Mpz (Chinchilla lanigera - long-tailed chinchilla) |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChiLan1.0 Ensembl | NW_004955468 | 13,041,011 - 13,047,284 (-) | Ensembl | | ChiLan1.0 Ensembl | | | ChiLan1.0 | NW_004955468 | 13,041,911 - 13,047,026 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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MPZ (Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCh38 | 1 | 161,303,600 - 161,309,968 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 1 | 161,304,735 - 161,309,974 (-) | Ensembl | | GRCh38.p14 Ensembl | hg38 | GRCh38 | GRCh37 | 1 | 161,274,525 - 161,279,758 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 1 | 159,541,151 - 159,546,377 (-) | NCBI | Build 36 | Build 36 | hg18 | NCBI36 | Build 34 | 1 | 158,087,599 - 158,092,817 | NCBI | | | | | Celera | 1 | 134,341,666 - 134,346,903 (-) | NCBI | | Celera | | | Cytogenetic Map | 1 | q23.3 | NCBI | | | | | HuRef | 1 | 132,631,395 - 132,636,601 (-) | NCBI | | HuRef | | | CHM1_1 | 1 | 162,670,753 - 162,675,990 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 1 | 160,441,004 - 160,447,413 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Mpz (Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCm39 | 1 | 170,978,282 - 170,988,699 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 1 | 170,978,280 - 170,988,699 (+) | Ensembl | | GRCm39 Ensembl | | GRCm39 | GRCm38 | 1 | 171,150,713 - 171,161,130 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 1 | 171,150,711 - 171,161,130 (+) | Ensembl | | GRCm38.p6 Ensembl | mm10 | GRCm38 | MGSCv37 | 1 | 173,080,844 - 173,091,254 (+) | NCBI | MGSCv37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 1 | 172,987,388 - 172,997,798 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 1 | 173,598,959 - 173,609,357 (+) | NCBI | | Celera | | | Cytogenetic Map | 1 | H3 | NCBI | | | | | cM Map | 1 | 79.05 | NCBI | | | | |
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Mpz (Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCr8 | 13 | 86,103,290 - 86,109,156 (+) | NCBI | GRCr8 | GRCr8 | | GRCr8 | GRCr8 Ensembl | 13 | 86,103,290 - 86,109,155 (+) | Ensembl | | | | GRCr8 | mRatBN7.2 | 13 | 83,570,811 - 83,576,680 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 13 | 83,570,811 - 83,576,679 (+) | Ensembl | | | | mRatBN7.2 | UTH_Rnor_SHR_Utx | 13 | 86,076,519 - 86,082,418 (+) | NCBI | UTH_Rnor_SHR_Utx | | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 13 | 87,474,755 - 87,480,657 (+) | NCBI | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | | UTH_Rnor_WKY_Bbb_1.0 | 13 | 84,706,501 - 84,712,211 (+) | NCBI | UTH_Rnor_WKY_Bbb_1.0 | | | | Dahl_SR_JrHsd | 13 | 85,471,212 - 85,477,075 (+) | NCBI | | | | | Lyon_Normotensive | 13 | 85,682,307 - 85,688,173 (+) | NCBI | | | | | Lyon_Hypertensive | 13 | 85,612,871 - 85,618,737 (+) | NCBI | | | | | F344_StmMcwi | 13 | 85,677,380 - 85,683,255 (+) | NCBI | | | | | Rnor_6.0 | 13 | 89,524,204 - 89,530,070 (+) | NCBI | Rnor_6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 13 | 89,524,329 - 89,530,068 (+) | Ensembl | | Rnor_6.0 Ensembl | rn6 | Rnor6.0 | Rnor_5.0 | 13 | 94,151,850 - 94,156,749 (+) | NCBI | Rnor_5.0 | Rnor_5.0 | rn5 | | RGSC_v3.4 | 13 | 87,040,479 - 87,045,378 (+) | NCBI | RGSC_v3.4 | RGSC_v3.4 | rn4 | | Celera | 13 | 83,202,202 - 83,207,991 (+) | NCBI | | Celera | | | RGSC_v3.1 | 13 | 87,229,362 - 87,234,262 (+) | NCBI | | | | | Cytogenetic Map | 13 | q24 | NCBI | | | | |
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MPZ (Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
NHGRI_mPanPan1-v2 | 1 | 88,543,449 - 88,573,944 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 1 | 88,233,764 - 88,264,228 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 1 | 136,691,245 - 136,720,958 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 1 | 140,603,609 - 140,631,273 (-) | NCBI | PanPan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 1 | 140,626,039 - 140,631,273 (-) | Ensembl | | PanPan1.1 Ensembl | panPan2 | panpan1.1 |
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MPZ (Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
CanFam3.1 | 38 | 21,205,339 - 21,210,439 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 38 | 21,205,107 - 21,210,451 (+) | Ensembl | | CanFam3.1 Ensembl | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 38 | 21,280,251 - 21,285,323 (+) | NCBI | Dog10K_Boxer_Tasha | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 38 | 21,323,207 - 21,328,277 (+) | NCBI | ROS_Cfam_1.0 | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 38 | 21,323,098 - 21,328,270 (+) | Ensembl | | | | ROS_Cfam_1.0 Ensembl | UMICH_Zoey_3.1 | 38 | 21,220,355 - 21,225,416 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 38 | 21,626,466 - 21,631,518 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 38 | 22,034,738 - 22,039,792 (+) | NCBI | UU_Cfam_GSD_1.0 | UU_Cfam_GSD_1.0 | | |
|
Mpz (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
| Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
mIctTri1.hap1 | 11 | 116,655,280 - 116,660,506 (+) | NCBI | | mIctTri1.hap1 | | | HiC_Itri_2 | NW_024405058 | 7,375,284 - 7,380,521 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936903 | 583,942 - 589,160 (-) | Ensembl | | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936903 | 583,942 - 589,160 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
MPZ (Sus scrofa - pig) |
| Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
Sscrofa11.1 Ensembl | 4 | 89,169,311 - 89,179,925 (+) | Ensembl | | Sscrofa11.1 Ensembl | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 4 | 89,174,107 - 89,179,556 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 4 | 97,031,478 - 97,036,934 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
MPZ (Chlorocebus sabaeus - green monkey) |
| Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
mChlSab1.0.hap1 | 20 | 1,980,582 - 1,985,793 (+) | NCBI | | mChlSab1.0.hap1 | | | Vero_WHO_p1.0 | NW_023666038 | 1,720,210 - 1,725,435 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | | ChlSab1.1 | 20 | 2,662,163 - 2,668,393 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 20 | 2,665,737 - 2,668,393 (+) | Ensembl | | ChlSab1.1 Ensembl | chlSab2 | Vervet-AGM |
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Mpz (Heterocephalus glaber - naked mole-rat) |
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Mpz (Rattus rattus - black rat) |
|