Speer6-ps1 (spermatogenesis associated glutamate (E)-rich protein 6, pseudogene 1) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Speer6-ps1 (spermatogenesis associated glutamate (E)-rich protein 6, pseudogene 1) Mus musculus
Analyze
Symbol: Speer6-ps1
Name: spermatogenesis associated glutamate (E)-rich protein 6, pseudogene 1
RGD ID: 1620748
MGI Page MGI
Description: ASSOCIATED WITH abdomen swellings; abnormal acetaminophen metabolism; abnormal aerobic respiration; INTERACTS WITH 1,2-dichloroethane; trimellitic anhydride
Type: pseudo
RefSeq Status: PROVISIONAL
Also known as: 1700039A02Rik; Alb-cre; Alb; AlbCre; albumin-cre; cr; SPEE; SPEER-6; Tg(Alb-cre)21Mgn
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39133,199,475 - 3,239,678 (+)NCBIGRCm39mm39
GRCm39 Ensembl133,199,475 - 3,239,678 (+)Ensembl
GRCm38133,149,475 - 3,189,678 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl133,149,475 - 3,189,678 (+)EnsemblGRCm38mm10GRCm38
MGSCv37133,148,721 - 3,188,924 (+)NCBIGRCm37mm9NCBIm37
MGSCv36133,148,721 - 3,188,924 (+)NCBImm8
Celera133,135,860 - 3,175,371 (+)NCBICelera
Cytogenetic Map13A1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abdomen swellings  (IAGP)
abnormal acetaminophen metabolism  (IAGP)
abnormal aerobic respiration  (IAGP)
abnormal apolipoprotein level  (IAGP)
abnormal autophagy  (IAGP)
abnormal B cell differentiation  (IAGP)
abnormal bile canaliculus morphology  (IAGP)
abnormal bile composition  (IAGP)
abnormal bile duct development  (IAGP)
abnormal bile duct morphology  (IAGP)
abnormal bile duct physiology  (IAGP)
abnormal bile salt homeostasis  (IAGP)
abnormal bile salt level  (IAGP)
abnormal bile secretion  (IAGP)
abnormal blood coagulation  (IAGP)
abnormal blood homeostasis  (IAGP)
abnormal blood vessel morphology  (IAGP)
abnormal carbohydrate metabolism  (IAGP)
abnormal cell differentiation  (IAGP)
abnormal cell migration  (IAGP)
abnormal cell morphology  (IAGP)
abnormal cell physiology  (IAGP)
abnormal cellular cholesterol metabolism  (IAGP)
abnormal cellular replicative senescence  (IAGP)
abnormal cellular respiration  (IAGP)
abnormal cholangiocyte morphology  (IAGP)
abnormal cholesterol homeostasis  (IAGP)
abnormal circulating alanine transaminase level  (IAGP)
abnormal circulating amino acid level  (IAGP)
abnormal circulating apolipoprotein level  (IAGP)
abnormal circulating cholesterol level  (IAGP)
abnormal circulating enzyme level  (IAGP)
abnormal circulating ketone body level  (IAGP)
abnormal circulating phospholipid level  (IAGP)
abnormal circulating serum albumin level  (IAGP)
abnormal eating behavior  (IAGP)
abnormal endoplasmic reticulum morphology  (IAGP)
abnormal energy homeostasis  (IAGP)
abnormal enzyme/coenzyme activity  (IAGP)
abnormal fat pad morphology  (IAGP)
abnormal fatty acid beta-oxidation  (IAGP)
abnormal fatty acid oxidation  (IAGP)
abnormal fatty acids level  (IAGP)
abnormal fear-related response  (IAGP)
abnormal feces composition  (IAGP)
abnormal gait  (IAGP)
abnormal gluconeogenesis  (IAGP)
abnormal glucose homeostasis  (IAGP)
abnormal glucose tolerance  (IAGP)
abnormal glycogen homeostasis  (IAGP)
abnormal heart echocardiography feature  (IAGP)
abnormal hepatic cord morphology  (IAGP)
abnormal hepatobiliary system development  (IAGP)
abnormal hepatobiliary system physiology  (IAGP)
abnormal hepatoblast differentiation  (IAGP)
abnormal hepatocyte morphology  (IAGP)
abnormal hepatocyte physiology  (IAGP)
abnormal homeostasis  (IAGP)
abnormal inflammatory response  (IAGP)
abnormal insulin clearance  (IAGP)
abnormal intestinal cholesterol absorption  (IAGP)
abnormal intrahepatic bile duct morphology  (IAGP)
abnormal iron homeostasis  (IAGP)
abnormal kidney development  (IAGP)
abnormal lipid homeostasis  (IAGP)
abnormal lipid level  (IAGP)
abnormal lipid oxidation  (IAGP)
abnormal liver lobule morphology  (IAGP)
abnormal liver morphology  (IAGP)
abnormal liver parenchyma morphology  (IAGP)
abnormal liver physiology  (IAGP)
abnormal liver regeneration  (IAGP)
abnormal liver sinusoid morphology  (IAGP)
abnormal lysosome morphology  (IAGP)
abnormal macrophage morphology  (IAGP)
abnormal metabolism  (IAGP)
abnormal mitochondrial ATP synthesis coupled electron transport  (IAGP)
abnormal mitochondrial crista morphology  (IAGP)
abnormal mitochondrial inner membrane morphology  (IAGP)
abnormal mitochondrial morphology  (IAGP)
abnormal mitochondrial physiology  (IAGP)
abnormal mitochondrial shape  (IAGP)
abnormal mitophagy  (IAGP)
abnormal mitosis  (IAGP)
abnormal NK T cell physiology  (IAGP)
abnormal nucleotide metabolism  (IAGP)
abnormal oval cell morphology  (IAGP)
abnormal oval cell physiology  (IAGP)
abnormal pancreatic beta cell physiology  (IAGP)
abnormal phospholipid level  (IAGP)
abnormal phytosterol level  (IAGP)
abnormal portal lobule morphology  (IAGP)
abnormal postnatal growth  (IAGP)
abnormal redox activity  (IAGP)
abnormal respiratory electron transport chain  (IAGP)
abnormal response to injury  (IAGP)
abnormal selenium level  (IAGP)
abnormal snout skin morphology  (IAGP)
abnormal spine curvature  (IAGP)
abnormal sterol level  (IAGP)
abnormal susceptibility to injury induced morbidity/mortality  (IAGP)
abnormal thrombosis  (IAGP)
abnormal thymus development  (IAGP)
abnormal tricarboxylic acid cycle  (IAGP)
abnormal triglyceride level  (IAGP)
abnormal urine homeostasis  (IAGP)
abnormal vasodilation  (IAGP)
abnormal xenobiotic pharmacokinetics  (IAGP)
anemia  (IAGP)
bile duct hyperplasia  (IAGP)
bile duct proliferation  (IAGP)
cachexia  (IAGP)
calcified skin  (IAGP)
calcinosis  (IAGP)
cardiac fibrosis  (IAGP)
cholestasis  (IAGP)
decreased acute inflammation  (IAGP)
decreased B cell number  (IAGP)
decreased basal metabolism  (IAGP)
decreased bile salt level  (IAGP)
decreased blood urea nitrogen level  (IAGP)
decreased body length  (IAGP)
decreased body size  (IAGP)
decreased body weight  (IAGP)
decreased bone mineral density  (IAGP)
decreased brown adipose tissue amount  (IAGP)
decreased brown fat cell lipid droplet size  (IAGP)
decreased cardiac cell glucose uptake  (IAGP)
decreased cholesterol efflux  (IAGP)
decreased circulating alanine transaminase level  (IAGP)
decreased circulating alkaline phosphatase level  (IAGP)
decreased circulating amylase level  (IAGP)
decreased circulating aspartate transaminase level  (IAGP)
decreased circulating calcium level  (IAGP)
decreased circulating cholesterol level  (IAGP)
decreased circulating corticosterone level  (IAGP)
decreased circulating creatinine level  (IAGP)
decreased circulating cysteine level  (IAGP)
decreased circulating free fatty acids level  (IAGP)
decreased circulating glucagon level  (IAGP)
decreased circulating glucose level  (IAGP)
decreased circulating glycerol level  (IAGP)
decreased circulating HDL cholesterol level  (IAGP)
decreased circulating insulin level  (IAGP)
decreased circulating insulin-like growth factor I level  (IAGP)
decreased circulating ketone body level  (IAGP)
decreased circulating LDL cholesterol level  (IAGP)
decreased circulating leptin level  (IAGP)
decreased circulating phospholipid level  (IAGP)
decreased circulating serum albumin level  (IAGP)
decreased circulating thyroxine level  (IAGP)
decreased circulating triglyceride level  (IAGP)
decreased circulating unsaturated transferrin level  (IAGP)
decreased circulating VLDL cholesterol level  (IAGP)
decreased circulating VLDL triglyceride level  (IAGP)
decreased cysteine level  (IAGP)
decreased double-negative T cell number  (IAGP)
decreased fasting circulating glucose level  (IAGP)
decreased fatty acid beta-oxidation  (IAGP)
decreased fatty acid oxidation  (IAGP)
decreased fatty acids level  (IAGP)
decreased glycogen catabolism rate  (IAGP)
decreased glycogen level  (IAGP)
decreased gonadal fat pad weight  (IAGP)
decreased heart weight  (IAGP)
decreased hepatic glucose production  (IAGP)
decreased hepatocyte number  (IAGP)
decreased hepatocyte proliferation  (IAGP)
decreased incidence of induced tumors  (IAGP)
decreased incidence of tumors by chemical induction  (IAGP)
decreased inguinal fat pad weight  (IAGP)
decreased insulin secretion  (IAGP)
decreased intestinal cholesterol absorption  (IAGP)
decreased kidney copper level  (IAGP)
decreased kidney weight  (IAGP)
decreased leukocyte cell number  (IAGP)
decreased litter size  (IAGP)
decreased liver cholesterol level  (IAGP)
decreased liver copper level  (IAGP)
decreased liver free fatty acids level  (IAGP)
decreased liver function  (IAGP)
decreased liver glycogen level  (IAGP)
decreased liver iron level  (IAGP)
decreased liver manganese level  (IAGP)
decreased liver regeneration  (IAGP)
decreased liver triglyceride level  (IAGP)
decreased liver tumor incidence  (IAGP)
decreased liver weight  (IAGP)
decreased lymphocyte cell number  (IAGP)
decreased mitochondrial number  (IAGP)
decreased NK T cell number  (IAGP)
decreased pancreatic beta cell mass  (IAGP)
decreased percent body fat/body weight  (IAGP)
decreased physiological sensitivity to xenobiotic  (IAGP)
decreased phytosterol level  (IAGP)
decreased respiratory quotient  (IAGP)
decreased retroperitoneal fat pad weight  (IAGP)
decreased saturated fatty acids level  (IAGP)
decreased sensitivity to xenobiotic induced morbidity/mortality  (IAGP)
decreased spleen iron level  (IAGP)
decreased spleen white pulp amount  (IAGP)
decreased susceptibility to atherosclerosis  (IAGP)
decreased susceptibility to diet-induced obesity  (IAGP)
decreased susceptibility to hepatic steatosis  (IAGP)
decreased susceptibility to injury  (IAGP)
decreased systemic arterial diastolic blood pressure  (IAGP)
decreased T cell number  (IAGP)
decreased total body fat amount  (IAGP)
decreased total fat pad weight  (IAGP)
decreased triglyceride lipase activity  (IAGP)
decreased unsaturated fatty acids level  (IAGP)
decreased urine uric acid level  (IAGP)
decreased white adipose tissue amount  (IAGP)
decreased white fat cell lipid droplet size  (IAGP)
dilated bile duct  (IAGP)
dilated mitochondria  (IAGP)
distended abdomen  (IAGP)
enhanced behavioral response to xenobiotic  (IAGP)
enhanced lipolysis  (IAGP)
enlarged adrenal glands  (IAGP)
enlarged gallbladder  (IAGP)
enlarged liver  (IAGP)
enlarged spleen  (IAGP)
female infertility  (IAGP)
focal hepatic necrosis  (IAGP)
genetic imprinting  (IAGP)
hemochromatosis  (IAGP)
hemoperitoneum  (IAGP)
hemorrhagic ascites  (IAGP)
hemosiderosis  (IAGP)
hepatic necrosis  (IAGP)
hepatic steatosis  (IAGP)
hyperactivity  (IAGP)
hyperglycemia  (IAGP)
hypoactivity  (IAGP)
hypoglycemia  (IAGP)
impaired autophagy  (IAGP)
impaired blood coagulation  (IAGP)
impaired exercise endurance  (IAGP)
impaired gluconeogenesis  (IAGP)
impaired glucose tolerance  (IAGP)
impaired lipolysis  (IAGP)
impaired wound healing  (IAGP)
improved glucose tolerance  (IAGP)
increased acute inflammation  (IAGP)
increased alkaline phosphatase activity  (IAGP)
increased apoptosis  (IAGP)
increased bile salt level  (IAGP)
increased bleeding time  (IAGP)
increased body weight  (IAGP)
increased brown fat lipid droplet number  (IAGP)
increased carbon dioxide production  (IAGP)
increased carcinoma incidence  (IAGP)
increased cell nucleus count  (IAGP)
increased cell proliferation  (IAGP)
increased cellular glucose import  (IAGP)
increased cholangiocarcinoma incidence  (IAGP)
increased cholesterol level  (IAGP)
increased circulating alanine transaminase level  (IAGP)
increased circulating alkaline phosphatase level  (IAGP)
increased circulating ammonia level  (IAGP)
increased circulating aspartate transaminase level  (IAGP)
increased circulating bilirubin level  (IAGP)
increased circulating carnitine level  (IAGP)
increased circulating cholesterol level  (IAGP)
increased circulating ferritin level  (IAGP)
increased circulating free fatty acids level  (IAGP)
increased circulating glucagon level  (IAGP)
increased circulating glucose level  (IAGP)
increased circulating growth hormone level  (IAGP)
increased circulating HDL cholesterol level  (IAGP)
increased circulating insulin level  (IAGP)
increased circulating interleukin-1 beta level  (IAGP)
increased circulating interleukin-18 level  (IAGP)
increased circulating interleukin-6 level  (IAGP)
increased circulating iron level  (IAGP)
increased circulating ketone body level  (IAGP)
increased circulating lactate dehydrogenase level  (IAGP)
increased circulating lactate level  (IAGP)
increased circulating LDL cholesterol level  (IAGP)
increased circulating lysine level  (IAGP)
increased circulating methionine level  (IAGP)
increased circulating phospholipid level  (IAGP)
increased circulating phytosterol level  (IAGP)
increased circulating progesterone level  (IAGP)
increased circulating proline level  (IAGP)
increased circulating serine level  (IAGP)
increased circulating testosterone level  (IAGP)
increased circulating threonine level  (IAGP)
increased circulating thyroxine level  (IAGP)
increased circulating triglyceride level  (IAGP)
increased circulating triiodothyronine level  (IAGP)
increased energy expenditure  (IAGP)
increased fasting circulating glucose level  (IAGP)
increased fatty acid oxidation  (IAGP)
increased fatty acids level  (IAGP)
increased hamartoma incidence  (IAGP)
increased hematocrit  (IAGP)
increased hepatobiliary system tumor incidence  (IAGP)
increased hepatocellular carcinoma incidence  (IAGP)
increased hepatocyte apoptosis  (IAGP)
increased hepatocyte karyomegaly  (IAGP)
increased hepatocyte number  (IAGP)
increased hepatocyte proliferation  (IAGP)
increased hepatoma incidence  (IAGP)
increased incidence of tumors by chemical induction  (IAGP)
increased insulin secretion  (IAGP)
increased insulin sensitivity  (IAGP)
increased interleukin-6 secretion  (IAGP)
increased lean body mass  (IAGP)
increased liver adenoma incidence  (IAGP)
increased liver cholesterol level  (IAGP)
increased liver copper level  (IAGP)
increased liver free fatty acids level  (IAGP)
increased liver glycogen level  (IAGP)
increased liver iron level  (IAGP)
increased liver triglyceride level  (IAGP)
increased liver tumor incidence  (IAGP)
increased liver weight  (IAGP)
increased metastatic potential  (IAGP)
increased mitochondrial DNA content  (IAGP)
increased mitochondrial number  (IAGP)
increased mitochondrial size  (IAGP)
increased monocyte cell number  (IAGP)
increased neutrophil cell number  (IAGP)
increased oxygen consumption  (IAGP)
increased pancreas weight  (IAGP)
increased pancreatic alpha cell number  (IAGP)
increased pancreatic alpha cell proliferation  (IAGP)
increased pancreatic beta cell mass  (IAGP)
increased partial thromboplastin time  (IAGP)
increased physiological sensitivity to xenobiotic  (IAGP)
increased prothrombin time  (IAGP)
increased respiratory quotient  (IAGP)
increased saturated fatty acids level  (IAGP)
increased sensitivity to induced morbidity/mortality  (IAGP)
increased sensitivity to xenobiotic induced morbidity/mortality  (IAGP)
increased spleen iron level  (IAGP)
increased susceptibility to atherosclerosis  (IAGP)
increased susceptibility to autoimmune diabetes  (IAGP)
increased susceptibility to bacterial infection induced morbidity/mortality  (IAGP)
increased susceptibility to diet-induced obesity  (IAGP)
increased susceptibility to injury  (IAGP)
increased susceptibility to weight gain  (IAGP)
increased triglyceride level  (IAGP)
increased tumor latency  (IAGP)
increased tumor necrosis factor secretion  (IAGP)
increased unsaturated fatty acids level  (IAGP)
increased urine selenium level  (IAGP)
increased vascular endothelial cell number  (IAGP)
insulin resistance  (IAGP)
intrahepatic cholestasis  (IAGP)
jaundice  (IAGP)
lethargy  (IAGP)
limb grasping  (IAGP)
liver cirrhosis  (IAGP)
liver failure  (IAGP)
liver fibrosis  (IAGP)
liver hemorrhage  (IAGP)
liver hyperplasia  (IAGP)
liver inflammation  (IAGP)
macrovesicular hepatic steatosis  (IAGP)
Mallory bodies  (IAGP)
microvesicular hepatic steatosis  (IAGP)
no abnormal phenotype detected  (IAGP)
oligozoospermia  (IAGP)
oxidative stress  (IAGP)
pale liver  (IAGP)
pancreatic islet hyperplasia  (IAGP)
patent ductus venosus  (IAGP)
paternal imprinting  (IAGP)
perinatal lethality, incomplete penetrance  (IAGP)
polycythemia  (IAGP)
polydipsia  (IAGP)
polyploidy  (IAGP)
polyuria  (IAGP)
postnatal growth retardation  (IAGP)
postnatal lethality, complete penetrance  (IAGP)
postnatal lethality, incomplete penetrance  (IAGP)
pregnancy-related premature death  (IAGP)
premature death  (IAGP)
prolonged PR interval  (IAGP)
prolonged QRS complex duration  (IAGP)
reddish skin  (IAGP)
reduced fertility  (IAGP)
reticulocytosis  (IAGP)
slow movement  (IAGP)
slow postnatal weight gain  (IAGP)
small liver  (IAGP)
spleen atrophy  (IAGP)
subcutaneous hemorrhage  (IAGP)
teratozoospermia  (IAGP)
uterine hemorrhage  (IAGP)
vaginal hemorrhage  (IAGP)
weight loss  (IAGP)
References

References - curated
1. RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:9867845   PMID:10349636   PMID:10686614   PMID:10825207   PMID:10866673   PMID:10938127   PMID:10949030   PMID:11042159   PMID:11076861   PMID:11108252   PMID:11171994   PMID:11217851  
PMID:11287642   PMID:11557972   PMID:11909940   PMID:12176043   PMID:12466851   PMID:12482952   PMID:12507915   PMID:12529398   PMID:12538623   PMID:12566435   PMID:12588884   PMID:12606357  
PMID:12697746   PMID:12829628   PMID:12929087   PMID:14550306   PMID:14613934   PMID:14614859   PMID:14660662   PMID:14749836   PMID:14769918   PMID:14985368   PMID:15070743   PMID:15082532  
PMID:15199412   PMID:15331603   PMID:15347677   PMID:15372107   PMID:15389868   PMID:15480996   PMID:15569412   PMID:15638810   PMID:15687502   PMID:15717863   PMID:15732085   PMID:15735717  
PMID:15738389   PMID:15798202   PMID:15821749   PMID:15841208   PMID:15899812   PMID:15908240   PMID:15930274   PMID:15958390   PMID:15989949   PMID:16006652   PMID:16054078   PMID:16122419  
PMID:16141072   PMID:16141073   PMID:16155866   PMID:16202981   PMID:16214396   PMID:16278235   PMID:16293230   PMID:16301529   PMID:16374520   PMID:16382155   PMID:16404553   PMID:16449639  
PMID:16467350   PMID:16469705   PMID:16527892   PMID:16543947   PMID:16557553   PMID:16679292   PMID:16710476   PMID:16717184   PMID:16738330   PMID:16804073   PMID:16807293   PMID:16831601  
PMID:16845389   PMID:16880400   PMID:16921198   PMID:16940190   PMID:16946132   PMID:16964311   PMID:16977322   PMID:17030618   PMID:17101329   PMID:17151194   PMID:17200715   PMID:17256747  
PMID:17283057   PMID:17295835   PMID:17374357   PMID:17404621   PMID:17416680   PMID:17442273   PMID:17464988   PMID:17556363   PMID:17557118   PMID:17567478   PMID:17570221   PMID:17597094  
PMID:17646385   PMID:17699762   PMID:17699788   PMID:17854601   PMID:17904103   PMID:17908794   PMID:17942915   PMID:17951359   PMID:17996733   PMID:17998203   PMID:18026104   PMID:18042552  
PMID:18054317   PMID:18083104   PMID:18201277   PMID:18249172   PMID:18316028   PMID:18322014   PMID:18323469   PMID:18325391   PMID:18354499   PMID:18365007   PMID:18373496   PMID:18395093  
PMID:18417483   PMID:18426910   PMID:18434600   PMID:18437205   PMID:18511518   PMID:18573907   PMID:18583462   PMID:18587407   PMID:18590692   PMID:18590693   PMID:18639551   PMID:18666258  
PMID:18669658   PMID:18677409   PMID:18691550   PMID:18692468   PMID:18694957   PMID:18778245   PMID:18784258   PMID:18805792   PMID:18820241   PMID:18826952   PMID:18952117   PMID:19052228  
PMID:19060448   PMID:19085966   PMID:19095764   PMID:19127517   PMID:19129213   PMID:19167327   PMID:19171122   PMID:19188430   PMID:19201688   PMID:19229314   PMID:19234449   PMID:19270695  
PMID:19272382   PMID:19286559   PMID:19295512   PMID:19333233   PMID:19339967   PMID:19356714   PMID:19366863   PMID:19386581   PMID:19414593   PMID:19430492   PMID:19460757   PMID:19528226  
PMID:19551907   PMID:19564419   PMID:19584930   PMID:19596788   PMID:19617532   PMID:19648649   PMID:19662685   PMID:19666474   PMID:19676108   PMID:19690176   PMID:19718708   PMID:19720742  
PMID:19729839   PMID:19752163   PMID:19805913   PMID:19830819   PMID:19838201   PMID:19878874   PMID:19887370   PMID:19889634   PMID:19917719   PMID:19945406   PMID:20018698   PMID:20019186  
PMID:20035057   PMID:20041412   PMID:20052656   PMID:20074531   PMID:20080598   PMID:20080689   PMID:20080763   PMID:20103709   PMID:20173742   PMID:20178984   PMID:20197055   PMID:20348245  
PMID:20348923   PMID:20375200   PMID:20385802   PMID:20399150   PMID:20404090   PMID:20404163   PMID:20432257   PMID:20436477   PMID:20478530   PMID:20483735   PMID:20484730   PMID:20498273  
PMID:20522742   PMID:20530665   PMID:20628150   PMID:20628156   PMID:20628198   PMID:20639493   PMID:20643348   PMID:20645310   PMID:20651146   PMID:20675406   PMID:20689553   PMID:20691904  
PMID:20823455   PMID:20829355   PMID:20830789   PMID:20835892   PMID:20837017   PMID:20840855   PMID:20841350   PMID:20862286   PMID:20876720   PMID:21047994   PMID:21059846   PMID:21075309  
PMID:21081708   PMID:21109193   PMID:21118154   PMID:21123947   PMID:21130157   PMID:21135245   PMID:21146511   PMID:21147780   PMID:21179166   PMID:21195347   PMID:21216847   PMID:21220515  
PMID:21253590   PMID:21282722   PMID:21284987   PMID:21310927   PMID:21343303   PMID:21347690   PMID:21356197   PMID:21362632   PMID:21364286   PMID:21383171   PMID:21385828   PMID:21386907  
PMID:21388966   PMID:21406557   PMID:21407177   PMID:21435447   PMID:21454568   PMID:21458307   PMID:21464441   PMID:21465509   PMID:21479224   PMID:21482667   PMID:21482715   PMID:21507897  
PMID:21531907   PMID:21533282   PMID:21538442   PMID:21575863   PMID:21592121   PMID:21593203   PMID:21614002   PMID:21617040   PMID:21684247   PMID:21705713   PMID:21712364   PMID:21720388  
PMID:21721031   PMID:21723501   PMID:21745592   PMID:21747166   PMID:21748766   PMID:21775727   PMID:21841161   PMID:21855804   PMID:21885532   PMID:21898486   PMID:21907140   PMID:21957292  
PMID:21966465   PMID:22002056   PMID:22022477   PMID:22042854   PMID:22052287   PMID:22086418   PMID:22147007   PMID:22160727   PMID:22172721   PMID:22190590   PMID:22198266   PMID:22202803  
PMID:22216203   PMID:22231784   PMID:22266220   PMID:22275361   PMID:22290433   PMID:22291093   PMID:22308354   PMID:22326219   PMID:22326225   PMID:22334075   PMID:22343943   PMID:22355113  
PMID:22355653   PMID:22386877   PMID:22397685   PMID:22411789   PMID:22414809   PMID:22427360   PMID:22457330   PMID:22460046   PMID:22460952   PMID:22461615   PMID:22466650   PMID:22484817  
PMID:22491424   PMID:22518004   PMID:22521878   PMID:22555437   PMID:22581287   PMID:22586274   PMID:22610093   PMID:22621923   PMID:22627062   PMID:22645641   PMID:22677785   PMID:22682225  
PMID:22684873   PMID:22688336   PMID:22698917   PMID:22736457   PMID:22761311   PMID:22761897   PMID:22772466   PMID:22773877   PMID:22789539   PMID:22791291   PMID:22791808   PMID:22802922  
PMID:22808024   PMID:22820288   PMID:22912762   PMID:22927645   PMID:22969154   PMID:22992773   PMID:23018454   PMID:23038251   PMID:23040070   PMID:23049704   PMID:23064264   PMID:23064266  
PMID:23074225   PMID:23084476   PMID:23085101   PMID:23085254   PMID:23091169   PMID:23114598   PMID:23142780   PMID:23160527   PMID:23257354   PMID:23257357   PMID:23267081   PMID:23271722  
PMID:23275615   PMID:23291412   PMID:23299886   PMID:23305736   PMID:23305737   PMID:23353867   PMID:23355893   PMID:23372727   PMID:23375376   PMID:23410872   PMID:23429704   PMID:23451233  
PMID:23454765   PMID:23479742   PMID:23508104   PMID:23519111   PMID:23527105   PMID:23529017   PMID:23545937   PMID:23555249   PMID:23563179   PMID:23580202   PMID:23610395   PMID:23639811  
PMID:23639813   PMID:23676495   PMID:23684612   PMID:23716700   PMID:23733885   PMID:23777768   PMID:23782652   PMID:23787969   PMID:23813570   PMID:23814116   PMID:23832089   PMID:23840792  
PMID:23840878   PMID:23847050   PMID:23861371   PMID:23861731   PMID:23869228   PMID:23911927   PMID:23918928   PMID:23918930   PMID:23921556   PMID:23940800   PMID:23941873   PMID:23986435  
PMID:23991283   PMID:23995686   PMID:24011591   PMID:24019758   PMID:24027047   PMID:24037094   PMID:24072782   PMID:24101515   PMID:24113455   PMID:24120137   PMID:24120911   PMID:24141775  
PMID:24154728   PMID:24186865   PMID:24186947   PMID:24213574   PMID:24262277   PMID:24274065   PMID:24302768   PMID:24316079   PMID:24316982   PMID:24358267   PMID:24362933   PMID:24375466  
PMID:24379438   PMID:24395807   PMID:24401271   PMID:24421394   PMID:24440788   PMID:24447392   PMID:24449835   PMID:24454764   PMID:24458359   PMID:24464187   PMID:24467246   PMID:24492981  
PMID:24498425   PMID:24501215   PMID:24508125   PMID:24511105   PMID:24516236   PMID:24517230   PMID:24520408   PMID:24535827   PMID:24548803   PMID:24550004   PMID:24613310   PMID:24631193  
PMID:24643070   PMID:24646470   PMID:24650547   PMID:24667526   PMID:24675090   PMID:24692541   PMID:24700412   PMID:24705491   PMID:24713658   PMID:24719406   PMID:24726645   PMID:24731446  
PMID:24737860   PMID:24760138   PMID:24760755   PMID:24768164   PMID:24769730   PMID:24802098   PMID:24807718   PMID:24815875   PMID:24818992   PMID:24831725   PMID:24840851   PMID:24843047  
PMID:24844465   PMID:24876386   PMID:24889609   PMID:24904118   PMID:24944078   PMID:24947365   PMID:24947527   PMID:24954415   PMID:24956378   PMID:24980960   PMID:24981838   PMID:24990886  
PMID:24995976   PMID:25004090   PMID:25008183   PMID:25015658   PMID:25028523   PMID:25043045   PMID:25043815   PMID:25043817   PMID:25049227   PMID:25061560   PMID:25068656   PMID:25072958  
PMID:25075125   PMID:25082895   PMID:25131199   PMID:25131933   PMID:25132272   PMID:25132496   PMID:25143535   PMID:25147298   PMID:25155613   PMID:25163657   PMID:25176150   PMID:25193593  
PMID:25205222   PMID:25209997   PMID:25234944   PMID:25239141   PMID:25249504   PMID:25299392   PMID:25300578   PMID:25378657   PMID:25379404   PMID:25414100   PMID:25421714   PMID:25440060  
PMID:25448926   PMID:25450972   PMID:25456069   PMID:25485836   PMID:25502566   PMID:25512522   PMID:25525877   PMID:25526090   PMID:25535367   PMID:25536043   PMID:25542313   PMID:25566190  
PMID:25620427   PMID:25621497   PMID:25628461   PMID:25646773   PMID:25651183   PMID:25683716   PMID:25691624   PMID:25695629   PMID:25722343   PMID:25760036   PMID:25772357   PMID:25806685  
PMID:25849138   PMID:25870278   PMID:25885474   PMID:25892224   PMID:25902529   PMID:25918248   PMID:25922078   PMID:25961460   PMID:25961502   PMID:25963540   PMID:25970332   PMID:26038580  
PMID:26039452   PMID:26043259   PMID:26054543   PMID:26100214   PMID:26123588   PMID:26131558   PMID:26150517   PMID:26190650   PMID:26216424   PMID:26233958   PMID:26235536   PMID:26296882  
PMID:26303292   PMID:26324945   PMID:26340929   PMID:26344103   PMID:26368306   PMID:26372644   PMID:26374608   PMID:26381935   PMID:26387534   PMID:26411342   PMID:26431207   PMID:26453800  
PMID:26483381   PMID:26485505   PMID:26491162   PMID:26492920   PMID:26494620   PMID:26502405   PMID:26504083   PMID:26508638   PMID:26508642   PMID:26511317   PMID:26525535   PMID:26549445  
PMID:26569409   PMID:26571396   PMID:26581598   PMID:26586440   PMID:26611104   PMID:26650570   PMID:26653333   PMID:26681751   PMID:26682986   PMID:26695075   PMID:26696639   PMID:26699479  
PMID:26701651   PMID:26711253   PMID:26724858   PMID:26725321   PMID:26732653   PMID:26776516   PMID:26808690   PMID:26827822   PMID:26838599   PMID:26857837   PMID:26865635   PMID:26876204  
PMID:26876939   PMID:26882989   PMID:26910791   PMID:26947074   PMID:26965651   PMID:26973245   PMID:26976120   PMID:26976243   PMID:26999604   PMID:27022105   PMID:27032374   PMID:27041581  
PMID:27044864   PMID:27050511   PMID:27050513   PMID:27060105   PMID:27088858   PMID:27091985   PMID:27124661   PMID:27131367   PMID:27150392   PMID:27159394   PMID:27166281   PMID:27189088  
PMID:27196572   PMID:27197076   PMID:27208177   PMID:27211490   PMID:27213816   PMID:27226639   PMID:27234787   PMID:27262435   PMID:27298334   PMID:27311593   PMID:27317662   PMID:27320917  
PMID:27322467   PMID:27325701   PMID:27345495   PMID:27358050   PMID:27374329   PMID:27383786   PMID:27384305   PMID:27394961   PMID:27400128   PMID:27421703   PMID:27427417   PMID:27456484  
PMID:27480224   PMID:27483343   PMID:27514483   PMID:27521269   PMID:27526095   PMID:27531557   PMID:27535619   PMID:27553638   PMID:27554475   PMID:27568561   PMID:27586651   PMID:27613809  
PMID:27616656   PMID:27631493   PMID:27658772   PMID:27677358   PMID:27689697   PMID:27708333   PMID:27711079   PMID:27728806   PMID:27738106   PMID:27752144   PMID:27754788   PMID:27797907  
PMID:27815072   PMID:27827807   PMID:27864295   PMID:27869648   PMID:27879317   PMID:27895309   PMID:27911810   PMID:27956496   PMID:27974211   PMID:28000760   PMID:28005946   PMID:28030556  
PMID:28052241   PMID:28089566   PMID:28094767   PMID:28098217   PMID:28100771   PMID:28115466   PMID:28120397   PMID:28129664   PMID:28131861   PMID:28134624   PMID:28143937   PMID:28167773  
PMID:28183717   PMID:28188211   PMID:28235042   PMID:28244871   PMID:28258223   PMID:28283651   PMID:28290449   PMID:28300161   PMID:28318489   PMID:28327662   PMID:28330995   PMID:28334004  
PMID:28346406   PMID:28356345   PMID:28370295   PMID:28373486   PMID:28380348   PMID:28380375   PMID:28407687   PMID:28428350   PMID:28432216   PMID:28434881   PMID:28438754   PMID:28446774  
PMID:28459466   PMID:28462079   PMID:28483921   PMID:28486106   PMID:28508477   PMID:28514453   PMID:28533219   PMID:28533521   PMID:28536120   PMID:28575497   PMID:28591582   PMID:28591635  
PMID:28591638   PMID:28592560   PMID:28608850   PMID:28609656   PMID:28622511   PMID:28634191   PMID:28642969   PMID:28658624   PMID:28671671   PMID:28694219   PMID:28710407   PMID:28723568  
PMID:28724798   PMID:28751722   PMID:28753426   PMID:28758902   PMID:28768177   PMID:28775125   PMID:28797077   PMID:28808340   PMID:28838957   PMID:28844880   PMID:28846071   PMID:28855398  
PMID:28857232   PMID:28875549   PMID:28877461   PMID:28877911   PMID:28898696   PMID:28919113   PMID:28923959   PMID:28952396   PMID:28961327   PMID:28963035   PMID:28988823   PMID:28993411  
PMID:29021624   PMID:29038293   PMID:29056338   PMID:29089902   PMID:29107293   PMID:29109128   PMID:29127434   PMID:29136504   PMID:29141219   PMID:29149604   PMID:29157602   PMID:29203511  
PMID:29208699   PMID:29217477   PMID:29222328   PMID:29232555   PMID:29263303   PMID:29300910   PMID:29303509   PMID:29303644   PMID:29320742   PMID:29320745   PMID:29331071   PMID:29335275  
PMID:29339380   PMID:29386660   PMID:29388792   PMID:29401631   PMID:29452147   PMID:29475944   PMID:29482530   PMID:29486138   PMID:29514097   PMID:29515023   PMID:29528335   PMID:29530977  
PMID:29541410   PMID:29545368   PMID:29558367   PMID:29558368   PMID:29559473   PMID:29562234   PMID:29576536   PMID:29601782   PMID:29610518   PMID:29617643   PMID:29657029   PMID:29694881  
PMID:29712669   PMID:29718710   PMID:29720662   PMID:29729199   PMID:29752404   PMID:29764990   PMID:29776962   PMID:29799837   PMID:29803835   PMID:29844188   PMID:29847571   PMID:29871934  
PMID:29873790   PMID:29890136   PMID:29894692   PMID:29925501   PMID:29937272   PMID:29967292   PMID:29972776   PMID:29983910   PMID:30027142   PMID:30034633   PMID:30036393   PMID:30057273  
PMID:30097285   PMID:30165041   PMID:30174302   PMID:30181179   PMID:30201683   PMID:30201950   PMID:30209397   PMID:30235271   PMID:30264435   PMID:30271947   PMID:30297359   PMID:30316865  
PMID:30327349   PMID:30356218   PMID:30366594   PMID:30389665   PMID:30406697   PMID:30442920   PMID:30445013   PMID:30446669   PMID:30448409   PMID:30454647   PMID:30459233   PMID:30463916  
PMID:30470740   PMID:30482806   PMID:30487265   PMID:30500822   PMID:30509307   PMID:30516845   PMID:30530497   PMID:30532187   PMID:30540938   PMID:30541894   PMID:30559290   PMID:30567480  
PMID:30576248   PMID:30582764   PMID:30591434   PMID:30605676   PMID:30617219   PMID:30635284   PMID:30639734   PMID:30645148   PMID:30655274   PMID:30659012   PMID:30659202   PMID:30664851  
PMID:30677458   PMID:30679672   PMID:30704899   PMID:30713111   PMID:30733279   PMID:30770439   PMID:30772303   PMID:30787318   PMID:30813227   PMID:30826053   PMID:30831144   PMID:30833408  
PMID:30835508   PMID:30842658   PMID:30877170   PMID:30898969   PMID:30906911   PMID:30926848   PMID:30929899   PMID:30930169   PMID:30952864   PMID:30952952   PMID:30982732   PMID:30983568  
PMID:30988397   PMID:30996131   PMID:31006591   PMID:31026811   PMID:31039007   PMID:31061415   PMID:31095752   PMID:31097586   PMID:31101736   PMID:31118412   PMID:31128214   PMID:31170413  
PMID:31185306   PMID:31189717   PMID:31207604   PMID:31209109   PMID:31227231   PMID:31249303   PMID:31271748   PMID:31287995   PMID:31289229   PMID:31292296   PMID:31293973   PMID:31295319  
PMID:31295533   PMID:31301081   PMID:31339428   PMID:31393852   PMID:31408437   PMID:31451639   PMID:31469182   PMID:31474565   PMID:31478838   PMID:31484072   PMID:31489369   PMID:31492698  
PMID:31541078   PMID:31554967   PMID:31597092   PMID:31604805   PMID:31630801   PMID:31673045   PMID:31673703   PMID:31733337   PMID:31778654   PMID:31792171   PMID:31843886   PMID:31848340  
PMID:31857346   PMID:31866067   PMID:31879337   PMID:31907348   PMID:31911946   PMID:31918922   PMID:31919282   PMID:31924786   PMID:31932477   PMID:31959914   PMID:31961719   PMID:31998431  
PMID:32005828   PMID:32012211   PMID:32063360   PMID:32117320   PMID:32139604   PMID:32149416   PMID:32156724   PMID:32170127   PMID:32186897   PMID:32188584   PMID:32203162   PMID:32213347  
PMID:32214246   PMID:32231246   PMID:32246987   PMID:32253259   PMID:32273468   PMID:32300166   PMID:32350388   PMID:32372053   PMID:32381628   PMID:32381739   PMID:32408014   PMID:32442405  
PMID:32451369   PMID:32453730   PMID:32460011   PMID:32470318   PMID:32502381   PMID:32516028   PMID:32544390   PMID:32546802   PMID:32601222   PMID:32620541   PMID:32631996   PMID:32701506  
PMID:32708970   PMID:32727846   PMID:32733884   PMID:32916153   PMID:32917816   PMID:32926856   PMID:33029008   PMID:33067530   PMID:33147210   PMID:33152322   PMID:33182326   PMID:33271332  
PMID:33315519   PMID:33345777   PMID:33495342   PMID:33539533  


Genomics


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301661Tshp13_mtooth shape 13 (mouse)Not determined13123404636Mouse
1301227Skull19_mskull morphology 19 (mouse)Not determined13123404636Mouse
1301890Adip7_madiposity 7 (mouse)Not determined13123404636Mouse
1301255Cd4ts6_mCD4 T cell subset 6 (mouse)Not determined13133994099Mouse
10449140Eosn2_meosinophil differential 2 (mouse)134672634046726Mouse
15039338Nmrs34_mNAFLD-associated magnetic resonance shift 34 (mouse)134672634046726Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:134
Count of miRNA genes:128
Interacting mature miRNAs:133
Transcripts:ENSMUST00000168736
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000168736
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl133,186,206 - 3,189,317 (+)Ensembl
RefSeq Acc Id: ENSMUST00000222775
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl133,169,994 - 3,173,117 (+)Ensembl
RefSeq Acc Id: ENSMUST00000223482
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl133,149,475 - 3,189,678 (+)Ensembl
RefSeq Acc Id: NR_001581
RefSeq Status: PROVISIONAL
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39133,199,475 - 3,239,678 (+)NCBI
GRCm38133,149,475 - 3,189,678 (+)ENTREZGENE
MGSCv37133,148,721 - 3,188,924 (+)RGD
Celera133,135,860 - 3,175,371 (+)RGD
cM Map13 ENTREZGENE
Sequence:
Protein Sequences
GenBank Protein BAB24683 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences

Promoters
RGD ID:8679494
Promoter ID:EPDNEW_M17778
Type:multiple initiation site
Name:Speer6-ps1_1
Description:Mus musculus spermatogenesis associated glutamate -rich protein6, pseudogene 1 (Speer6-ps1), non-coding RNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38133,149,459 - 3,149,519EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000091304 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000223482 ENTREZGENE
MGD MGI:1920516 ENTREZGENE
NCBI Gene 73266 ENTREZGENE
PhenoGen Speer6-ps1 PhenoGen