Mpz (myelin protein zero) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Mpz (myelin protein zero) Rattus norvegicus
Analyze
Symbol: Mpz
Name: myelin protein zero
RGD ID: 3109
Description: Involved in negative regulation of apoptotic process. Located in basolateral plasma membrane. Biomarker of diabetic neuropathy and sciatic neuropathy. Human ortholog(s) of this gene implicated in Charcot-Marie-Tooth disease (multiple). Orthologous to human MPZ (myelin protein zero); INTERACTS WITH (20S)-20-hydroxypregn-4-en-3-one; 17beta-estradiol; 17beta-estradiol 3-benzoate.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: MPP; myelin peripheral protein; myelin protein P0; Myelin protein zero (Charcot-Marie-Tooth neuropathy 1B); P0
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81386,103,290 - 86,109,156 (+)NCBIGRCr8
mRatBN7.21383,570,811 - 83,576,680 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1383,570,811 - 83,576,679 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1386,076,519 - 86,082,418 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01387,474,755 - 87,480,657 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01384,706,501 - 84,712,211 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01389,524,204 - 89,530,070 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1389,524,329 - 89,530,068 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01394,151,850 - 94,156,749 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41387,040,479 - 87,045,378 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11387,229,362 - 87,234,262 (+)NCBI
Celera1383,202,202 - 83,207,991 (+)NCBICelera
Cytogenetic Map13q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MpzRatCharcot-Marie-Tooth disease  ISOMPZ (Homo sapiens)1358513 RGD 
MpzRatdiabetic neuropathy treatmentIEP 9685782associated with Diabetes Mellitus and ExperimentalRGD 
MpzRatsciatic neuropathy treatmentIEP 9685778 RGD 
1 to 20 of 34 rows
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MpzRatatrophic muscular disease  ISOMPZ (Homo sapiens)8554872ClinVar Annotator: match by term: Distal lower limb amyotrophyClinVarPMID:10545037 more ...
MpzRatautoimmune interstitial lung, joint, and kidney disease  ISOMPZ (Homo sapiens)8554872ClinVar Annotator: match by term: Autoimmune interstitial lung disease-arthritis syndromeClinVarPMID:28492532
MpzRatautosomal dominant distal hereditary motor neuronopathy 14  ISOMPZ (Homo sapiens)8554872ClinVar Annotator: match by term: Genetic motor neuron diseaseClinVarPMID:20571287 more ...
MpzRatautosomal dominant distal hereditary motor neuronopathy 2  ISOMPZ (Homo sapiens)8554872ClinVar Annotator: match by term: Distal hereditary motor neuropathy type 2ClinVarPMID:10071056 more ...
MpzRatCarney-Stratakis syndrome  ISOMPZ (Homo sapiens)8554872ClinVar Annotator: match by term: Paraganglioma and gastrointestinal stromal tumorClinVarPMID:12807974 more ...
MpzRatCharcot-Marie-Tooth disease  ISOMPZ (Homo sapiens)8554872ClinVar more ...ClinVarPMID:10071056 more ...
MpzRatCharcot-Marie-Tooth disease dominant intermediate D  ISOMPZ (Homo sapiens)8554872ClinVar more ...ClinVarPMID:10071056 more ...
MpzRatCharcot-Marie-Tooth disease intermediate type  ISOMPZ (Homo sapiens)8554872ClinVar Annotator: match by term: Charcot-Marie-Tooth and IntermediateClinVarPMID:12807974 more ...
MpzRatCharcot-Marie-Tooth disease type 1  ISOMPZ (Homo sapiens)8554872ClinVar more ...ClinVarPMID:10071056 more ...
MpzRatCharcot-Marie-Tooth disease type 1B  ISOMPZ (Homo sapiens)8554872ClinVar more ...ClinVarPMID:10071056 more ...
MpzRatCharcot-Marie-Tooth disease type 2I  ISOMPZ (Homo sapiens)8554872ClinVar more ...ClinVarPMID:10071056 more ...
MpzRatCharcot-Marie-Tooth disease type 2J  ISOMPZ (Homo sapiens)8554872ClinVar more ...ClinVarPMID:10071056 more ...
MpzRatCharcot-Marie-Tooth disease type 3  ISOMPZ (Homo sapiens)8554872ClinVar more ...ClinVarPMID:10084540 more ...
MpzRatCharcot-Marie-Tooth disease type 4E  ISOMPZ (Homo sapiens)8554872ClinVar more ...ClinVarPMID:10737979 more ...
MpzRatCharcot-Marie-Tooth Disease, Dominant Intermediate 3  ISOMPZ (Homo sapiens)8554872ClinVar Annotator: match by term: Charcot-Marie-Tooth disease dominant intermediate 3ClinVarPMID:10737979 more ...
MpzRatCongenital Hypomyelinating Neuropathy 2  ISOMPZ (Homo sapiens)8554872ClinVar Annotator: match by term: Neuropathy more ...ClinVarPMID:10319895 more ...
MpzRatdistal myopathy  ISOMPZ (Homo sapiens)8554872ClinVar Annotator: match by term: Distal muscle weaknessClinVarPMID:10545037 more ...
MpzRatgastrointestinal stromal tumor  ISOMPZ (Homo sapiens)8554872ClinVar more ...ClinVarPMID:12807974 more ...
MpzRatgenetic disease  ISOMPZ (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:10071056 more ...
MpzRatHereditary Neoplastic Syndromes  ISOMPZ (Homo sapiens)8554872ClinVar more ...ClinVarPMID:12807974 more ...
1 to 20 of 34 rows
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MpzRatCharcot-Marie-Tooth disease  ISOMPZ (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTD 
MpzRatCharcot-Marie-Tooth disease dominant intermediate D  ISOMPZ (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTD 
MpzRatCharcot-Marie-Tooth disease type 2I  ISOMPZ (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTD 
MpzRatCharcot-Marie-Tooth disease type 2J  ISOMPZ (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTD 
MpzRatHyperalgesia  ISOMPZ (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:16676325
MpzRatmotor peripheral neuropathy  ISOMPZ (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTD 
MpzRatNerve Degeneration  ISOMPZ (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:16676325
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MpzRatCharcot-Marie-Tooth disease type 1B  ISSMpz (Mus musculus)13592920OMIM:118200MouseDO 
MpzRatCharcot-Marie-Tooth disease type 3  ISSMpz (Mus musculus)13592920OMIM:145900MouseDO 
MpzRatneuropathy  ISSMpz (Mus musculus)13592920 MouseDO 
MpzRatPCWH syndrome  ISSMpz (Mus musculus)13592920OMIM:609136MouseDO 

1 to 20 of 73 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MpzRat(20S)-20-hydroxypregn-4-en-3-one multiple interactionsEXP 648046420-alpha-Dihydroprogesterone inhibits the reaction [Docetaxel results in decreased expression of MPZ mRNA] and 20-alpha-Dihydroprogesterone inhibits the reaction [Streptozocin results in decreased expression of MPZ mRNA]CTDPMID:17187935 and PMID:19335538
MpzRat(20S)-20-hydroxypregn-4-en-3-one increases expressionEXP 648046420-alpha-Dihydroprogesterone results in increased expression of MPZ mRNACTDPMID:16787508
MpzRat17beta-estradiol multiple interactionsEXP 6480464[estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in increased expression of MPZ mRNACTDPMID:32741896
MpzRat17beta-estradiol 3-benzoate multiple interactionsEXP 6480464[estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in increased expression of MPZ mRNACTDPMID:32741896
MpzRat2,3,7,8-tetrachlorodibenzodioxine affects expressionISOMpz (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of MPZ mRNACTDPMID:26377647
MpzRat2,3,7,8-tetrachlorodibenzodioxine affects expressionEXP 6480464Tetrachlorodibenzodioxin affects the expression of MPZ mRNACTDPMID:32109520
MpzRat3alpha-hydroxy-5beta-pregnan-20-one increases expressionEXP 6480464Pregnanolone results in increased expression of MPZ mRNACTDPMID:16787508
MpzRat4,4'-diaminodiphenylmethane decreases expressionISOMpz (Mus musculus)64804644 and 4'-diaminodiphenylmethane results in decreased expression of MPZ mRNACTDPMID:18648102
MpzRat4,4'-sulfonyldiphenol increases methylationISOMpz (Mus musculus)6480464bisphenol S results in increased methylation of MPZ exonCTDPMID:33297965
MpzRat4,4'-sulfonyldiphenol affects methylationISOMpz (Mus musculus)6480464bisphenol S affects the methylation of MPZ geneCTDPMID:31683443
MpzRat5-aminolevulinic acid decreases expressionEXP 6480464Aminolevulinic Acid results in decreased expression of MPZ proteinCTDPMID:18665889
MpzRatall-trans-retinoic acid decreases expressionISOMpz (Mus musculus)6480464Tretinoin results in decreased expression of MPZ mRNACTDPMID:37278767
MpzRatalpha-Zearalanol multiple interactionsEXP 6480464[Zeranol co-treated with perfluorooctanoic acid] affects the expression of MPZ mRNACTDPMID:35163327
MpzRatammonium chloride affects expressionEXP 6480464Ammonium Chloride affects the expression of MPZ mRNACTDPMID:16483693
MpzRatarsenous acid increases expressionISOMPZ (Homo sapiens)6480464Arsenic Trioxide results in increased expression of MPZ mRNACTDPMID:27829220
MpzRatatrazine decreases expressionEXP 6480464Atrazine results in decreased expression of MPZ mRNACTDPMID:36841081
MpzRatbenzo[a]pyrene decreases expressionISOMpz (Mus musculus)6480464Benzo(a)pyrene results in decreased expression of MPZ mRNACTDPMID:22228805
MpzRatbeta-lapachone increases expressionISOMPZ (Homo sapiens)6480464beta-lapachone results in increased expression of MPZ mRNACTDPMID:38218311
MpzRatbisphenol A affects expressionEXP 6480464bisphenol A affects the expression of MPZ mRNACTDPMID:25181051
MpzRatbisphenol A increases expressionISOMpz (Mus musculus)6480464bisphenol A results in increased expression of MPZ mRNACTDPMID:32156529

1 to 20 of 73 rows

Biological Process
1 to 14 of 14 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MpzRatcell aggregation involved_inISSUniProtKB:P251891600115GO_REF:0000024UniProtGO_REF:0000024
MpzRatcell aggregation involved_inISOMPZ (Homo sapiens)1624291 PMID:18337304RGDPMID:18337304
MpzRatcell aggregation involved_inIEAUniProtKB:P25189 and ensembl:ENSP000004329431600115GO_REF:0000107EnsemblGO_REF:0000107
MpzRatcell-cell adhesion via plasma-membrane adhesion molecules involved_inISSUniProtKB:P251891600115GO_REF:0000024UniProtGO_REF:0000024
MpzRatcell-cell adhesion via plasma-membrane adhesion molecules involved_inIBAPANTHER:PTN002676778 and UniProtKB:P251891600115GO_REF:0000033GO_CentralGO_REF:0000033
MpzRatcell-cell adhesion via plasma-membrane adhesion molecules involved_inISOMPZ (Homo sapiens)1624291 PMID:18337304RGDPMID:18337304
MpzRatcell-cell adhesion via plasma-membrane adhesion molecules involved_inIEAUniProtKB:P25189 and ensembl:ENSP000004329431600115GO_REF:0000107EnsemblGO_REF:0000107
MpzRatcell-cell junction maintenance acts_upstream_of_or_withinISOMpz (Mus musculus)1624291MGI:2384133 PMID:11749037RGDPMID:11749037
MpzRatmyelination involved_inISSUniProtKB:P251891600115GO_REF:0000024UniProtGO_REF:0000024
MpzRatmyelination acts_upstream_of_or_withinISOMpz (Mus musculus)1624291MGI:2384133 PMID:20731761RGDPMID:20731761
MpzRatmyelination involved_inIBAMGI:103177 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
MpzRatmyelination involved_inISOMPZ (Homo sapiens)1624291 PMID:10545037RGDPMID:10545037
MpzRatmyelination involved_inIEAUniProtKB:P25189 and ensembl:ENSP000004329431600115GO_REF:0000107EnsemblGO_REF:0000107
MpzRatnegative regulation of apoptotic process  IMP 9685779 RGD 
1 to 14 of 14 rows

Cellular Component
1 to 9 of 9 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MpzRatbasolateral plasma membrane  IDA 9685788 RGD 
MpzRatmembrane located_inIEAUniProtKB-KW:KW-04721600115GO_REF:0000043UniProtGO_REF:0000043
MpzRatmembrane located_inIEAInterPro:IPR0009201600115GO_REF:0000002InterProGO_REF:0000002
MpzRatplasma membrane located_inIEAUniProtKB-SubCell:SL-00391600115GO_REF:0000044UniProtGO_REF:0000044
MpzRatplasma membrane located_inIEAUniProtKB:P25189 and ensembl:ENSP000004329431600115GO_REF:0000107EnsemblGO_REF:0000107
MpzRatplasma membrane located_inIEAUniProtKB-KW:KW-10031600115GO_REF:0000043UniProtGO_REF:0000043
MpzRatplasma membrane is_active_inIBAMGI:106921 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
MpzRatplasma membrane located_inISOMPZ (Homo sapiens)1624291 PMID:18337304RGDPMID:18337304
MpzRatplasma membrane part_ofIMP 10047163PMID:10212299CACAO 
1 to 9 of 9 rows

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MpzRatprotein binding enablesISOMpz (Mus musculus)1624291UniProtKB:Q08460 and PMID:19423573RGDPMID:19423573


1 to 18 of 18 rows
#
Reference Title
Reference Citation
1. Two amino-acid substitutions in the myelin protein zero gene of a case of Charcot-Marie-Tooth disease associated with light-near dissociation. Bienfait HM, etal., Neuromuscul Disord 2002 Mar;12(3):281-5.
2. Diabetes-induced myelin abnormalities are associated with an altered lipid pattern: protective effects of LXR activation. Cermenati G, etal., J Lipid Res. 2012 Feb;53(2):300-10. doi: 10.1194/jlr.M021188. Epub 2011 Dec 7.
3. Cultured Schwann cells constitutively express the myelin protein P0. Cheng L and Mudge AW, Neuron. 1996 Feb;16(2):309-19.
4. Peripheral myelin protein 22 and protein zero: a novel association in peripheral nervous system myelin. D'Urso D, etal., J Neurosci. 1999 May 1;19(9):3396-403.
5. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
6. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
7. A dual tyrosine-leucine motif mediates myelin protein P0 targeting in MDCK cells. Kidd GJ, etal., Glia. 2006 Aug 1;54(2):135-45.
8. Mpz gene suppression by shRNA increases Schwann cell apoptosis in vitro. Lei L, etal., Neurol Sci. 2010 Oct;31(5):603-8. doi: 10.1007/s10072-010-0341-2. Epub 2010 Jun 15.
9. Isolation and sequence of a cDNA encoding the major structural protein of peripheral myelin. Lemke G and Axel R, Cell 1985 Mar;40(3):501-8.
10. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
11. An axonal form of Charcot-Marie-Tooth disease showing distinctive features in association with mutations in the peripheral myelin protein zero gene (Thr124Met or Asp75Val). Misu K, etal., J Neurol Neurosurg Psychiatry 2000 Dec;69(6):806-11.
12. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
13. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
14. GOA pipeline RGD automated data pipeline
15. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
16. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
17. Comprehensive gene review and curation RGD comprehensive gene curation
18. Electrical stimulation enhances peripheral nerve regeneration after crush injury in rats. Zhang X, etal., Mol Med Rep. 2013 May;7(5):1523-7. doi: 10.3892/mmr.2013.1395. Epub 2013 Mar 26.
1 to 18 of 18 rows
PMID:1690568   PMID:2483091   PMID:8816707   PMID:10545037   PMID:11726686   PMID:11749037   PMID:12477932   PMID:15207917   PMID:15456935   PMID:15580626   PMID:16493674   PMID:17325040  
PMID:18337304   PMID:20568451   PMID:20731761   PMID:21179557   PMID:22457349   PMID:22564491   PMID:29081003   PMID:31059078  



Mpz
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81386,103,290 - 86,109,156 (+)NCBIGRCr8
mRatBN7.21383,570,811 - 83,576,680 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1383,570,811 - 83,576,679 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1386,076,519 - 86,082,418 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01387,474,755 - 87,480,657 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01384,706,501 - 84,712,211 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01389,524,204 - 89,530,070 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1389,524,329 - 89,530,068 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01394,151,850 - 94,156,749 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41387,040,479 - 87,045,378 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11387,229,362 - 87,234,262 (+)NCBI
Celera1383,202,202 - 83,207,991 (+)NCBICelera
Cytogenetic Map13q24NCBI
MPZ
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381161,303,600 - 161,309,968 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1161,304,735 - 161,309,968 (-)EnsemblGRCh38hg38GRCh38
GRCh371161,274,525 - 161,279,758 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361159,541,151 - 159,546,377 (-)NCBINCBI36Build 36hg18NCBI36
Build 341158,087,599 - 158,092,817NCBI
Celera1134,341,666 - 134,346,903 (-)NCBICelera
Cytogenetic Map1q23.3NCBI
HuRef1132,631,395 - 132,636,601 (-)NCBIHuRef
CHM1_11162,670,753 - 162,675,990 (-)NCBICHM1_1
T2T-CHM13v2.01160,441,004 - 160,447,413 (-)NCBIT2T-CHM13v2.0
Mpz
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391170,978,282 - 170,988,699 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1170,978,280 - 170,988,699 (+)EnsemblGRCm39 Ensembl
GRCm381171,150,713 - 171,161,130 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1171,150,711 - 171,161,130 (+)EnsemblGRCm38mm10GRCm38
MGSCv371173,080,844 - 173,091,254 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361172,987,388 - 172,997,798 (+)NCBIMGSCv36mm8
Celera1173,598,959 - 173,609,357 (+)NCBICelera
Cytogenetic Map1H3NCBI
cM Map179.05NCBI
Mpz
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546813,041,011 - 13,047,284 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495546813,041,911 - 13,047,026 (-)NCBIChiLan1.0ChiLan1.0
MPZ
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2188,543,449 - 88,573,944 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1188,233,764 - 88,264,228 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01136,691,245 - 136,720,958 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11140,603,609 - 140,631,273 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1140,626,039 - 140,631,273 (-)Ensemblpanpan1.1panPan2
MPZ
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13821,205,339 - 21,210,439 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3821,205,107 - 21,210,451 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3821,280,251 - 21,285,323 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03821,323,207 - 21,328,277 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3821,323,098 - 21,328,270 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13821,220,355 - 21,225,416 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03821,626,466 - 21,631,518 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03822,034,738 - 22,039,792 (+)NCBIUU_Cfam_GSD_1.0
Mpz
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244050587,375,284 - 7,380,521 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936903583,942 - 589,160 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936903583,942 - 589,160 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MPZ
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl489,169,311 - 89,179,925 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1489,174,107 - 89,179,556 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2497,031,478 - 97,036,934 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MPZ
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1202,662,163 - 2,668,393 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl202,665,737 - 2,668,393 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660381,720,210 - 1,725,435 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mpz
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624794100,824 - 106,444 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624794101,095 - 106,508 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in Mpz
28 total Variants

Predicted Target Of
Summary Value
Count of predictions:110
Count of miRNA genes:90
Interacting mature miRNAs:101
Transcripts:ENSRNOT00000004279
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 24 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
7207885Glom27Glomerulus QTL 273.9kidney glomerulus integrity trait (VT:0010546)kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)1320605871101339738Rat
7387280Uae43Urinary albumin excretion QTL 435.690.4174urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1366451204106807694Rat
738027Lnnr6Liver neoplastic nodule remodeling QTL 63.3liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)137486211785581182Rat
1298066Bp159Blood pressure QTL 1590.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134608804691088046Rat
738026Lnnr5Liver neoplastic nodule remodeling QTL 53.29liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)135987440885581182Rat
10755495Bp387Blood pressure QTL 3873.78arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133466346187525369Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)133124133193395974Rat
2293702Bss34Bone structure and strength QTL 344.610.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)1365103704106807694Rat
1354621Rf47Renal function QTL 473.7kidney renin amount (VT:0010559)kidney renin level (CMO:0002166)1330395351101056920Rat
1354655Bp241Blood pressure QTL 2413.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1356056920101056920Rat

1 to 10 of 24 rows
RH129131  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21383,576,485 - 83,576,647 (+)MAPPERmRatBN7.2
Rnor_6.01389,529,876 - 89,530,037NCBIRnor6.0
Rnor_5.01394,157,377 - 94,157,538UniSTSRnor5.0
RGSC_v3.41387,046,006 - 87,046,167UniSTSRGSC3.4
Celera1383,207,797 - 83,207,958UniSTS
RH 3.4 Map13561.7UniSTS
Cytogenetic Map13q24-q25UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 105 59 58 27 25 27 6 184 97 85 43 60 31



Ensembl Acc Id: ENSRNOT00000004279   ⟹   ENSRNOP00000004279
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1383,570,811 - 83,576,679 (+)Ensembl
Rnor_6.0 Ensembl1389,524,329 - 89,530,068 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000109813   ⟹   ENSRNOP00000095879
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1383,573,143 - 83,576,679 (+)Ensembl
RefSeq Acc Id: NM_001314068   ⟹   NP_001300997
RefSeq Status: REVIEWED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81386,103,290 - 86,109,156 (+)NCBI
mRatBN7.21383,570,811 - 83,576,680 (+)NCBI
Rnor_6.01389,524,204 - 89,530,070 (+)NCBI
Celera1383,202,202 - 83,207,991 (+)NCBI
Sequence:
RefSeq Acc Id: NM_017027   ⟹   NP_058723
RefSeq Status: REVIEWED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81386,103,290 - 86,109,156 (+)NCBI
mRatBN7.21383,570,811 - 83,576,680 (+)NCBI
Rnor_6.01389,524,204 - 89,530,070 (+)NCBI
Rnor_5.01394,151,850 - 94,156,749 (+)NCBI
RGSC_v3.41387,040,479 - 87,045,378 (+)RGD
Celera1383,202,202 - 83,207,991 (+)NCBI
Sequence:
1 to 10 of 10 rows
Protein RefSeqs NP_001300997 (Get FASTA)   NCBI Sequence Viewer  
  NP_058723 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA41576 (Get FASTA)   NCBI Sequence Viewer  
  BAD83366 (Get FASTA)   NCBI Sequence Viewer  
  EDL94598 (Get FASTA)   NCBI Sequence Viewer  
  EDL94599 (Get FASTA)   NCBI Sequence Viewer  
  EDL94600 (Get FASTA)   NCBI Sequence Viewer  
  EDL94601 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000004279
GenBank Protein P06907 (Get FASTA)   NCBI Sequence Viewer  
1 to 10 of 10 rows
RefSeq Acc Id: NP_058723   ⟸   NM_017027
- Peptide Label: isoform MPZ precursor
- UniProtKB: P06907 (UniProtKB/Swiss-Prot),   A6JFU2 (UniProtKB/TrEMBL),   A0A8I6GLD0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001300997   ⟸   NM_001314068
- Peptide Label: isoform L-MPZ precursor
- Sequence:
Ensembl Acc Id: ENSRNOP00000004279   ⟸   ENSRNOT00000004279
Ensembl Acc Id: ENSRNOP00000095879   ⟸   ENSRNOT00000109813
Ig-like   Ig-like V-type

Name Modeler Protein Id AA Range Protein Structure
AF-P06907-F1-model_v2 AlphaFold P06907 1-248 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13698996
Promoter ID:EPDNEW_R9519
Type:single initiation site
Name:Mpz_1
Description:myelin protein zero
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01389,524,311 - 89,524,371EPDNEW


1 to 35 of 35 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-17387 BioCyc
Ensembl Genes ENSRNOG00000003171 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000004279 ENTREZGENE
Gene3D-CATH 2.60.40.10 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7121950 IMAGE-MGC_LOAD
InterPro Ig-like_dom UniProtKB/Swiss-Prot
  Ig-like_dom_sf UniProtKB/Swiss-Prot
  Ig-like_fold UniProtKB/Swiss-Prot
  Ig_sub UniProtKB/Swiss-Prot
  Ig_V-set UniProtKB/Swiss-Prot
  Myelin-PO_C UniProtKB/Swiss-Prot
  Myelin_P0-rel UniProtKB/Swiss-Prot
  Myelin_P0_CS UniProtKB/Swiss-Prot
  Myelin_P0_Ig-like UniProtKB/Swiss-Prot
KEGG Report rno:24564 UniProtKB/Swiss-Prot
MGC_CLONE MGC:93520 IMAGE-MGC_LOAD
NCBI Gene 24564 ENTREZGENE
PANTHER PTHR13869 UniProtKB/Swiss-Prot
  PTHR13869:SF7 UniProtKB/Swiss-Prot
Pfam Myelin-PO_C UniProtKB/Swiss-Prot
  V-set UniProtKB/Swiss-Prot
PhenoGen Mpz PhenoGen
PRINTS MYELINP0 UniProtKB/Swiss-Prot
PROSITE IG_LIKE UniProtKB/Swiss-Prot
  MYELIN_P0 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000003171 RatGTEx
SMART IGv UniProtKB/Swiss-Prot
  SM00409 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF48726 UniProtKB/Swiss-Prot
UniProt A0A8I6GLD0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8L2Q1P3_RAT UniProtKB/TrEMBL
  A6JFU2 ENTREZGENE, UniProtKB/TrEMBL
  A6JFU4_RAT UniProtKB/TrEMBL
  A6JFU5_RAT UniProtKB/TrEMBL
  MYP0_RAT UniProtKB/Swiss-Prot, ENTREZGENE
1 to 35 of 35 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2002-06-10 Mpz  Myelin protein zero (Charcot-Marie-Tooth neuropathy 1B)      Symbol and Name status set to approved 70586 APPROVED

Note Type Note Reference
gene_process may be involved in organizing formation of the myelin sheath 728953