PMID:23179753 more ... Lrat Mouse valproic acid affects expression ISO LRAT (Homo sapiens) 6480464 Valproic Acid affects the expression of LRAT mRNA CTD PMID:25979313 Lrat Mouse vinclozolin increases expression ISO Lrat (Rattus norvegicus) 6480464 vinclozolin results in increased expression of LRAT mRNA CTD PMID:23034163 Lrat Mouse zaragozic acid A decreases expression ISO Lrat (Rattus norvegicus) 6480464 squalestatin 1 results in decreased expression of LRAT mRNA CTD PMID:27225895 Lrat Mouse zaragozic acid A increases expression EXP 6480464 squalestatin 1 results in increased expression of LRAT mRNA CTD PMID:27225895
Imported Annotations - SMPDB
Imported Annotations - KEGG (archival)
(+)-schisandrin B (ISO) 1,1-dichloroethene (EXP) 1,2-dimethylhydrazine (EXP) 1-naphthyl isothiocyanate (ISO) 17alpha-ethynylestradiol (ISO) 17beta-estradiol (EXP,ISO) 2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO) 2,4-dibromophenyl 2,4,5-tribromophenyl ether (EXP) 2-bromohexadecanoic acid (ISO) 4,4'-diaminodiphenylmethane (ISO) 4,4'-sulfonyldiphenol (EXP) 4-hydroxyphenyl retinamide (EXP) aflatoxin B1 (ISO) all-trans-retinoic acid (EXP,ISO) all-trans-retinol (EXP,ISO) ammonium chloride (ISO) arachidonic acid (ISO) aristolochic acid A (ISO) arotinoid acid (ISO) benzo[a]pyrene (EXP,ISO) beta-naphthoflavone (ISO) bisphenol A (EXP,ISO) bisphenol F (EXP) buspirone (ISO) cadmium dichloride (ISO) captan (EXP) carbon nanotube (EXP) CGP 52608 (ISO) chloroprene (EXP) chlorpyrifos (EXP) clorgyline (ISO) cyproconazole (EXP) dibenz[a,h]anthracene (EXP) diethylstilbestrol (ISO) dimethylarsinic acid (ISO) dioxygen (EXP) dopamine (ISO) dorsomorphin (ISO) entinostat (ISO) epoxiconazole (EXP) ethanol (ISO) fenoldopam (ISO) fenthion (EXP) folic acid (ISO) folpet (EXP) furan (ISO) glafenine (ISO) glyphosate (EXP) iron dichloride (ISO) isoprenaline (EXP) isotretinoin (ISO) linoleic acid (ISO) manganese atom (ISO) manganese(0) (ISO) manganese(II) chloride (ISO) methidathion (EXP) mono(2-ethylhexyl) phthalate (EXP) Muraglitazar (ISO) N-nitrosodiethylamine (EXP,ISO) N-nitrosodimethylamine (ISO) nefazodone (ISO) nickel sulfate (EXP) nimesulide (ISO) nitrofen (ISO) ozone (ISO) paracetamol (EXP) perfluorooctane-1-sulfonic acid (ISO) phenobarbital (EXP) phenylmercury acetate (ISO) pirinixic acid (EXP) potassium dichromate (EXP) propiconazole (EXP) resveratrol (ISO) retinyl acetate (EXP) rotenone (ISO) SB 431542 (ISO) silicon dioxide (EXP,ISO) sodium arsenite (EXP) sodium dichromate (ISO) sunitinib (ISO) testosterone (ISO) tetrachloroethene (EXP) tetrachloromethane (EXP,ISO) thioacetamide (EXP) titanium dioxide (EXP,ISO) trichloroethene (EXP) triclosan (ISO) triphenyl phosphate (ISO) troglitazone (ISO) valdecoxib (ISO) valproic acid (EXP,ISO) vinclozolin (ISO) zaragozic acid A (EXP,ISO)
Biological Process
1,2-diacyl-sn-glycero-3-phosphocholine metabolic process (TAS) cellular response to leukemia inhibitory factor (IEP) lipid storage (IMP) positive regulation of lipid transport (IGI) response to bacterium (IEP) response to retinoic acid (IEA,ISO) response to vitamin A (IEA,ISO) retinoid metabolic process (IMP) retinol metabolic process (IBA,IEA,IGI,IMP,ISO,ISS) visual perception (IEA) vitamin A metabolic process (IBA,IDA,IMP)
1.
Genes and mutations causing retinitis pigmentosa.
Daiger SP, etal., Clin Genet. 2013 Aug;84(2):132-41. doi: 10.1111/cge.12203. Epub 2013 Jun 19.
2.
Mechanisms involved in the intestinal absorption of dietary vitamin A and provitamin A carotenoids.
Harrison EH Biochim Biophys Acta. 2012 Jan;1821(1):70-7. Epub 2011 Jun 12.
3.
Functional annotation of a full-length mouse cDNA collection.
Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
4.
Key enzymes of the retinoid (visual) cycle in vertebrate retina.
Kiser PD, etal., Biochim Biophys Acta. 2012 Jan;1821(1):137-51. Epub 2011 Apr 5.
5.
Electronic Transfer of Homolog Data
MGD and Homologene mouse data transfer
6.
MGDs mouse GO annotations
MGD data from the GO Consortium
7.
MGD IEA
MGD IEA
8.
Physiological insights into all-trans-retinoic acid biosynthesis.
Napoli JL Biochim Biophys Acta. 2012 Jan;1821(1):152-67. Epub 2011 May 19.
9.
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
10.
OMIM Disease Annotation Pipeline
OMIM Disease Annotation Pipeline
11.
KEGG Annotation Import Pipeline
Pipeline to import KEGG annotations from KEGG into RGD
12.
SMPDB Annotation Import Pipeline
Pipeline to import SMPDB annotations from SMPDB into RGD
13.
Mouse MP Annotation Import Pipeline
RGD automated import pipeline
14.
ClinVar Automated Import and Annotation Pipeline
RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
15.
Data Import for Chemical-Gene Interactions
RGD automated import pipeline for gene-chemical interactions
16.
Mutations in the gene encoding lecithin retinol acyltransferase are associated with early-onset severe retinal dystrophy.
Thompson DA, etal., Nat Genet. 2001 Jun;28(2):123-4.
17.
Photoreceptor degeneration: genetic and mechanistic dissection of a complex trait.
Wright AF, etal., Nat Rev Genet. 2010 Apr;11(4):273-84. doi: 10.1038/nrg2717.
18.
Acidic retinoids synergize with vitamin A to enhance retinol uptake and STRA6, LRAT, and CYP26B1 expression in neonatal lung.
Wu L and Ross AC, J Lipid Res. 2010 Feb;51(2):378-87. Epub 2009 Aug 20.
19.
Lecithin:retinol acyltransferase from mouse and rat liver. CDNA cloning and liver-specific regulation by dietary vitamin a and retinoic acid.
Zolfaghari R and Ross AC, J Lipid Res 2000 Dec;41(12):2024-34.
Lrat Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 3 82,799,889 - 82,811,281 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 3 82,799,886 - 82,811,280 (-) Ensembl GRCm39 Ensembl GRCm38 3 82,892,582 - 82,903,974 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 3 82,892,579 - 82,903,973 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 3 82,696,504 - 82,707,896 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 3 82,978,509 - 82,989,901 (-) NCBI MGSCv36 mm8 Celera 3 82,903,193 - 82,914,568 (-) NCBI Celera Cytogenetic Map 3 E3 NCBI cM Map 3 36.81 NCBI
LRAT Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 4 154,740,838 - 154,753,120 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 4 154,626,945 - 154,753,120 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 4 155,661,990 - 155,674,272 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 4 155,884,613 - 155,893,720 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 4 156,022,767 - 156,031,875 NCBI Celera 4 152,996,143 - 153,005,248 (+) NCBI Celera Cytogenetic Map 4 q32.1 NCBI HuRef 4 151,405,746 - 151,414,958 (+) NCBI HuRef CHM1_1 4 155,643,059 - 155,652,147 (+) NCBI CHM1_1 T2T-CHM13v2.0 4 158,072,645 - 158,084,927 (+) NCBI T2T-CHM13v2.0
Lrat Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 2 170,562,148 - 170,571,212 (-) NCBI GRCr8 mRatBN7.2 2 168,264,093 - 168,273,155 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 2 168,266,877 - 168,273,619 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 2 175,454,144 - 175,463,229 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 2 173,475,076 - 173,484,161 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 2 168,076,492 - 168,085,579 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 2 181,896,304 - 181,905,366 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 2 181,896,305 - 181,905,300 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 2 201,310,924 - 201,319,986 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 2 174,636,382 - 174,645,444 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 2 174,586,488 - 174,595,550 (-) NCBI Celera 2 162,290,825 - 162,299,887 (-) NCBI Celera Cytogenetic Map 2 q34 NCBI
Lrat Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955471 2,603,678 - 2,609,079 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955471 2,603,395 - 2,610,988 (+) NCBI ChiLan1.0 ChiLan1.0
LRAT Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 3 152,653,378 - 152,665,654 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 4 153,008,750 - 153,021,026 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 4 147,110,568 - 147,119,706 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 4 158,928,607 - 158,937,747 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 4 158,928,607 - 158,937,747 (+) Ensembl panpan1.1 panPan2
LRAT Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 15 52,399,773 - 52,409,590 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 15 52,399,544 - 52,406,176 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 15 52,744,532 - 52,752,466 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 15 53,086,516 - 53,094,290 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 15 53,087,735 - 53,096,027 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 15 52,341,249 - 52,349,017 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 15 52,447,030 - 52,454,972 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 15 52,762,096 - 52,769,963 (+) NCBI UU_Cfam_GSD_1.0
Lrat Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024405301 38,044,997 - 38,054,957 (-) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936576 1,492,297 - 1,501,917 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936576 1,491,480 - 1,498,568 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
LRAT Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 8 74,409,461 - 74,419,681 (-) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 8 74,412,226 - 74,428,713 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 8 78,710,192 - 78,726,673 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
LRAT Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 7 101,297,114 - 101,304,675 (+) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 7 101,297,691 - 101,302,520 (+) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666037 80,952,291 - 80,959,916 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Lrat
.
Predicted Target Of
Count of predictions: 1373 Count of miRNA genes: 657 Interacting mature miRNAs: 835 Transcripts: ENSMUST00000029632 Prediction methods: Miranda, Targetscan Result types: miRGate_prediction
4142399 Aec1_m autoimmune exocrinopathy 1 (mouse) Not determined 7586174 102690034 Mouse 26884378 Skwq6_m skull length QTL 6, 10 week (mouse) 3 51907421 102307316 Mouse 1301971 Cia5_m collagen induced arthritis QTL 5 (mouse) Not determined 3 66046658 100046795 Mouse 4141116 Lgaq4_m late growth adjusted QTL 4 (mouse) Not determined 10249221 83184946 Mouse 1301392 Eae3_m susceptibility to experimental allergic encephalomyelitis 3 (mouse) Not determined 3 79548730 113548837 Mouse 1301904 Iba2_m induction of brown adipocytes 2 (mouse) Not determined 3 82147043 116147184 Mouse 4141563 Lgq3_m late growth QTL 3 (mouse) Not determined 10249221 83184946 Mouse 1357584 Splq6_m spleen weight QTL 6 (mouse) Not determined 3 10249221 83184946 Mouse 26884382 Bzwq1_m bi-zygomatic width QTL 1, 5 week (mouse) 3 52207421 137205761 Mouse 1357585 Manln3_m mandible length 3 (mouse) Not determined 3 52625509 86625745 Mouse 26884380 Skwq1_m skull length QTL 1, 5 week (mouse) 3 43954435 101607316 Mouse 13464139 Nhdlq17_m non-HDL QTL 17 (mouse) 3 52923183 86923183 Mouse 25314313 Syncl1_m synaptonemal complex length 1 (mouse) 3 67907333 128393649 Mouse 1300895 Hdl5_m HDL level 5 (mouse) Not determined 3 49495005 83495118 Mouse 1301791 Char4_m P. chabaudi malaria resistance QTL 4 (mouse) Not determined 3 69625509 100655290 Mouse 11049572 Lmr11c_m leishmaniasis resistance 11c (mouse) 3 72139967 106140094 Mouse 26884436 Zlq3_m zygomatic length QTL 3, 10 week (mouse) 3 3265060 142405761 Mouse 1301917 Tshp4_m tooth shape 4 (mouse) Not determined 3 52625509 86625745 Mouse 26884427 Cvht4_m cranial vault height 4, 10 week (mouse) 3 16054164 109707316 Mouse 4141294 Bmd24_m bone mineral density 24 (mouse) Not determined 3 61740061 95740241 Mouse 1301824 Susp_m suppressor of superoxide production (mouse) Not determined 3 49495005 83495118 Mouse 1357440 Hrtpq1_m heart weight percentage QTL 1 (mouse) Not determined 3 10249221 83184946 Mouse 1301705 Sles3_m systemic lupus erythmatosus suppressor 3 (mouse) Not determined 3 37174862 143353183 Mouse 39128206 Lwq18_m liver weight QTL 18 (mouse) 3 10249221 83184946 Mouse 13207570 Tcq12_m total cholesterol QTL 12 (mouse) 3 16504164 130163649 Mouse 26884422 Cvht7_m cranial vault height 7, 16 week (mouse) 3 28954149 118893649 Mouse 1300595 Tmevd2_m Theiler's murine encephalomyelitis virus induced demyelinating disease susceptibility 2 (mouse) Not determined 3 75463302 109463549 Mouse 1300593 Skull4_m skull morphology 4 (mouse) Not determined 3 52625509 86625745 Mouse 11251721 Ewc3_m ethanol withdrawal and consumption 3 (mouse) 3 69568554 103568554 Mouse 1300982 Lmr11_m leishmaniasis resistance 11 (mouse) Not determined 3 72139967 106140094 Mouse 12880419 V125Dq4_m vitamin D active form serum level QTL 4 (mouse) 3 58907307 92907307 Mouse 4141079 Ath23_m atherosclerosis 23 (mouse) Not determined 49357581 83357581 Mouse 1301947 Pcfm3_m periosteal circumference and femur length 3 (mouse) Not determined 3 81084652 115084797 Mouse 11039519 Ltpr3_m Leishmania tropica response 3 (mouse) 3 56704102 100464137 Mouse 4141255 W10q3_m weight 10 weeks QTL 3 (mouse) Not determined 10249221 83184946 Mouse 1302056 Orgwq4_m organ weight QTL 4 (mouse) Not determined 3 30067588 147304689 Mouse 1301422 Sle11_m systematic lupus erythematosus susceptibility 11 (mouse) Not determined 3 70208904 104209042 Mouse 13208566 Bmiq5_m body mass index QTL 5 (mouse) 3 40954435 115793649 Mouse
BE197763
Mouse Assembly Chr Position (strand) Source JBrowse GRCm38 3 82,892,870 - 82,892,955 UniSTS GRCm38 MGSCv37 3 82,696,792 - 82,696,877 UniSTS GRCm37 Celera 3 82,903,481 - 82,903,566 UniSTS Cytogenetic Map 3 E3 UniSTS Whitehead/MRC_RH 3 824.37 UniSTS
AI449251
Mouse Assembly Chr Position (strand) Source JBrowse GRCm38 3 82,896,612 - 82,896,717 UniSTS GRCm38 MGSCv37 3 82,700,534 - 82,700,639 UniSTS GRCm37 Celera 3 82,907,223 - 82,907,328 UniSTS Cytogenetic Map 3 E3 UniSTS Whitehead/MRC_RH 3 810.08 UniSTS
Lrat
Mouse Assembly Chr Position (strand) Source JBrowse Cytogenetic Map 3 E3 UniSTS cM Map 3 UniSTS
Lrat
Mouse Assembly Chr Position (strand) Source JBrowse Cytogenetic Map 3 E3 UniSTS
Lrat
Mouse Assembly Chr Position (strand) Source JBrowse Cytogenetic Map 3 E3 UniSTS
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSMUST00000029632 ⟹ ENSMUSP00000029632
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 Ensembl 3 82,799,886 - 82,811,280 (-) Ensembl GRCm38.p6 Ensembl 3 82,892,579 - 82,903,973 (-) Ensembl
RefSeq Acc Id:
NM_023624 ⟹ NP_076113
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Mouse Assembly Chr Position (strand) Source GRCm39 3 82,799,889 - 82,811,281 (-) NCBI GRCm38 3 82,892,582 - 82,903,974 (-) ENTREZGENE MGSCv37 3 82,696,504 - 82,707,896 (-) RGD Celera 3 82,903,193 - 82,914,568 (-) RGD cM Map 3 ENTREZGENE
Sequence:
GAGCACCGCCCCCAGGCACACTACCTCTTCAGCTCCTCAAGCGCGGGTGCCACTGTTCCCACAGCCGACCGACACTACTTCCTTTCTTTGACCCCCTGCACTGGGTGGCTGAGCCAAGCACTTTGGCT
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RefSeq Acc Id:
NP_076113 ⟸ NM_023624
- UniProtKB:
Q9JI60 (UniProtKB/Swiss-Prot), B2RUR5 (UniProtKB/TrEMBL)
- Sequence:
MKNPMLEAASLLLEKLLLISNFKLFSVSVPGGGTGKNRPYEISSFVRGDVLEVSRTHFIHYGIYLGENRVAHLMPDILLALTNDKERTQKVVSNKRLLLGVICKVASIRVDTVEDFAYGADILVNHLD
hide sequence
Ensembl Acc Id:
ENSMUSP00000029632 ⟸ ENSMUST00000029632
RGD ID: 6834041 Promoter ID: MM_KWN:34679 Type: CpG-Island SO ACC ID: SO:0000170 Source: MPROMDB Tissues & Cell Lines: Liver Transcripts: OTTMUST00000072001, UC008PPB.1 Position: Mouse Assembly Chr Position (strand) Source MGSCv36 3 82,707,591 - 82,708,091 (-) MPROMDB
RGD ID: 6880966 Promoter ID: EPDNEW_M3934 Type: multiple initiation site Name: Lrat_1 Description: Mus musculus lecithin-retinol acyltransferase (phosphatidylcholine-retinol-O-acyltransferase), mRNA. SO ACC ID: SO:0000170 Source: EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/ ) Experiment Methods: Single-end sequencing. Position: Mouse Assembly Chr Position (strand) Source GRCm38 3 82,903,972 - 82,904,032 EPDNEW
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2024-08-26
Lrat
lecithin-retinol acyltransferase (phosphatidylcholine-retinol-O-acyltransferase)
1300010A18Rik
RIKEN cDNA 1300010A18 gene
Symbol and/or name updated
27372883 PROVISIONAL
2024-08-21
1300010A18Rik
RIKEN cDNA 1300010A18 gene
Lrat
lecithin-retinol acyltransferase (phosphatidylcholine-retinol-O-acyltransferase)
Symbol and/or name change
5135510 APPROVED
