ALTERED RETINOID CYCLE METABOLIC PATHWAY (PW:0001498)

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Description

Photoreceptor cells are susceptible to cellular stress - their degeneration and loss is a major cause of blindness. Many genes have identified for the inherited and highly heterogeneous disorders resulting from photoreceptor degeneration. One of the most common form is retinitis pigmentosa (RP) and its patterns of inheritance are varied - some are autosomal dominant (adRP), others are autosomal recessive (arRP), a smaller fraction are X-linked (XLRP) and between 30 to 50% have not yet been class

Pathway Diagram:

Elsevier Inc. phosphatidylcholine light --+> 11-cis-retinal Rdh12 11-cis-retinal ---> all-trans-retinal light 11-cis-retinal NADH NAD+ 11-cis-retinol retinyl ester retinol all-trans-retinal NADP+ NADPH ATP ADP Rbp1 ---- retinol 11-cis-retinal ---- cone opsins cone opsins Rdh8 Rbp1 Rdh10 Rdh5 Rdh11 NAD+ ---> NADH 11-cis-retinol ---> 11-cis-retinal NADPH ---> NADP+ all-trans-retinal ---> retinol Rlbp1 Abca4 Rbp3 Lrat Rpe65 11-cis-retinal ---- Rho visual phototransduction pathway Rho
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Genes in Pathway:

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altered retinoid cycle metabolic pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abca4 ATP binding cassette subfamily A member 4 JBrowse link 2 225,645,539 225,783,288 RGD:8547536
G Lrat lecithin retinol acyltransferase JBrowse link 2 181,896,304 181,905,366 RGD:8547536
G Rbp3 retinol binding protein 3 JBrowse link 16 10,277,775 10,286,243 RGD:8547536
G Rdh12 retinol dehydrogenase 12 JBrowse link 6 102,392,828 102,405,750 RGD:8547536
G Rlbp1 retinaldehyde binding protein 1 JBrowse link 1 141,097,789 141,111,375 RGD:8547536
G Rpe65 RPE65, retinoid isomerohydrolase JBrowse link 2 266,141,581 266,169,197 RGD:8547536

Pathway Gene Annotations

Disease Annotations Associated with Genes in the altered retinoid cycle metabolic pathway
Disease TermsGene Symbols
age related macular degeneration 2Abca4
Amaurosis Congenita of Leber, Type 2Rpe65
Autoimmune DiseasesRbp3
basal cell carcinomaRpe65
blindnessAbca4 , Rpe65
Bothnia Retinal DystrophyRlbp1
Carcinoma, Ductal, BreastLrat
Carcinoma, Squamous CellRpe65
Chemical and Drug Induced Liver InjuryLrat
Cleft LipAbca4
Colorectal NeoplasmsAbca4
cone dystrophyAbca4
cone-rod dystrophyAbca4
Cone-Rod Dystrophy 2Abca4
Cone-Rod Dystrophy 3Abca4
congenital stationary night blindnessAbca4 , Rbp3
diabetes mellitus, experimentalRpe65
eye diseaseRdh12
Eye Diseases, HereditaryLrat , Rlbp1 , Rpe65
Fundus AlbipunctatusRlbp1
Leber congenital amaurosisAbca4 , Lrat , Rdh12 , Rpe65
Leber Congenital Amaurosis 13Rdh12
Leber Congenital Amaurosis 14Lrat
Leber Congenital Amaurosis 3Rdh12
Liver Cirrhosis, ExperimentalLrat
Macular DegenerationAbca4
Macular Dystrophy, Concentric AnnularAbca4
mandibulofacial dysostosis with mental deficiencyAbca4
Newfoundland Rod-Cone DystrophyRlbp1
Night BlindnessRlbp1
Optic Atrophy, Hereditary, LeberLrat , Rdh12 , Rpe65
Peripheral Nervous System DiseasesAbca4
Retinal DegenerationAbca4 , Rdh12 , Rpe65
Retinal DystrophiesAbca4 , Lrat , Rbp3 , Rdh12 , Rlbp1 , Rpe65
retinal dystrophy, early onset severeAbca4
Retinitis PigmentosaAbca4 , Lrat , Rbp3 , Rdh12 , Rlbp1 , Rpe65
retinitis pigmentosa 19Abca4
Retinitis pigmentosa 20Rpe65
Retinitis Pigmentosa 66Rbp3
Stargardt diseaseAbca4
Stargardt disease 1Abca4
UveitisRbp3
Uveitis, Autoimmune, ExperimentalRpe65
Vision DisordersAbca4
Vitamin A DeficiencyLrat
Pathway Annotations Associated with Genes in the altered retinoid cycle metabolic pathway

References Associated with the altered retinoid cycle metabolic pathway:

Ontology Path Diagram:

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