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ONTOLOGY REPORT - ANNOTATIONS

Term:amide catabolic process
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Accession:GO:0043605 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of an amide, any derivative of an oxoacid in which an acidic hydroxy group has been replaced by an amino or substituted amino group.
Synonyms:exact_synonym: cellular amide catabolic process


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amide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase involved_in ISO
IEA		 MGI:1857117 (MGI:3640719|PMID:10720488), (MGI:6478540|PMID:16742956), (MGI:6478860|PMID:8064675)
GO_REF:0000107		 RGD
Ensembl		 PMID:8064675 PMID:10720488 PMID:16742956 GO_REF:0000107 MGI:3640719 MGI:6478540 MGI:6478860 NCBI chr 3:152,398,745...152,422,854
Ensembl chr 3:152,398,747...152,447,088 		JBrowse link
G Gda guanine deaminase involved_in ISO
IEA		 (MGI:6478860|PMID:8064675)
GO_REF:0000107		 RGD
Ensembl		 PMID:8064675 GO_REF:0000107 MGI:6478860 NCBI chr 1:218,903,045...218,982,360
Ensembl chr 1:218,906,815...218,982,416 		JBrowse link
G Nit1 nitrilase 1 involved_in ISO
IEA		 (MGI:5904538|PMID:28373563)
GO_REF:0000107		 RGD
Ensembl		 PMID:28373563 GO_REF:0000107 MGI:5904538 NCBI chr13:83,769,888...83,773,324
Ensembl chr13:83,765,941...83,773,332 		JBrowse link
G Nt5c 5', 3'-nucleotidase, cytosolic involved_in ISO (MGI:1353788|PMID:10681516), (MGI:55510|PMID:6301357) RGD PMID:6301357 PMID:10681516 MGI:1353788 MGI:55510 NCBI chr10:100,739,591...100,742,276
Ensembl chr10:100,739,588...100,741,954 		JBrowse link
G Nt5c1b 5'-nucleotidase, cytosolic IB involved_in ISO (MGI:2153435|PMID:11690631) RGD PMID:11690631 MGI:2153435 NCBI chr 6:33,139,053...33,156,489
Ensembl chr 6:33,139,064...33,156,481 		JBrowse link
G Nt5c2 5'-nucleotidase, cytosolic II involved_in ISO (MGI:6478530|PMID:5560407) RGD PMID:5560407 MGI:6478530 NCBI chr 1:245,770,993...245,896,925
Ensembl chr 1:245,772,277...245,897,913 		JBrowse link
G Pm20d1 peptidase M20 domain containing 1 involved_in ISO
IBA		 (PMID:27374330)
PMID:21873635
(MGI:5796058|PMID:27374330)		 RGD PMID:27374330 PMID:21873635 MGI:5796058, RGD:13792537 NCBI chr13:43,237,954...43,259,999
Ensembl chr13:43,237,971...43,259,999 		JBrowse link
G Uox urate oxidase involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:235,486,867...235,523,053
Ensembl chr 2:235,440,619...235,523,029 		JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in ISO (MGI:3665448|PMID:16462750) RGD PMID:16462750 MGI:3665448 NCBI chr12:7,709,278...7,718,925
Ensembl chr12:7,709,312...7,718,923 		JBrowse link
G Xdh xanthine dehydrogenase involved_in ISO
IEA		 MGI:2448161 (MGI:2447927|PMID:12502743), (MGI:49329|PMID:1590774), (MGI:6306257|PMID:30936145), (MGI:6478097|PMID:29895374), (MGI:6478533|PMID:8226898), (MGI:6478860|PMID:8064675)
GO_REF:0000107		 RGD
Ensembl		 PMID:1590774 PMID:8064675 PMID:8226898 PMID:12502743 PMID:29895374 More... GO_REF:0000107 MGI:2447927 MGI:49329 MGI:6306257 MGI:6478097 MGI:6478533 MGI:6478860 NCBI chr 6:21,530,463...21,592,172
Ensembl chr 6:21,530,113...21,592,268 		JBrowse link
allantoin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Allc allantoicase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:45,179,181...45,214,275
Ensembl chr 6:45,179,187...45,214,223 		JBrowse link
arginine catabolic process to glutamate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Oat ornithine aminotransferase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:187,347,862...187,367,644
Ensembl chr 1:187,347,865...187,367,682 		JBrowse link
histidine catabolic process to glutamate and formamide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amdhd1 amidohydrolase domain containing 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:28,043,923...28,059,156
Ensembl chr 7:28,043,716...28,059,156 		JBrowse link
G Ftcd formimidoyltransferase cyclodeaminase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr20:12,055,203...12,068,717
Ensembl chr20:12,055,208...12,068,735 		JBrowse link
G Hal histidine ammonia lyase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:28,007,449...28,037,701
Ensembl chr 7:28,006,972...28,037,701 		JBrowse link
G Uroc1 urocanate hydratase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 4:122,844,933...122,876,584
Ensembl chr 4:122,844,926...122,876,591 		JBrowse link
histidine catabolic process to glutamate and formate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amdhd1 amidohydrolase domain containing 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:28,043,923...28,059,156
Ensembl chr 7:28,043,716...28,059,156 		JBrowse link
G Ftcd formimidoyltransferase cyclodeaminase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr20:12,055,203...12,068,717
Ensembl chr20:12,055,208...12,068,735 		JBrowse link
G Hal histidine ammonia lyase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:28,007,449...28,037,701
Ensembl chr 7:28,006,972...28,037,701 		JBrowse link
G Uroc1 urocanate hydratase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 4:122,844,933...122,876,584
Ensembl chr 4:122,844,926...122,876,591 		JBrowse link
L-lysine catabolic process to acetyl-CoA via L-pipecolate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pipox pipecolic acid and sarcosine oxidase involved_in ISO
IBA		 (PMID:10642506)
PMID:21873635		 RGD PMID:10642506 PMID:21873635 RGD:13792537 NCBI chr10:62,769,874...62,783,484
Ensembl chr10:62,769,900...62,782,370 		JBrowse link
L-lysine catabolic process to acetyl-CoA via saccharopine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aadat aminoadipate aminotransferase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr16:29,509,392...29,544,332
Ensembl chr16:29,509,394...29,544,332 		JBrowse link
G Aass aminoadipate-semialdehyde synthase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 4:51,606,461...51,663,136
Ensembl chr 4:51,606,462...51,663,136 		JBrowse link
G Dlst dihydrolipoamide S-succinyltransferase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 6:104,758,511...104,783,296
Ensembl chr 6:104,758,631...104,783,296 		JBrowse link
proline catabolic process to glutamate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh4a1 aldehyde dehydrogenase 4 family, member A1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 5:151,880,002...151,905,491
Ensembl chr 5:151,830,701...151,925,345 		JBrowse link
G Iffo2 intermediate filament family orphan 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 5:151,830,900...151,876,948
Ensembl chr 5:151,830,701...151,925,345 		JBrowse link
G Prodh proline dehydrogenase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:82,910,043...82,927,305
Ensembl chr11:82,910,137...82,927,305 		JBrowse link
G Prodh2 proline dehydrogenase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:85,753,558...85,767,165
Ensembl chr 1:85,753,644...85,767,162 		JBrowse link
G Tas1r2 taste 1 receptor member 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 5:151,909,617...151,925,760
Ensembl chr 5:151,830,701...151,925,345 		JBrowse link
tryptophan catabolic process to acetyl-CoA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kynu kynureninase IDA RGD PMID:7236232 RGD:2303721 NCBI chr 3:27,778,646...27,929,470
Ensembl chr 3:27,778,772...27,929,488 		JBrowse link
G Tdo2 tryptophan 2,3-dioxygenase involved_in IDA
IBA		 PMID:21873635 RGD
GO_Central		 PMID:7236232 PMID:21873635 RGD:2303721, RGD:13792537 NCBI chr 2:167,269,581...167,287,511
Ensembl chr 2:167,269,579...167,287,511 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19574
    metabolic process 11556
      catabolic process 2673
        amide catabolic process 27
          L-lysine catabolic process to acetyl-CoA + 4
          L-threonine catabolic process to acetyl-CoA 0
          allantoin catabolic process + 1
          arginine catabolic process to glutamate 1
          atrazine catabolic process to urea 0
          biotin catabolic process 0
          formamide catabolic process 0
          histidine catabolic process to glutamate and formamide 4
          histidine catabolic process to glutamate and formate 4
          methionine catabolic process to succinyl-CoA 0
          negative regulation of amide catabolic process + 0
          positive regulation of amide catabolic process + 0
          proline catabolic process to glutamate + 5
          regulation of amide catabolic process + 0
          tryptophan catabolic process to acetyl-CoA 2
          urea catabolic process + 0
Path 2
Term Annotations click to browse term
  biological_process 19574
    metabolic process 11556
      nitrogen compound metabolic process 9337
        amide metabolic process 1670
          amide catabolic process 27
            L-lysine catabolic process to acetyl-CoA + 4
            L-threonine catabolic process to acetyl-CoA 0
            allantoin catabolic process + 1
            arginine catabolic process to glutamate 1
            atrazine catabolic process to urea 0
            biotin catabolic process 0
            formamide catabolic process 0
            histidine catabolic process to glutamate and formamide 4
            histidine catabolic process to glutamate and formate 4
            methionine catabolic process to succinyl-CoA 0
            negative regulation of amide catabolic process + 0
            positive regulation of amide catabolic process + 0
            proline catabolic process to glutamate + 5
            regulation of amide catabolic process + 0
            tryptophan catabolic process to acetyl-CoA 2
            urea catabolic process + 0
paths to the root