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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:abnormal NK T cell physiology
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Accession:MP:0008042 term browser browse the term
Definition:any functional anomaly of the distinct lineage of T cells expressing natural killer cell markers and having T cell receptors characterized by the usage of a restricted repertoire of variable region gene segments
Synonyms:exact_synonym: abnormal NK T lymphocyte physiology;   abnormal NKT cell physiology;   abnormal natural T cell physiology;   abnormal natural killer T cell physiology;   abnormal natural killer T lymphocyte physiology


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abnormal NK T cell physiology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G 1700016L21Rik RIKEN cDNA 1700016L21 gene IAGP MGI PMID:15644449 NCBI chr 1:80,423,649...80,453,377
Ensembl chr 1:80,405,912...80,457,752 		JBrowse link
G Apc APC, WNT signaling pathway regulator IAGP MGI PMID:22251704 NCBI chr18:34,353,350...34,455,243
Ensembl chr18:34,353,977...34,455,605 		JBrowse link
G Ccr5 C-C motif chemokine receptor 5 IAGP MGI PMID:15944310 NCBI chr 9:123,921,557...123,934,153
Ensembl chr 9:123,921,580...123,947,736 		JBrowse link
G Cd1d1 CD1d1 antigen IAGP MGI PMID:19587020 NCBI chr 3:86,903,141...86,919,665
Ensembl chr 3:86,903,141...86,906,748 		JBrowse link
G Clnk cytokine-dependent hematopoietic cell linker IAGP MGI PMID:16439675 NCBI chr 5:38,858,951...39,034,201
Ensembl chr 5:38,863,805...39,034,155 		JBrowse link
G Cxcr2 C-X-C motif chemokine receptor 2 IAGP MGI PMID:11123307 NCBI chr 1:74,193,153...74,200,405
Ensembl chr 1:74,193,150...74,200,405 		JBrowse link
G Fcer1g Fc receptor, IgE, high affinity I, gamma polypeptide IAGP MGI PMID:9396764 NCBI chr 1:171,057,141...171,061,918
Ensembl chr 1:171,057,141...171,061,934 		JBrowse link
G Gimap5 GTPase, IMAP family member 5 IAGP MGI PMID:20190135 NCBI chr 6:48,723,131...48,731,134
Ensembl chr 6:48,723,131...48,731,144 		JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:23430111 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294 		JBrowse link
G Hcst hematopoietic cell signal transducer IAGP MGI PMID:17100879 PMID:19332875 NCBI chr 7:30,117,137...30,119,279
Ensembl chr 7:30,117,137...30,119,279 		JBrowse link
G Ikbkg inhibitor of kappaB kinase gamma IAGP MGI PMID:19635861 NCBI chr  X:73,436,883...73,498,013
Ensembl chr  X:73,436,896...73,497,460 		JBrowse link
G Il7 interleukin 7 IAGP MGI PMID:23018454 NCBI chr 3:7,637,088...7,678,820
Ensembl chr 3:7,635,054...7,678,820 		JBrowse link
G Lect2 leukocyte cell-derived chemotaxin 2 IAGP MGI PMID:22251704 NCBI chr13:56,676,772...56,696,373
Ensembl chr13:56,690,277...56,696,315 		JBrowse link
G Myd88 myeloid differentiation primary response gene 88 IAGP MGI PMID:14993594 NCBI chr 9:119,165,000...119,169,084
Ensembl chr 9:119,165,000...119,170,477 		JBrowse link
G Ndor1 NADPH dependent diflavin oxidoreductase 1 IAGP MGI PMID:23430111 NCBI chr 2:25,134,825...25,145,458
Ensembl chr 2:25,134,833...25,146,034
Ensembl chr 2:25,134,833...25,146,034
Ensembl chr 2:25,134,833...25,146,034 		JBrowse link
G Sh2d1a SH2 domain containing 1A IAGP MGI PMID:22613797 PMID:23430111 NCBI chr  X:41,591,442...41,610,974
Ensembl chr  X:41,591,330...41,618,207 		JBrowse link
G Speer6-ps1 spermatogenesis associated glutamate (E)-rich protein 6, pseudogene 1 IAGP MGI PMID:23018454 NCBI chr13:3,199,475...3,239,678
Ensembl chr13:3,236,206...3,239,317
Ensembl chr13:3,236,206...3,239,317 		JBrowse link
G Tcra T cell receptor alpha chain IAGP MGI PMID:15975513 NCBI chr14:52,665,424...54,461,655 JBrowse link
G Ticam1 TIR domain containing adaptor molecule 1 IAGP MGI PMID:21760953 NCBI chr17:56,576,462...56,583,767
Ensembl chr17:56,576,319...56,583,786 		JBrowse link
G Tlr3 toll-like receptor 3 IAGP MGI PMID:14993594 NCBI chr 8:45,848,702...45,864,112
Ensembl chr 8:45,848,702...45,864,117 		JBrowse link
G Tlr9 toll-like receptor 9 IAGP MGI PMID:14993594 NCBI chr 9:106,099,797...106,104,075
Ensembl chr 9:106,099,797...106,104,082 		JBrowse link
G Tyrobp TYRO protein tyrosine kinase binding protein IAGP MGI PMID:19332875 NCBI chr 7:30,113,207...30,117,007
Ensembl chr 7:30,113,185...30,117,010 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 16738
    immune system phenotype 5615
      abnormal immune system physiology 3424
        abnormal immune cell physiology 1788
          abnormal leukocyte physiology 1753
            abnormal lymphocyte physiology 1291
              abnormal T cell physiology 765
                abnormal NK T cell physiology 25
paths to the root