Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:negative regulation of extrinsic apoptotic signaling pathway in absence of ligand
go back to main search page
Accession:GO:2001240 term browser browse the term
Definition:Any process that stops, prevents or reduces the frequency, rate or extent of extrinsic apoptotic signaling pathway in absence of ligand.
Synonyms:exact_synonym: negative regulation of extrinsic apoptotic signalling pathway in absence of ligand
 narrow_synonym: negative regulation of extrinsic apoptosis in absence of ligand
 related_synonym: negative regulation of dependence receptor signaling pathway


show annotations for term's descendants           Sort by:
negative regulation of extrinsic apoptotic signaling pathway in absence of ligand term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGAP2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 involved_in ISO PMID:18469807 UniProt PMID:18469807 RGD:8553892 NCBI chr 5:23,015,777...23,035,943
Ensembl chr 5:23,017,176...23,033,517 		JBrowse link
G BCL2 BCL2 apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8358790) Ensembl
MGI		 PMID:8358790 GO_REF:0000107 NCBI chr 1:158,337,403...158,518,214
Ensembl chr 1:158,337,522...158,518,879 		JBrowse link
G BCL2L10 BCL2 like 10 acts_upstream_of_or_within ISO (PMID:9878060) MGI PMID:9878060 NCBI chr 1:119,594,004...119,607,709 JBrowse link
G COL2A1 collagen type II alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9299161) Ensembl
MGI		 PMID:9299161 GO_REF:0000107 NCBI chr 5:78,350,131...78,380,893
Ensembl chr 5:78,350,137...78,380,718 		JBrowse link
G CSF2 colony stimulating factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:134,354,724...134,357,155
Ensembl chr 2:134,354,724...134,357,155 		JBrowse link
G CTNNA1 catenin alpha 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22411810) Ensembl
MGI		 PMID:22411810 GO_REF:0000107 NCBI chr 2:140,682,776...140,869,828
Ensembl chr 2:140,682,371...140,871,334 		JBrowse link
G CX3CL1 C-X3-C motif chemokine ligand 1 acts_upstream_of_or_within ISO (PMID:18322241), (PMID:18971423) MGI PMID:18322241 PMID:18971423 NCBI chr 6:19,312,351...19,324,439 JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 (PMID:15817220) Ensembl
TreeGrafter
GO_Central
MGI		 PMID:15817220 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:63,970,939...64,328,107
Ensembl chr 4:63,970,807...64,328,105 		JBrowse link
G EYA2 EYA transcriptional coactivator and phosphatase 2 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr17:48,930,682...49,243,789
Ensembl chr17:48,966,814...49,243,739 		JBrowse link
G EYA3 EYA transcriptional coactivator and phosphatase 3 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:85,095,409...85,185,856
Ensembl chr 6:85,095,409...85,185,799 		JBrowse link
G EYA4 EYA transcriptional coactivator and phosphatase 4 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:30,260,784...30,575,593
Ensembl chr 1:30,261,917...30,533,604 		JBrowse link
G FGF10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16956603) Ensembl
MGI		 PMID:16956603 GO_REF:0000107 NCBI chr16:28,695,465...28,779,953
Ensembl chr16:28,695,470...28,777,509 		JBrowse link
G FYN FYN proto-oncogene, Src family tyrosine kinase involved_in ISO PMID:18469807 UniProt PMID:18469807 RGD:8553892 NCBI chr 1:77,584,675...77,810,605
Ensembl chr 1:77,585,439...77,810,581 		JBrowse link
G GAS1 growth arrest specific 1 acts_upstream_of_or_within ISO (PMID:15070677) MGI PMID:15070677 NCBI chr10:28,509,168...28,511,554
Ensembl chr10:28,509,261...28,510,301 		JBrowse link
G GATA1 GATA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:42,898,431...42,905,939
Ensembl chr  X:42,898,442...42,905,976 		JBrowse link
G GDNF glial cell derived neurotrophic factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:22,936,602...22,965,929
Ensembl chr16:22,936,604...22,966,536 		JBrowse link
G GFRAL GDNF family receptor alpha like acts_upstream_of_or_within ISO (PMID:16086688) MGI PMID:16086688 NCBI chr 7:25,749,608...25,806,844
Ensembl chr 7:25,750,184...25,808,637 		JBrowse link
G IFI6 interferon alpha inducible protein 6 involved_in IEA
ISS
IBA		 Ensembl
HGNC
GO_Central
TreeGrafter		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:84,852,782...84,858,072
Ensembl chr 6:84,852,793...84,857,982 		JBrowse link
G IFI6 interferon, alpha-inducible protein 6 involved_in IEA TreeGrafter GO_REF:0000118
G IL7 interleukin 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8950980) Ensembl
MGI		 PMID:8950980 GO_REF:0000107 NCBI chr 4:57,677,895...57,744,713
Ensembl chr 4:57,684,796...57,744,709 		JBrowse link
G LOC100521447 serine/threonine-protein kinase Sgk3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:67,899,247...68,073,092
Ensembl chr 4:67,899,261...68,031,457 		JBrowse link
G LOC110258578 interleukin-1 beta-like involved_in ISO (PMID:10748004) BHF-UCL PMID:10748004
G MAP2K5 mitogen-activated protein kinase kinase 5 involved_in ISO PMID:20551324 BHF-UCL PMID:20551324 RGD:8553940 NCBI chr 1:165,458,263...165,733,452
Ensembl chr 1:165,458,258...165,740,297 		JBrowse link
G MAPK7 mitogen-activated protein kinase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:60,144,138...60,148,743
Ensembl chr12:60,144,136...60,158,739 		JBrowse link
G MCL1 MCL1 apoptosis regulator, BCL2 family member involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:98,562,092...98,567,014
Ensembl chr 4:98,534,812...98,567,006 		JBrowse link
G NRG1 neuregulin 1 involved_in ISO (PMID:9553078) BHF-UCL PMID:9553078 NCBI chr15:52,625,550...53,688,003
Ensembl chr15:52,630,679...52,839,505 		JBrowse link
G PRDX2 peroxiredoxin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9115640) Ensembl
MGI		 PMID:9115640 GO_REF:0000107 NCBI chr 2:66,207,829...66,211,474
Ensembl chr 2:66,207,828...66,212,009 		JBrowse link
G RIPK1 receptor interacting serine/threonine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:1,841,143...1,880,705
Ensembl chr 7:1,841,239...1,880,699 		JBrowse link
G SNAI2 snail family transcriptional repressor 2 acts_upstream_of_or_within ISO (PMID:10518215) MGI PMID:10518215 NCBI chr 4:79,264,880...79,268,475
Ensembl chr 4:79,264,880...79,268,475 		JBrowse link
G STRADB STE20 related adaptor beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12574163) Ensembl
MGI		 PMID:12574163 GO_REF:0000107 NCBI chr15:105,055,218...105,083,429
Ensembl chr15:105,055,274...105,126,927 		JBrowse link
G TERT telomerase reverse transcriptase involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:79,258,591...79,276,421
Ensembl chr16:79,258,591...79,276,421 		JBrowse link
G TNF tumor necrosis factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:23,699,635...23,702,393
Ensembl chr 7:23,699,628...23,702,416 		JBrowse link
G UNC5B unc-5 netrin receptor B involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:74,120,055...74,208,055
Ensembl chr14:74,120,050...74,205,263 		JBrowse link
G ZC3HC1 zinc finger C3HC-type containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12748172) Ensembl
MGI		 PMID:12748172 GO_REF:0000107 NCBI chr18:18,740,817...18,761,515
Ensembl chr18:18,740,845...18,761,718 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17806
    cellular process 16839
      signal transduction 6963
        signal transduction in absence of ligand 81
          extrinsic apoptotic signaling pathway in absence of ligand 79
            negative regulation of extrinsic apoptotic signaling pathway in absence of ligand 34
Path 2
Term Annotations click to browse term
  biological_process 17806
    biological regulation 12905
      regulation of biological process 12538
        signaling 7507
          signal transduction 6963
            regulation of signal transduction 3118
              negative regulation of signal transduction 1438
                negative regulation of apoptotic signaling pathway 261
                  negative regulation of extrinsic apoptotic signaling pathway 106
                    negative regulation of extrinsic apoptotic signaling pathway in absence of ligand 34
paths to the root