Gluco63 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Gluco63 (Glucose level QTL 63) Rattus norvegicus

Symbol: Gluco63
Name: Glucose level QTL 63
RGD ID: 4889606
Trait: blood glucose amount   (VT:0000188)    
Measurement Type: blood glucose level area under curve (AUC)   (CMO:0000350)    
LOD Score: 2.86
P Value: 0.003
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21380,753,256 - 106,807,694RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01386,833,393 - 114,033,958RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01391,468,337 - 118,718,031RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41384,280,242 - 111,154,910RGDRGSC3.4
Cross Type: Not Available
Strains Crossed: CDR/Ygl CDS/Ygl 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
CDR/Ygl  (IEA)
CDS/Ygl  (IEA)

References

References - curated
# Reference Title Reference Citation
1. GENDER-SPECIFIC GENETIC DISSECTION OF DIABETES IN A RODENT MODEL IDENTIFIES ICA1 AND NDUFA4 AS MAJOR CANDIDATE GENES. Barkalifa R, etal., Physiol Genomics. 2010 Jun 8.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
41223721LOC120096430U2 spliceosomal RNA138101727081017344Rat
1591400Rpl7-ps4ribosomal protein L7, pseudogene 4138114052381143120Rat
9466182LOC103692065uncharacterized LOC103692065138123451881264218Rat
1307952Nuf2NUF2 component of NDC80 kinetochore complex138169367581722765Rat
2321067Timm23-ps7translocase of inner mitochondrial membrane 23, pseudogene 7138172285281799780Rat
3568Rgs5regulator of G-protein signaling 5138184825481885053Rat
3567Rgs4regulator of G-protein signaling 4138193677581943103Rat
1560672Ccdc190coiled-coil domain containing 190138214716182154863Rat
2837Hsd17b7hydroxysteroid (17-beta) dehydrogenase 7138217007982190018Rat
619855Ddr2discoidin domain receptor tyrosine kinase 2138219362382318229Rat
1561967Uap1UDP-N-acetylglucosamine pyrophosphorylase 1138234294682377558Rat
7568040LOC102549303uncharacterized LOC102549303138237765282378893Rat
2968Uhmk1U2AF homology motif kinase 1138239664682416292Rat
329845493LOC130014439uncharacterized LOC130014439138241637582427262Rat
1559938Smsl1spermine synthase like 1138243550082436942Rat
1589042Sh2d1b2SH2 domain containing 1B2138243741882461511Rat
1563935Sh2d1bSH2 domain containing 1B138248507682519401Rat
2320873C13h1orf226similar to human chromosome 1 open reading frame 226138253058982538676Rat
1565283Spata46spermatogenesis associated 46138254118382544808Rat
620106Nos1apnitric oxide synthase 1 adaptor protein138254779982820999Rat
41309715LOC120096313uncharacterized LOC120096313138263815382642859Rat
7749071LOC102550090uncharacterized LOC102550090138282110282823901Rat
1309257Olfml2bolfactomedin-like 2B138286941482906607Rat
1305471Atf6activating transcription factor 6138292757983106381Rat
41361058LOC120096368U6 spliceosomal RNA138307324083073344Rat
6491355LOC10091172840S ribosomal protein S27-like138308281783083112Rat
2318303LOC100362384ferritin light chain 1-like138311728083118226Rat
1589757Dnmt3b-ps2DNA methyltransferase 3B, pseudogene 2138311969683121858Rat
68375Dusp12dual specificity phosphatase 12138312219283131800Rat
41325170LOC120096314uncharacterized LOC120096314138313422883139869Rat
1563018FcrlbFc receptor-like B138314868583157157Rat
1306176FcrlaFc receptor-like A138316045383170170Rat
40978283LOC120096461U1 spliceosomal RNA138317561783175780Rat
631331Fcgr2bFc gamma receptor 2B138319125383207778Rat
1303067Fcgr3aFc gamma receptor 3A138324990583259921Rat
11462796Trnan-guu12transfer RNA asparagine (anticodon GUU) 12138326399683264069Rat
11386729Trnad-guc6transfer RNA aspartic acid (anticodon GUC) 6138326745483267525Rat
11426647Trnag-ucc4transfer RNA glycine (anticodon UCC) 4138326839183268462Rat
11519000Trnal-cag1transfer RNA leucine (anticodon CAG) 1138326898783269069Rat
1586661Hspa6l-ps1heat shock protein family A (Hsp70) member 6 like, pseudogene 1138327317683274317Rat
11448281Trnag-gcc3transfer RNA glycine (anticodon GCC) 3138327528383275353Rat
71069Fcgr2aFc gamma receptor 2A138328078283297535Rat
11506265Trnad-guc10transfer RNA aspartic acid (anticodon GUC) 10138329635683296427Rat
11469353Trnal-cag4transfer RNA leucine (anticodon CAG) 4138329701183297093Rat
1594388Fcgr2al1Fc gamma receptor 2A like 1138330287483315744Rat
11518338Trnad-guc11transfer RNA aspartic acid (anticodon GUC) 11138331617283316243Rat
11416840Trnal-cag5transfer RNA leucine (anticodon CAG) 5138331682683316908Rat
9127992Fcgr2a-ps1Fc gamma receptor 2A, pseudogene 1138332284083331714Rat
11518817Trnae-cuc6transfer RNA glutamic acid (anticodon CUC) 6138333736983337440Rat
11454395Trnag-ucc5transfer RNA glycine (anticodon UCC) 5138333787483337945Rat
11413703Trnad-guc7transfer RNA aspartic acid (anticodon GUC) 7138333841283338483Rat
11438814Trnal-cag2transfer RNA leucine (anticodon CAG) 2138333905983339141Rat
41338342Trnag-gcc14transfer RNA glycine (anticodon GCC) 14138334004783340117Rat
41246266Trnae-cuc12transfer RNA glutamic acid (anticodon CUC) 12138334636983346440Rat
11428758Trnag-ucc8transfer RNA glycine (anticodon UCC) 8138334688083346951Rat
41163880Trnad-guc15transfer RNA aspartic acid (anticodon GUC) 15138334741883347489Rat
41325826Trnal-cag12transfer RNA leucine (anticodon CAG) 12138334806583348147Rat
11395224Trnag-gcc6transfer RNA glycine (anticodon GCC) 6138334902583349095Rat
41362358Trnae-cuc13transfer RNA glutamic acid (anticodon CUC) 13138335533783355408Rat
41004142Trnag-ucctransfer RNA glycine (anticodon UCC)138335584883355919Rat
41007678Trnad-guctransfer RNA aspartic acid (anticodon GUC)138335638683356457Rat
41237828Trnad-guc17transfer RNA aspartic acid (anticodon GUC) 17138335638683356457Rat
41382661Trnal-cag14transfer RNA leucine (anticodon CAG) 14138335703383357115Rat
40984440Trnag-gcctransfer RNA glycine (anticodon GCC)138335798983358059Rat
40938478Trnae-cuctransfer RNA glutamic acid (anticodon CUC)138336428083364351Rat
41279699Trnae-cuc10transfer RNA glutamic acid (anticodon CUC) 10138336428083364351Rat
41213261Trnag-ucc9transfer RNA glycine (anticodon UCC) 9138336479183364862Rat
41381727Trnad-guc16transfer RNA aspartic acid (anticodon GUC) 16138336532983365400Rat
41104094Trnal-cagtransfer RNA leucine (anticodon CAG)138336597683366058Rat
41007014Trnag-gcc12transfer RNA glycine (anticodon GCC) 12138336693683367006Rat
41123084Trnae-cuc11transfer RNA glutamic acid (anticodon CUC) 11138337317683373247Rat
41228731Trnad-guc18transfer RNA aspartic acid (anticodon GUC) 18138337419883374269Rat
40938478Trnae-cuctransfer RNA glutamic acid (anticodon CUC)138346801183468081Rat
41274182Trnag-ucc10transfer RNA glycine (anticodon UCC) 10138346851583468586Rat
41231494Trnad-guc14transfer RNA aspartic acid (anticodon GUC) 14138346905583469126Rat
41306063Trnal-cag11transfer RNA leucine (anticodon CAG) 11138346970483469786Rat
40984440Trnag-gcctransfer RNA glycine (anticodon GCC)138347066283470732Rat
41352249Trnag-gcc13transfer RNA glycine (anticodon GCC) 13138347066283470732Rat
11518817Trnae-cuc6transfer RNA glutamic acid (anticodon CUC) 6138347712283477193Rat
11454395Trnag-ucc5transfer RNA glycine (anticodon UCC) 5138347762583477696Rat
11413703Trnad-guc7transfer RNA aspartic acid (anticodon GUC) 7138347816383478234Rat
41261179Trnal-cag10transfer RNA leucine (anticodon CAG) 10138347881183478893Rat
11457523Trnag-gcc4transfer RNA glycine (anticodon GCC) 4138347978283479852Rat
11400800Trnae-cuc7transfer RNA glutamic acid (anticodon CUC) 7138348618283486253Rat
11357429Trnag-ucc6transfer RNA glycine (anticodon UCC) 6138348668583486756Rat
41007678Trnad-guctransfer RNA aspartic acid (anticodon GUC)138348722383487294Rat
41219038Trnal-cag15transfer RNA leucine (anticodon CAG) 15138348787183487953Rat
11457523Trnag-gcc4transfer RNA glycine (anticodon GCC) 4138348881883488888Rat
11357429Trnag-ucc6transfer RNA glycine (anticodon UCC) 6138349574383495814Rat
11413331Trnad-guc8transfer RNA aspartic acid (anticodon GUC) 8138349636483496435Rat
11363202Trnag-gcc5transfer RNA glycine (anticodon GCC) 5138349969783499767Rat
2313878Znrd1-ps1zinc ribbon domain containing 1, pseudogene 1138351089583511537Rat
11387238Trnal-cag3transfer RNA leucine (anticodon CAG) 3138351451883514600Rat
11454394Trnad-guc9transfer RNA aspartic acid (anticodon GUC) 9138351507183515142Rat
11498207Trnag-ucc7transfer RNA glycine (anticodon UCC) 7138351557183515642Rat
11398805Trnae-cuc8transfer RNA glutamic acid (anticodon CUC) 8138351590383515974Rat
11388196Trnav-cac3transfer RNA valine (anticodon CAC) 3138352375883523830Rat
1562658Cfap126cilia and flagella associated protein 126138352665783542552Rat
4145546LOC100526655ribosomal protein L29 pseudogene138353173983532345Rat
1359454Sdhcsuccinate dehydrogenase complex subunit C138354465283565560Rat
3109Mpzmyelin protein zero138357081183576680Rat
1593809Pcp4l1Purkinje cell protein 4-like 1138358899283612631Rat
621400Nr1i3nuclear receptor subfamily 1, group I, member 3138363294083638193Rat
1562006Tomm40ltranslocase of outer mitochondrial membrane 40 like138363669283641654Rat
2131Apoa2apolipoprotein A2138364446083646358Rat
2599Fcer1gFc epsilon receptor Ig138364944783654248Rat
1307109Ndufs2NADH:ubiquinone oxidoreductase core subunit S2138365440283671474Rat
621242Adamts4ADAM metallopeptidase with thrombospondin type 1 motif, 4138367055683680045Rat
1359221B4galt3beta-1,4-galactosyltransferase 3138369137883697448Rat
1310543Ppoxprotoporphyrinogen oxidase138369766183701998Rat
1588822Usp21ubiquitin specific peptidase 21138370267283709215Rat
1303313Ufc1ubiquitin-fold modifier conjugating enzyme 1138370932983719762Rat
7700680Gng5-ps1G protein subunit gamma 5, pseudogene 1138372562883727878Rat
620050Dedddeath effector domain-containing138375587483769982Rat
727821Nit1nitrilase 1138376988883773324Rat
1591406Pfdn2prefoldin subunit 2138377230183791367Rat
1561025Klhdc9kelch domain containing 9138379039083794080Rat
1559826Nectin4nectin cell adhesion molecule 4138380258983821711Rat
1561419Arhgap30Rho GTPase activating protein 30138382229083843634Rat
620974Usf1upstream transcription factor 1138384523083854875Rat
2323815Tstd1thiosulfate sulfurtransferase like domain containing 1138385342183854875Rat
621842F11rF11 receptor138387379783897388Rat
2323611Ptmal5prothymosin alpha like 5138392072383922032Rat
41231914LOC120096440U5 spliceosomal RNA138393188183931996Rat
1561048Itln1intelectin 1138393223483958243Rat
1587602Mif-ps9macrophage migration inhibitory factor, pseudogene 9138396310983963614Rat
41389617LOC120093159natural killer cell receptor 2B4-like138397913484002215Rat
11402621LOC10835257260S ribosomal protein L31 pseudogene138400006884000983Rat
68400Cd244l1CD244 molecule like 1138401888784036612Rat
9330179Cd244CD244 molecule138405133984082864Rat
1308341Ly9lymphocyte antigen 9138407934584100783Rat
7671987LOC102549964uncharacterized LOC102549964138411882084129028Rat
1560190Slamf7SLAM family member 7138413565684154528Rat
9329753LOC103692286uncharacterized LOC103692286138415460084184860Rat
620620Cd48Cd48 molecule138418488484209144Rat
1560634Slamf1signaling lymphocytic activation molecule family member 1138427031684305497Rat
9431477LOC103692288uncharacterized LOC103692288138428700284325493Rat
1564553Cd84CD84 molecule138432758084367153Rat
1561848Slamf6SLAM family member 6138438456184405300Rat
1585268Rps15-ps16ribosomal protein S15, pseudogene 16138442131284421729Rat
1309442Vangl2VANGL planar cell polarity protein 2138446273184489404Rat
1310261Nhlh1nescient helix loop helix 1138451734784522548Rat
631418Ncstnnicastrin138453044284546454Rat
1310525CopaCOPI coat complex subunit alpha138454648384586879Rat
1306913Pex19peroxisomal biogenesis factor 19138459227784608793Rat
1308513Dcaf8DDB1 and CUL4 associated factor 8138460983884667025Rat
1306055Pea15proliferation and apoptosis adaptor protein 15138465781584667437Rat
1586677Casq1calsequestrin 1138467064884680339Rat
61952Atp1a4ATPase Na+/K+ transporting subunit alpha 4138468376684719790Rat
2168Atp1a2ATPase Na+/K+ transporting subunit alpha 2138472959784754544Rat
1311500Igsf8immunoglobulin superfamily, member 8138477034884781534Rat
621440Kcnj9potassium inwardly-rectifying channel, subfamily J, member 9138478082684787928Rat
61822Kcnj10potassium inwardly-rectifying channel, subfamily J, member 10138480202684835383Rat
71041Pigmphosphatidylinositol glycan anchor biosynthesis, class M138483832984842026Rat
9205262LOC103692291uncharacterized LOC103692291138487114684872631Rat
11355415LOC108352575uncharacterized LOC108352575138490018384924193Rat
11418586LOC108353436uncharacterized LOC108353436138492426084925715Rat
1305945Slamf9SLAM family member 9138494189684944749Rat
1304566Igsf9immunoglobulin superfamily, member 9138494864384965616Rat
1310840Tagln2transgelin 2138496698084973973Rat
1561559Cfap45cilia and flagella associated protein 45138498947485012880Rat
41061811LOC120096318uncharacterized LOC120096318138500516185018197Rat
1562464Vsig8V-set and immunoglobulin domain containing 8138502317785031364Rat
1306263Slamf8SLAM family member 8138504772985057571Rat
1563939Fcrl6Fc receptor-like 6138506270985072308Rat
1309202Dusp23dual specificity phosphatase 23138509789985100054Rat
2411CrpC-reactive protein138513538485175178Rat
11428601LOC10835262160S ribosomal protein L6 pseudogene138523853785250025Rat
11376557Rps29-ps16ribosomal protein S29, pseudogene 16138528463885284949Rat
1334438Or10as1-ps1olfactory receptor family 10 subfamily AS member 1, pseudogene 1138535825685359000Rat
68322Apcsamyloid P component, serum138537321985374195Rat
40960097LOC120096401small nucleolar RNA SNORA17138541292985413048Rat
11393231LOC108352577uncharacterized LOC108352577138542401185436529Rat
1333702Or10j5olfactory receptor family 10 subfamily J member 5138543065585431584Rat
1332837Or10at1-ps1olfactory receptor family 10 subfamily AT member 1, pseudogene 1138553163685532241Rat
1334126Olr1578-psolfactory receptor pseudogene 1578138554676985547308Rat
1332648Or10j27olfactory receptor family 10 subfamily J member 27138559008285591014Rat
1333029Or10j29-ps1olfactory receptor family 10 subfamily J member 29, pseudogene 1138560387185604691Rat
1332808Or10j7olfactory receptor family 10 subfamily J member 7138564779685648728Rat
1333672Or10j3olfactory receptor family 10 subfamily J member 3138566725485668195Rat
1333448Or10j3bolfactory receptor family 10 subfamily J member 3B138568058185681522Rat
2597Fcer1aFc epsilon receptor Ia138568609985692394Rat
1595361Or10j2olfactory receptor family 10 subfamily J member 2138572330085724290Rat
1590926Mptx1mucosal pentraxin 1138572798985731523Rat
1596198Ackr1atypical chemokine receptor 1138578239685784015Rat
1307035Cadm3cell adhesion molecule 3138578478585817412Rat
11355992Trnar-ucu5transfer RNA arginine (anticodon UCU) 5138583980485839877Rat
1307283Aim2absent in melanoma 2138586520685906996Rat
7636450LOC102556096pyrin domain-containing protein 3-like138591191585929491Rat
41107089Trnal-cag13transfer RNA leucine (anticodon CAG) 13138592234185922423Rat
1562462Ifi214interferon activated gene 214138594002885951004Rat
1306089Mndamyeloid cell nuclear differentiation antigen138601788886035556Rat
1334087Or10aa1olfactory receptor family 10 subfamily AA member 1138604615886052356Rat
1333297Olr1585olfactory receptor 1585138605849786063730Rat
1333649Or10aa1b-ps1olfactory receptor family 10 subfamily AA member 1B, pseudogene 1138606359486064132Rat
1334407Or10aa3olfactory receptor family 10 subfamily AA member 3138607555786076495Rat
1333597Or6n2olfactory receptor family 6 subfamily N member 2138607685786087100Rat
1334435Or6n1olfactory receptor family 6 subfamily N member 1138610691286107850Rat
1332994Or6k14olfactory receptor family 6 subfamily K member 14138611619286117139Rat
1332683Or6k14bolfactory receptor family 6 subfamily K member 14B138613614486137094Rat
1333957Or6k6olfactory receptor family 6 subfamily K member 6138614840286149325Rat
1332672Or6k4olfactory receptor family 6 subfamily K member 14B138616424486165191Rat
1332878Or6k3-ps1olfactory receptor family 6 subfamily K member 3, pseudogene 1138617194186172895Rat
1334338Or6k8olfactory receptor family 6 subfamily K member 8138618057986181526Rat
1333784Or6k2olfactory receptor family 6 subfamily K member 2138618644286190391Rat
1305194Spta1spectrin, alpha, erythrocytic 1138620350486279371Rat
1333906Or10z1olfactory receptor family 10 subfamily Z member 1138628153586282476Rat
1333675Or10x1bolfactory receptor family 10 subfamily X member 1B138629756086298492Rat
1333301Or10l2-ps1olfactory receptor family 10 subfamily L member 2, pseudogene 1138630589086307068Rat
1333184Or10x1olfactory receptor family 10 subfamily X member 1138631619586317124Rat
1332986Or6p1olfactory receptor family 6 subfamily P member 1138635189386352846Rat
1334224Or6y1olfactory receptor family 6 subfamily Y member 1138639338186394358Rat
1563410Actb-ps2actin, beta, pseudogene 2138644329486444338Rat
2322099Fmn2formin 2138645425686771437Rat
1560008Grem2gremlin 2, DAN family BMP antagonist138677854386871509Rat
7638368LOC102546489uncharacterized LOC102546489138689268886972975Rat
3570Rgs7regulator of G-protein signaling 7138697926987408834Rat
40968627LOC120096319uncharacterized LOC120096319138710074887123260Rat
6496245Morf4l1-ps4mortality factor 4 like 1, pseudogene 4138743320387434412Rat
41271470LOC120096320uncharacterized LOC120096320138746796387478899Rat
2614Fhfumarate hydratase138752433187550215Rat
620610Kmokynurenine 3-monooxygenase138755708087589334Rat
1594385Opn3opsin 3138758933387619847Rat
1596201ChmlCHM like Rab escort protein138760964787619868Rat
1591103Wdr64WD repeat domain 64138762458887746749Rat
9362824LOC103692323uncharacterized LOC103692323138765371987658671Rat
9333866LOC103692322uncharacterized LOC103692322138772815887735626Rat
41261293LOC120096392U2 spliceosomal RNA138773227287732452Rat
1561353Uba2-ps1ubiquitin-like modifier activating enzyme 2, pseudogene 1138775579687758435Rat
9460837LOC103692325uncharacterized LOC103692325138778452787809809Rat
1309465Exo1exonuclease 1138780972587834654Rat
1563293Becn2beclin 2138784298087892410Rat
1562609Pld5phospholipase D family, member 5138789569488232868Rat
41295681LOC120096415small nucleolar RNA SNORA17138799437287994492Rat
621868Cep170centrosomal protein 170138866967288754011Rat
2325611Mir350microRNA 350138871239888712496Rat
727781Sdccag8SHH signaling and ciliogenesis regulator SDCCAG8138875452188979363Rat
62390Akt3AKT serine/threonine kinase 3138894370889225831Rat
1562397Rpl30l1ribosomal protein L30-like 1138928168789284907Rat
40981362LOC120096321uncharacterized LOC120096321138935880089377727Rat
7673495LOC102549740uncharacterized LOC102549740138942446989439278Rat
621548Zbtb18zinc finger and BTB domain containing 18138943950189447958Rat
7691195LOC102549878uncharacterized LOC102549878138948838689495453Rat
7653714LOC102549965uncharacterized LOC102549965138955359889558715Rat
9298395LOC103692343uncharacterized LOC103692343138956760389575313Rat
41238847LOC120096323uncharacterized LOC120096323138973837389752791Rat
1588722Spmip3sperm microtubule inner protein 3138974046489771505Rat
1310508Adss2adenylosuccinate synthase 2138976924089799577Rat
1565309Catsperecatsper channel auxiliary subunit epsilon138979966989954723Rat
40959119LOC120096322uncharacterized LOC120096322138992917889946634Rat
1359392Desi2desumoylating isopeptidase 2138996176790011255Rat
41131750Rps16-ps3ribosomal protein S16, pseudogene 3139001338490018315Rat
1563812Btf3-ps1basic transcription factor 3, pseudogene 1139004478690045645Rat
1309105Cox20cytochrome c oxidase assembly factor COX20139006590090075386Rat
620372Hnrnpuheterogeneous nuclear ribonucleoprotein U139006905890086905Rat
11465002LOC10834831460S ribosomal protein L17 pseudogene139009473390095233Rat
41184906LOC120096462U6 spliceosomal RNA139013812990138225Rat
1308593Efcab2EF-hand calcium binding domain 2139015200290237918Rat
1560022Kif26bkinesin family member 26B139028282190689058Rat
7718070Eef1g-ps1eukaryotic translation elongation factor 1 gamma, pseudogene 1139033499290341052Rat
1562635Smyd3SET and MYND domain containing 3139070926391266209Rat
11366826LOC108352580uncharacterized LOC108352580139080557490808333Rat
11462416LOC108352579uncharacterized LOC108352579139081579490824767Rat
11510654Rpl23-ps6ribosomal protein L23,pseudogene 6139101746891042084Rat
1307091Tfb2mtranscription factor B2, mitochondrial139127888991296709Rat
1564833Cnstconsortin, connexin sorting protein139129674091373531Rat
11488972LOC108352581uncharacterized LOC108352581139135280591394807Rat
1311440Sccpdhsaccharopine dehydrogenase (putative)139140012091421875Rat
1559696Kif28kinesin family member 28139142752791482297Rat
1561291Ahctf1AT hook containing transcription factor 1139148193691536391Rat
621406Cdc42bpaCDC42 binding protein kinase alpha139168377591903732Rat
1308245Coq8acoenzyme Q8A139190473191933588Rat
621060Psen2presenilin 2139196750691993240Rat
7724593LOC102553289uncharacterized LOC102553289139201321792016178Rat
41280367LOC120096326uncharacterized LOC120096326139205149792054910Rat
2932Itpkbinositol-trisphosphate 3-kinase B139206916092164281Rat
11497111LOC108352582uncharacterized LOC108352582139209974692103608Rat
1592263Stumstum, mechanosensory transduction mediator homolog139217217592227205Rat
41205771LOC120096327uncharacterized LOC120096327139230484092307396Rat
2053Parp1poly (ADP-ribose) polymerase 1139230759392339406Rat
41317983LOC120096451U6 spliceosomal RNA139236488692364992Rat
1591104Lin9lin-9 DREAM MuvB core complex component139237461292419664Rat
40964154Trnap-uggtransfer RNA proline (anticodon UGG)139239874592398825Rat
1310011Mixl1Mix paired-like homeobox 1139242203192426065Rat
727851Acbd3acyl-CoA binding domain containing 3139245581392484556Rat
7505129LOC102553824uncharacterized LOC102553824139250550292509561Rat
2319910H3f3aH3.3 histone A139253328992544902Rat
1305572Sde2SDE2 telomere maintenance homolog139257884392595142Rat
1359679Lefty2Left-right determination factor 2139261018592620918Rat
1310074Pycr2pyrroline-5-carboxylate reductase 2139262646292630256Rat
1561867Lefty1left right determination factor 1139264922692659722Rat
1306829Tmem63atransmembrane protein 63a139266287292696186Rat
2557Ephx1epoxide hydrolase 1139271431592744105Rat
41190036LOC120096328uncharacterized LOC120096328139273240192734636Rat
1593185Degs1l1delta(4)-desaturase, sphingolipid 1 like 1139277265492818811Rat
9191316LOC103693688epoxide hydrolase 1-like139278113592789970Rat
7728602Rpl35-ps2ribosomal protein L35, pseudogene 2139279594192799355Rat
1564463Degs1l2delta(4)-desaturase, sphingolipid 1 like 2139283154992839257Rat
1311270Nvlnuclear VCP-like139285102392906749Rat
40994150LOC120096457U6 spliceosomal RNA139289763192897736Rat
1559740Cnih4cornichon family member 4139291031592926428Rat
1565589Wdr26WD repeat domain 26139293028292972061Rat
1582859Cnih3cornichon family AMPA receptor auxiliary protein 3139301670793208168Rat
1566190Ccdc121rt1coiled-coil domain containing 121, retrogene 1139325375293255419Rat
1582826Dnah14dynein axonemal heavy chain 14139332265393540706Rat
1582842Mrps11-ps1mitochondrial ribosomal protein S11, pseudogene 1139340788793409927Rat
620813Lbrlamin B receptor139353938693564026Rat
9288957LOC10369370060S ribosomal protein L36a-like139356684293574024Rat
1307666EnahENAH, actin regulator139361774793738119Rat
1597343Srp9signal recognition particle 9139383258093840720Rat
11493650LOC108352583uncharacterized LOC108352583139394255993946790Rat
70917Degs1delta(4)-desaturase, sphingolipid 1139394615493953677Rat
11499223LOC108352584uncharacterized LOC108352584139394752893960272Rat
1304584Fbxo28F-box protein 28139399599394021464Rat
1305461Tp53bp2tumor protein p53 binding protein, 2139408876994145436Rat
2268Capn2calpain 2139415024494200969Rat
7726144LOC102555308uncharacterized LOC102555308139416025694182046Rat
41177857LOC120096330uncharacterized LOC120096330139421343894214039Rat
40932098LOC120096331uncharacterized LOC120096331139422564994236264Rat
620085Capn8calpain 8139425221894316146Rat
1560145Ccdc185coiled-coil domain containing 185139443477294436784Rat
1564043Susd4sushi domain containing 4139445518094577773Rat
41106946LOC120096332uncharacterized LOC120096332139458072394589847Rat
40967216LOC120096379small nucleolar RNA SNORD113/SNORD114 family139459102394591101Rat
1598298Uba52-ps19ubiquitin A-52 residue ribosomal protein fusion product 1, pseudogene 19139462553494626396Rat
631351Tlr5toll-like receptor 5139463477894658992Rat
1307675Disp1dispatched RND transporter family member 1139472092894866695Rat
11387359LOC108352652uncharacterized LOC108352652139489631094898231Rat
11415168LOC108352653uncharacterized LOC108352653139490102094903107Rat
7728997Fam177bfamily with sequence similarity 177 member B139490412894909688Rat
11413181LOC10835262360S ribosomal protein L7a pseudogene139491521494918192Rat
1307161BroxBRO1 domain and CAAX motif containing139492010794940189Rat
1592746Aidaaxin interactor, dorsalization associated139494031194967920Rat
40973315LOC120096334uncharacterized LOC120096334139495358994958141Rat
41229627LOC120096335uncharacterized LOC120096335139496264094966002Rat
1591600Mia3MIA SH3 domain ER export factor 3139497042195012071Rat
11519740LOC108352586uncharacterized LOC108352586139498812294992718Rat
1305698Taf1aTATA-box binding protein associated factor, RNA polymerase I subunit A139501216095048131Rat
41271103Pin4-ps4peptidylprolyl cis/trans isomerase, NIMA-interacting 4, pseudogene 4139501361295015487Rat
41267220LOC120096336uncharacterized LOC120096336139504502595050561Rat
1311317Hhipl2HHIP like 2139505468595074609Rat
7514973LOC102555798uncharacterized LOC102555798139522172595320830Rat
1310844Dusp10dual specificity phosphatase 10139561371695651716Rat
11381220LOC108352654uncharacterized LOC108352654139579543795801285Rat
41192681LOC120096338uncharacterized LOC120096338139601074396034445Rat
41386463LOC120096339uncharacterized LOC120096339139613217796143196Rat
1311961HlxH2.0-like homeobox139628033596285750Rat
1592219Mtarc1mitochondrial amidoxime reducing component 1139632437796362677Rat
621257Mtarc2mitochondrial amidoxime reducing component 2139636281096397284Rat
1310587C13h1orf115similar to human chromosome 1 open reading frame 115139642230896432044Rat
619882Mark1microtubule affinity regulating kinase 1139645018996555304Rat
41326322LOC120096209glyceraldehyde-3-phosphate dehydrogenase-like139669133196692427Rat
7720526LOC102549556uncharacterized LOC102549556139671856596737733Rat
1311518Rab3gap2RAB3 GTPase activating non-catalytic protein subunit 2139675743096828930Rat
2325513Mir664-2microRNA 664-2139679309996793157Rat
1311857Iars2isoleucyl-tRNA synthetase 2, mitochondrial139683148496865518Rat
2325555Mir194-1microRNA 194-1139685116696851248Rat
2325531Mir215microRNA 215139685144096851536Rat
621833Bpnt13'(2'), 5'-bisphosphate nucleotidase 1139686563496893506Rat
1310952Eprs1glutamyl-prolyl-tRNA synthetase 1139690154896971966Rat
6491284LOC100911719uncharacterized LOC100911719139698933796998938Rat
1305098Slc30a10solute carrier family 30, member 10139699814397048076Rat
1311195Lyplal1lysophospholipase-like 1139762656897657901Rat
40978410LOC120096370U7 small nuclear RNA139765892197658982Rat
1561704Rpl27a-ps6ribosomal protein L27a, pseudogene 6139773295997733401Rat
40943374LOC120096340uncharacterized LOC120096340139793077997939005Rat
41231635LOC120096341uncharacterized LOC120096341139813268298143529Rat
70491Tgfb2transforming growth factor, beta 2139816007598261771Rat
41286745LOC120096377small nucleolar RNA SNORA70139823041298230546Rat
1306106Rrp15ribosomal RNA processing 15 homolog139827627698299357Rat
9265604LOC103692378uncharacterized LOC103692378139832941998349767Rat
9167857LOC103692383uncharacterized LOC103692383139840376998432532Rat
1309586Ddx3DEAD-box helicase 3139852053898523707Rat
7661785LOC102548113uncharacterized LOC102548113139856597998575026Rat
1565282Spata17spermatogenesis associated 17139860598698784855Rat
1308865Gpatch2G patch domain containing 2139878499398925696Rat
41105733LOC120096343uncharacterized LOC120096343139880035198818792Rat
7497153LOC102553391uncharacterized LOC102553391139892843798954425Rat
1303236Esrrgestrogen-related receptor gamma139916765699788016Rat
41210326LOC120096194uncharacterized LOC120096194139938699799393038Rat
41079378LOC120096195uncharacterized LOC120096195139969065499729915Rat
628777Ush2ausherin1399837445100503935Rat
41210851LOC120096344uncharacterized LOC120096344139991191799916565Rat
40993422LOC120096394small nucleolar RNA SNORA1713100175956100176088Rat
41009483LOC120096466U6 spliceosomal RNA13100307962100308065Rat
1310658Kctd3potassium channel tetramerization domain containing 313100510193100548765Rat
7497476LOC102548492uncharacterized LOC10254849213100555578100577655Rat
7537328LOC102548648uncharacterized LOC10254864813100646474100692455Rat
2319087Tmem14cl1transmembrane protein 14C like 113100656576100657086Rat
621448Kcnk2potassium two pore domain channel subfamily K member 213100766101100963435Rat
41263005LOC120096345wiskott-Aldrich syndrome protein homolog 1-like13100907468100909141Rat
628667Cenpfcentromere protein F13101184127101229714Rat
1307885Ptpn14protein tyrosine phosphatase, non-receptor type 1413101268258101420508Rat
727785Smyd2SET and MYND domain containing 213101425270101466576Rat
1306890Prox1prospero homeobox 113101669184101719804Rat
41085259LOC120096346uncharacterized LOC12009634613101719419101723304Rat
7505050LOC102549163uncharacterized LOC10254916313101814040101817892Rat
41271864LOC120096347uncharacterized LOC12009634713101845662101851581Rat
41266124Ppid-ps9peptidylprolyl isomerase D, pseudogene 913101861106101862389Rat
7531379LOC102555128uncharacterized LOC10255512813101871568101888399Rat
7593426LOC102555887uncharacterized LOC10255588713102120032102135875Rat
41380616LOC120096349uncharacterized LOC12009634913102217799102223528Rat
1306578Rps6kc1ribosomal protein S6 kinase C113102346160102491000Rat
1596976H3f3bl1H3.3 histone B like 113102494861102508874Rat
1305056Angel2angel homolog 213102509111102529501Rat
1564105Vash2vasohibin 213102529718102561204Rat
1596541Flvcr1FLVCR choline and heme transporter 113102586263102608647Rat
1593182SPATA45spermatogenesis associated 4513102624298102631191Rat
1589779Tatdn3TatD DNase domain containing 313102634254102649069Rat
1562052Nsl1NSL1 component of MIS12 kinetochore complex13102649050102674059Rat
41066768LOC120096350uncharacterized LOC12009635013102675414102686929Rat
620501Batf3basic leucine zipper ATF-like transcription factor 313102689657102701241Rat
1561646Garin4golgi associated RAB2 interactor family member 413102742988102745168Rat
2165Atf3activating transcription factor 313102751278102800520Rat
7562117LOC102555043uncharacterized LOC10255504313102802661102849841Rat
7571494LOC102555129uncharacterized LOC10255512913102850708102864408Rat
1303289Nenfneudesin neurotrophic factor13102888004102894804Rat
1359339Pacc1proton activated chloride channel 113102904668102929770Rat
1308022Ppp2r5aprotein phosphatase 2, regulatory subunit B', alpha13102931264102975661Rat
41403424LOC120096352uncharacterized LOC12009635213103001302103014001Rat
1583672Sfn-ps1stratifin, pseudogene 113103022522103023757Rat
1310439Dtldenticleless E3 ubiquitin protein ligase homolog13103115810103155029Rat
1308014Ints7integrator complex subunit 713103155123103207953Rat
41018605Rpl12-ps10ribosomal protein L12, pseudogene 1013103175015103180627Rat
41263096Rps18-ps10ribosomal protein S18, pseudogene 1013103224059103224927Rat
1560186Rpl37l2ribosomal protein L37 like 213103269803103270169Rat
1585897Lpgat1lysophosphatidylglycerol acyltransferase 113103294622103365372Rat
7695506LOC102555670uncharacterized LOC10255567013103363777103379226Rat
41101554LOC120096356uncharacterized LOC12009635613103401420103405769Rat
619792Nek2NIMA-related kinase 213103405818103419063Rat
61918Slc30a1solute carrier family 30 member 113103491037103494910Rat
11369965LOC108352598uncharacterized LOC10835259813103510065103515723Rat
41324774LOC120096357uncharacterized LOC12009635713103521702103530595Rat
1593897Rd3RD3 regulator of GUCY2D13103551823103562925Rat
1593883Traf5TNF receptor-associated factor 513103569944103618747Rat
1593864Rcor3REST corepressor 313103624966103665565Rat
7638579LOC102546453uncharacterized LOC10254645313103665698103679516Rat
41343292LOC12009618240S ribosomal protein S19-like13103698510103699057Rat
68398Kcnh1potassium voltage-gated channel subfamily H member 113103722140104024762Rat
1311746Hhathedgehog acyltransferase13104024507104283580Rat
41089238LOC120096441U5 spliceosomal RNA13104254143104254258Rat
1565408Sertad4SERTA domain containing 413104360307104371064Rat
11356540LOC108352599uncharacterized LOC10835259913104369463104372457Rat
1592654Syt14synaptotagmin 1413104416796104570790Rat
41387233LOC120096359uncharacterized LOC12009635913104616350104622935Rat
1359148Utp25UTP25 small subunit processome component13104630390104651681Rat
1309645Irf6interferon regulatory factor 613104672179104691386Rat
41395141LOC120096360uncharacterized LOC12009636013104672990104686904Rat
1642423C13h1orf74similar to human chromosome 1 open reading frame 7413104692769104695368Rat
1304848Traf3ip3TRAF3 interacting protein 313104694802104719655Rat
2834Hsd11b1hydroxysteroid 11-beta dehydrogenase 113104728539104798884Rat
41366264LOC120096391small nucleolar RNA SNORA4813104734795104734930Rat
1311675G0s2G0/G1switch 213104806351104807263Rat
1562668Lamb3laminin subunit beta 313104833810104875405Rat
621800Camk1gcalcium/calmodulin-dependent protein kinase IG13104877909104901658Rat
2325377Mir205microRNA 20513105035878105035985Rat
41179648LOC120096361uncharacterized LOC12009636113105062564105111426Rat
7635608LOC102549394uncharacterized LOC10254939413105474650105485302Rat
7646423LOC102549557uncharacterized LOC10254955713105578824105603097Rat
41017384LOC120096363uncharacterized LOC12009636313105791439105794755Rat
1305325Plxna2plexin A213106163103106358979Rat
41230703LOC120096389small nucleolar RNA SNORA2813106209168106209272Rat
7746718LOC102550245uncharacterized LOC10255024513106406141106481830Rat
1306863Cd34CD34 molecule13106480313106500844Rat
40996324LOC120096364uncharacterized LOC12009636413106514776106534808Rat
7573645LOC102550527uncharacterized LOC10255052713106551676106571275Rat
2314889Mir29b2microRNA 29b-213106570371106570451Rat
4888606Mir3556bmicroRNA 3556b13106570891106570997Rat
2314880Mir29cmicroRNA 29c13106570899106570986Rat
3061Cd46CD46 molecule13106575586106606325Rat
2399Cr1lcomplement C3b/C4b receptor 1 like13106606952106660442Rat
11458484LOC108352604uncharacterized LOC10835260413106607115106625228Rat
1310065Cr2complement C3d receptor 213106678579106716595Rat
41295153LOC120096407small nucleolar RNA SNORA1713106750726106750855Rat
41211602LOC120096211uncharacterized LOC12009621113106761471106763898Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10204D13Arb11234138475327784753511Ratregion
10205D13Mgh17398138475311384753510Ratregion
10569D13Wox17223138568589585686118Ratregion
34080D13Mgh10111139339586393395974Ratregion
34124D13Mgh6108139721375597213863Ratregion
34540D13Mgh14238138475531884755556Ratregion
33644D13Mit4122138680077686800898Ratregion
36055D13Rat5017713104036780104036957Ratregion
36350D13Mit15208139651257996512789Ratregion
37542D13Rat8214113106384713106384854Ratregion
37554D13Rat57148138075325680753406Ratregion
37576D13Rat192196139572224495722440Ratregion
35192D13Rat7613413104980119104980253Ratregion
35252D13Rat48148139911991999120067Ratregion
35471D13Rat47168139925824999258417Ratregion
36848D13Rat49139139977888099779019Ratregion
37088D13Rat34212138838474788384959Ratregion
37726D13Rat84149139527334595273494Ratregion
34819D13Rat15714613101740960101741106Ratregion
34945D13Rat5115513101339738101339893Ratregion
39662D13Rat16122213105806760105806980Ratregion
39950D13Rat133115138300588983006034Ratregion
38160D13Rat153236139270084392701079Ratregion
40468D13Rat16317813101056742101056920Ratregion
40568D13Rat152109138558107385581182Ratregion
38582D13Rat56235138169065581690878Ratregion
40298D13Rat141271139853712698537397Ratregion
39262D13Rat86230138760358987603819Ratregion
39436D13Rat14220113101631289101631490Ratregion
41970D13Arb13132138473106684731198Ratregion
41972D13Arb15294139243587892436175Ratregion
43004D13Rat185192138383241983832611Ratregion
43005D13Rat187208138724099887241206Ratregion
42385D13Rat193280139905566799056004Ratregion
42385D13Rat193280139905572999056004Ratregion
41742D13Rat16224313101707556101707799Ratregion
41802D13Rat15821013101339717101339927Ratregion
45079D13Wox8111138473078884730899Ratregion
45081D13Got72254138473752984737783Ratregion
45086D13Got71148138329094583291091Ratregion
45089D13Got70117138353044983530566Ratregion
45093D13Got76110138847442188474531Ratregion
45096D13Got82128138952283989522967Ratregion
45097D13Got79126139097270290972828Ratregion
45098D13Got81138139102962691029766Ratregion
45100D13Got84262139332200493322266Ratregion
45101D13Got83169139139864691398815Ratregion
45103D13Got86177139302153893021715Ratregion
45104D13Got80240139024857390248813Ratregion
45108D13Got90180139433549094335670Ratregion
45109D13Got88198139455305094553248Ratregion
45111D13Got87130139437150794371637Ratregion
45115D13Got95107139943820599438312Ratregion
45116D13Got9720013100787568100787768Ratregion
45118D13Got96273139991760799917880Ratregion
45121D13Got11313913101470250101470389Ratregion
45122D13Got10017413101406405101406579Ratregion
45123D13Wox418713101105032101105219Ratregion
45124D13Got94129139939935899399487Ratregion
45125D13Got9925313101941881101942134Ratregion
45126D13Got10415513103215826103215981Ratregion
45127D13Got10321713106231849106232066Ratregion
45128D13Got11428913106179568106179857Ratregion
45129D13Got10223213104889451104889683Ratregion
45130D13Got10716413104715188104715352Ratregion
45132D13Got10619413104576880104577074Ratregion
45675D20Got10181139393009593931328Ratregion
60032D13Got10821713102154605102154822Ratregion
60049D13Got59177138259800782598186Ratregion
60050D13Got62223138173064481730867Ratregion
60051D13Got65203138178908981789292Ratregion
60052D13Got67152138173508181735233Ratregion
60053D13Got73256139139865191398907Ratregion
60054D13Got89230139443894694439176Ratregion
60055D13Got91135139563033695630471Ratregion
62434D13Uia120213104358537104358739Ratregion
62437D13Uia214613104358572104358718Ratregion
62458D13Uia7155138731141087311565Ratregion
62463D13Uia8233138804243788042670Ratregion
66507D13Mco3348139611688496117232Ratregion
66513D13Mco6329138501485385015182Ratregion
66678D13Mco16196139056220490562400Ratregion
66713D13Mco20134138954376489543897Ratregion
66716D13Mco21115138721211787212232Ratregion
66718D13Mco22208138609270586092913Ratregion
67220D13Arb14402139243713692437538Ratregion
1631080D13Got242210139643006596430275Ratregion
1632429D13Got240243138860064488600888Ratregion
1627883D13Wox2217313104772782104772955Ratregion
1627949D8Got346139139672603696726088Ratregion
1628488D13Got244291139708485897085149Ratregion
1629033D13Uia11287139861860898618895Ratregion
1629662D13Ulb2283138701628487016569Ratregion
1635055D13Wox19173138475723584757410Ratregion
1636190D13Cebr1223139837659198376814Ratregion
7206022Olfr16733138543084585431578Ratregion
7387249rs8156450138895120488951204Ratregion
7191226d13mit1310613101356778101356884Ratregion
7206776RH647111107139375512393755154Ratregion
5035739WI-8450314139007785890078172Ratregion
5038756RH12731421213104806444104806656Ratregion
5038772RH127324205139259474492594949Ratregion
5038818RH127350214138677873786778951Ratregion
5036087Atp1a2271138473271484732985Ratregion
5036127Crp152138516286385163015Ratregion
5038872RH12738120413102586601102586805Ratregion
5038912RH127404189139701246397012652Ratregion
5038968RH127436216138483489584835111Ratregion
7206516UniSTS:546820527139007857290079099Ratregion
7206762ha2905772139048185890482630Ratregion
5036284W53272109138370325783703366Ratregion
5039210RH127575181139001066590010846Ratregion
5039038RH127477187138453055284530739Ratregion
5036753AU049094130138424181584241946Ratregion
5037213C86562013106375263106376303Ratregion
5035655RH7888815313102919124102919277Ratregion
5025996RH130509187138219366182193848Ratregion
5026098RH130903191138188584181886032Ratregion
5028649RH125798244139007782890078072Ratregion
7205800D1S2012E0139004447590045330Ratregion
5031464AU048237160139924816599248325Ratregion
5034061RH14121218713104804353104804540Ratregion
5026216RH131359204138697934486979548Ratregion
5028759RH142220167138193702481937191Ratregion
5028781RH14230119613102751745102751941Ratregion
5028885RH142695144138256023782560381Ratregion
5034235RH141875210139362154593621755Ratregion
5034257RH141956187139098992890990115Ratregion
5028959RH142977110138254784582547955Ratregion
5029055RH14334616613101190612101190778Ratregion
5034426BE117945169139126432891264497Ratregion
5034460BE118607209139080809390808302Ratregion
5034476BE118958202138378443383784635Ratregion
5026480RH132374187138866979488669981Ratregion
5026548RH132632202138465860084658802Ratregion
5029299RH144271179139137248491372663Ratregion
5032159RH125959223139248430292484525Ratregion
5026832RH133702184138193870181938885Ratregion
5032201AF069985114138376992983770043Ratregion
5032337AI462003129139190350591903634Ratregion
5035070D7S2869105138413787484137979Ratregion
5035110WI-7584337139007785890078195Ratregion
5029615BE101638192139248590992486101Ratregion
5027203AW495251123138219928782199410Ratregion
5027205AW125175116138369705683697172Ratregion
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5501916MARC_17431-17432:1022875841:6473139268642792686900Ratregion
5501950MARC_20677-20678:1024509130:1665139007842790079092Ratregion
5502094MARC_4129-4130:996679399:1694138384960283850296Ratregion
5501860MARC_16101-16102:1018026133:1986138193965881940647Ratregion
5502064MARC_26419-26420:1036768776:5490139007785290078342Ratregion
5506704G42052229138478442084784649Ratregion
5506767G45242145138283888982839034Ratregion
5502415RH124784195138465714284657336Ratregion
10755481rs107403307138752536987525369Ratregion
Position Markers

Flank 1: (D13Rat57)
Rat AssemblyChrPosition (strand)Source
GRCr81383,286,150 - 83,286,298 (+)Marker Load Pipeline
mRatBN7.21380,753,256 - 80,753,406 (+)MAPPER
Rnor_6.01386,833,393 - 86,833,540NCBI
Rnor_5.01391,468,337 - 91,468,484UniSTS
RGSC_v3.41384,280,242 - 84,280,390RGD
RGSC_v3.41384,280,243 - 84,280,390UniSTS
RGSC_v3.11384,294,431 - 84,294,578RGD
Celera1380,445,264 - 80,445,411UniSTS
RH 3.4 Map13532.6UniSTS
RH 3.4 Map13532.6RGD
RH 2.0 Map13585.0RGD
SHRSP x BN Map1337.3798RGD
Peak: (D13Mgh6)
Rat AssemblyChrPosition (strand)Source
GRCr81399,745,300 - 99,745,408 (+)Marker Load Pipeline
mRatBN7.21397,213,755 - 97,213,863 (+)MAPPER
Rnor_6.013103,613,626 - 103,613,733NCBI
Rnor_5.013108,279,035 - 108,279,142UniSTS
RGSC_v3.413101,704,193 - 101,704,301RGD
RGSC_v3.413101,704,194 - 101,704,301UniSTS
RGSC_v3.113101,893,236 - 101,893,344RGD
Celera1396,726,130 - 96,726,237UniSTS
RH 3.4 Map13656.7RGD
RH 3.4 Map13656.7UniSTS
RH 2.0 Map13716.2RGD
Cytogenetic Map13 RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1298066Bp159Blood pressure QTL 1590.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134608804691088046Rat
10755495Bp387Blood pressure QTL 3873.78arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133466346187525369Rat
1354655Bp241Blood pressure QTL 2413.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1356056920101056920Rat
4889606Gluco63Glucose level QTL 632.860.003blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1380753256106807694Rat
70220Bp55Blood pressure QTL 555.75arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)133737450982374509Rat
8655945Rf61Renal function QTL 613.6blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)136906051986800898Rat
71119Thym2Thymus enlargement QTL 23.8thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)134619797684753113Rat
4889861Pur29Proteinuria QTL 2913.80.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)133741558480753406Rat
1331783Bp221Blood pressure QTL 2213.72886arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)136906051986800898Rat
8655959Pur32Proteinuria QTL 328.4urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)137402391897213863Rat
1302791Stl29Serum triglyceride level QTL 293.30.0011blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)138473078886800898Rat
12879441Bp396Blood pressure QTL 396arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)134569998390699983Rat
2293687Bss26Bone structure and strength QTL 264.60.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)1365103704106807694Rat
1300166Kidm6Kidney mass QTL 63.93kidney mass (VT:0002707)single kidney wet weight to body weight ratio (CMO:0000622)136906051986800898Rat
619615Bp80Blood pressure QTL 800.0354arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133975454484754544Rat
1581570Eae17Experimental allergic encephalomyelitis QTL 174.1nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)138897350101631289Rat
1549897Stresp12Stress response QTL 123.35stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)133843340883433408Rat
7207885Glom27Glomerulus QTL 273.9kidney glomerulus integrity trait (VT:0010546)kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)1320605871101339738Rat
7387280Uae43Urinary albumin excretion QTL 435.690.4174urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1366451204106807694Rat
738027Lnnr6Liver neoplastic nodule remodeling QTL 63.3liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)137486211785581182Rat
738026Lnnr5Liver neoplastic nodule remodeling QTL 53.29liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)135987440885581182Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)133124133193395974Rat
2293702Bss34Bone structure and strength QTL 344.610.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)1365103704106807694Rat
61349Bp31Blood pressure QTL 315.75arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)133737450982374509Rat
1354621Rf47Renal function QTL 473.7kidney renin amount (VT:0010559)kidney renin level (CMO:0002166)1330395351101056920Rat
12879477Bp401Blood pressure QTL 401arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)133726209282262092Rat
1331750Bp220Blood pressure QTL 2202.98arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)133741558482415584Rat
1641901Alcrsp6Alcohol response QTL 6response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)135236217197362171Rat
12879475Bp400Blood pressure QTL 400arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1361825626106807694Rat
11530006Niddm72Non-insulin dependent diabetes mellitus QTL 720.001blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)137402391880753406Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)131101056920Rat
2293341Glom15Glomerulus QTL 159.1kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)1374862117101339893Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general the SS allele from CDS was responsible for higher glucose level and glucose to insulin ratio at 30 min and lower pancreatic mass 2326163
qtl_general this region is confirmed by co-segregation analysis; not detected in males 2326163
qtl_general number of animals used: 159 F2 females 2326163
qtl_general measurement method: 1 month old animals were weaned and fed the diabetogenic diet (DD) after 4 weeks on DD diet glucose level and plasma insulin level were measured; pancreas was weighed after OGTT when the animals were sacrificed 2326163
qtl_general software package used: one-way ANOVA and MultiQTL version 2.5 2326163