RORC (RAR related orphan receptor C) - Rat Genome Database

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Gene: RORC (RAR related orphan receptor C) Homo sapiens
Analyze
Symbol: RORC
Name: RAR related orphan receptor C
RGD ID: 1317896
HGNC Page HGNC:10260
Description: Enables several functions, including DNA-binding transcription repressor activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and oxysterol binding activity. Involved in cellular response to sterol and negative regulation of transcription by RNA polymerase II. Located in nuclear body. Implicated in immunodeficiency 42.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: IMD42; MGC129539; NR1F3; nuclear receptor ROR-gamma; nuclear receptor RZR-gamma; nuclear receptor subfamily 1 group F member 3; RAR-related orphan nuclear receptor variant 2; RAR-related orphan receptor C; RAR-related orphan receptor C, isoform a; RAR-related orphan receptor gamma; retinoic acid-binding receptor gamma; retinoid-related orphan receptor gamma; retinoid-related orphan receptor-gamma; RORG; RZR-GAMMA; RZRG; TOR
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Candidate Gene For: GLUCO119_H
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381151,806,071 - 151,831,802 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1151,806,071 - 151,831,845 (-)EnsemblGRCh38hg38GRCh38
GRCh371151,778,547 - 151,804,278 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361150,045,171 - 150,070,972 (-)NCBINCBI36Build 36hg18NCBI36
Build 341148,591,621 - 148,617,421NCBI
Celera1124,893,230 - 124,919,042 (-)NCBICelera
Cytogenetic Map1q21.3NCBI
HuRef1123,155,515 - 123,181,337 (-)NCBIHuRef
CHM1_11153,173,871 - 153,199,672 (-)NCBICHM1_1
T2T-CHM13v2.01150,929,559 - 150,955,307 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-Tetrandrine  (ISO)
1,2-dimethylhydrazine  (ISO)
1-naphthyl isothiocyanate  (ISO)
14-Deoxy-11,12-didehydroandrographolide  (EXP)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (EXP,ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-tert-butylhydroquinone  (ISO)
25-hydroxycholesterol  (EXP)
3-chloropropane-1,2-diol  (ISO)
3-phenoxybenzoic acid  (EXP)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
aflatoxin B1  (EXP)
alloxan  (ISO)
alpha-galactosylceramide  (ISO)
alpha-Zearalanol  (ISO)
arsane  (EXP,ISO)
arsenic atom  (EXP,ISO)
arsenous acid  (EXP)
azoxystrobin  (EXP,ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[b]fluoranthene  (ISO)
bifenthrin  (EXP)
biochanin A  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bromuconazole  (ISO)
buspirone  (ISO)
buta-1,3-diene  (ISO)
butanal  (EXP)
C60 fullerene  (ISO)
cadmium atom  (EXP,ISO)
cadmium dichloride  (EXP)
calciol  (ISO)
calcitriol  (EXP)
cannabidiol  (ISO)
carbamazepine  (ISO)
carbon nanotube  (ISO)
chloroprene  (ISO)
chlorpyrifos  (ISO)
chrysene  (ISO)
chrysin  (ISO)
clofibrate  (ISO)
copper(II) chloride  (EXP)
cyclophosphamide  (ISO)
cycloprothrin  (EXP)
cyclosporin A  (EXP)
cyhalothrin  (EXP)
dexamethasone  (ISO)
dextran sulfate  (ISO)
diarsenic trioxide  (EXP)
diazinon  (ISO)
diclofenac  (ISO)
digoxigenin  (EXP)
digoxin  (ISO)
dihydroouabain  (EXP)
endosulfan  (EXP,ISO)
epoxiconazole  (ISO)
flucloxacillin  (ISO)
flutamide  (ISO)
fluvalinate  (EXP)
folic acid  (EXP,ISO)
formaldehyde  (EXP)
fragrance  (EXP)
gentamycin  (ISO)
glafenine  (ISO)
glycyrrhetinate  (ISO)
glycyrrhetinic acid  (ISO)
glyphosate  (ISO)
helveticoside  (EXP)
hexaconazole  (ISO)
hydroxysafflor yellow A  (ISO)
imidacloprid  (ISO)
imiquimod  (ISO)
indoxyl sulfate  (ISO)
lead diacetate  (EXP)
lead(0)  (ISO)
leflunomide  (ISO)
levamisole  (ISO)
methamphetamine  (ISO)
mevalonic acid  (EXP)
N-Nitrosopyrrolidine  (EXP)
nefazodone  (ISO)
nickel atom  (EXP)
nimesulide  (ISO)
O-methyleugenol  (EXP)
ozone  (ISO)
paracetamol  (EXP,ISO)
paraquat  (ISO)
perfluorohexanesulfonic acid  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (ISO)
phenobarbital  (ISO)
pioglitazone  (ISO)
pirinixic acid  (ISO)
platycodin D  (ISO)
pregnenolone 16alpha-carbonitrile  (ISO)
prostaglandin D2  (ISO)
prostaglandin E2  (EXP)
rofecoxib  (EXP)
S-butyl-DL-homocysteine (S,R)-sulfoximine  (ISO)
simvastatin  (EXP)
sodium arsenite  (EXP,ISO)
strophanthidin  (EXP)
sulforaphane  (EXP)
tetrachloromethane  (ISO)
tetraphene  (ISO)
thiabendazole  (ISO)
thioacetamide  (ISO)
thymoquinone  (ISO)
tofacitinib  (ISO)
toluene 2,4-diisocyanate  (ISO)
trichloroethene  (ISO)
triflumizole  (ISO)
triphenyl phosphate  (EXP)
Triptolide  (EXP,ISO)
triptonide  (ISO)
Tryptanthrine  (EXP)
urethane  (EXP)
ursodeoxycholic acid  (ISO)
valdecoxib  (ISO)
valproic acid  (EXP,ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
chromatin  (ISA)
external side of plasma membrane  (ISO)
nuclear body  (IDA)
nucleoplasm  (IEA,TAS)
nucleus  (IBA,IDA,IEA,ISS)

References

References - curated
# Reference Title Reference Citation
1. Regulatory T cell activity is partly inhibited in a mouse model of chronic Pseudomonas aeruginosa lung infection. Ding FM, etal., Exp Lung Res. 2015 Feb;41(1):44-55. doi: 10.3109/01902148.2014.964351. Epub 2014 Nov 14.
2. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
5. Bupi Hewei decoction ameliorates 5-fluorouracil-induced intestinal dysbiosis in rats through T helper 17/T regulatory cell signaling pathway. Sun Z, etal., J Tradit Chin Med. 2020 Feb;40(1):38-48.
6. The Treg/Th17 imbalance in Toxoplasma gondii-infected pregnant mice. Zhang H, etal., Am J Reprod Immunol. 2012 Feb;67(2):112-21. doi: 10.1111/j.1600-0897.2011.01065.x. Epub 2011 Sep 19.
7. Fibrinogen-like protein-2 causes deterioration in cardiac function in experimental autoimmune myocarditis rats through regulation of programmed death-1 and inflammatory cytokines. Zheng Z, etal., Immunology. 2018 Feb;153(2):246-252. doi: 10.1111/imm.12837. Epub 2017 Oct 16.
Additional References at PubMed
PMID:7811290   PMID:8125298   PMID:9403063   PMID:10405182   PMID:10602018   PMID:10875923   PMID:10963675   PMID:11076863   PMID:11230166   PMID:11983153   PMID:12477932   PMID:12855222  
PMID:14702039   PMID:15144897   PMID:15489334   PMID:15489336   PMID:15604093   PMID:16381901   PMID:16712791   PMID:17240331   PMID:17504012   PMID:18368049   PMID:18434325   PMID:18564921  
PMID:19029904   PMID:19112760   PMID:19274049   PMID:19439651   PMID:19449310   PMID:19648312   PMID:19692128   PMID:19965867   PMID:20106535   PMID:20203100   PMID:20211758   PMID:20379614  
PMID:20427770   PMID:20450585   PMID:21391996   PMID:21426710   PMID:21455110   PMID:21566134   PMID:21791252   PMID:21873635   PMID:21988832   PMID:22058032   PMID:22170608   PMID:22237416  
PMID:22326581   PMID:22404826   PMID:22891280   PMID:22989874   PMID:23043388   PMID:23128233   PMID:23211525   PMID:23327801   PMID:23409930   PMID:23555304   PMID:23726039   PMID:23765061  
PMID:23990625   PMID:24317395   PMID:24516202   PMID:24668754   PMID:24812667   PMID:24911119   PMID:25070893   PMID:25292313   PMID:25341687   PMID:25491772   PMID:25499021   PMID:25527718  
PMID:25552913   PMID:25740946   PMID:25769926   PMID:25821221   PMID:25872376   PMID:25873156   PMID:26160376   PMID:26267538   PMID:26319393   PMID:26330273   PMID:26415373   PMID:26434354  
PMID:26453305   PMID:26474968   PMID:26498317   PMID:26549310   PMID:26564244   PMID:26640126   PMID:26878233   PMID:27019329   PMID:27043554   PMID:27082299   PMID:27178467   PMID:27211549  
PMID:27256574   PMID:27374797   PMID:27413074   PMID:27430721   PMID:27481185   PMID:27542227   PMID:27693422   PMID:27706126   PMID:27791279   PMID:27875659   PMID:27926504   PMID:28027708  
PMID:28300844   PMID:28473536   PMID:28514442   PMID:28546429   PMID:28667162   PMID:28763457   PMID:28849203   PMID:28943467   PMID:29198133   PMID:29775622   PMID:29866105   PMID:30009847  
PMID:30045265   PMID:30138899   PMID:30303535   PMID:30602780   PMID:30808674   PMID:30992047   PMID:31172947   PMID:31235702   PMID:31287590   PMID:31505409   PMID:31586073   PMID:31781621  
PMID:31856612   PMID:31877441   PMID:31926494   PMID:32296183   PMID:32532834   PMID:32584473   PMID:32670274   PMID:32707421   PMID:32727079   PMID:32866740   PMID:32960152   PMID:33068674  
PMID:33506937   PMID:33536342   PMID:33633027   PMID:33771687   PMID:33961781   PMID:34135062   PMID:34183838   PMID:34252205   PMID:34547329   PMID:34673799   PMID:34819367   PMID:37071682  
PMID:38722677  


Genomics

Comparative Map Data
RORC
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381151,806,071 - 151,831,802 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1151,806,071 - 151,831,845 (-)EnsemblGRCh38hg38GRCh38
GRCh371151,778,547 - 151,804,278 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361150,045,171 - 150,070,972 (-)NCBINCBI36Build 36hg18NCBI36
Build 341148,591,621 - 148,617,421NCBI
Celera1124,893,230 - 124,919,042 (-)NCBICelera
Cytogenetic Map1q21.3NCBI
HuRef1123,155,515 - 123,181,337 (-)NCBIHuRef
CHM1_11153,173,871 - 153,199,672 (-)NCBICHM1_1
T2T-CHM13v2.01150,929,559 - 150,955,307 (-)NCBIT2T-CHM13v2.0
Rorc
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39394,280,106 - 94,305,583 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl394,280,101 - 94,305,583 (+)EnsemblGRCm39 Ensembl
GRCm38394,372,794 - 94,398,276 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl394,372,794 - 94,398,276 (+)EnsemblGRCm38mm10GRCm38
MGSCv37394,176,748 - 94,202,161 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36394,458,190 - 94,483,992 (+)NCBIMGSCv36mm8
Celera395,819,177 - 95,843,048 (+)NCBICelera
Cytogenetic Map3F2.1NCBI
cM Map340.56NCBI
Rorc
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82184,698,779 - 184,723,942 (+)NCBIGRCr8
mRatBN7.22182,009,707 - 182,034,910 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2182,009,286 - 182,034,907 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.02195,612,471 - 195,636,797 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2195,617,021 - 195,637,630 (+)EnsemblRnor6.0rn6Rnor6.0
RGSC_v3.42189,345,134 - 189,369,442 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera2174,560,165 - 174,584,474 (+)NCBICelera
Cytogenetic Map2q34NCBI
Rorc
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955589590,743 - 616,694 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955589590,653 - 616,784 (+)NCBIChiLan1.0ChiLan1.0
RORC
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2197,991,871 - 98,017,622 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1197,743,055 - 97,768,831 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01127,164,725 - 127,190,479 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11130,808,705 - 130,834,490 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1130,808,705 - 130,834,490 (-)Ensemblpanpan1.1panPan2
RORC
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11760,821,498 - 60,842,485 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1760,821,981 - 60,842,453 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1760,263,366 - 60,285,188 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01761,838,557 - 61,860,379 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1761,837,962 - 61,860,343 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11760,665,332 - 60,687,158 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01760,751,477 - 60,773,308 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01761,480,593 - 61,502,436 (-)NCBIUU_Cfam_GSD_1.0
Rorc
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505822,967,256 - 22,990,222 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365801,997,640 - 2,020,649 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365801,997,640 - 2,020,649 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RORC
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl497,375,136 - 97,400,209 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1497,374,672 - 97,399,017 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24106,397,490 - 106,421,980 (+)NCBISscrofa10.2Sscrofa10.2susScr3
RORC
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12011,854,911 - 11,880,221 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2011,855,005 - 11,879,717 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603811,414,109 - 11,440,149 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rorc
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462477219,477,093 - 19,501,169 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462477219,478,403 - 19,501,184 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in RORC
275 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
NM_005060.3(RORC):c.846G>A (p.Arg282=) single nucleotide variant Malignant melanoma [RCV000064141] Chr1:151814661 [GRCh38]
Chr1:151787137 [GRCh37]
Chr1:150053761 [NCBI36]
Chr1:1q21.3
not provided
NM_005060.3(RORC):c.845G>A (p.Arg282Lys) single nucleotide variant Malignant melanoma [RCV000064142] Chr1:151814662 [GRCh38]
Chr1:151787138 [GRCh37]
Chr1:150053762 [NCBI36]
Chr1:1q21.3
not provided
NM_005060.3(RORC):c.409C>T (p.Pro137Ser) single nucleotide variant Malignant melanoma [RCV000064143] Chr1:151815315 [GRCh38]
Chr1:151787791 [GRCh37]
Chr1:150054415 [NCBI36]
Chr1:1q21.3
not provided
NM_005060.3(RORC):c.309C>T (p.Phe103=) single nucleotide variant Malignant melanoma [RCV000064144] Chr1:151815415 [GRCh38]
Chr1:151787891 [GRCh37]
Chr1:150054515 [NCBI36]
Chr1:1q21.3
not provided
NM_005060.4(RORC):c.422C>T (p.Ala141Val) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001065352]|not provided [RCV000122518] Chr1:151815302 [GRCh38]
Chr1:151787778 [GRCh37]
Chr1:1q21.3
uncertain significance
GRCh38/hg38 1q21.2-25.2(chr1:149854269-180267197)x3 copy number gain See cases [RCV000143515] Chr1:149854269..180267197 [GRCh38]
Chr1:149825831..180236332 [GRCh37]
Chr1:148092455..178502955 [NCBI36]
Chr1:1q21.2-25.2
pathogenic
NM_005060.4(RORC):c.985C>T (p.Gln329Ter) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV000201359] Chr1:151813569 [GRCh38]
Chr1:151786045 [GRCh37]
Chr1:1q21.3
pathogenic
NM_005060.4(RORC):c.1321C>T (p.Gln441Ter) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV000201397] Chr1:151811399 [GRCh38]
Chr1:151783875 [GRCh37]
Chr1:1q21.3
pathogenic|uncertain significance
NM_005060.4(RORC):c.113C>T (p.Ser38Leu) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV000201419] Chr1:151817238 [GRCh38]
Chr1:151789714 [GRCh37]
Chr1:1q21.3
pathogenic
GRCh37/hg19 1q21.1-21.3(chr1:144927578-153223600)x3 copy number gain Chromosome 1q21.1 duplication syndrome [RCV000223957] Chr1:144927578..153223600 [GRCh37]
Chr1:1q21.1-21.3
pathogenic
NM_005060.4(RORC):c.1477G>A (p.Val493Met) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001324956]|not specified [RCV000238770] Chr1:151807552 [GRCh38]
Chr1:151780028 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.749G>A (p.Ser250Asn) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV000529290]|not provided [RCV003409825] Chr1:151814975 [GRCh38]
Chr1:151787451 [GRCh37]
Chr1:1q21.3
likely benign
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684)x3 copy number gain See cases [RCV000510383] Chr1:849467..249224684 [GRCh37]
Chr1:1p36.33-q44
pathogenic
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684) copy number gain See cases [RCV000510926] Chr1:849467..249224684 [GRCh37]
Chr1:1p36.33-q44
pathogenic
NM_005060.4(RORC):c.186C>T (p.Asn62=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV000540237]|not provided [RCV004714075] Chr1:151816776 [GRCh38]
Chr1:151789252 [GRCh37]
Chr1:1q21.3
benign
NM_005060.4(RORC):c.28C>T (p.Arg10Ter) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV000555512]|RORC-related disorder [RCV003925719] Chr1:151831737 [GRCh38]
Chr1:151831737..151831738 [GRCh38]
Chr1:151804213 [GRCh37]
Chr1:151804213..151804214 [GRCh37]
Chr1:1q21.3
likely benign|conflicting interpretations of pathogenicity|uncertain significance
NM_005060.4(RORC):c.1125G>A (p.Thr375=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV000652791] Chr1:151813288 [GRCh38]
Chr1:151785764 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.990C>T (p.Tyr330=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV000652792]|not provided [RCV001703228] Chr1:151813564 [GRCh38]
Chr1:151786040 [GRCh37]
Chr1:1q21.3
benign|likely benign
NM_005060.4(RORC):c.33C>T (p.Ala11=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV000652793] Chr1:151831732 [GRCh38]
Chr1:151804208 [GRCh37]
Chr1:1q21.3
benign
NM_005060.4(RORC):c.1070C>T (p.Ala357Val) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV000652787] Chr1:151813343 [GRCh38]
Chr1:151785819 [GRCh37]
Chr1:1q21.3
likely benign|uncertain significance
NM_005060.4(RORC):c.595T>C (p.Ser199Pro) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV000652788] Chr1:151815129 [GRCh38]
Chr1:151787605 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.1247A>G (p.Glu416Gly) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV000652789] Chr1:151812985 [GRCh38]
Chr1:151785461 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.489G>A (p.Ser163=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV000652790] Chr1:151815235 [GRCh38]
Chr1:151787711 [GRCh37]
Chr1:1q21.3
benign
GRCh37/hg19 1q21.3(chr1:150853044-154647786)x3 copy number gain not provided [RCV000684655] Chr1:150853044..154647786 [GRCh37]
Chr1:1q21.3
pathogenic
NM_005060.4(RORC):c.253C>T (p.His85Tyr) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV000707497]|RORC-related disorder [RCV004751673]|not provided [RCV004691289] Chr1:151816709 [GRCh38]
Chr1:151789185 [GRCh37]
Chr1:1q21.3
uncertain significance
GRCh37/hg19 1p36.33-q44(chr1:47851-249228449)x3 copy number gain not provided [RCV000736295] Chr1:47851..249228449 [GRCh37]
Chr1:1p36.33-q44
pathogenic
GRCh37/hg19 1p36.33-q44(chr1:82154-249218992)x3 copy number gain not provided [RCV000736305] Chr1:82154..249218992 [GRCh37]
Chr1:1p36.33-q44
pathogenic
NM_005060.4(RORC):c.1067-4C>A single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV000918166]|not provided [RCV004715356] Chr1:151813350 [GRCh38]
Chr1:151785826 [GRCh37]
Chr1:1q21.3
benign
NM_005060.4(RORC):c.1286-10C>T single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001429250] Chr1:151811444 [GRCh38]
Chr1:151783920 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.1334A>G (p.Asn445Ser) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV000915579] Chr1:151811386 [GRCh38]
Chr1:151783862 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.1086G>C (p.Leu362=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001398427] Chr1:151813327 [GRCh38]
Chr1:151785803 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.1406A>G (p.Lys469Arg) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV000884930] Chr1:151807623 [GRCh38]
Chr1:151780099 [GRCh37]
Chr1:1q21.3
benign
NM_005060.4(RORC):c.622C>A (p.Arg208=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV000881854]|RORC-related disorder [RCV003920555] Chr1:151815102 [GRCh38]
Chr1:151787578 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.198C>G (p.Ser66=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001471943] Chr1:151816764 [GRCh38]
Chr1:151789240 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.987G>A (p.Gln329=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001416697] Chr1:151813567 [GRCh38]
Chr1:151786043 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.1118A>G (p.Asn373Ser) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001071141]|RORC-related disorder [RCV003413895] Chr1:151813295 [GRCh38]
Chr1:151785771 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.686G>A (p.Cys229Tyr) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001058561] Chr1:151815038 [GRCh38]
Chr1:151787514 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.1356T>A (p.His452Gln) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001060896] Chr1:151811364 [GRCh38]
Chr1:151783840 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.1456T>A (p.Phe486Ile) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV000793258] Chr1:151807573 [GRCh38]
Chr1:151780049 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.612C>T (p.Tyr204=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV000907051] Chr1:151815112 [GRCh38]
Chr1:151787588 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.312C>T (p.Gly104=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001480137] Chr1:151815412 [GRCh38]
Chr1:151787888 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.1488C>T (p.Ala496=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002065958] Chr1:151807541 [GRCh38]
Chr1:151780017 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.157-10C>T single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001480132] Chr1:151816815 [GRCh38]
Chr1:151789291 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.1391C>G (p.Ala464Gly) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV000958487]|RORC-related disorder [RCV004751834]|not provided [RCV001702864]|not specified [RCV001726389] Chr1:151811329 [GRCh38]
Chr1:151783805 [GRCh37]
Chr1:1q21.3
benign|likely benign
NM_005060.4(RORC):c.1545G>T (p.Gly515=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV000800954] Chr1:151807484 [GRCh38]
Chr1:151779960 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.560C>G (p.Ser187Cys) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV000797903]|Inborn genetic diseases [RCV003243305] Chr1:151815164 [GRCh38]
Chr1:151787640 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.754G>A (p.Gly252Ser) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV000819503] Chr1:151814970 [GRCh38]
Chr1:151787446 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.1328A>C (p.Gln443Pro) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV000821977] Chr1:151811392 [GRCh38]
Chr1:151783868 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.1099C>G (p.Arg367Gly) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV000803819] Chr1:151813314 [GRCh38]
Chr1:151785790 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.1284C>A (p.Ala428=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV000808617] Chr1:151812948 [GRCh38]
Chr1:151785424 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.1285C>T (p.His429Tyr) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV000812904]|not provided [RCV004691308] Chr1:151812947 [GRCh38]
Chr1:151785423 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.1239C>T (p.Ser413=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV000914763] Chr1:151812993 [GRCh38]
Chr1:151785469 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.245G>A (p.Arg82Gln) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV000792128]|Inborn genetic diseases [RCV003166089] Chr1:151816717 [GRCh38]
Chr1:151789193 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.694C>T (p.Arg232Cys) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV000795736] Chr1:151815030 [GRCh38]
Chr1:151787506 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.888C>T (p.Arg296=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV000939034] Chr1:151814619 [GRCh38]
Chr1:151787095 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.598T>C (p.Cys200Arg) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV000794337]|Inborn genetic diseases [RCV004027483] Chr1:151815126 [GRCh38]
Chr1:151787602 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.177G>C (p.Gln59His) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV000819406] Chr1:151816785 [GRCh38]
Chr1:151789261 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.20G>A (p.Arg7Lys) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV000803780] Chr1:151831745 [GRCh38]
Chr1:151804221 [GRCh37]
Chr1:1q21.3
uncertain significance
GRCh37/hg19 1q21.3(chr1:151798754-152306536)x3 copy number gain not provided [RCV001005138] Chr1:151798754..152306536 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.279G>A (p.Ala93=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV000936250] Chr1:151816683 [GRCh38]
Chr1:151789159 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.35C>T (p.Ser12Leu) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001226853]|RORC-related disorder [RCV003414024] Chr1:151831730 [GRCh38]
Chr1:151804206 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.1142A>T (p.Lys381Ile) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001239159] Chr1:151813271 [GRCh38]
Chr1:151785747 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.14C>G (p.Pro5Arg) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001242920] Chr1:151831751 [GRCh38]
Chr1:151804227 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.697T>C (p.Phe233Leu) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001203894] Chr1:151815027 [GRCh38]
Chr1:151787503 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.187G>A (p.Ala63Thr) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001204415] Chr1:151816775 [GRCh38]
Chr1:151789251 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.466G>A (p.Gly156Arg) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001211656]|Inborn genetic diseases [RCV004033823] Chr1:151815258 [GRCh38]
Chr1:151787734 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.931A>C (p.Lys311Gln) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001197549] Chr1:151814576 [GRCh38]
Chr1:151787052 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.1329G>A (p.Gln443=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001412184]|RORC-related disorder [RCV003920845] Chr1:151811391 [GRCh38]
Chr1:151783867 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.828C>T (p.Ser276=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001405990] Chr1:151814679 [GRCh38]
Chr1:151787155 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.465C>T (p.Asp155=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV000916735] Chr1:151815259 [GRCh38]
Chr1:151787735 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.1358A>T (p.His453Leu) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001035431] Chr1:151811362 [GRCh38]
Chr1:151783838 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.334G>A (p.Asp112Asn) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001219781] Chr1:151815390 [GRCh38]
Chr1:151787866 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.374G>A (p.Arg125Gln) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001219986]|Inborn genetic diseases [RCV004659405] Chr1:151815350 [GRCh38]
Chr1:151787826 [GRCh37]
Chr1:1q21.3
likely benign|uncertain significance
NM_005060.4(RORC):c.1391C>T (p.Ala464Val) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001051336] Chr1:151811329 [GRCh38]
Chr1:151783805 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.407C>A (p.Thr136Asn) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001224003]|Inborn genetic diseases [RCV004032494] Chr1:151815317 [GRCh38]
Chr1:151787793 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.38G>A (p.Arg13Gln) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001241332]|Inborn genetic diseases [RCV004034677] Chr1:151831727 [GRCh38]
Chr1:151804203 [GRCh37]
Chr1:1q21.3
likely benign|uncertain significance
NM_005060.4(RORC):c.708C>T (p.His236=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV000935620] Chr1:151815016 [GRCh38]
Chr1:151787492 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.675C>G (p.Thr225=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001461713] Chr1:151815049 [GRCh38]
Chr1:151787525 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.8G>A (p.Arg3Lys) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001047927] Chr1:151831757 [GRCh38]
Chr1:151804233 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.226G>A (p.Asp76Asn) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001034822] Chr1:151816736 [GRCh38]
Chr1:151789212 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.737A>C (p.Gln246Pro) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001056447] Chr1:151814987 [GRCh38]
Chr1:151787463 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.580G>A (p.Gly194Arg) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001201430] Chr1:151815144 [GRCh38]
Chr1:151787620 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.1003G>T (p.Ala335Ser) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001036223] Chr1:151813551 [GRCh38]
Chr1:151786027 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.1304A>G (p.Glu435Gly) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001205492] Chr1:151811416 [GRCh38]
Chr1:151783892 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.394C>T (p.Pro132Ser) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001058345] Chr1:151815330 [GRCh38]
Chr1:151787806 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.37C>T (p.Arg13Trp) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001217232]|Inborn genetic diseases [RCV004034024] Chr1:151831728 [GRCh38]
Chr1:151804204 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.40+1G>A single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001069749] Chr1:151831724 [GRCh38]
Chr1:151804200 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.711G>T (p.Arg237Ser) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001041366] Chr1:151815013 [GRCh38]
Chr1:151787489 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.1490C>T (p.Ala497Val) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001037724] Chr1:151807539 [GRCh38]
Chr1:151780015 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.1468C>T (p.His490Tyr) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001320181] Chr1:151807561 [GRCh38]
Chr1:151780037 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.1488C>A (p.Ala496=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001342714] Chr1:151807541 [GRCh38]
Chr1:151780017 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.188C>T (p.Ala63Val) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001312664] Chr1:151816774 [GRCh38]
Chr1:151789250 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.201C>T (p.Cys67=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001415171] Chr1:151816761 [GRCh38]
Chr1:151789237 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.1288C>T (p.Arg430Trp) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001370015] Chr1:151811432 [GRCh38]
Chr1:151783908 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.382C>G (p.Gln128Glu) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001338871] Chr1:151815342 [GRCh38]
Chr1:151787818 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.1401A>C (p.Pro467=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001414151] Chr1:151807628 [GRCh38]
Chr1:151780104 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.623G>A (p.Arg208Gln) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001343877]|Inborn genetic diseases [RCV003169657] Chr1:151815101 [GRCh38]
Chr1:151787577 [GRCh37]
Chr1:1q21.3
uncertain significance
NC_000001.10:g.(?_130980840)_(248900000_?)dup duplication Gastrointestinal stromal tumor [RCV001300221]|Parathyroid carcinoma [RCV001341077] Chr1:130980840..248900000 [GRCh37]
Chr1:1q12-44
uncertain significance
NM_005060.4(RORC):c.1535C>G (p.Ser512Ter) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001329360] Chr1:151807494 [GRCh38]
Chr1:151779970 [GRCh37]
Chr1:1q21.3
pathogenic|conflicting interpretations of pathogenicity|uncertain significance
NM_005060.4(RORC):c.880C>T (p.Arg294Trp) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001298892] Chr1:151814627 [GRCh38]
Chr1:151787103 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.852A>T (p.Thr284=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001394609] Chr1:151814655 [GRCh38]
Chr1:151787131 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.770G>A (p.Arg257His) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001367080] Chr1:151814954 [GRCh38]
Chr1:151787430 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.905G>A (p.Arg302Gln) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001307723] Chr1:151814602 [GRCh38]
Chr1:151787078 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.1427G>C (p.Cys476Ser) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001307197] Chr1:151807602 [GRCh38]
Chr1:151780078 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.64C>T (p.His22Tyr) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001371995]|Inborn genetic diseases [RCV004037519]|not provided [RCV004691433] Chr1:151829435 [GRCh38]
Chr1:151801911 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.955C>A (p.Arg319=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001464761] Chr1:151813599 [GRCh38]
Chr1:151786075 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.864G>A (p.Arg288=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001465778] Chr1:151814643 [GRCh38]
Chr1:151787119 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.264G>A (p.Leu88=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001403536] Chr1:151816698 [GRCh38]
Chr1:151789174 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.378A>G (p.Gln126=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001472149] Chr1:151815346 [GRCh38]
Chr1:151787822 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.471G>A (p.Gln157=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001404416] Chr1:151815253 [GRCh38]
Chr1:151787729 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.114G>A (p.Ser38=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001430044] Chr1:151817237 [GRCh38]
Chr1:151789713 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.327G>A (p.Lys109=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001401552] Chr1:151815397 [GRCh38]
Chr1:151787873 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.934-1G>A single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001379824] Chr1:151813621 [GRCh38]
Chr1:151786097 [GRCh37]
Chr1:1q21.3
likely pathogenic
NM_005060.4(RORC):c.420G>A (p.Gly140=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001429727] Chr1:151815304 [GRCh38]
Chr1:151787780 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.1125G>T (p.Thr375=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001502032] Chr1:151813288 [GRCh38]
Chr1:151785764 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.41-17C>T single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001511917]|not provided [RCV004715436]|not specified [RCV003399274] Chr1:151829475 [GRCh38]
Chr1:151801951 [GRCh37]
Chr1:1q21.3
benign
NM_005060.4(RORC):c.960T>C (p.Cys320=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001518527] Chr1:151813594 [GRCh38]
Chr1:151786070 [GRCh37]
Chr1:1q21.3
benign
NM_005060.4(RORC):c.1530C>T (p.Thr510=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001522938] Chr1:151807499 [GRCh38]
Chr1:151779975 [GRCh37]
Chr1:1q21.3
benign
NM_005060.4(RORC):c.1014C>T (p.Leu338=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001464709] Chr1:151813540 [GRCh38]
Chr1:151786016 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.1512G>A (p.Glu504=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001495958]|RORC-related disorder [RCV003980433] Chr1:151807517 [GRCh38]
Chr1:151779993 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.1089T>C (p.Val363=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001516586] Chr1:151813324 [GRCh38]
Chr1:151785800 [GRCh37]
Chr1:1q21.3
benign
NM_005060.4(RORC):c.156+9T>C single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001471186] Chr1:151817186 [GRCh38]
Chr1:151789662 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.812-9C>T single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001513975]|RORC-related disorder [RCV003921103] Chr1:151814704 [GRCh38]
Chr1:151787180 [GRCh37]
Chr1:1q21.3
benign|likely benign
NM_005060.4(RORC):c.780G>A (p.Pro260=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001461842] Chr1:151814944 [GRCh38]
Chr1:151787420 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.1101G>A (p.Arg367=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001418519] Chr1:151813312 [GRCh38]
Chr1:151785788 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.156+24A>C single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001794914]|not provided [RCV004714341]|not specified [RCV003401720] Chr1:151817171 [GRCh38]
Chr1:151789647 [GRCh37]
Chr1:1q21.3
benign
NM_005060.4(RORC):c.542G>C (p.Gly181Ala) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001874079]|Inborn genetic diseases [RCV004038995] Chr1:151815182 [GRCh38]
Chr1:151787658 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.395C>G (p.Pro132Arg) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001863743] Chr1:151815329 [GRCh38]
Chr1:151787805 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.1121G>A (p.Arg374His) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001929241] Chr1:151813292 [GRCh38]
Chr1:151785768 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.779C>T (p.Pro260Leu) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001915232] Chr1:151814945 [GRCh38]
Chr1:151787421 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.992T>C (p.Val331Ala) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001929134] Chr1:151813562 [GRCh38]
Chr1:151786038 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.863G>A (p.Arg288Gln) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002042786]|Inborn genetic diseases [RCV002642133] Chr1:151814644 [GRCh38]
Chr1:151787120 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.1395+17G>A single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001968525] Chr1:151811308 [GRCh38]
Chr1:151783784 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.29G>A (p.Arg10Gln) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001894684]|Inborn genetic diseases [RCV002551034] Chr1:151831736 [GRCh38]
Chr1:151804212 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.1124C>T (p.Thr375Met) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001872701]|Inborn genetic diseases [RCV002551137] Chr1:151813289 [GRCh38]
Chr1:151785765 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.1267C>G (p.Leu423Val) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001895420] Chr1:151812965 [GRCh38]
Chr1:151785441 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.1062A>G (p.Lys354=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001908650] Chr1:151813492 [GRCh38]
Chr1:151785968 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.67A>G (p.Thr23Ala) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002043292] Chr1:151829432 [GRCh38]
Chr1:151801908 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.1485A>G (p.Gln495=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001910735] Chr1:151807544 [GRCh38]
Chr1:151780020 [GRCh37]
Chr1:1q21.3
likely benign|uncertain significance
NM_005060.4(RORC):c.811+9C>G single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001872614] Chr1:151814904 [GRCh38]
Chr1:151787380 [GRCh37]
Chr1:1q21.3
likely benign|uncertain significance
NM_005060.4(RORC):c.373C>T (p.Arg125Trp) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001964790] Chr1:151815351 [GRCh38]
Chr1:151787827 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.83T>G (p.Val28Gly) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001942665] Chr1:151817268 [GRCh38]
Chr1:151789744 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.719G>A (p.Gly240Glu) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001954309] Chr1:151815005 [GRCh38]
Chr1:151787481 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.586A>C (p.Asn196His) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001962064] Chr1:151815138 [GRCh38]
Chr1:151787614 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.1250T>C (p.Ile417Thr) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001880379] Chr1:151812982 [GRCh38]
Chr1:151785458 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.239G>A (p.Arg80Gln) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001936441] Chr1:151816723 [GRCh38]
Chr1:151789199 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.812-8G>A single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001971945] Chr1:151814703 [GRCh38]
Chr1:151787179 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.634G>A (p.Glu212Lys) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001865031] Chr1:151815090 [GRCh38]
Chr1:151787566 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.1407G>C (p.Lys469Asn) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002048024] Chr1:151807622 [GRCh38]
Chr1:151780098 [GRCh37]
Chr1:1q21.3
uncertain significance
NC_000001.10:g.(?_149895434)_(156851434_?)dup duplication Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001958273]|Congenital neutropenia-myelofibrosis-nephromegaly syndrome [RCV001958271]|Kostmann syndrome [RCV003120769]|MHC class II deficiency [RCV001992607] Chr1:149895434..156851434 [GRCh37]
Chr1:1q21.2-23.1
uncertain significance
NM_005060.4(RORC):c.1447C>G (p.Leu483Val) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001981405] Chr1:151807582 [GRCh38]
Chr1:151780058 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.683G>A (p.Arg228Gln) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001884123] Chr1:151815041 [GRCh38]
Chr1:151787517 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.455G>C (p.Gly152Ala) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002018678] Chr1:151815269 [GRCh38]
Chr1:151787745 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.858G>T (p.Gln286His) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001960185] Chr1:151814649 [GRCh38]
Chr1:151787125 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.1198A>G (p.Ile400Val) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001906693] Chr1:151813034 [GRCh38]
Chr1:151785510 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.587A>G (p.Asn196Ser) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002030659] Chr1:151815137 [GRCh38]
Chr1:151787613 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.829G>A (p.Val277Ile) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001952843] Chr1:151814678 [GRCh38]
Chr1:151787154 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.189G>A (p.Ala63=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002188878] Chr1:151816773 [GRCh38]
Chr1:151789249 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.1286-11C>T single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002104538] Chr1:151811445 [GRCh38]
Chr1:151783921 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.933+13G>A single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002125240] Chr1:151814561 [GRCh38]
Chr1:151787037 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.1227C>G (p.Ala409=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002086508] Chr1:151813005 [GRCh38]
Chr1:151785481 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.1285+8T>A single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002190531] Chr1:151812939 [GRCh38]
Chr1:151785415 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.975C>T (p.Thr325=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002191223] Chr1:151813579 [GRCh38]
Chr1:151786055 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.231C>T (p.Arg77=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002168480] Chr1:151816731 [GRCh38]
Chr1:151789207 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.558T>C (p.Tyr186=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002129381] Chr1:151815166 [GRCh38]
Chr1:151787642 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.1175-5A>T single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002169472] Chr1:151813062 [GRCh38]
Chr1:151785538 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.1174+15G>A single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002132599] Chr1:151813224 [GRCh38]
Chr1:151785700 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.240A>G (p.Arg80=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002116933] Chr1:151816722 [GRCh38]
Chr1:151789198 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.40+15G>C single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002134717] Chr1:151831710 [GRCh38]
Chr1:151804186 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.843C>T (p.Tyr281=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002076926] Chr1:151814664 [GRCh38]
Chr1:151787140 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.40+12A>G single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002116871] Chr1:151831713 [GRCh38]
Chr1:151804189 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.1185G>A (p.Glu395=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002133660] Chr1:151813047 [GRCh38]
Chr1:151785523 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.156+15T>C single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002092752] Chr1:151817180 [GRCh38]
Chr1:151789656 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.70+12G>C single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002212185] Chr1:151829417 [GRCh38]
Chr1:151801893 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.70+19G>C single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002132084] Chr1:151829410 [GRCh38]
Chr1:151801886 [GRCh37]
Chr1:1q21.3
benign
NM_005060.4(RORC):c.282G>A (p.Leu94=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002148377] Chr1:151816680 [GRCh38]
Chr1:151789156 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.711G>A (p.Arg237=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002080311]|not provided [RCV002156716] Chr1:151815013 [GRCh38]
Chr1:151787489 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.1396-4C>G single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002137521] Chr1:151807637 [GRCh38]
Chr1:151780113 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.1002C>T (p.Phe334=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002100746] Chr1:151813552 [GRCh38]
Chr1:151786028 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.291C>T (p.Ser97=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002181885] Chr1:151816671 [GRCh38]
Chr1:151789147 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.1396-8A>G single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002099240] Chr1:151807641 [GRCh38]
Chr1:151780117 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.858G>A (p.Gln286=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002162516] Chr1:151814649 [GRCh38]
Chr1:151787125 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.1404C>G (p.Pro468=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002098181] Chr1:151807625 [GRCh38]
Chr1:151780101 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.1286-10C>G single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002102189] Chr1:151811444 [GRCh38]
Chr1:151783920 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.438C>T (p.Thr146=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002104010] Chr1:151815286 [GRCh38]
Chr1:151787762 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.108C>T (p.Asp36=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002179742] Chr1:151817243 [GRCh38]
Chr1:151789719 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.298+16_298+17del deletion Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002181235] Chr1:151816647..151816648 [GRCh38]
Chr1:151789123..151789124 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.298+13C>T single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002203798] Chr1:151816651 [GRCh38]
Chr1:151789127 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.40+18dup duplication Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002157730] Chr1:151831706..151831707 [GRCh38]
Chr1:151804182..151804183 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.70+16G>A single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002175534] Chr1:151829413 [GRCh38]
Chr1:151801889 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.1067-13C>T single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002102328] Chr1:151813359 [GRCh38]
Chr1:151785835 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.105G>A (p.Gly35=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002158654] Chr1:151817246 [GRCh38]
Chr1:151789722 [GRCh37]
Chr1:1q21.3
likely benign
NC_000001.10:g.(?_151801885)_(152287932_?)dup duplication Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003116304] Chr1:151801885..152287932 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.517C>T (p.Pro173Ser) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002991368] Chr1:151815207 [GRCh38]
Chr1:151787683 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.923A>T (p.Tyr308Phe) single nucleotide variant Inborn genetic diseases [RCV002839776] Chr1:151814584 [GRCh38]
Chr1:151787060 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.39G>T (p.Arg13=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002842334] Chr1:151831726 [GRCh38]
Chr1:151804202 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.916A>T (p.Thr306Ser) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002618679] Chr1:151814591 [GRCh38]
Chr1:151787067 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.1286-18T>A single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002881212] Chr1:151811452 [GRCh38]
Chr1:151783928 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.156+17dup duplication Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003098906] Chr1:151817177..151817178 [GRCh38]
Chr1:151789653..151789654 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.405G>A (p.Lys135=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002730373] Chr1:151815319 [GRCh38]
Chr1:151787795 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.1174+9del deletion Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002863459] Chr1:151813230 [GRCh38]
Chr1:151785706 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.881G>A (p.Arg294Gln) single nucleotide variant Inborn genetic diseases [RCV002753418] Chr1:151814626 [GRCh38]
Chr1:151787102 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.129C>T (p.Tyr43=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003076563] Chr1:151817222 [GRCh38]
Chr1:151789698 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.718G>C (p.Gly240Arg) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002819204] Chr1:151815006 [GRCh38]
Chr1:151787482 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.661G>A (p.Gly221Ser) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002903394] Chr1:151815063 [GRCh38]
Chr1:151787539 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.203C>T (p.Thr68Ile) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002800192] Chr1:151816759 [GRCh38]
Chr1:151789235 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.485C>T (p.Ser162Phe) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003039623] Chr1:151815239 [GRCh38]
Chr1:151787715 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.1193G>C (p.Ser398Thr) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002952725] Chr1:151813039 [GRCh38]
Chr1:151785515 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.811+18T>C single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002640278] Chr1:151814895 [GRCh38]
Chr1:151787371 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.1464C>T (p.His488=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002571758] Chr1:151807565 [GRCh38]
Chr1:151780041 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.1066+18G>A single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002800098] Chr1:151813470 [GRCh38]
Chr1:151785946 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.1531G>A (p.Glu511Lys) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003035310] Chr1:151807498 [GRCh38]
Chr1:151779974 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.73C>G (p.Gln25Glu) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003019918] Chr1:151817278 [GRCh38]
Chr1:151789754 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.1098C>T (p.Cys366=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002571142] Chr1:151813315 [GRCh38]
Chr1:151785791 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.429A>G (p.Gly143=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002871035] Chr1:151815295 [GRCh38]
Chr1:151787771 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.803C>G (p.Thr268Arg) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002824301] Chr1:151814921 [GRCh38]
Chr1:151787397 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.498G>A (p.Leu166=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002690881] Chr1:151815226 [GRCh38]
Chr1:151787702 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.313C>T (p.Arg105Cys) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002790415] Chr1:151815411 [GRCh38]
Chr1:151787887 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.354G>A (p.Val118=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002954304] Chr1:151815370 [GRCh38]
Chr1:151787846 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.965A>G (p.His322Arg) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002919208] Chr1:151813589 [GRCh38]
Chr1:151786065 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.394C>A (p.Pro132Thr) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003081812] Chr1:151815330 [GRCh38]
Chr1:151787806 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.299-14T>C single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003082885] Chr1:151815439 [GRCh38]
Chr1:151787915 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.934-6C>T single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002710263] Chr1:151813626 [GRCh38]
Chr1:151786102 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.1174+15G>T single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002701167] Chr1:151813224 [GRCh38]
Chr1:151785700 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.811+12G>A single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002711625] Chr1:151814901 [GRCh38]
Chr1:151787377 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.675C>A (p.Thr225=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002575191] Chr1:151815049 [GRCh38]
Chr1:151787525 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.718G>A (p.Gly240Arg) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003084873] Chr1:151815006 [GRCh38]
Chr1:151787482 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.1032C>T (p.Leu344=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003058605] Chr1:151813522 [GRCh38]
Chr1:151785998 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.1045C>A (p.Gln349Lys) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002649809] Chr1:151813509 [GRCh38]
Chr1:151785985 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.1227C>T (p.Ala409=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002631868] Chr1:151813005 [GRCh38]
Chr1:151785481 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.1120C>T (p.Arg374Cys) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003092104] Chr1:151813293 [GRCh38]
Chr1:151785769 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.662G>A (p.Gly221Asp) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003065168] Chr1:151815062 [GRCh38]
Chr1:151787538 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.30A>T (p.Arg10=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002898638] Chr1:151831735 [GRCh38]
Chr1:151804211 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.1396-20C>A single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002811438] Chr1:151807653 [GRCh38]
Chr1:151780129 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.1225G>A (p.Ala409Thr) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003027527] Chr1:151813007 [GRCh38]
Chr1:151785483 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.814C>T (p.His272Tyr) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003048523] Chr1:151814693 [GRCh38]
Chr1:151787169 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.787C>A (p.Pro263Thr) single nucleotide variant Inborn genetic diseases [RCV002960202] Chr1:151814937 [GRCh38]
Chr1:151787413 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.299-16C>T single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002792134] Chr1:151815441 [GRCh38]
Chr1:151787917 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.494A>G (p.Asp165Gly) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002988801] Chr1:151815230 [GRCh38]
Chr1:151787706 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.40+7G>A single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002720566] Chr1:151831718 [GRCh38]
Chr1:151804194 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.855C>T (p.Cys285=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003065656]|RORC-related disorder [RCV003926676] Chr1:151814652 [GRCh38]
Chr1:151787128 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.903C>G (p.Ser301=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002635385] Chr1:151814604 [GRCh38]
Chr1:151787080 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.596C>T (p.Ser199Leu) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002943102] Chr1:151815128 [GRCh38]
Chr1:151787604 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.370C>G (p.Gln124Glu) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003072450] Chr1:151815354 [GRCh38]
Chr1:151787830 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.769C>T (p.Arg257Cys) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003093685] Chr1:151814955 [GRCh38]
Chr1:151787431 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.1489G>A (p.Ala497Thr) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002634720] Chr1:151807540 [GRCh38]
Chr1:151780016 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.887G>A (p.Arg296His) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV002634792] Chr1:151814620 [GRCh38]
Chr1:151787096 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.156+20A>C single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003092468] Chr1:151817175 [GRCh38]
Chr1:151789651 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.653A>T (p.Tyr218Phe) single nucleotide variant Inborn genetic diseases [RCV003175775] Chr1:151815071 [GRCh38]
Chr1:151787547 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.776C>T (p.Thr259Ile) single nucleotide variant Inborn genetic diseases [RCV003211480] Chr1:151814948 [GRCh38]
Chr1:151787424 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.40+752C>A single nucleotide variant not specified [RCV003397054] Chr1:151830973 [GRCh38]
Chr1:151803449 [GRCh37]
Chr1:1q21.3
benign
GRCh37/hg19 1q12-23.1(chr1:142535935-157648813)x3 copy number gain Chromosome 1q21.1 duplication syndrome [RCV003329522] Chr1:142535935..157648813 [GRCh37]
Chr1:1q12-23.1
pathogenic
NM_005060.4(RORC):c.1165C>T (p.Arg389Ter) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003337837] Chr1:151813248 [GRCh38]
Chr1:151785724 [GRCh37]
Chr1:1q21.3
likely pathogenic
NM_005060.4(RORC):c.156+73_156+74insCACACACT microsatellite not specified [RCV003489163] Chr1:151817121..151817122 [GRCh38]
Chr1:151789597..151789598 [GRCh37]
Chr1:1q21.3
benign
NM_005060.4(RORC):c.1396-68G>A single nucleotide variant not specified [RCV003397031] Chr1:151807701 [GRCh38]
Chr1:151780177 [GRCh37]
Chr1:1q21.3
benign
NM_005060.4(RORC):c.156+62delinsACACACACA indel not specified [RCV003489117] Chr1:151817133 [GRCh38]
Chr1:151789609 [GRCh37]
Chr1:1q21.3
benign
NM_005060.4(RORC):c.40+437C>G single nucleotide variant not specified [RCV003391190] Chr1:151831288 [GRCh38]
Chr1:151803764 [GRCh37]
Chr1:1q21.3
benign
NM_005060.4(RORC):c.1395+113T>G single nucleotide variant not specified [RCV003397069] Chr1:151811212 [GRCh38]
Chr1:151783688 [GRCh37]
Chr1:1q21.3
benign
NM_005060.4(RORC):c.40+537G>A single nucleotide variant not specified [RCV003397058] Chr1:151831188 [GRCh38]
Chr1:151803664 [GRCh37]
Chr1:1q21.3
benign
NM_005060.4(RORC):c.70+3610C>T single nucleotide variant not specified [RCV003391237] Chr1:151825819 [GRCh38]
Chr1:151798295 [GRCh37]
Chr1:1q21.3
benign
NM_005060.4(RORC):c.292C>T (p.Arg98Ter) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003592455] Chr1:151816670 [GRCh38]
Chr1:151789146 [GRCh37]
Chr1:1q21.3
pathogenic
NM_005060.4(RORC):c.165C>T (p.Phe55=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003592477] Chr1:151816797 [GRCh38]
Chr1:151789273 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.606T>C (p.Leu202=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003591289] Chr1:151815118 [GRCh38]
Chr1:151787594 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.298+14G>A single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003592506] Chr1:151816650 [GRCh38]
Chr1:151789126 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.156+61_156+62insCACACACA microsatellite not specified [RCV003488833] Chr1:151817133..151817134 [GRCh38]
Chr1:151789609..151789610 [GRCh37]
Chr1:1q21.3
benign
NM_005060.4(RORC):c.156+62G>A single nucleotide variant not specified [RCV003488985] Chr1:151817133 [GRCh38]
Chr1:151789609 [GRCh37]
Chr1:1q21.3
benign
NM_005060.4(RORC):c.156+79_156+80insCACACACG microsatellite not specified [RCV003489194] Chr1:151817115..151817116 [GRCh38]
Chr1:151789591..151789592 [GRCh37]
Chr1:1q21.3
benign
NM_005060.4(RORC):c.156+63CA[14] microsatellite not specified [RCV003489193] Chr1:151817112..151817113 [GRCh38]
Chr1:151789588..151789589 [GRCh37]
Chr1:1q21.3
benign
NM_005060.4(RORC):c.1209C>T (p.Phe403=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003591439] Chr1:151813023 [GRCh38]
Chr1:151785499 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.156+71_156+72insCACACACT microsatellite not specified [RCV003489244] Chr1:151817123..151817124 [GRCh38]
Chr1:151789599..151789600 [GRCh37]
Chr1:1q21.3
benign
NM_005060.4(RORC):c.156+81_156+82insCACACACT microsatellite not specified [RCV003489243] Chr1:151817113..151817114 [GRCh38]
Chr1:151789589..151789590 [GRCh37]
Chr1:1q21.3
benign
NM_005060.4(RORC):c.156+60G>A single nucleotide variant not specified [RCV003488991] Chr1:151817135 [GRCh38]
Chr1:151789611 [GRCh37]
Chr1:1q21.3
benign
NM_005060.4(RORC):c.1151G>C (p.Gly384Ala) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003592950] Chr1:151813262 [GRCh38]
Chr1:151785738 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.132G>T (p.Gly44=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003755142] Chr1:151817219 [GRCh38]
Chr1:151789695 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.157-20C>G single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003756329] Chr1:151816825 [GRCh38]
Chr1:151789301 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.865C>T (p.Leu289=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003755502] Chr1:151814642 [GRCh38]
Chr1:151787118 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.663C>T (p.Gly221=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003755623] Chr1:151815061 [GRCh38]
Chr1:151787537 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.442A>G (p.Thr148Ala) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003756142] Chr1:151815282 [GRCh38]
Chr1:151787758 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.921C>T (p.Gly307=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003755325] Chr1:151814586 [GRCh38]
Chr1:151787062 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.918T>C (p.Thr306=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003755262] Chr1:151814589 [GRCh38]
Chr1:151787065 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.657C>T (p.Ser219=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003755562] Chr1:151815067 [GRCh38]
Chr1:151787543 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.504G>A (p.Glu168=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003755354] Chr1:151815220 [GRCh38]
Chr1:151787696 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.1479G>A (p.Val493=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003755832] Chr1:151807550 [GRCh38]
Chr1:151780026 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.933+10G>A single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003755882] Chr1:151814564 [GRCh38]
Chr1:151787040 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.682C>T (p.Arg228Ter) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003755902] Chr1:151815042 [GRCh38]
Chr1:151787518 [GRCh37]
Chr1:1q21.3
pathogenic
NM_005060.4(RORC):c.1017A>G (p.Ser339=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003756333] Chr1:151813537 [GRCh38]
Chr1:151786013 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.687T>C (p.Cys229=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003756560] Chr1:151815037 [GRCh38]
Chr1:151787513 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.183T>C (p.Cys61=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003756476] Chr1:151816779 [GRCh38]
Chr1:151789255 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.1242G>A (p.Glu414=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003593128] Chr1:151812990 [GRCh38]
Chr1:151785466 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.489G>T (p.Ser163=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003854918] Chr1:151815235 [GRCh38]
Chr1:151787711 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.1323G>A (p.Gln441=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003844829] Chr1:151811397 [GRCh38]
Chr1:151783873 [GRCh37]
Chr1:1q21.3
likely benign
GRCh37/hg19 1q21.1-23.1(chr1:144368497-158992086)x3 copy number gain not specified [RCV003986717] Chr1:144368497..158992086 [GRCh37]
Chr1:1q21.1-23.1
pathogenic
NM_005060.4(RORC):c.180C>T (p.Arg60=) single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003871463] Chr1:151816782 [GRCh38]
Chr1:151789258 [GRCh37]
Chr1:1q21.3
likely benign
NM_005060.4(RORC):c.70+11G>C single nucleotide variant Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003868355] Chr1:151829418 [GRCh38]
Chr1:151801894 [GRCh37]
Chr1:1q21.3
likely benign
GRCh37/hg19 1q21.1-23.1(chr1:146577511-157155587)x3 copy number gain not specified [RCV003987261] Chr1:146577511..157155587 [GRCh37]
Chr1:1q21.1-23.1
pathogenic
NM_005060.4(RORC):c.677C>A (p.Pro226His) single nucleotide variant Inborn genetic diseases [RCV004665625] Chr1:151815047 [GRCh38]
Chr1:151787523 [GRCh37]
Chr1:1q21.3
uncertain significance
NM_005060.4(RORC):c.821_933+84del deletion Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV003336044] Chr1:151814490..151814686 [GRCh38]
Chr1:151786966..151787162 [GRCh37]
Chr1:1q21.3
uncertain significance
miRNA Target Status

Confirmed Target Of
miRNA GeneMature miRNAMethod NameResult TypeData TypeSupport TypePMID
MIR30Bhsa-miR-30b-3pMirtarbaseexternal_infoLuciferase reporter assayFunctional MTI23359619

Predicted Target Of
Summary Value
Count of predictions:1759
Count of miRNA genes:651
Interacting mature miRNAs:756
Transcripts:ENST00000318247, ENST00000356728, ENST00000392697, ENST00000480719
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
407278407GWAS927383_Hasthma QTL GWAS927383 (human)1e-12asthma1151813805151813806Human
407310788GWAS959764_Hinsomnia QTL GWAS959764 (human)7e-09insomnia1151808252151808253Human
406949897GWAS598873_Hdrug use measurement, depressive symptom measurement, SSRI use measurement QTL GWAS598873 (human)0.0000003drug use measurement, depressive symptom measurement, SSRI use measurement1151813896151813897Human
407210888GWAS859864_HEczematoid dermatitis QTL GWAS859864 (human)3e-22Eczematoid dermatitis1151829204151829205Human
407379077GWAS1028053_Hserum gamma-glutamyl transferase measurement QTL GWAS1028053 (human)9e-43serum gamma-glutamyl transferase measurementserum gamma-glutamyltransferase activity level (CMO:0002241)1151831737151831738Human
407004172GWAS653148_Hinterleukin 4 measurement QTL GWAS653148 (human)0.000004interleukin 4 measurementblood interleukin-4 level (CMO:0003065)1151830571151830572Human
1357381BW57_HBody weight QTL 57 (human)10.0001Body weightfat free mass after exercise training1140630236166630236Human
407279959GWAS928935_Hulcerative colitis QTL GWAS928935 (human)1e-09ulcerative colitis1151812071151812072Human
406925328GWAS574304_Hcis-4-decenoate (10:1n6) measurement QTL GWAS574304 (human)2e-12cis-4-decenoate (10:1n6) measurement1151825217151825218Human
406962834GWAS611810_HCOVID-19 QTL GWAS611810 (human)2e-19COVID-191151822318151822319Human
407366673GWAS1015649_Hserum gamma-glutamyl transferase measurement QTL GWAS1015649 (human)5e-37serum gamma-glutamyl transferase measurementserum gamma-glutamyltransferase activity level (CMO:0002241)1151831737151831738Human
406999578GWAS648554_HCrohn's disease QTL GWAS648554 (human)0.0000006Crohn's disease1151829204151829205Human
407254367GWAS903343_Hinflammatory bowel disease QTL GWAS903343 (human)9e-10inflammatory bowel disease1151812071151812072Human
407006424GWAS655400_Hulcerative colitis QTL GWAS655400 (human)2e-11respiratory system disease1151829204151829205Human
406954587GWAS603563_Hankylosing spondylitis, psoriasis, ulcerative colitis, Crohn's disease, sclerosing cholangitis QTL GWAS603563 (human)2e-16childhood onset asthma1151829204151829205Human
407256600GWAS905576_Hinflammatory bowel disease QTL GWAS905576 (human)3e-17inflammatory bowel disease1151820698151820699Human
407334503GWAS983479_Heducational attainment QTL GWAS983479 (human)1e-09educational attainment1151829204151829205Human
407378794GWAS1027770_HC-reactive protein measurement QTL GWAS1027770 (human)2e-09C-reactive protein measurementblood C-reactive protein level (CMO:0003160)1151831737151831738Human
407254368GWAS903344_Hinflammatory bowel disease QTL GWAS903344 (human)6e-10inflammatory bowel disease1151820698151820699Human
407060132GWAS709108_Hinflammatory bowel disease QTL GWAS709108 (human)4e-16inflammatory bowel disease1151829204151829205Human
407148451GWAS797427_Hchildhood onset asthma QTL GWAS797427 (human)3e-17childhood onset asthma1151829917151829918Human
407148461GWAS797437_Hchildhood onset asthma QTL GWAS797437 (human)2e-13childhood onset asthma1151829204151829205Human
407061736GWAS710712_Hatopic asthma QTL GWAS710712 (human)2e-08atopic asthma1151829917151829918Human
407057391GWAS706367_Hatopic asthma QTL GWAS706367 (human)1e-12atopic asthma1151829204151829205Human
406987759GWAS636735_Hinflammatory bowel disease QTL GWAS636735 (human)8e-09inflammatory bowel disease1151812071151812072Human
407148459GWAS797435_Hchildhood onset asthma QTL GWAS797435 (human)6e-18childhood onset asthma1151813805151813806Human
407030322GWAS679298_Hulcerative colitis QTL GWAS679298 (human)1e-18ulcerative colitis1151829204151829205Human
407108851GWAS757827_HEczematoid dermatitis, allergic rhinitis QTL GWAS757827 (human)5e-21Eczematoid dermatitis, allergic rhinitis1151829204151829205Human
407357110GWAS1006086_Hserum gamma-glutamyl transferase measurement QTL GWAS1006086 (human)2e-25serum gamma-glutamyl transferase measurementserum gamma-glutamyltransferase activity level (CMO:0002241)1151831737151831738Human
407057392GWAS706368_Hatopic asthma QTL GWAS706368 (human)2e-11atopic asthma1151813805151813806Human
407376315GWAS1025291_Herythrocyte count QTL GWAS1025291 (human)2e-10erythrocyte countred blood cell count (CMO:0000025)1151831737151831738Human
407376316GWAS1025292_Hurate measurement QTL GWAS1025292 (human)1e-10urate measurementblood uric acid level (CMO:0000501)1151831737151831738Human
407299955GWAS948931_Hasthma QTL GWAS948931 (human)3e-14asthma1151829204151829205Human
407271038GWAS920014_Hasthma QTL GWAS920014 (human)3e-08asthma1151829204151829205Human
407032059GWAS681035_Hinflammatory bowel disease QTL GWAS681035 (human)1e-17inflammatory bowel disease1151829204151829205Human
406969080GWAS618056_Hinflammatory bowel disease QTL GWAS618056 (human)7e-14inflammatory bowel disease1151829204151829205Human
407389365GWAS1038341_Hserum gamma-glutamyl transferase measurement QTL GWAS1038341 (human)1e-37serum gamma-glutamyl transferase measurementserum gamma-glutamyltransferase activity level (CMO:0002241)1151831737151831738Human
407228923GWAS877899_Hallergic disease QTL GWAS877899 (human)2e-12allergic disease1151824266151824267Human
407031485GWAS680461_HCrohn's disease QTL GWAS680461 (human)0.0000001Crohn's disease1151829204151829205Human

Markers in Region
RH122679  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371151,789,050 - 151,789,397UniSTSGRCh37
Build 361150,055,674 - 150,056,021RGDNCBI36
Celera1124,903,736 - 124,904,083RGD
Cytogenetic Map1q21UniSTS
HuRef1123,166,022 - 123,166,369UniSTS
RH16275  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371151,778,715 - 151,778,853UniSTSGRCh37
Build 361150,045,339 - 150,045,477RGDNCBI36
Celera1124,893,398 - 124,893,536RGD
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map1q21UniSTS
HuRef1123,155,683 - 123,155,821UniSTS
GeneMap99-GB4 RH Map1552.04UniSTS
NCBI RH Map11354.1UniSTS
SHGC-34816  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371151,778,594 - 151,778,743UniSTSGRCh37
Build 361150,045,218 - 150,045,367RGDNCBI36
Celera1124,893,277 - 124,893,426RGD
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map1q21UniSTS
HuRef1123,155,562 - 123,155,711UniSTS
GeneMap99-GB4 RH Map1543.09UniSTS
Whitehead-RH Map1644.7UniSTS
NCBI RH Map11022.2UniSTS
GeneMap99-G3 RH Map11705.0UniSTS
RORC_3000  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371151,779,554 - 151,780,157UniSTSGRCh37
Build 361150,046,178 - 150,046,781RGDNCBI36
Celera1124,894,237 - 124,894,840RGD
HuRef1123,156,522 - 123,157,125UniSTS


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
pharyngeal arch
renal system
reproductive system
respiratory system
sensory system
1204 2390 2757 2185 4833 1709 2271 1 615 1402 457 2216 6653 5858 21 3650 1 816 1691 1543 165

Sequence

Nucleotide Sequences
RefSeq Transcripts NG_029118 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001001523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_005060 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006711484 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047427201 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054338086 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054338087 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB307696 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF075096 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK097994 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK128522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK223137 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK298460 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK315662 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL589765 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL834219 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AW004872 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC031554 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC110571 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BI520481 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB161467 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471121 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR457436 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DB148892 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ692834 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT583857 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KY670636 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U16997 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENST00000318247   ⟹   ENSP00000327025
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1151,806,071 - 151,831,802 (-)Ensembl
Ensembl Acc Id: ENST00000356728   ⟹   ENSP00000349164
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1151,806,071 - 151,826,096 (-)Ensembl
Ensembl Acc Id: ENST00000480719
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1151,806,958 - 151,814,789 (-)Ensembl
Ensembl Acc Id: ENST00000638901   ⟹   ENSP00000492395
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1151,806,894 - 151,831,750 (-)Ensembl
Ensembl Acc Id: ENST00000651025
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1151,816,439 - 151,826,078 (-)Ensembl
Ensembl Acc Id: ENST00000651814   ⟹   ENSP00000498691
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1151,806,100 - 151,831,798 (-)Ensembl
Ensembl Acc Id: ENST00000651893   ⟹   ENSP00000498925
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1151,806,120 - 151,815,133 (-)Ensembl
Ensembl Acc Id: ENST00000652040   ⟹   ENSP00000498548
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1151,806,120 - 151,831,845 (-)Ensembl
Ensembl Acc Id: ENST00000697811   ⟹   ENSP00000513447
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1151,806,100 - 151,831,806 (-)Ensembl
Ensembl Acc Id: ENST00000697812
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1151,811,509 - 151,814,644 (-)Ensembl
Ensembl Acc Id: ENST00000697813
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1151,812,403 - 151,831,845 (-)Ensembl
RefSeq Acc Id: NM_001001523   ⟹   NP_001001523
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381151,806,071 - 151,826,096 (-)NCBI
GRCh371151,778,547 - 151,804,348 (-)ENTREZGENE
Build 361150,045,171 - 150,065,177 (-)NCBI Archive
HuRef1123,155,515 - 123,181,337 (-)ENTREZGENE
CHM1_11153,173,871 - 153,193,877 (-)NCBI
T2T-CHM13v2.01150,929,559 - 150,949,592 (-)NCBI
Sequence:
RefSeq Acc Id: NM_005060   ⟹   NP_005051
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381151,806,071 - 151,831,802 (-)NCBI
GRCh371151,778,547 - 151,804,348 (-)ENTREZGENE
Build 361150,045,171 - 150,070,972 (-)NCBI Archive
HuRef1123,155,515 - 123,181,337 (-)ENTREZGENE
CHM1_11153,173,871 - 153,199,672 (-)NCBI
T2T-CHM13v2.01150,929,559 - 150,955,307 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006711484   ⟹   XP_006711547
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381151,806,071 - 151,831,802 (-)NCBI
Sequence:
RefSeq Acc Id: XM_047427201   ⟹   XP_047283157
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381151,813,488 - 151,826,096 (-)NCBI
RefSeq Acc Id: XM_054338086   ⟹   XP_054194061
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01150,936,976 - 150,949,592 (-)NCBI
RefSeq Acc Id: XM_054338087   ⟹   XP_054194062
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01150,929,559 - 150,955,307 (-)NCBI
RefSeq Acc Id: NP_005051   ⟸   NM_005060
- Peptide Label: isoform a
- UniProtKB: Q8N5V7 (UniProtKB/Swiss-Prot),   Q5SZR9 (UniProtKB/Swiss-Prot),   Q8NCY8 (UniProtKB/Swiss-Prot),   P51449 (UniProtKB/Swiss-Prot),   Q6I9R9 (UniProtKB/TrEMBL),   B2RDT1 (UniProtKB/TrEMBL),   Q53FZ4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001001523   ⟸   NM_001001523
- Peptide Label: isoform b
- UniProtKB: F1D8P6 (UniProtKB/TrEMBL),   B3KUU9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006711547   ⟸   XM_006711484
- Peptide Label: isoform X2
- Sequence:
Ensembl Acc Id: ENSP00000492395   ⟸   ENST00000638901
Ensembl Acc Id: ENSP00000498691   ⟸   ENST00000651814
Ensembl Acc Id: ENSP00000498925   ⟸   ENST00000651893
Ensembl Acc Id: ENSP00000498548   ⟸   ENST00000652040
Ensembl Acc Id: ENSP00000349164   ⟸   ENST00000356728
Ensembl Acc Id: ENSP00000327025   ⟸   ENST00000318247
RefSeq Acc Id: XP_047283157   ⟸   XM_047427201
- Peptide Label: isoform X1
Ensembl Acc Id: ENSP00000513447   ⟸   ENST00000697811
RefSeq Acc Id: XP_054194062   ⟸   XM_054338087
- Peptide Label: isoform X2
- UniProtKB: B4DPR1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054194061   ⟸   XM_054338086
- Peptide Label: isoform X1
Protein Domains
NR LBD   Nuclear receptor

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P51449-F1-model_v2 AlphaFold P51449 1-518 view protein structure

Promoters
RGD ID:6786449
Promoter ID:HG_KWN:5067
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:HeLa_S3
Transcripts:OTTHUMT00000036628
Position:
Human AssemblyChrPosition (strand)Source
Build 361150,052,391 - 150,053,642 (-)MPROMDB
RGD ID:6786448
Promoter ID:HG_KWN:5068
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Jurkat
Transcripts:OTTHUMT00000036627
Position:
Human AssemblyChrPosition (strand)Source
Build 361150,064,971 - 150,065,471 (-)MPROMDB
RGD ID:6786447
Promoter ID:HG_KWN:5069
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:HeLa_S3
Transcripts:NM_005060
Position:
Human AssemblyChrPosition (strand)Source
Build 361150,070,536 - 150,071,036 (-)MPROMDB
RGD ID:6857098
Promoter ID:EPDNEW_H1714
Type:initiation region
Name:RORC_2
Description:RAR related orphan receptor C
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H1715  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381151,826,096 - 151,826,156EPDNEW
RGD ID:6857100
Promoter ID:EPDNEW_H1715
Type:initiation region
Name:RORC_1
Description:RAR related orphan receptor C
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H1714  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381151,831,798 - 151,831,858EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:10260 AgrOrtholog
COSMIC RORC COSMIC
Ensembl Genes ENSG00000143365 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000318247 ENTREZGENE
  ENST00000318247.7 UniProtKB/Swiss-Prot
  ENST00000356728 ENTREZGENE
  ENST00000356728.11 UniProtKB/Swiss-Prot
  ENST00000638901.1 UniProtKB/TrEMBL
  ENST00000651814 ENTREZGENE
  ENST00000651814.1 UniProtKB/TrEMBL
  ENST00000651893.1 UniProtKB/TrEMBL
  ENST00000652040.2 UniProtKB/TrEMBL
  ENST00000697811.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.565.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.30.50.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000143365 GTEx
HGNC ID HGNC:10260 ENTREZGENE
Human Proteome Map RORC Human Proteome Map
InterPro NHR-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NR_DBD_ROR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nucl_hrmn_rcpt_lig-bd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nuclear_hrmn_rcpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ROR_rcpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_hrmn_rcpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_NHR/GATA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:6097 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 6097 ENTREZGENE
OMIM 602943 OMIM
PANTHER NUCLEAR HORMONE RECEPTOR HR3-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NUCLEAR RECEPTOR ROR-GAMMA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Hormone_recep UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  zf-C4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA34632 PharmGKB
PRINTS RORNUCRECPTR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  STRDHORMONER UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  STROIDFINGER UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE NR_LBD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NUCLEAR_REC_DBD_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NUCLEAR_REC_DBD_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART HOLI UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZnF_C4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP Glucocorticoid receptor-like (DNA-binding domain) UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF48508 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A1W2PRM4_HUMAN UniProtKB/TrEMBL
  A0A2K9REZ7_HUMAN UniProtKB/TrEMBL
  A0A494C0H2_HUMAN UniProtKB/TrEMBL
  A0A494C0S6_HUMAN UniProtKB/TrEMBL
  A0A494C174_HUMAN UniProtKB/TrEMBL
  A0A8V8TL94_HUMAN UniProtKB/TrEMBL
  B2RDT1 ENTREZGENE, UniProtKB/TrEMBL
  B3KUU9 ENTREZGENE, UniProtKB/TrEMBL
  B4DPR1 ENTREZGENE, UniProtKB/TrEMBL
  F1D8P6 ENTREZGENE, UniProtKB/TrEMBL
  P51449 ENTREZGENE
  Q53FZ4 ENTREZGENE, UniProtKB/TrEMBL
  Q5SZR9 ENTREZGENE
  Q6I9R9 ENTREZGENE, UniProtKB/TrEMBL
  Q8N5V7 ENTREZGENE
  Q8NCY8 ENTREZGENE
  RORG_HUMAN UniProtKB/Swiss-Prot
UniProt Secondary Q5SZR9 UniProtKB/Swiss-Prot
  Q8N5V7 UniProtKB/Swiss-Prot
  Q8NCY8 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-02-02 RORC  RAR related orphan receptor C  RORC  RAR-related orphan receptor C  Symbol and/or name change 5135510 APPROVED