Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:seminiferous tubule development
go back to main search page
Accession:GO:0072520 term browser browse the term
Definition:The reproductive developmental process whose specific outcome is the progression of the seminiferous tubule over time, from its formation to the mature structure. Seminiferous tubules are ducts located in the testicles, and are the specific location of meiosis, and the subsequent creation of gametes, namely spermatozoa.


show annotations for term's descendants           Sort by:
seminiferous tubule development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrg1 adhesion G protein-coupled receptor G1 involved_in IEA
ISO		 GO_REF:0000107
(MGI:4847971|PMID:20981830)		 Ensembl
RGD		 PMID:20981830 GO_REF:0000107 MGI:4847971 NCBI chr19:10,003,963...10,041,122
Ensembl chr19:10,003,975...10,041,108 		JBrowse link
G Adrm1 ADRM1 26S proteasome ubiquitin receptor involved_in ISO (MGI:4849324|PMID:21048919) RGD PMID:21048919 MGI:4849324 NCBI chr 3:167,265,435...167,270,197
Ensembl chr 3:167,265,296...167,270,195 		JBrowse link
G Ar androgen receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1922269 (PMID:19574395), (PMID:21084446)		 Ensembl
RGD		 PMID:19574395 PMID:21084446 GO_REF:0000107 NCBI chr  X:63,104,771...63,273,934
Ensembl chr  X:63,104,771...63,273,925 		JBrowse link
G Atrx ATRX, chromatin remodeler involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3528480 (PMID:21427128)		 Ensembl
RGD		 PMID:21427128 GO_REF:0000107 NCBI chr  X:70,850,981...70,997,330
Ensembl chr  X:70,850,981...70,997,330 		JBrowse link
G Brip1 BRCA1 interacting helicase 1 acts_upstream_of_or_within ISO MGI:4129733 (PMID:26490168) RGD PMID:26490168 NCBI chr10:70,907,266...71,031,502
Ensembl chr10:70,907,371...71,030,324 		JBrowse link
G Fer FER tyrosine kinase IEP RGD PMID:12700184 RGD:2291909 NCBI chr 9:103,520,452...103,827,364
Ensembl chr 9:103,520,493...103,821,451 		JBrowse link
G Gata4 GATA binding protein 4 acts_upstream_of_or_within ISO MGI:3042214|MGI:3778685 (PMID:21172404) RGD PMID:21172404 NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636 		JBrowse link
G Ing2 inhibitor of growth family, member 2 involved_in ISO (MGI:4867787|PMID:21124965) RGD PMID:21124965 MGI:4867787 NCBI chr16:44,573,592...44,584,180
Ensembl chr16:44,575,597...44,583,482 		JBrowse link
G Inhbb inhibin subunit beta B IEP RGD PMID:2477225 RGD:9743933 NCBI chr13:30,530,860...30,536,566
Ensembl chr13:30,530,860...30,537,832 		JBrowse link
G Jmjd1c jumonji domain containing 1C acts_upstream_of_or_within ISO MGI:5544070 (PMID:24006281) RGD PMID:24006281 NCBI chr20:21,332,147...21,494,220
Ensembl chr20:21,332,147...21,463,122 		JBrowse link
G Kif18a kinesin family member 18A acts_upstream_of_or_within ISO MGI:5575486 (PMID:20981276) RGD PMID:20981276 NCBI chr 3:95,764,388...95,824,756
Ensembl chr 3:95,764,388...95,824,582 		JBrowse link
G Lhcgr luteinizing hormone/choriogonadotropin receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2181999 (PMID:11145748)		 Ensembl
RGD		 PMID:11145748 GO_REF:0000107 NCBI chr 6:5,661,871...5,728,109
Ensembl chr 6:5,661,871...5,724,521 		JBrowse link
G Rad21l1 RAD21 cohesin complex component like 1 acts_upstream_of_or_within ISO MGI:1929645 (PMID:22711701) RGD PMID:22711701 NCBI chr 3:140,160,128...140,188,324
Ensembl chr 3:140,160,118...140,188,298 		JBrowse link
G Rec8 REC8 meiotic recombination protein acts_upstream_of_or_within ISO MGI:3652039 (PMID:22711701) RGD PMID:22711701 NCBI chr15:29,109,862...29,117,327
Ensembl chr15:29,109,863...29,117,326 		JBrowse link
G Rnase10 ribonuclease A family member 10 acts_upstream_of_or_within ISO MGI:88064 (PMID:21084446) RGD PMID:21084446 NCBI chr15:24,226,687...24,229,149
Ensembl chr15:24,226,691...24,228,561 		JBrowse link
G Scaper S-phase cyclin A-associated protein in the ER acts_upstream_of_or_within ISO MGI:4455688 (PMID:32510560) RGD PMID:32510560 NCBI chr 8:55,932,717...56,332,222
Ensembl chr 8:55,933,306...56,332,122 		JBrowse link
G Smad4 SMAD family member 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2386394 (PMID:24739304)		 Ensembl
RGD		 PMID:24739304 GO_REF:0000107 NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438 		JBrowse link
G Spata2 spermatogenesis associated 2 acts_upstream_of_or_within ISO MGI:6093706 (PMID:29025062) RGD PMID:29025062 NCBI chr 3:156,202,962...156,213,283
Ensembl chr 3:156,202,967...156,211,705 		JBrowse link
G Spink2 serine peptidase inhibitor, Kazal type 2 acts_upstream_of_or_within ISO MGI:4966113 (PMID:21705336) RGD PMID:21705336 NCBI chr14:30,967,682...30,974,326
Ensembl chr14:30,967,714...30,974,326 		JBrowse link
G Tbc1d20 TBC1 domain family, member 20 acts_upstream_of_or_within ISO MGI:1856684 (PMID:24239381) RGD PMID:24239381 NCBI chr 3:140,768,537...140,787,010
Ensembl chr 3:140,768,537...140,785,121 		JBrowse link
G Ubb ubiquitin B acts_upstream_of_or_within ISO MGI:3774112 (PMID:18070917) RGD PMID:18070917 NCBI chr10:47,247,630...47,249,335
Ensembl chr10:47,245,637...47,249,333 		JBrowse link
G Wdr48 WD repeat domain 48 acts_upstream_of_or_within ISO MGI:3877670 (PMID:24001775) RGD PMID:24001775 NCBI chr 8:119,622,053...119,655,264
Ensembl chr 8:119,622,048...119,655,264 		JBrowse link
G Wt1 WT1 transcription factor acts_upstream_of_or_within ISO (PMID:16418481) RGD PMID:16418481 NCBI chr 3:91,566,540...91,613,653
Ensembl chr 3:91,567,001...91,613,643 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19692
    developmental process 6963
      anatomical structure development 6486
        reproductive structure development 430
          seminiferous tubule development 23
Path 2
Term Annotations click to browse term
  biological_process 19692
    developmental process 6963
      anatomical structure development 6486
        multicellular organism development 5239
          system development 4526
            reproductive system development 435
              reproductive structure development 430
                gonad development 338
                  male gonad development 207
                    seminiferous tubule development 23
paths to the root