Glom15 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Glom15 (Glomerulus QTL 15) Rattus norvegicus

Symbol: Glom15
Name: Glomerulus QTL 15
RGD ID: 2293341
Also known as: crescentic glomerulonephritis 1; Crgn1
Trait: kidney glomerulus integrity trait   (VT:0010546)    
Measurement Type: kidney sclerotic glomeruli count to total glomeruli count ratio   (CMO:0001269)    
LOD Score: 9.1
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21374,862,117 - 101,339,893RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01380,403,559 - 108,770,687RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01385,295,639 - 113,387,165RGDRnor5.0
RGSC_v3.41378,189,125 - 106,076,220RGDRGSC3.4
Cross Type: intercross
Strains Crossed: LEW/NHsd WKY/NCrl 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Candidate Gene Status
Fcgr2a is a candidate Gene for Glom15

Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
LEW/NHsd  (IEA)
WKY/NCrl  (IEA)

References

References - curated
1. Aitman TJ, etal., Nature. 2006 Feb 16;439(7078):851-5.
2. Behmoaras J, etal., J Am Soc Nephrol. 2010 May 20.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
68400Cd244CD244 molecule138401888784036612Rat
2131Apoa2apolipoprotein A2138364446083646358Rat
3656Selpselectin P137647622976511846Rat
3568Rgs5regulator of G-protein signaling 5138184825481885053Rat
3567Rgs4regulator of G-protein signaling 4138193677581943103Rat
3654Seleselectin E137640284176412741Rat
619880Nme7NME/NM23 family member 7137665730376786768Rat
2622Fmo1flavin containing dimethylaniline monoxygenase 1137518218475214439Rat
2305Cd247Cd247 molecule137804330278118437Rat
2837Hsd17b7hydroxysteroid (17-beta) dehydrogenase 7138217007982190018Rat
62390Akt3AKT serine/threonine kinase 3138894370889225831Rat
2168Atp1a2ATPase Na+/K+ transporting subunit alpha 2138472959784754544Rat
2170Atp1b1ATPase Na+/K+ transporting subunit beta 1137678658076807096Rat
61952Atp1a4ATPase Na+/K+ transporting subunit alpha 4138468376684719790Rat
70917Degs1delta(4)-desaturase, sphingolipid 1139394615493953677Rat
2411CrpC-reactive protein138513163585175179Rat
2268Capn2calpain 2139415024494200969Rat
61822Kcnj10potassium inwardly-rectifying channel, subfamily J, member 10138480202684835383Rat
2053Parp1poly (ADP-ribose) polymerase 1139230759392339406Rat
3109Mpzmyelin protein zero138357081183576680Rat
70491Tgfb2transforming growth factor, beta 2139816007598261771Rat
2932Itpkbinositol-trisphosphate 3-kinase B139206916092164281Rat
628777Ush2ausherin1399837445100503935Rat
708450Adcy10adenylate cyclase 10137774775277833952Rat
631351Tlr5toll-like receptor 5139463477894658992Rat
628667Cenpfcentromere protein F13101184127101229714Rat
621689Pou2f1POU class 2 homeobox 1137812061778263306Rat
620046Rxrgretinoid X receptor gamma137974343079785173Rat
2599Fcer1gFc fragment of IgE receptor Ig138364944783654215Rat
620430Myocmyocilin137497673074987128Rat
621400Nr1i3nuclear receptor subfamily 1, group I, member 3138363294083638193Rat
621406Cdc42bpaCDC42 binding protein kinase alpha139168377591903732Rat
620372Hnrnpuheterogeneous nuclear ribonucleoprotein U139006905890086905Rat
619882Mark1microtubule affinity regulating kinase 1139645018996555304Rat
68322Apcsamyloid P component, serum138537333885374134Rat
620610Kmokynurenine 3-monooxygenase138755708087589334Rat
619761Fmo3flavin containing dimethylaniline monoxygenase 3137530936775334915Rat
2597Fcer1aFc fragment of IgE receptor Ia138568609985692394Rat
620742Uck2uridine-cytidine kinase 2137938080779438352Rat
620106Nos1apnitric oxide synthase 1 adaptor protein138254978682820949Rat
621257Mtarc2mitochondrial amidoxime reducing component 2139636281096397284Rat
631418Ncstnnicastrin138453044284546454Rat
620974Usf1upstream transcription factor 1138384523083854875Rat
628884Prrx1paired related homeobox 1137560077775671896Rat
621060Psen2presenilin 2139196750691993240Rat
621448Kcnk2potassium two pore domain channel subfamily K member 213100766101100963435Rat
1304584Fbxo28F-box protein 28139399599394021464Rat
619855Ddr2discoidin domain receptor tyrosine kinase 2138219362382318229Rat
68375Dusp12dual specificity phosphatase 12138312219283131800Rat
621440Kcnj9potassium inwardly-rectifying channel, subfamily J, member 9138478082684787928Rat
1306711Gpa33glycoprotein A33137838114178414765Rat
621548Zbtb18zinc finger and BTB domain containing 18138943963389447958Rat
621842F11rF11 receptor138387379783897388Rat
621242Adamts4ADAM metallopeptidase with thrombospondin type 1 motif, 4138367055683680045Rat
620620Cd48Cd48 molecule138418488484209144Rat
727821Nit1nitrilase 1138376988883773324Rat
1303067Fcgr3aFc fragment of IgG receptor IIIa138324990583259921Rat
620813Lbrlamin B receptor139353936093564065Rat
2614Fhfumarate hydratase138752433187550215Rat
3655Sellselectin L137641696976436444Rat
68409Aldh9a1aldehyde dehydrogenase 9 family, member A1137950573879522539Rat
620085Capn8calpain 8139425221894316146Rat
621833Bpnt13'(2'), 5'-bisphosphate nucleotidase 1139686563496893506Rat
71041Pigmphosphatidylinositol glycan anchor biosynthesis, class M138483832984842026Rat
1304566Igsf9immunoglobulin superfamily, member 9138494864384965616Rat
628600Fmo2flavin containing dimethylaniline monoxygenase 2137522114975244377Rat
1306263Slamf8SLAM family member 8138504772985057571Rat
1305572Sde2SDE2 telomere maintenance homolog139257884392595142Rat
1306829Tmem63atransmembrane protein 63a139266287292696186Rat
3570Rgs7regulator of G-protein signaling 7138697926987408834Rat
1304715Rcsd1RCSD domain containing 1137790189877964336Rat
620452Xcl1X-C motif chemokine ligand 1137724886577252308Rat
1305698Taf1aTATA-box binding protein associated factor, RNA polymerase I subunit A139501216095048131Rat
1305194Spta1spectrin, alpha, erythrocytic 1138620350486279371Rat
1306373Mgst3microsomal glutathione S-transferase 3137952654179547479Rat
1305098Slc30a10solute carrier family 30, member 10139699814397048076Rat
620050Dedddeath effector domain-containing138375587483769982Rat
727781Sdccag8SHH signaling and ciliogenesis regulator SDCCAG8138875452188979363Rat
1306055Pea15proliferation and apoptosis adaptor protein 15138465781584667437Rat
2968Uhmk1U2AF homology motif kinase 1138239664682416292Rat
1305471Atf6activating transcription factor 6138292757983106381Rat
1307161BroxBRO1 domain and CAAX motif containing139492010794940189Rat
1304784Lmx1aLIM homeobox transcription factor 1 alpha137983461479978253Rat
1305191Kifap3kinesin-associated protein 3137612770276264654Rat
1308513Dcaf8DDB1 and CUL4 associated factor 8138460983884667025Rat
1310011Mixl1Mix paired-like homeobox 1139242203192426065Rat
1306089Mndamyeloid cell nuclear differentiation antigen138601788886035556Rat
1307035Cadm3cell adhesion molecule 3138578648285817412Rat
1306804Creg1cellular repressor of E1A-stimulated genes 1137801981478032310Rat
1306774Tada1transcriptional adaptor 1137863290878646863Rat
1306783Mettl18methyltransferase like 18137634588876348798Rat
1306106Rrp15ribosomal RNA processing 15 homolog139827627698299357Rat
1311500Igsf8immunoglobulin superfamily, member 8138477034884781534Rat
1333906Olr1597olfactory receptor 1597138628153586282476Rat
1309442Vangl2VANGL planar cell polarity protein 2138446273184489404Rat
1333649Olr1586-psolfactory receptor pseudogene 1586138606359486064132Rat
1310525CopaCOPI coat complex subunit alpha138454648384586879Rat
1308951Pogkpogo transposable element derived with KRAB domain137864744778663363Rat
1309586Ddx3yDEAD-box helicase 3, Y-linked139852053898523707Rat
1307283Aim2absent in melanoma 2138586520685906996Rat
1309753Vamp4vesicle-associated membrane protein 4137491987274942791Rat
1307952Nuf2NUF2 component of NDC80 kinetochore complex138169367581722765Rat
1332837Olr1577-psolfactory receptor pseudogene 1577138553163685532241Rat
1333957Olr1592olfactory receptor 1592138614840286149325Rat
1559740Cnih4cornichon family AMPA receptor auxiliary protein 4139291031592926428Rat
1310508Adssadenylosuccinate synthase138976924089799577Rat
1333297Olr1585olfactory receptor 1585138605849786063730Rat
1333184Olr1600olfactory receptor 1600138631619586317124Rat
1332648Olr1579olfactory receptor 1579138559008285591014Rat
1332672Olr1593olfactory receptor 1593138616424486165191Rat
2557Ephx1epoxide hydrolase 1139271431592744124Rat
1563939Fcrl6Fc receptor-like 6138506270985072308Rat
1332683Olr1591olfactory receptor 1591138613614486137094Rat
1312014Lrrc52leucine rich repeat containing 52137959724479620640Rat
71069Fcgr2aFc fragment of IgG receptor IIa138328078283297535Rat
1333702Olr1576olfactory receptor 1576138543065585431584Rat
1310952Eprsglutamyl-prolyl-tRNA synthetase139690154896971966Rat
1310844Dusp10dual specificity phosphatase 10139561371695651716Rat
1311961HlxH2.0-like homeobox139628033596285750Rat
1359392Desi2desumoylating isopeptidase 2138996176790011255Rat
1332808Olr1581olfactory receptor 1581138564779685648728Rat
1310442TiprlTOR signaling pathway regulator137752717677552026Rat
1311526Mettl13methyltransferase 13, eEF1A lysine and N-terminal methyltransferase137488615174899937Rat
1311440Sccpdhsaccharopine dehydrogenase (putative)139140012091421875Rat
1560672Ccdc190coiled-coil domain containing 190138214716182154863Rat
1308992Scyl3SCY1 like pseudokinase 3137627842876303038Rat
1306913Pex19peroxisomal biogenesis factor 19138459227784608793Rat
1310623Sft2d2SFT2 domain containing 2137748477877504123Rat
1332878Olr1594-psolfactory receptor pseudogene 1594138617194186172895Rat
1310261Nhlh1nescient helix loop helix 1138451734784522548Rat
1308611Slc19a2solute carrier family 19 member 2137660197576616175Rat
1309465Exo1exonuclease 1138780972587834654Rat
1308593Efcab2EF-hand calcium binding domain 2139015200290237918Rat
1305945Slamf9SLAM family member 9138494189684944749Rat
1311518Rab3gap2RAB3 GTPase activating non-catalytic protein subunit 2139675743096828930Rat
1307885Ptpn14protein tyrosine phosphatase, non-receptor type 1413101268258101420508Rat
1308865Gpatch2G patch domain containing 2139878496998925696Rat
1311317Hhipl2HHIP like 2139505468595074609Rat
1305461Tp53bp2tumor protein p53 binding protein, 2139408876994145436Rat
1310658Kctd3potassium channel tetramerization domain containing 313100510193100548765Rat
1309202Dusp23dual specificity phosphatase 23138509879285099984Rat
1309257Olfml2bolfactomedin-like 2B138286941482906607Rat
1308245Coq8acoenzyme Q8A139190473191933588Rat
1309105Cox20cytochrome c oxidase assembly factor COX20139006590090075386Rat
1307675Disp1dispatched RND transporter family member 1139472092894866702Rat
1310074Pycr2pyrroline-5-carboxylate reductase 2139262646292630256Rat
1307176Dptdermatopontin137712292677151646Rat
1309333Maelmaelstrom spermatogenic transposon silencer137845707378496657Rat
1307091Tfb2mtranscription factor B2, mitochondrial139127888991296709Rat
1307109Ndufs2NADH:ubiquinone oxidoreductase core subunit S2138365440283671474Rat
1310145Tbx19T-box transcription factor 19137745084877484475Rat
1306176FcrlaFc receptor-like A138316045383170170Rat
1307666EnahENAH, actin regulator139361775193738119Rat
1308341Ly9lymphocyte antigen 9138408128384100757Rat
1310543Ppoxprotoporphyrinogen oxidase138369766183701998Rat
1308213Pbx1PBX homeobox 1138027876680588563Rat
1310587RGD1310587similar to hypothetical protein FLJ14146139642230896432044Rat
1310840Tagln2transgelin 2138496698084973973Rat
1359679Lefty2Left-right determination factor 2139261018592620918Rat
1561908RGD1561908similar to COP9 signalosome complex subunit 8 (JAB1-containing signalosome subunit 8)137641372176414261Rat
1566064Prrc2cproline-rich coiled-coil 2C137500399575073701Rat
1561025Klhdc9kelch domain containing 9138379026983794080Rat
1563245Gpr161G protein-coupled receptor 161137757825777623661Rat
1333784Olr1596olfactory receptor 1596138618644286190391Rat
1565589Wdr26WD repeat domain 26139293028292972061Rat
1561559Cfap45cilia and flagella associated protein 45138498947485012880Rat
1303236Esrrgestrogen-related receptor gamma139916765699788016Rat
1334338Olr1595olfactory receptor 1595138618057986181526Rat
1561961Dcaf6DDB1 and CUL4 associated factor 6137762625777727645Rat
1562452Blzf1basic leucine zipper nuclear factor 1137664175776656977Rat
1562462RGD1562462similar to Ifi204 protein138594002885951004Rat
1561704RGD1561704similar to 60S ribosomal protein L27a (L29)139773295997733401Rat
1560008Grem2gremlin 2, DAN family BMP antagonist138677854386871509Rat
1561419Arhgap30Rho GTPase activating protein 30138382229083843634Rat
1562397Rpl30l1ribosomal protein L30-like 1138928168789284907Rat
1563293Becn2beclin 2138784352887892343Rat
1559491Fmo6flavin containing monooxygenase 6137525661775288167Rat
1560634Slamf1signaling lymphocytic activation molecule family member 1138427031684305497Rat
1564043Susd4sushi domain containing 4139445518094577773Rat
1560022Kif26bkinesin family member 26B139028282190689058Rat
628601Fmo4flavin containing dimethylaniline monoxygenase 4137515468375172932Rat
1563422Mpc2mitochondrial pyruvate carrier 2137772817677747664Rat
1562658Cfap126cilia and flagella associated protein 126138352665783542552Rat
1564463RGD1564463similar to Mdes protein139283154992839257Rat
1561048Itln1intelectin 1138393223483958243Rat
1311857Iars2isoleucyl-tRNA synthetase 2, mitochondrial139683177396865533Rat
1560145Ccdc185coiled-coil domain containing 185139443477294436784Rat
1562006Tomm40ltranslocase of outer mitochondrial membrane 40 like138363669283641854Rat
1564106Ntmt2N-terminal Xaa-Pro-Lys N-methyltransferase 2137605068376093972Rat
1332986Olr1601olfactory receptor 1601138635189386352846Rat
1309708Ccdc181coiled-coil domain containing 181137662456776638224Rat
1559696Kif28pkinesin family member 28, pseudogene139142773691482237Rat
1311270Nvlnuclear VCP-like139285102392906749Rat
1334126Olr1578-psolfactory receptor pseudogene 1578138554676985547308Rat
1563812RGD1563812similar to basic transcription factor 3139004478690045645Rat
1332994Olr1590olfactory receptor 1590138611619286117139Rat
1333597Olr1588olfactory receptor 1588138607685786087100Rat
1359221B4galt3beta-1,4-galactosyltransferase 3138369137883697448Rat
1334435Olr1589olfactory receptor 1589138610691286107850Rat
1334438Olr1575-psolfactory receptor pseudogene 1575138535825685359000Rat
1334407Olr1587olfactory receptor 1587138607555786076495Rat
1560598Styxl2serine/threonine/tyrosine interacting like 2137834936178378480Rat
1333029Olr1580-psolfactory receptor pseudogene 1580138560387185604691Rat
1333448Olr1583olfactory receptor 1583138568058185681522Rat
1311195Lyplal1lysophospholipase-like 1139762645197657901Rat
1559826Nectin4nectin cell adhesion molecule 4138380258983821711Rat
1334087Olr1584olfactory receptor 1584138604615886052356Rat
1303313Ufc1ubiquitin-fold modifier conjugating enzyme 1138370933083719762Rat
1334224Olr1602olfactory receptor 1602138639338186394358Rat
1333672Olr1582olfactory receptor 1582138566725485668195Rat
1561848Slamf6SLAM family member 6138438456184405300Rat
1333675Olr1598olfactory receptor 1598138629756086298492Rat
621868Cep170centrosomal protein 170138866967288754011Rat
631331Fcgr2bFc fragment of IgG receptor IIb138319125383207776Rat
1561867Lefty1left right determination factor 1139264922692659722Rat
1359178Tmco1transmembrane and coiled-coil domains 1137946022979483557Rat
1333301Olr1599-psolfactory receptor pseudogene 1599138630599086306968Rat
1566190Ccdc121coiled-coil domain containing 121139325375293255406Rat
1564553Cd84CD84 molecule138432758084367153Rat
1565282Spata17spermatogenesis associated 17139860598698784855Rat
1565283Spata46spermatogenesis associated 46138254118382544808Rat
1562464Vsig8V-set and immunoglobulin domain containing 8138502317785031364Rat
1585268LOC688740similar to 40S ribosomal protein S15 (RIG protein)138442131284421729Rat
1561353Uba2-ps1ubiquitin-like modifier activating enzyme 2, pseudogene 1138775579687758435Rat
1587602LOC688577similar to Macrophage migration inhibitory factor (MIF) (Phenylpyruvate tautomerase) (Glycosylation-inhibiting factor) (GIF) (Delayed early response protein 6) (DER6)138396310983963614Rat
1563018FcrlbFc receptor-like B138314868583157157Rat
1563935Sh2d1bSH2 domain containing 1B138248507682519401Rat
1584663Cct6a-ps8chaperonin containing Tcp1, subunit 6A (zeta 1), pseudogene 8137569179975693451Rat
1561291Ahctf1AT hook containing transcription factor 1139148193291536391Rat
1564990Gorabgolgin, RAB6-interacting137574567875762307Rat
1560190Slamf7SLAM family member 7138413565684154528Rat
1562609Pld5phospholipase D family, member 5138789569488232868Rat
1563470LOC498265similar to hypothetical protein FLJ10706137630191476345842Rat
1559819Fmo13flavin-containing monooxygenase 13137872639878738178Rat
1562635Smyd3SET and MYND domain containing 3139070926391266209Rat
1559938RGD1559938similar to spermine synthase138243550082436942Rat
1359140Mpzl1myelin protein zero-like 1137785246777889305Rat
1561967Uap1UDP-N-acetylglucosamine pyrophosphorylase 1138234294682377558Rat
1564745Mroh9maestro heat-like repeat family member 9137538780075443118Rat
1563410RGD1563410similar to put. type 5 nonmuscle actin138644329486444338Rat
1582826Dnah14dynein axonemal heavy chain 14139332265393540706Rat
1582842LOC690271similar to mitochondrial ribosomal protein S11139340788793409927Rat
1359454Sdhcsuccinate dehydrogenase complex subunit C138354465283565560Rat
1564833Cnstconsortin, connexin sorting protein139129674091373531Rat
1582859Cnih3cornichon family AMPA receptor auxiliary protein 3139301670793208168Rat
1564387Fam78bfamily with sequence similarity 78, member B137916240579250958Rat
1565309Catsperecatsper channel auxiliary subunit epsilon138979966989954723Rat
1589757Dnmt3b-ps2DNA methyltransferase 3B, pseudogene 2138311969683121858Rat
1589758F5coagulation factor V137651346376583106Rat
1591400LOC685613similar to 60S ribosomal protein L7138114052381143120Rat
1591406Pfdn2prefoldin subunit 2138377230183791367Rat
1591103Wdr64WD repeat domain 64138762458887746749Rat
1591104Lin9lin-9 DREAM MuvB core complex component139237461292419664Rat
1592746Aidaaxin interactor, dorsalization associated139494031194967920Rat
1588822Usp21ubiquitin specific peptidase 21138370258283709215Rat
1586677Casq1calsequestrin 1138467064884680339Rat
1589042Sh2d1b2SH2 domain containing 1B2138241636282461511Rat
1586661LOC686035similar to heat shock 70kDa protein 6 (HSP70B)138327134083275267Rat
1590926Mptx1mucosal pentraxin 1138572807685731469Rat
727851Acbd3acyl-CoA binding domain containing 3139245581392484556Rat
1597343Srp9signal recognition particle 9139383258093840720Rat
1595361LOC681470similar to olfactory receptor 1403138572333085724262Rat
1588722LOC689766hypothetical protein LOC689766138974046489771505Rat
1593185LOC498300similar to degenerative spermatocyte homolog139277265492818811Rat
1592612LOC685536similar to platelet-activating factor acetylhydrolase, isoform 1b, alpha1 subunit138009771880098682Rat
1596198Ackr1atypical chemokine receptor 1138578239685786002Rat
1596201ChmlCHM like Rab escort protein138761361087615475Rat
1595083Fmo9flavin containing monooxygenase 9137882008078841075Rat
1592219Mtarc1mitochondrial amidoxime reducing component 1139632437796362677Rat
1592263Stumstum, mechanosensory transduction mediator homolog139217217592227205Rat
1593809Pcp4l1Purkinje cell protein 4-like 1138358899283612631Rat
1591600Mia3MIA SH3 domain ER export factor 3139497042195012071Rat
1594385Opn3opsin 3138758933087619847Rat
1594388LOC498276Fc gamma receptor II beta138330287483315744Rat
1594389LOC498264similar to heat shock protein 1, alpha137525157375254102Rat
1592115LOC289172similar to peptidylprolyl isomerase D137635887476365328Rat
1598005LOC681267similar to adenylate kinase 2 isoform b137639204276392929Rat
1598298LOC364068similar to ubiquitin C139462553494626396Rat
1598302LOC364041similar to 60S ribosomal protein L7a138070067780701453Rat
1595097LOC685351similar to flavin containing monooxygenase 5137878975978804900Rat
1596420Ildr2immunoglobulin-like domain containing receptor 2137851877078580627Rat
2313878Znrd1-ps1zinc ribbon domain containing 1, pseudogene 1138351089583511537Rat
2319910H3f3aH3.3 histone A139253329492544903Rat
2318303LOC100362384ferritin light chain 1-like138311728083118226Rat
2319087LOC100361993transmembrane protein 14C13100656576100657086Rat
2322099Fmn2formin 2138645425686771437Rat
2320873LOC100361087hypothetical LOC100361087138253353882538676Rat
2321067LOC100360993translocase of inner mitochondrial membrane 23 (yeast) homolog138172285281799780Rat
2321223LOC100364335cold shock domain-containing protein E1-like137847756078481251Rat
2323611LOC100359583hypothetical protein LOC100359583138392107383922040Rat
2323815Tstd1thiosulfate sulfurtransferase like domain containing 1138385342183854875Rat
2325513Mir664-2microRNA 664-2139679309996793157Rat
2325531Mir215microRNA 215139685144096851536Rat
2325555Mir194-1microRNA 194-1139685116696851248Rat
2325611Mir350microRNA 350138871239888712496Rat
2324612LOC100366054Da1-10-like138216868182192948Rat
4145546LOC100526655ribosomal protein L29 pseudogene138353173983532345Rat
6487276LOC100912365uncharacterized LOC100912365139561286595613731Rat
6486032LOC100912617uncharacterized LOC100912617137727033677277051Rat
6491284LOC100911719uncharacterized LOC100911719139698933796998938Rat
6491355LOC10091172840S ribosomal protein S27-like138308281783083112Rat
6496245LOC100910850mortality factor 4-like protein 1-like138743320387434412Rat
6497316LOC100910652osteoclast-stimulating factor 1-like137954949279550765Rat
7514973LOC102555798uncharacterized LOC102555798139522172595320830Rat
7505129LOC102553824uncharacterized LOC102553824139250550292509561Rat
7497153LOC102553391uncharacterized LOC102553391139892843798954425Rat
7497476LOC102548492uncharacterized LOC10254849213100555578100577655Rat
7512173LOC102546371uncharacterized LOC102546371137713923677195397Rat
7535704LOC102555374uncharacterized LOC102555374138497898684986621Rat
7537328LOC102548648uncharacterized LOC10254864813100646474100692455Rat
7614435LOC102553287coiled-coil domain-containing protein 121-like139050529290512865Rat
7636450LOC102556096pyrin domain-containing protein 3-like138591191585929491Rat
7653714LOC102549965uncharacterized LOC102549965138955359889558715Rat
7575339LOC102552174uncharacterized LOC102552174139559997895609748Rat
7638368LOC102546489uncharacterized LOC102546489138689268886972975Rat
7643986LOC10254686640S ribosomal protein S3a-like138759353987594049Rat
7661785LOC102548113uncharacterized LOC102548113139856597998575026Rat
7598395LOC102555487uncharacterized LOC102555487137514960175157370Rat
7603484LOC102555981uncharacterized LOC102555981137635116876367038Rat
7568040LOC102549303uncharacterized LOC102549303138237765282378893Rat
7691195LOC102549878uncharacterized LOC102549878138948838689495453Rat
7673495LOC102549740uncharacterized LOC102549740138942446989439278Rat
7724593LOC102553289uncharacterized LOC102553289139201321792016178Rat
7726144LOC102555308uncharacterized LOC102555308139416025694182046Rat
7718070LOC102553199elongation factor 1-gamma-like139033499290341052Rat
7668865LOC102555375uncharacterized LOC102555375139468314494711681Rat
7718804LOC102553924uncharacterized LOC102553924137970751279712787Rat
7700680LOC102547168guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5-like138372562883727878Rat
7720526LOC102549556uncharacterized LOC102549556139671856596737733Rat
7671987LOC102549964uncharacterized LOC102549964138411882084129028Rat
7749071LOC102550090uncharacterized LOC102550090138282110282823901Rat
7728602LOC10255402260S ribosomal protein L35-like139279594192799355Rat
7728997Fam177bfamily with sequence similarity 177 member B139490412894909688Rat
9191316LOC103693688epoxide hydrolase 1-like139278113592789970Rat
9112028LOC10369202040S ribosomal protein S8 pseudogene137559070675593669Rat
9167857LOC103692383uncharacterized LOC103692383139840376998432532Rat
9205262LOC103692291uncharacterized LOC103692291138487114684872631Rat
9127992LOC103693683low affinity immunoglobulin gamma Fc region receptor III138332284083331714Rat
9288957LOC10369370060S ribosomal protein L36a-like139356684293574024Rat
9333866LOC103692322uncharacterized LOC103692322138772815887735626Rat
9298395LOC103692343uncharacterized LOC103692343138956760389575313Rat
9362824LOC103692323uncharacterized LOC103692323138765371987658671Rat
9265604LOC103692378uncharacterized LOC103692378139832941998349767Rat
9460837LOC103692325uncharacterized LOC103692325138778452787809809Rat
9466182LOC103692065uncharacterized LOC103692065138123451881264218Rat
9329753LOC103692286uncharacterized LOC103692286138415460084184860Rat
9330179LOC103692282uncharacterized LOC103692282138405133984082864Rat
9431477LOC103692288uncharacterized LOC103692288138428700284325493Rat
9431994LOC103692371uncharacterized LOC103692371139639732996404128Rat
9444093LOC10369369360S ribosomal protein L21 pseudogene139772324697723729Rat
11355415LOC108352575uncharacterized LOC108352575138490018384924193Rat
11454394Trnad-guc9transfer RNA aspartic acid (anticodon GUC) 9138351507183515142Rat
11454395Trnag-ucc5transfer RNA glycine (anticodon UCC) 5138347762583477696Rat
11454395Trnag-ucc5transfer RNA glycine (anticodon UCC) 5138333787483337945Rat
11462416LOC108352579uncharacterized LOC108352579139081579490824767Rat
11462796Trnan-guu12transfer RNA asparagine (anticodon GUU) 12138326399683264069Rat
11465002LOC10834831460S ribosomal protein L17 pseudogene139009473390095233Rat
11466947Trnap-agg14transfer RNA proline (anticodon AGG) 14137789506377895134Rat
11469353Trnal-cag4transfer RNA leucine (anticodon CAG) 4138329701183297093Rat
11357429Trnag-ucc6transfer RNA glycine (anticodon UCC) 6138349574383495814Rat
11357429Trnag-ucc6transfer RNA glycine (anticodon UCC) 6138348668583486756Rat
11457523Trnag-gcc4transfer RNA glycine (anticodon GCC) 4138348881883488888Rat
11457523Trnag-gcc4transfer RNA glycine (anticodon GCC) 4138347978283479852Rat
11366826LOC108352580uncharacterized LOC108352580139080557490808333Rat
11372680LOC108352565uncharacterized LOC108352565137719186577214148Rat
11438814Trnal-cag2transfer RNA leucine (anticodon CAG) 2138333905983339141Rat
11448281Trnag-gcc3transfer RNA glycine (anticodon GCC) 3138327528383275353Rat
11363202Trnag-gcc5transfer RNA glycine (anticodon GCC) 5138349969783499767Rat
11428601LOC10835262160S ribosomal protein L6 pseudogene138523853785250025Rat
11428758Trnag-ucc8transfer RNA glycine (anticodon UCC) 8138334688083346951Rat
11440287LOC108352566uncharacterized LOC108352566137906383679069731Rat
11395224Trnag-gcc6transfer RNA glycine (anticodon GCC) 6138334902583349095Rat
11412620Trnap-cgg3transfer RNA proline (anticodon CGG) 3137789569577895766Rat
11413181LOC10835262360S ribosomal protein L7a pseudogene139491521494918192Rat
11413331Trnad-guc8transfer RNA aspartic acid (anticodon GUC) 8138349636483496435Rat
11413703Trnad-guc7transfer RNA aspartic acid (anticodon GUC) 7138347816383478234Rat
11413703Trnad-guc7transfer RNA aspartic acid (anticodon GUC) 7138333841283338483Rat
11415168LOC108352653uncharacterized LOC108352653139490102094903107Rat
11416093LOC108352569uncharacterized LOC108352569137962049779662621Rat
11416577LOC10835264840S ribosomal protein S28 pseudogene137797181177973063Rat
11416840Trnal-cag5transfer RNA leucine (anticodon CAG) 5138331682683316908Rat
11418586LOC108353436uncharacterized LOC108353436138492426084925715Rat
11424972LOC108352567uncharacterized LOC108352567137943980079451430Rat
11426647Trnag-ucc4transfer RNA glycine (anticodon UCC) 4138326839183268462Rat
11355992Trnar-ucu5transfer RNA arginine (anticodon UCU) 5138583980485839877Rat
11386729Trnad-guc6transfer RNA aspartic acid (anticodon GUC) 6138326745483267525Rat
11398805Trnae-cuc8transfer RNA glutamic acid (anticodon CUC) 8138351590383515974Rat
11376557LOC10835265040S ribosomal protein S29138528462285284968Rat
11387238Trnal-cag3transfer RNA leucine (anticodon CAG) 3138351451883514600Rat
11387359LOC108352652uncharacterized LOC108352652139489631094898231Rat
11388196Trnav-cac3transfer RNA valine (anticodon CAC) 3138352375883523830Rat
11400800Trnae-cuc7transfer RNA glutamic acid (anticodon CUC) 7138348618283486253Rat
11402621LOC10835257260S ribosomal protein L31 pseudogene138400006884000983Rat
11381220LOC108352654uncharacterized LOC108352654139579543795801285Rat
11381889LOC108352578uncharacterized LOC108352578138740892987417244Rat
11393231LOC108352577uncharacterized LOC108352577138542401185436529Rat
11519000Trnal-cag1transfer RNA leucine (anticodon CAG) 1138326898783269069Rat
11519140LOC108352585uncharacterized LOC108352585139467125694676837Rat
11519740LOC108352586uncharacterized LOC108352586139498812294992718Rat
11506265Trnad-guc10transfer RNA aspartic acid (anticodon GUC) 10138329635683296427Rat
11497111LOC108352582uncharacterized LOC108352582139209974692103608Rat
11510654LOC10835262260S ribosomal protein L23-like139101746891042084Rat
11498207Trnag-ucc7transfer RNA glycine (anticodon UCC) 7138351557183515642Rat
11499223LOC108352584uncharacterized LOC108352584139394752893960272Rat
11518338Trnad-guc11transfer RNA aspartic acid (anticodon GUC) 11138331617283316243Rat
11518817Trnae-cuc6transfer RNA glutamic acid (anticodon CUC) 6138347712283477193Rat
11518817Trnae-cuc6transfer RNA glutamic acid (anticodon CUC) 6138333736983337440Rat
11488972LOC108352581uncharacterized LOC108352581139135280591394807Rat
11493650LOC108352583uncharacterized LOC108352583139394255993946790Rat
11494075LOC108352568H/ACA ribonucleoprotein complex subunit 3 pseudogene137950954679510189Rat
41321739LOC120096325uncharacterized LOC120096325139133718091347827Rat
41282052LOC120096382U1 spliceosomal RNA137552744875527571Rat
41169092LOC120096303uncharacterized LOC120096303137743839377441736Rat
41250865LOC120096329uncharacterized LOC120096329139385517693856587Rat
41278002LOC120096342uncharacterized LOC120096342139834977898352292Rat
41381727NEWGENE_41007678transfer RNA aspartic acid (anticodon GUC)138336532983365400Rat
41382661NEWGENE_41104094transfer RNA leucine (anticodon CAG)138335703383357115Rat
41205771LOC120096327uncharacterized LOC120096327139230484092307396Rat
41279699NEWGENE_40938478transfer RNA glutamic acid (anticodon CUC)138336428083364351Rat
41325170LOC120096314uncharacterized LOC120096314138313422883139869Rat
41325826NEWGENE_41104094transfer RNA leucine (anticodon CAG)138334806583348147Rat
41280367LOC120096326uncharacterized LOC120096326139205149792054910Rat
41286745LOC120096377small nucleolar RNA SNORA70139823041298230546Rat
41326322LOC120096209glyceraldehyde-3-phosphate dehydrogenase-like139669133196692427Rat
41386463LOC120096339uncharacterized LOC120096339139613217796143196Rat
41208252LOC120096312uncharacterized LOC120096312138024878180254282Rat
41361058LOC120096368U6 spliceosomal RNA138307324083073344Rat
41362358NEWGENE_40938478transfer RNA glutamic acid (anticodon CUC)138335533783355408Rat
41094150LOC120096426small nucleolar RNA U13137929668479296791Rat
41210326LOC120096194uncharacterized LOC120096194139938699799393038Rat
41210851LOC120096344uncharacterized LOC120096344139991191799916565Rat
41261179NEWGENE_41104094transfer RNA leucine (anticodon CAG)138347881183478893Rat
41261293LOC120096392U2 spliceosomal RNA138773227287732452Rat
41363479LOC120096305uncharacterized LOC120096305137799537778003580Rat
41389617LOC120093159natural killer cell receptor 2B4-like138397913484002215Rat
41263005LOC120096345wiskott-Aldrich syndrome protein homolog 1-like13100907468100909141Rat
41177857LOC120096330uncharacterized LOC120096330139421343894214039Rat
41190036LOC120096328uncharacterized LOC120096328139273240192734636Rat
41213261NEWGENE_41004142transfer RNA glycine (anticodon UCC)138336479183364862Rat
41098812LOC120096432U2 spliceosomal RNA137724815277248300Rat
41123084NEWGENE_40938478transfer RNA glutamic acid (anticodon CUC)138337317683373247Rat
41099898LOC120096302uncharacterized LOC120096302137729022177332714Rat
41192681LOC120096338uncharacterized LOC120096338139601074396034445Rat
41216393LOC120096446U6 spliceosomal RNA137701156277011667Rat
41267220LOC120096336uncharacterized LOC120096336139504502595050561Rat
41290003LOC120096311uncharacterized LOC120096311137956446879595563Rat
41398596LOC120096208uncharacterized LOC120096208139554325295544461Rat
41104094Trnal-cagtransfer RNA leucine (anticodon CAG)138336597683366058Rat
41184906LOC120096462U6 spliceosomal RNA139013812990138225Rat
41219038NEWGENE_41104094transfer RNA leucine (anticodon CAG)138348787183487953Rat
41270959LOC120096317uncharacterized LOC120096317138424052184258693Rat
41292405LOC12009630960S ribosomal protein L29-like137925556679257575Rat
41162129LOC120096308uncharacterized LOC120096308137866281478693735Rat
41229627LOC120096335uncharacterized LOC120096335139496264094966002Rat
41271103LOC120096333peptidyl-prolyl cis-trans isomerase NIMA-interacting 4-like139501361295015487Rat
41271470LOC120096320uncharacterized LOC120096320138746796387478899Rat
41105733LOC120096343uncharacterized LOC120096343139880035198818792Rat
41106946LOC120096332uncharacterized LOC120096332139458072394589847Rat
41107089NEWGENE_41104094transfer RNA leucine (anticodon CAG)138592234185922423Rat
41163880NEWGENE_41007678transfer RNA aspartic acid (anticodon GUC)138334741883347489Rat
41231494NEWGENE_41007678transfer RNA aspartic acid (anticodon GUC)138346905583469126Rat
41231635LOC120096341uncharacterized LOC120096341139813268298143529Rat
41294667LOC120096193uncharacterized LOC120096193138870046588706095Rat
41131750LOC12009632440S ribosomal protein S16-like139001338490018315Rat
41200652LOC120096337uncharacterized LOC120096337139599149896008216Rat
41231914LOC120096440U5 spliceosomal RNA138393188183931996Rat
41274182NEWGENE_41004142transfer RNA glycine (anticodon UCC)138346851583468586Rat
41295681LOC120096415small nucleolar RNA SNORA17138799437287994492Rat
41352249NEWGENE_40984440transfer RNA glycine (anticodon GCC)138347066283470732Rat
41352339LOC120096298uncharacterized LOC120096298137486221074863801Rat
41165488LOC120096299uncharacterized LOC120096299137491488974916011Rat
41201902LOC12009619260S ribosomal protein L34-like138924817789249925Rat
40973315LOC120096334uncharacterized LOC120096334139495358994958141Rat
40978283LOC120096461U1 spliceosomal RNA138317561783175780Rat
40978410LOC120096370U7 small nuclear RNA139765892197658982Rat
40929598LOC120096402small nucleolar RNA SNORA17137540782675407928Rat
40981362LOC120096321uncharacterized LOC120096321138935880089377727Rat
40932098LOC120096331uncharacterized LOC120096331139422564994236264Rat
40959119LOC120096322uncharacterized LOC120096322138992917889946634Rat
41004142Trnag-ucctransfer RNA glycine (anticodon UCC)138335584883355919Rat
40960097LOC120096401small nucleolar RNA SNORA17138541292985413048Rat
40984440Trnag-gcctransfer RNA glycine (anticodon GCC)138335798983358059Rat
41007014NEWGENE_40984440transfer RNA glycine (anticodon GCC)138336693683367006Rat
41007678Trnad-guctransfer RNA aspartic acid (anticodon GUC)138348722383487294Rat
40938478Trnae-cuctransfer RNA glutamic acid (anticodon CUC)138346801183468081Rat
40964154Trnap-uggtransfer RNA proline (anticodon UGG)139239874592398825Rat
41009483LOC120096466U6 spliceosomal RNA13100307962100308065Rat
40965556LOC120096304uncharacterized LOC120096304137798686477990913Rat
40967216LOC120096379small nucleolar RNA SNORD113/SNORD114 family139459102394591101Rat
40968627LOC120096319uncharacterized LOC120096319138710074887123260Rat
40993422LOC120096394small nucleolar RNA SNORA1713100175956100176088Rat
40994150LOC120096457U6 spliceosomal RNA139289763192897736Rat
40943374LOC120096340uncharacterized LOC120096340139793077997939005Rat
41312610LOC120096300uncharacterized LOC120096300137566651575684794Rat
41246266NEWGENE_40938478transfer RNA glutamic acid (anticodon CUC)138334636983346440Rat
41027467LOC120096307uncharacterized LOC120096307137855513978558494Rat
41079378LOC120096195uncharacterized LOC120096195139969065499729915Rat
41143120LOC120096315uncharacterized LOC120096315138335943183362332Rat
41338342NEWGENE_40984440transfer RNA glycine (anticodon GCC)138334004783340117Rat
41056279LOC120096205uncharacterized LOC120096205137690473376910108Rat
41317983LOC120096451U6 spliceosomal RNA139236488692364992Rat
41222447LOC120096316uncharacterized LOC120096316138336901383371641Rat
41223721LOC120096430U2 spliceosomal RNA138101727081017344Rat
41300655LOC120096310uncharacterized LOC120096310137942385979425280Rat
41035144LOC120096196uncharacterized LOC120096196139937637199385352Rat
41061811LOC120096318uncharacterized LOC120096318138500516185018197Rat
41302229LOC120096180glyceraldehyde-3-phosphate dehydrogenase-like137537109575386291Rat
41302334LOC120096306uncharacterized LOC120096306137822192878228540Rat
41228731NEWGENE_41007678transfer RNA aspartic acid (anticodon GUC)138337419883374269Rat
41237231LOC120096207uncharacterized LOC120096207138348153783483563Rat
41237828NEWGENE_41007678transfer RNA aspartic acid (anticodon GUC)138335638683356457Rat
41306063NEWGENE_41104094transfer RNA leucine (anticodon CAG)138346970483469786Rat
41306939LOC120096301uncharacterized LOC120096301137629502176297631Rat
41238847LOC120096323uncharacterized LOC120096323138973837389752791Rat
41240085LOC120096206uncharacterized LOC120096206137692958176941817Rat
41309715LOC120096313uncharacterized LOC120096313138263815382642859Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10204D13Arb11215138475327784753511Ratregion
10205D13Mgh17399138475311384753510Ratregion
10569D13Wox17223138568589585686118Ratregion
34080D13Mgh10111139339586393395974Ratregion
34124D13Mgh6112139721375597213863Ratregion
34540D13Mgh14238138475531884755556Ratregion
33644D13Mit4114138680077686800898Ratregion
36350D13Mit15197139651257996512789Ratregion
37240D13Rat63103137704678777046890Ratregion
37554D13Rat57150138075325680753406Ratregion
37576D13Rat192195139572224495722440Ratregion
35252D13Rat48148139911991999120067Ratregion
35471D13Rat47168139925824999258417Ratregion
36848D13Rat49145139977888099779019Ratregion
37088D13Rat34214138838474788384959Ratregion
37726D13Rat84149139527334595273494Ratregion
36506D13Rat32108137486211774862225Ratregion
34769D13Rat33171137847270778472868Ratregion
34945D13Rat5115513101339738101339893Ratregion
39950D13Rat133115138300588983006034Ratregion
38160D13Rat153236139270084392701079Ratregion
40468D13Rat16317413101056742101056920Ratregion
40568D13Rat152137138558107385581182Ratregion
40656D13Rat131147137731293377313088Ratregion
38582D13Rat56228138169065581690878Ratregion
40298D13Rat141287139853712698537397Ratregion
39262D13Rat86209138760358987603819Ratregion
41970D13Arb13127138473106684731198Ratregion
41972D13Arb15296139243587892436175Ratregion
43001D13Rat183212137752353677523740Ratregion
43002D13Rat184227137927434979274584Ratregion
43004D13Rat185205138383241983832611Ratregion
43005D13Rat187200138724099887241206Ratregion
42385D13Rat193280139905572999056004Ratregion
42385D13Rat193280139905566799056004Ratregion
41112D13Rat132228137829113278291378Ratregion
41802D13Rat15820213101339717101339927Ratregion
41900D13Rat190141138015760680157741Ratregion
45062D13Got55173137647835976478532Ratregion
45067D13Got111192137558793975588131Ratregion
45070D13Got61235137769764277697877Ratregion
45071D13Got57252137641583476416086Ratregion
45072D13Got56280137712785877128138Ratregion
45073D13Got66160138004374280043904Ratregion
45075D13Got60125137749626777496394Ratregion
45076D13Got58198137627400076274198Ratregion
45077D13Got63211137796034577960556Ratregion
45079D13Wox8111138473078884730899Ratregion
45081D13Got72254138473752984737783Ratregion
45086D13Got71148138329094583291091Ratregion
45089D13Got70117138353044983530566Ratregion
45093D13Got76110138847442188474531Ratregion
45096D13Got82128138952283989522967Ratregion
45097D13Got79126139097270290972828Ratregion
45098D13Got81138139102962691029766Ratregion
45100D13Got84265139332200493322266Ratregion
45101D13Got83169139139864691398815Ratregion
45103D13Got86176139302153893021715Ratregion
45104D13Got80238139024857390248813Ratregion
45108D13Got90180139433549094335670Ratregion
45109D13Got88198139455305094553248Ratregion
45111D13Got87130139437150794371637Ratregion
45115D13Got95107139943820599438312Ratregion
45116D13Got9720013100787568100787768Ratregion
45118D13Got96273139991760799917880Ratregion
45123D13Wox418013101105032101105219Ratregion
45124D13Got94129139939935899399487Ratregion
45675D20Got10181139393009593931328Ratregion
625775D13Got68166138021699380217157Ratregion
60049D13Got59177138259800782598186Ratregion
60050D13Got62224138173064481730867Ratregion
60051D13Got65198138178908981789292Ratregion
60052D13Got67152138173508181735233Ratregion
60053D13Got73256139139865191398907Ratregion
60054D13Got89226139443894694439176Ratregion
60055D13Got91135139563033695630471Ratregion
62458D13Uia7155138731141087311565Ratregion
62463D13Uia8234138804243788042670Ratregion
66507D13Mco3349139611688496117232Ratregion
66513D13Mco6350138501485385015182Ratregion
66515D13Mco7203137668814976688352Ratregion
66678D13Mco16190139056220490562400Ratregion
66713D13Mco20130138954376489543897Ratregion
66716D13Mco21120138721211787212232Ratregion
66718D13Mco22210138609270586092913Ratregion
67220D13Arb14402139243713692437538Ratregion
1631080D13Got242210139643006596430275Ratregion
1632068D13Got241122137965372579653847Ratregion
1632429D13Got240243138860064488600888Ratregion
1627949D8Got346139139672603696726088Ratregion
1628488D13Got244291139708485897085149Ratregion
1629033D13Uia11287139861860898618895Ratregion
1629662D13Ulb2283138701628487016569Ratregion
1638531D13Got269145138059976780599912Ratregion
1635055D13Wox19173138475723584757410Ratregion
1635734D13Got252190137766289277663077Ratregion
1636190D13Cebr1223139837659198376814Ratregion
1637270D13M1Mit110104137990120279901306Ratregion
1637629D13Got23392137575828875758375Ratregion
1637645D13Wox25148137680490776805053Ratregion
7206022Olfr16733138543084585431578Ratregion
7206776RH647111107139375512393755154Ratregion
5035739WI-8450314139007785890078172Ratregion
5038772RH127324205139259474492594949Ratregion
5038818RH127350214138677873786778951Ratregion
5036087Atp1a2126138473271484732985Ratregion
5036127Crp152138516286385163015Ratregion
5038912RH127404189139701246397012652Ratregion
5038968RH127436216138483489584835111Ratregion
7206516UniSTS:54682078139007857290079099Ratregion
7206762ha2905772139048185890482630Ratregion
5036284W53272109138370325783703366Ratregion
5039210RH127575181139001066590010846Ratregion
5039038RH127477187138453055284530739Ratregion
5036753AU049094130138424181584241946Ratregion
5033989RH140936180137488650874886688Ratregion
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5083377AA81891396138377003883770134Ratregion
5083553BI282704200138188812281888322Ratregion
5083681BF418092109139652043696520545Ratregion
5086731AA850497180137626386676264046Ratregion
5086737AI103728204139293703992937243Ratregion
5086750BQ205850151139258844592588596Ratregion
5086811BE107361159139091575890915917Ratregion
5085764BQ199481188139700986997010057Ratregion
5085882AI013247235138497361184973846Ratregion
5502591RH125476105138783685087836955Ratregion
5503172ksks277473139007857990079052Ratregion
5503430G39607303139823146998231772Ratregion
5507650UniSTS:142997110139271668192716791Ratregion
5507654AA10906589137946028579460848Ratregion
5507723STS-F042111569138006650780068076Ratregion
5504086Enah1147139364000993641156Ratregion
5504462PMC21147P294138377258483772678Ratregion
5504526PMC26746P1117138459942284600242Ratregion
5504240AL03359184138050954580509629Ratregion
5504418PMC197251P5483137811728278117765Ratregion
5504262G43283140138370269283702832Ratregion
5504302D1S1950E96138944639289446488Ratregion
5504326D1S2071E127138379008783790214Ratregion
5504963F11r95138389426483894602Ratregion
5505259Eef1g393138413809884138492Ratregion
5505520D8S5041101139589853995899640Ratregion
5505849UniSTS:49594291139960863899608729Ratregion
5505859UniSTS:49595793138188321281883305Ratregion
5506246UniSTS:502442013100574246100575760Ratregion
5506537HNRPU_1518862139007765590078517Ratregion
5506708G42043206138465403184654237Ratregion
5506710G42060149138409976184099910Ratregion
5507177UniSTS:224971148139826113398261281Ratregion
5507197UniSTS:225246196139026666990266806Ratregion
5506919G49234138138466121984661357Ratregion
5507233G64925160138468101484681174Ratregion
5507237G64928138138483133584831473Ratregion
5499723UniSTS:234290221139206924292069463Ratregion
5499721UniSTS:234254363137574571875746081Ratregion
5500278D13S1219128138031395480314082Ratregion
5500461C86794249139007937590079858Ratregion
5502951Zfp238917138944331989444237Ratregion
5500735AFM310VE11531137542868775430218Ratregion
5503404A007A33169139007846690079084Ratregion
5501447Tagln2198138497177684972365Ratregion
5504686PMC48141P4775137498570074986475Ratregion
5504690PMC48141P5200137498627574986475Ratregion
5501916MARC_17431-17432:1022875841:6473139268642792686900Ratregion
5501950MARC_20677-20678:1024509130:1216139007842790079092Ratregion
5502094MARC_4129-4130:996679399:10138384960283850296Ratregion
5501860MARC_16101-16102:1018026133:1265138193965881940647Ratregion
5502064MARC_26419-26420:1036768776:5490139007785290078342Ratregion
5506704G42052229138478442084784649Ratregion
5506767G45242145138283888982839034Ratregion
5502415RH1247840138465714284657336Ratregion
6893294D13Hmgc486194137573670375736899Ratregion
6893296D13Hmgc871149137583427575834424Ratregion
Position Markers

Flank 1: (D13Rat32)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21374,862,117 - 74,862,225 (+)MAPPER
Rnor_6.01380,403,559 - 80,403,666NCBI
Rnor_5.01385,295,639 - 85,295,746UniSTS
RGSC_v3.41378,189,125 - 78,189,379RGD
RGSC_v3.41378,189,257 - 78,189,364UniSTS
RGSC_v3.11378,203,445 - 78,203,552RGD
Celera1374,612,920 - 74,613,027UniSTS
RH 3.4 Map13468.2UniSTS
RH 3.4 Map13468.2RGD
RH 2.0 Map13507.8RGD
SHRSP x BN Map1330.5998RGD
FHH x ACI Map1330.36RGD
Peak: (D13Rat86)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21387,603,589 - 87,603,819 (+)MAPPER
Rnor_6.01393,730,745 - 93,730,972NCBI
Rnor_5.01398,195,014 - 98,195,241UniSTS
RGSC_v3.41391,410,706 - 91,411,049RGD
RGSC_v3.41391,410,756 - 91,410,983UniSTS
RGSC_v3.11391,599,640 - 91,599,867RGD
Celera1387,202,018 - 87,202,245UniSTS
RH 3.4 Map13586.0UniSTS
RH 3.4 Map13586.0RGD
RH 2.0 Map13633.9RGD
SHRSP x BN Map1340.7498RGD
Cytogenetic Map13q25UniSTS
Flank 2: (D13Rat51)
Rat AssemblyChrPosition (strand)Source
mRatBN7.213101,339,738 - 101,339,893 (-)MAPPER
Rnor_6.013108,770,533 - 108,770,687NCBI
Rnor_5.013113,387,011 - 113,387,165UniSTS
RGSC_v3.413106,075,835 - 106,076,220RGD
RGSC_v3.413106,075,880 - 106,076,034UniSTS
RGSC_v3.113106,264,984 - 106,265,138RGD
Celera13100,825,348 - 100,825,502UniSTS
RH 3.4 Map13695.0RGD
RH 3.4 Map13695.0UniSTS
RH 2.0 Map13741.1RGD
FHH x ACI Map1360.04RGD
Cytogenetic Map13q27UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)131101056920Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)131101056920Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)131101056920Rat
1581554Pur11Proteinuria QTL 11urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13599483377046787Rat
1581573Uae36Urinary albumin excretion QTL 36urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13599483377046787Rat
1581570Eae17Experimental allergic encephalomyelitis QTL 174.1nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)138897350101631289Rat
7207885Glom27Glomerulus QTL 273.9kidney glomerulus integrity trait (VT:0010546)kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)1320605871101339738Rat
1354621Rf47Renal function QTL 473.7kidney renin amount (VT:0010559)kidney renin level (CMO:0002166)1330395351101056920Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)133124133193395974Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)133124133193395974Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133124133193395974Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)133124133193395974Rat
2303563Bw89Body weight QTL 896body mass (VT:0001259)body weight (CMO:0000012)133228447177284471Rat
61340Bp25Blood pressure QTL 254.20.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133453521879535218Rat
12879477Bp401Blood pressure QTL 401arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)133726209282262092Rat
61349Bp31Blood pressure QTL 315.75arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)133737450982374509Rat
70220Bp55Blood pressure QTL 555.75arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)133737450982374509Rat
4889861Pur29Proteinuria QTL 2913.80.005total urine protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)133741558480753406Rat
1331750Bp220Blood pressure QTL 2202.98arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)133741558482415584Rat
1549897Stresp12Stress response QTL 123.35stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)133843340883433408Rat
619615Bp80Blood pressure QTL 800.0354arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133975454484754544Rat
12879444Bp397Blood pressure QTL 397arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)134504940490049404Rat
12879471Bp398Blood pressure QTL 398arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)134551471990514719Rat
12879441Bp396Blood pressure QTL 396arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)134569998390699983Rat
1298066Bp159Blood pressure QTL 1590.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134608804691088046Rat
71119Thym2Thymus enlargement QTL 23.8thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)134619797684753113Rat
1641901Alcrsp6Alcohol response QTL 6response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)135236217197362171Rat
1354655Bp241Blood pressure QTL 2413.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1356056920101056920Rat
724564Uae11Urinary albumin excretion QTL 115.7urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)135949252277046890Rat
738026Lnnr5Liver neoplastic nodule remodeling QTL 53.29liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)135987440885581182Rat
12879475Bp400Blood pressure QTL 400arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1361825626106807694Rat
2293702Bss34Bone structure and strength QTL 344.610.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)1365103704106807694Rat
2293687Bss26Bone structure and strength QTL 264.60.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)1365103704106807694Rat
8655951Rf63Renal function QTL 6312.2blood urea nitrogen amount (VT:0005265)plasma urea nitrogen level (CMO:0000586)136906051977046890Rat
8655945Rf61Renal function QTL 613.6blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)136906051986800898Rat
1331783Bp221Blood pressure QTL 2213.72886arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)136906051986800898Rat
1300166Kidm6Kidney mass QTL 63.93kidney mass (VT:0002707)single kidney wet weight to body weight ratio (CMO:0000622)136906051986800898Rat
11530006Niddm72Non-insulin dependent diabetes mellitus QTL 720.001blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)137402391880753406Rat
8655959Pur32Proteinuria QTL 328.4total urine protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)137402391897213863Rat
738027Lnnr6Liver neoplastic nodule remodeling QTL 63.3liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)137486211785581182Rat
2293341Glom15Glomerulus QTL 159.1kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)1374862117101339893Rat
4889606Gluco63Glucose level QTL 632.860.003blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1380753256106807694Rat
1302791Stl29Serum triglyceride level QTL 293.30.0011blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)138473078886800898Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general this region was responsible for 12.9% of the genetic variance in glomerular macrophage infiltration 2293335
qtl_general number of animals used: 200-220g, 177 F2 males 2293335
qtl_general measurement method: 10 days after induction, rats were killed and blood collected from the abdominal aorta and organs collected 2293335
qtl_general inducing agent: intravenous injection of 0.1ml of rabbit nephrotoxic serum to rat glomerular basement membrane 2293335
qtl_general 3 copies of Fcgr3 gene are responsible for the susceptibility to immunologically mediated glomerulonephritis 2293335
qtl_general Fgcr2 had a SNP G388T that changed codon 103 from arginine in LEW/NHsd to leucine in WKY/NCrl 2293335