Fer (FER tyrosine kinase) - Rat Genome Database

Name: Fer
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Fer (FER tyrosine kinase) Rattus norvegicus

Analyze

Symbol:

Fer

Name:

FER tyrosine kinase

RGD ID:

1306273

Description:

Predicted to enable several functions, including epidermal growth factor receptor binding activity; non-membrane spanning protein tyrosine kinase activity; and protein phosphatase 1 binding activity. Involved in adherens junction organization; germ cell development; and male gonad development. Located in adherens junction. Part of protein-containing complex. Orthologous to human FER (FER tyrosine kinase); PARTICIPATES IN N-cadherin signaling pathway; INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

c-FER; fer (fms/fps related) protein kinase, testis specific 2; fer (fms/fps related) protein kinase, testis specific 2 (predicted); fer (fps/fes related) tyrosine kinase; Fert2; Fert2_predicted; Flk; Flk_retired; LOC367326; p94-FER; proto-oncogene c-Fer; proto-oncogene tyrosine-protein kinase Fer; tyrosine protein kinase FLK; tyrosine-protein kinase Fer; tyrosine-protein kinase FLK

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	FER (FER tyrosine kinase)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Fer (FER tyrosine kinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Fer (FER tyrosine kinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	FER (FER tyrosine kinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	FER (FER tyrosine kinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Fer (FER tyrosine kinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	FER (FER tyrosine kinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	FER (FER tyrosine kinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Fer (FER tyrosine kinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	FER (FER tyrosine kinase)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Fer (FER tyrosine kinase)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	fer (fer (fps/fes related) tyrosine kinase)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	FER	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	F59A3.8	Alliance	DIOPT (Ensembl Compara\|InParanoid\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	K09B11.5	Alliance	DIOPT (Ensembl Compara\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	T06C10.3	Alliance	DIOPT (Ensembl Compara\|InParanoid\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	T25B9.4	Alliance	DIOPT (InParanoid\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	T25B9.5	Alliance	DIOPT (Ensembl Compara\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	W01B6.5	Alliance	DIOPT (Ensembl Compara\|InParanoid\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	Y52D5A.2	Alliance	DIOPT (Ensembl Compara\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	Y69E1A.3	Alliance	DIOPT (Ensembl Compara\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	frk-1	Alliance	DIOPT (Ensembl Compara\|OrthoInspector\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	kin-21	Alliance	DIOPT (Ensembl Compara\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	kin-24	Alliance	DIOPT (Ensembl Compara\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	kin-14	Alliance	DIOPT (Ensembl Compara\|OrthoInspector\|PANTHER)
Caenorhabditis elegans (roundworm):	Y116A8C.38	Alliance	DIOPT (Ensembl Compara\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	ZK622.1	Alliance	DIOPT (Ensembl Compara\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	Y116A8C.24	Alliance	DIOPT (Ensembl Compara\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	M176.9	Alliance	DIOPT (Ensembl Compara\|InParanoid\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	T21G5.1	Alliance	DIOPT (Ensembl Compara\|OrthoInspector\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	fer	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	110,967,317 - 111,274,315 (+)	NCBI		GRCr8
mRatBN7.2	9	103,520,452 - 103,827,364 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	103,520,493 - 103,821,451 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	9	111,932,827 - 112,227,703 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	117,046,130 - 117,352,990 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	115,398,721 - 115,693,616 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	111,557,804 - 111,868,583 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	111,597,037 - 111,862,670 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	9	111,103,930 - 111,410,627 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	9	102,645,929 - 102,861,698 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	9	102,805,652 - 102,969,235 (+)	NCBI
Celera	9	101,013,100 - 101,221,975 (+)	NCBI		Celera
Cytogenetic Map	9	q37	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Duane retraction syndrome (ISO)

familial adenomatous polyposis 1 (ISO)

Hereditary Neoplastic Syndromes (ISO)

Neurodevelopmental Disorders (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (EXP)

(-)-epigallocatechin 3-gallate (ISO)

17alpha-ethynylestradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

4,4'-diaminodiphenylmethane (ISO)

acetylsalicylic acid (ISO)

aflatoxin B1 (ISO)

ammonium chloride (EXP)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenite(3-) (ISO)

arsenous acid (ISO)

atrazine (EXP)

benzo[a]pyrene (ISO)

Benzo[k]fluoranthene (ISO)

bisphenol A (EXP,ISO)

cadmium dichloride (ISO)

caffeine (ISO)

carbamazepine (ISO)

carbon nanotube (ISO)

cisplatin (ISO)

crocidolite asbestos (ISO)

cyclosporin A (ISO)

diarsenic trioxide (ISO)

diclofenac (ISO)

dicrotophos (ISO)

dimethylarsinous acid (ISO)

dorsomorphin (ISO)

endosulfan (EXP)

FR900359 (ISO)

fulvestrant (ISO)

gentamycin (EXP)

glycidol (EXP)

glyphosate (EXP)

lead(0) (ISO)

methotrexate (ISO)

methyl methanesulfonate (ISO)

methylmercury chloride (ISO)

O-methyleugenol (ISO)

paracetamol (EXP)

phenylmercury acetate (ISO)

pirinixic acid (ISO)

potassium chromate (ISO)

resveratrol (ISO)

SB 431542 (ISO)

sunitinib (ISO)

tetrachloromethane (EXP,ISO)

thimerosal (ISO)

thioacetamide (EXP)

trichloroethene (EXP)

trichostatin A (ISO)

triphenyl phosphate (ISO)

troglitazone (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

actin cytoskeleton organization (ISO,ISS)

adherens junction assembly (IEP)

adherens junction disassembly (IEP)

cell adhesion (IBA,ISO)

cell-cell adhesion mediated by cadherin (ISO,ISS)

cellular response to macrophage colony-stimulating factor stimulus (ISO)

cellular response to reactive oxygen species (ISO,ISS)

chemotaxis (IBA,ISO)

cytokine-mediated signaling pathway (ISO,ISS)

diapedesis (ISO,ISS)

extracellular matrix-cell signaling (ISO,ISS)

Fc-epsilon receptor signaling pathway (IBA,ISO,ISS)

germ cell development (IEP)

insulin receptor signaling pathway (ISO,ISS)

interleukin-6-mediated signaling pathway (ISO)

Kit signaling pathway (ISO,ISS)

male gonad development (IEP)

microtubule cytoskeleton organization (ISO,ISS)

negative regulation of mast cell activation involved in immune response (ISO,ISS)

platelet-derived growth factor receptor signaling pathway (ISO,ISS)

positive regulation of actin filament polymerization (ISO,ISS)

positive regulation of cell migration (ISO,ISS)

positive regulation of cell population proliferation (ISO)

positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ISO)

regulation of epidermal growth factor receptor signaling pathway (ISO,ISS)

regulation of fibroblast migration (ISO)

regulation of lamellipodium assembly (ISO,ISS)

regulation of protein phosphorylation (ISO,ISS)

response to lipopolysaccharide (ISO,ISS)

response to platelet-derived growth factor (ISO,ISS)

seminiferous tubule development (IEP)

Sertoli cell development (IEP)

signal transduction (ISO)

substrate adhesion-dependent cell spreading (ISO,ISS)

Cellular Component

actin cytoskeleton (ISO,ISS)

adherens junction (IDA)

cell cortex (IEA)

cell junction (ISO,ISS)

chromatin (ISO,ISS)

cytoplasm (IEA,ISO,ISS)

cytoplasmic side of plasma membrane (ISO,ISS)

cytoskeleton (IEA)

cytosol (IEA,ISO)

lamellipodium (ISO,ISS)

microtubule cytoskeleton (ISO,ISS)

nucleus (ISO)

plasma membrane (IBA,IEA)

protein-containing complex (IDA)

Molecular Function

ATP binding (IEA)

epidermal growth factor receptor binding (ISO,ISS)

lipid binding (IEA,ISO,ISS)

non-membrane spanning protein tyrosine kinase activity (IEA,ISO,ISS)

protein binding (ISO)

protein kinase activity (ISO)

protein phosphatase 1 binding (ISO)

protein tyrosine kinase activity (IBA)

Molecular Pathway Annotations Click to see Annotation Detail View

N-cadherin signaling pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Fer kinase/FerT and adherens junction dynamics in the testis: an in vitro and in vivo study.	Chen YM, etal., Biol Reprod. 2003 Aug;69(2):656-72. Epub 2003 Apr 16.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
4.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
5.	GOA pipeline	RGD automated data pipeline
6.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:1990274	PMID:2485255	PMID:7623846	PMID:9722593	PMID:11006284	PMID:12192036	PMID:12972546	PMID:16009680	PMID:16176974	PMID:16731527	PMID:16732323	PMID:17606629
PMID:18985748	PMID:19047464	PMID:19147545	PMID:19738202	PMID:21518868	PMID:22223638	PMID:25540073

Genomics

Comparative Map Data

Fer
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	110,967,317 - 111,274,315 (+)	NCBI		GRCr8
mRatBN7.2	9	103,520,452 - 103,827,364 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	103,520,493 - 103,821,451 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	9	111,932,827 - 112,227,703 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	117,046,130 - 117,352,990 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	115,398,721 - 115,693,616 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	111,557,804 - 111,868,583 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	111,597,037 - 111,862,670 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	9	111,103,930 - 111,410,627 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	9	102,645,929 - 102,861,698 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	9	102,805,652 - 102,969,235 (+)	NCBI
Celera	9	101,013,100 - 101,221,975 (+)	NCBI		Celera
Cytogenetic Map	9	q37	NCBI

FER
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	108,747,897 - 109,196,841 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	108,747,841 - 109,196,841 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	5	108,083,598 - 108,532,542 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	108,111,422 - 108,551,272 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	5	108,111,421 - 108,551,272	NCBI
Celera	5	104,021,685 - 104,463,167 (+)	NCBI		Celera
Cytogenetic Map	5	q21.3	NCBI
HuRef	5	103,255,853 - 103,696,708 (+)	NCBI		HuRef
CHM1_1	5	107,516,662 - 107,956,463 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	5	109,250,514 - 109,700,301 (+)	NCBI		T2T-CHM13v2.0

Fer
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	17	64,136,945 - 64,453,515 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	17	64,170,057 - 64,446,491 (+)	Ensembl		GRCm39 Ensembl
GRCm38	17	63,862,073 - 64,146,519 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	17	63,863,062 - 64,139,496 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	17	64,245,367 - 64,488,845 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	17	63,581,484 - 63,824,640 (+)	NCBI		MGSCv36	mm8
Celera	17	68,237,664 - 68,455,526 (+)	NCBI		Celera
Cytogenetic Map	17	E1.1	NCBI
cM Map	17	33.06	NCBI

Fer
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955418	5,614,950 - 5,981,636 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955418	5,612,919 - 5,981,549 (-)	NCBI	ChiLan1.0	ChiLan1.0

FER
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	104,000,498 - 104,451,899 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	102,156,957 - 102,596,934 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	104,099,620 - 104,548,077 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	109,915,751 - 110,350,673 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	109,964,823 - 110,350,576 (+)	Ensembl	panpan1.1		panPan2

FER
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	3	2,863,804 - 3,295,999 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	3	2,867,726 - 3,295,999 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	3	4,272,340 - 4,700,462 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	3	2,756,396 - 3,188,729 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	3	2,758,188 - 3,187,807 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	3	2,707,992 - 3,136,116 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	3	2,735,868 - 3,165,523 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	3	2,872,292 - 3,307,139 (-)	NCBI		UU_Cfam_GSD_1.0

Fer
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	157,705,239 - 158,134,183 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936531	3,551,350 - 3,897,449 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936531	3,512,976 - 3,898,885 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

FER
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	113,774,412 - 114,206,930 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	113,774,120 - 114,207,307 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	118,230,513 - 118,512,081 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

FER
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	23	12,252,135 - 12,629,584 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	23	12,192,800 - 12,620,443 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666036	1,598,008 - 2,044,849 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Fer
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624743	26,694,465 - 27,091,250 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624743	26,663,440 - 27,097,771 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Fer
1596 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	904
Count of miRNA genes:	230
Interacting mature miRNAs:	266
Transcripts:	ENSRNOT00000021758, ENSRNOT00000056430
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1300134	Bp185	Blood pressure QTL 185	3.73		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	9	61381434	104821652	Rat
1354626	Bvd1	Brain ventricular dilatation QTL 1	3.73	0.001	brain ventricle morphology trait (VT:0000822)	hydrocephalus severity score (CMO:0001881)	9	75712843	111552878	Rat
7794784	Mcs31	Mammary carcinoma susceptibility QTL 31	2.98		mammary gland integrity trait (VT:0010552)	mammary tumor incidence/prevalence measurement (CMO:0000946)	9	77813894	111552878	Rat
731171	Glom6	Glomerulus QTL 6	2.8	0.0003	kidney glomerulus morphology trait (VT:0005325)	count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)	9	64573531	109573531	Rat
61385	Edpm9	Estrogen-dependent pituitary mass QTL 9	3.43	0.05	pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	9	63869687	108869687	Rat
724544	Uae9	Urinary albumin excretion QTL 9	4.5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	9	25268044	114175309	Rat

Markers in Region

D9Rat140

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	9	103,532,184 - 103,532,285 (+)	MAPPER	mRatBN7.2
Rnor_6.0	9	111,571,379 - 111,571,479	NCBI	Rnor6.0
Rnor_5.0	9	111,115,647 - 111,115,747	UniSTS	Rnor5.0
RGSC_v3.4	9	102,570,430 - 102,570,530	UniSTS	RGSC3.4
RGSC_v3.4	9	102,570,429 - 102,570,530	RGD	RGSC3.4
RGSC_v3.1	9	102,779,909 - 102,780,010	RGD
FHH x ACI Map	9	83.53	UniSTS
FHH x ACI Map	9	83.53	RGD
Cytogenetic Map	9	q37	UniSTS

AI010628

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	9	103,819,978 - 103,820,146 (+)	MAPPER	mRatBN7.2
Rnor_6.0	9	111,861,198 - 111,861,365	NCBI	Rnor6.0
Rnor_5.0	9	111,403,242 - 111,403,409	UniSTS	Rnor5.0
RGSC_v3.4	9	102,860,226 - 102,860,393	UniSTS	RGSC3.4
Celera	9	101,220,503 - 101,220,670	UniSTS
Cytogenetic Map	9	q37	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium		10	12	6	8	6	1	1	65	22	37	9	1
Low	3	33	45	35	11	35	7	10	9	13	4	2	7
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001106928	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001395758	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008767367	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008767370	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596383	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596384	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596386	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083433	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083436	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083438	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083439	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083440	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083441	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083442	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083443	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083444	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083445	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083446	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083447	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083448	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267046	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267047	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267048	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001839653	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005488882	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005488883	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005488884	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005488885	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005488886	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010054586	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473997	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000021758 ⟹ ENSRNOP00000021758

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	9	103,557,987 - 103,820,142 (+)	Ensembl
Rnor_6.0 Ensembl	9	111,597,037 - 111,861,366 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000056430 ⟹ ENSRNOP00000053268

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	9	103,608,388 - 103,821,451 (+)	Ensembl
Rnor_6.0 Ensembl	9	111,649,631 - 111,862,670 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000097737 ⟹ ENSRNOP00000090379

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	9	103,520,493 - 103,820,142 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000112759 ⟹ ENSRNOP00000095206

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	9	103,558,044 - 103,820,148 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000117309 ⟹ ENSRNOP00000077379

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	9	103,520,508 - 103,558,360 (+)	Ensembl

RefSeq Acc Id:

NM_001106928 ⟹ NP_001100398

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	111,055,349 - 111,268,402 (+)	NCBI
mRatBN7.2	9	103,608,388 - 103,821,451 (+)	NCBI
Rnor_6.0	9	111,649,631 - 111,862,670 (+)	NCBI
Rnor_5.0	9	111,103,930 - 111,410,627 (+)	NCBI
RGSC_v3.4	9	102,645,929 - 102,861,698 (+)	RGD
Celera	9	101,013,100 - 101,221,975 (+)	RGD

Sequence:

show sequence

GTACCGTTAATGGCCCCAGAGTCTGGCTGCTCTGTAGAGCTGGGACGTTTGGCTGACCACAGCG
GGCTCTAGCTGCTCAGCAGGGGGAGGTACTGCATTGTGCTTCTTCTGGGCCAAAAGCAGGCACT
TGAAGAGCTGAAACAGTCAGTCCAGCAATTGCGATGCACTGAGGCAAAGTGCGCAGCACAGAAA
GAATTGCTGGAGCAAAAAGTACAGGAAAATGATGGGAAAGAGCCACCTCCTGTGGTGAATTACG
AAGAAGATGCGCGGTCAGTCACATCTATGGTCCTATTAAGCTTATTTGTAAATGCAGAATAGAC
TTACCTGTCAGTCACCTCAGGTCACCTGGAGGGCACTTCAGCAGCCACCCATAGAGTCAGAAGA
CAAAAAGCTCTTCTCTTGCCTTCAAAACTGAAAGGACAGACTGAAGTTGTTTTTATCCCTGGGA
GACAGCAGGAAGACAGGATGATCTGTGGACACACTGACTTCTGCGTGCATACCGTTAGCTCTAG
TTAAGATTTGAGATGGAGCAGAGTGTGGAGTGTCCCCACTGTGAGGGTGACCTGGAGCCTGACT
CTGACTCCAAGTTCTGTAAAAAATGCTCTATACCGATGAGCCCTGGGCCTTCCTCATCAGAGAT
CCAGAGATACCAGGAAAGAAAGGAGAGGCTATCCAAATTTGAGTCTATTCGTCATTCAATTGCT
GGAATAATTAAGTCTCCAAAGTCGGTCCTCGGCTCTTCAACGCTCTCTGACGTGATCTCTGTGG
GTGAGAAGCCCCTGGCGGAGCATGACTGGTACCACGGTGCCATCCCCAGGATAGAGGCACAAGA
ACTGCTGAAGCAGCAGGGAGACTTCCTGGTGCGAGAGAGCCATGGGAAACCTGGTGAATATGTC
CTTTCTGTATATTCTGACGGACAAAGGAGGCACTTTATCATACAGTTTGTTGATAATCTATATC
GATTTGAGGGCACCGGCTTTTCAAATATCCCTCAACTTATAGATCACCACTTCAATACAAAGCA
AGTCATCACCAAGAAGTCGGGGGTGGTTCTGCTGAATCCTATTCCAAAGGATAAGAAATGGGTT
CTCAATCATGAAGATGTTTCATTGGGAGAATTACTGGGCAAGGGGAATTTTGGTGAGGTGTACA
AGGGCACACTGAAGGATAAAACCCCTGTTGCTGTTAAAACGTGCAAGGAAGACCTGCCTCAGGA
ACTAAAAATAAAGTTTTTACAGGAAGCCAAAATTCTCAAGCAATATGATCACCCCAATATTGTC
AAACTTATAGGCGTGTGCACACAAAGACAGCCTGTCTACATCATTATGGAACTGGTCCCAGGAG
GTGATTTTCTGTCCTTTCTGAGGAAGAGGAAGGACGAGCTAAAGTTGAAGCAGTTGGTGAGGTT
TTCCTTGGACGTTGCTGCTGGCATGCTGTATCTCGAGGGCAAGATCTGCATTCACAGGGACCTG
GCTGCACGGAACTGCCTGGTAGGTGAAAATAATACTCTGAAAATCAGTGACTTTGGGATGTCTC
GGCAAGAAGACGGTGGAGTGTATTCATCTTCTGGCTTAAAGCAGATTCCCATTAAGTGGACAGC
ACCAGAAGCACTGAATTATGGGAGATACAGCTCTGAAAGTGACGTGTGGAGCTTCGGCATCCTG
CTCTGGGAGACTTTCAGCCTGGGAGTCTGTCCGTACCCTGGGATGACAAACCAGCAAGCACGGG
AACAAGTGGAGAGAGGGTATCGGATGTCAGCCCCACAGAACTGTCCCGAGGAAATTTTTACAAT
CATGATGAAGTGCTGGGATTACAAGCCTGAAAACCGCCCTAAGTTCAGTGACCTTCACAAAGAG
CTCACGGCCATCAAGAAGAAAATCACATAGTGCCACCCAGGGCTAGACTCCACCTGCGGGACTC
TGTCCTCAGTCACCCTGACTTTATACCACCTTACTGCAACCATCTTTGAAGGTTATGTTTTTTA
TTAACTGGGTTTTTAAAGTATGTTCCACTTTAAATATGTTAAAGGCAAATTTATTCAAGAAATA
AATAGTCCTACCCAGGGCCGTATTAGCTAACCACAACAACCCTGCCATTTGATGCCCCTGTACA
GAGAAGAGCAAGGCCTCCCAGGAAGGTAAAAGATATCTTTAATACCGAAGAACATTGGTGTTCT
GCCAAAGTTTTCTACTCCGGGCACAGCCTCTGGGCTGCTGTCTTCTGCCGTCGGCCCTCCTCAG
TTGGTGCTATAAACAGCCTTGGTAGCCCATGTTTTGCACAACACGTGCCCACCACAGTTGGCTT
TCCACTCTGCCAAGGCAAGATTCTATCTATAAATAGAATCATATGTTGGGAATCGCTTGGACCT
CCTCGGGCTTCTCTCTTCTTTCCTGTGAGAACATCACACAACCATGTCGTTTGCCTTTCGCTTC
CCTCAGCCAGGCCACAGAAAATGGTGTGTGGAAAATTCCCAGAGAGCCCAGGGGACAGAGGTAG
TTGCTTCTGCGGAACAGTGCAGAGGACAGGGGTGACAAGGAGCATGTGTGACCAGGAGGGCAGG
TTGGGAAAAGAGCAGGTAGCCAGTGCTCACCAGGGAGAAGAAAGCAAGAGCGCCCCCTTCCTCC
CAGCTTTCCACCTTCACAGAACCCGTGTCTGGGTCTCGATTCACTAACAAGGTCTAAGAAAGTT
TTCAGGATTCATTGAGCCCATGCAAACTGTCTTAAAGACACTGAAGCCCACAGAAGAACAGCAT
GATTCTGGTTGTGTATCTTCATCCTAGGAGACAATCCCAGAATGGGATTCCCTTCACTTGTACC
AGTTTCTGGGTCTTCAGAATCCCTGATTCACATTTACAAACACATCCACCCATATCTACTGAAG
TGCAGGGCGGCTATGAATGAAATAGATGGGCCAGGCGCCAAGTCAGTGTTAATGAAGAAAATCT
ATAGGGATGCCCACATCTCCATTTCCTCTTCCCCCTAAAGCCACTCGCTGGAAATGTTACTGAG
AACGCAGCGGTATGCAAGCAGCCATTAAGGTGAAGGCAGGTAAGAGCAGGGTGTGGCTGAGCTG
CCTCTTAGCTGCCTCGGGGAACTTCCCATGGTCTGCGCAGTTGTCTCAGAACCAGTGTGGCCCA
GAGATGGTCTCCTCCCTTCCTGGCCGTGTAGAGCGTGGATCAGACTTTGAAGGAGGCAGCTGAA
GAGAGAAGGACTCTGTTCTATTATTTCAACCTCCTTGCTAATTTTATACACATTTAATGGTTCC
TACATGCAGGCTGAAATAAAGGCACACTGAGCCTGCCCGCAGCAGTACACTGCAGCACACAAAG
CAGCTCCCTCCTCCGCGGGCACAGCCCTCCCACGGGTCCGACCCTGTAAATAAGCAGAG

hide sequence

RefSeq Acc Id:

NM_001395758 ⟹ NP_001382687

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	110,967,463 - 111,274,315 (+)	NCBI
mRatBN7.2	9	103,520,497 - 103,827,364 (+)	NCBI

RefSeq Acc Id:

XM_008767367 ⟹ XP_008765589

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	110,974,307 - 111,274,315 (+)	NCBI
mRatBN7.2	9	103,527,342 - 103,827,364 (+)	NCBI
Rnor_6.0	9	111,566,509 - 111,868,583 (+)	NCBI

Sequence:

show sequence

ATTTTTTTTTTTTTTGCATGACTAAAAGCTTTCAGCAAGTAGATGTTGAGTGAATTAATAATTA
AGACAGTTATTCCGTGTGACATCATAGGAAGTGAGGATACCTTGCTTGCCATCCGATGCTAGCT
TGCTTTAGTTGTGTGTCTCTGGTGTGTCTGTTGAGGAAGGAAAGAAACCTGAAACGGGAGCCAG
TGAGATGGCTCAGTTGGTCAGAGGGCCTCAGCAGGTCTGCAGACCTGAGTTCACTCAGGGAAGC
TCCCTGCTGGCAGAAGAGTGCCTGCTTCCAAATTACTTTCTGACCTTGACCATTCTCTGTAGTG
TGTACAGTAATAAATGCTATGGTGCTGTAGTACAGCATACGCTGTTTTAAATTATACAAAAGAA
GTGTAAATGTTTAAATATCATCTTAAGTTATACCTTTTACTGCCTACCAGAATTCATTCAGAAG
CCTTCCTTGACACCACTGTATACTAATAACTGTAACTCACTTCACTTTGTCACTCACTGAGCTA
TACTTGTTTTGTGGCTACTGTGTCTCAGGTGTGGTGTGGAGGACTTAACAGTCTTAGGATGGAA
ACCCTTCCTTCAGTTACCCTTTTGTGGAGGAAGGGGATAACATGAAATTTTAAACCACATAGAG
GTTAGATTTCCAATCACATTAGCATGCCCAATCTAAAATGAAGTAAAATGTTTAGAGGCAATGA
AAGTATCTTTGGAAATTGGTAGATCCTTGGAAGAGTGGAAGACGTGGAGAATGTGACTGATAAA
AGCGGTCAGTTTCCTGACTGGAAGGGAAGCAGATGGTGCCGAGTGAAATGCCCTTGTGTTCCTA
TGAAGGTCAAGGGGAGTGGCAGAATACAGAATAGATATGTGCTGACTAACAGGCTCACGTGCAC
AGTGTGGAGGTCAAGCTGTATCTTACAAAATGGGATTTGGGAGTGACCTGAAGAACTCACAGGA
AGCTGTGCTAAAGCTGCAAGACTGGGAACTACGGCTGCTGGAGACAGTGAAGAAATTCATGGCT
CTGAGAATAAAAAGCGATAAAGAATATGCATACACGCTGCAGAACCTCTGTAATCAAGTTGATA
AAGACAGCACGGTGCAGGTGAATTACGTCAGCAACGTGTCCAAGTCTTGGCTACTGATGATTCA
GCAGACAGAGCAACTCAGTAGGATAATGAAGACCCATGCAGAGGACTTGAACTCTGGACCCTTG
CACAGGCTCACCATGATGATCAAGGACAAGCAGCAAGTGAAAAAGAGCTATGTAGGCATTCATC
AGCAGATAGAGGCCGAGATGATCAAGGTCACAAAGACAGAATTGGAGAAGTTGAAATCCAGCTA
TCGACAATTAATAAAAGAGATGAATTCTGCCAAAGAGAAATATAAAGAAGCCTTAGCCAAAGGG
AAGGAAACAGAAAAGGCCAAGGAGCGCTGTGACAAAGCCACAATGAAACTTCATATGCTGCATA
ACCAGTACGTGCTGGCCCTGAAGGGGGCGCAGCTCCACCAGAGCCAGTATTACGACACCACACT
TCCTCTGCTGCTGGACTCCGTGCAAAAGATGCAAGAAGAAATGATAAAAGCACTAAAAGGCATA
TTTGACGAGTATAGCGAGATAACCAGCCTTGTCACAGAGGAGATAGTGAATGTCCACAAGGAAA
TTCAAATGTCTGTTGACCAGATAGATCCTAGCACTGAGTATAATGACTTCATCGACGTCCACAG
AACAACAGCTGCTAAGGAGCAAGAAATCGAATTTGATACTTCCTTATTAGAAGAAAATGAAAAT
CTTCAGGCAAACGAGATCATGTGGAATAACTTAACAGCAGACAGTTTGCAAGTAATGCTGAAGA
CTTTAGCAGAAGAGCTCACACAGACCCAGCAGATGCTTTTACACAAGGAGGCGGCGGTCCTGGA
GCTAGAGAAGAGGATTGAGGAATCTTCTGAGACCTGCGCAAAGAAGTCTGACATTGTGCTTCTT
CTGGGCCAAAAGCAGGCACTTGAAGAGCTGAAACAGTCAGTCCAGCAATTGCGATGCACTGAGG
CAAAGTGCGCAGCACAGAAAGAATTGCTGGAGCAAAAAGTACAGGAAAATGATGGGAAAGAGCC
ACCTCCTGTGGTGAATTACGAAGAAGATGCGCGGTCAGTCACATCTATGGAAAGAAAGGAGAGG
CTATCCAAATTTGAGTCTATTCGTCATTCAATTGCTGGAATAATTAAGTCTCCAAAGTCGGTCC
TCGGCTCTTCAACGCAGCTCTCTGACGTGATCTCTGTGGGTGAGAAGCCCCTGGCGGAGCATGA
CTGGTACCACGGTGCCATCCCCAGGATAGAGGCACAAGAACTGCTGAAGCAGCAGGGAGACTTC
CTGGTGCGAGAGAGCCATGGGAAACCTGGTGAATATGTCCTTTCTGTATATTCTGACGGACAAA
GGAGGCACTTTATCATACAGTTTGTTGATAATCTATATCGATTTGAGGGCACCGGCTTTTCAAA
TATCCCTCAACTTATAGATCACCACTTCAATACAAAGCAAGTCATCACCAAGAAGTCGGGGGTG
GTTCTGCTGAATCCTATTCCAAAGGATAAGAAATGGGTTCTCAATCATGAAGATGTTTCATTGG
GAGAATTACTGGGCAAGGGGAATTTTGGTGAGGTGTACAAGGGCACACTGAAGGATAAAACCCC
TGTTGCTGTTAAAACGTGCAAGGAAGACCTGCCTCAGGAACTAAAAATAAAGTTTTTACAGGAA
GCCAAAATTCTCAAGCAATATGATCACCCCAATATTGTCAAACTTATAGGCGTGTGCACACAAA
GACAGCCTGTCTACATCATTATGGAACTGGTCCCAGGAGGTGATTTTCTGTCCTTTCTGAGGAA
GAGGAAGGACGAGCTAAAGTTGAAGCAGTTGGTGAGGTTTTCCTTGGACGTTGCTGCTGGCATG
CTGTATCTCGAGGGCAAGAACTGCATTCACAGGGACCTGGCTGCACGGAACTGCCTGGTAGGTG
AAAATAATACTCTGAAAATCAGTGACTTTGGGATGTCTCGGCAAGAAGACGGTGGAGTGTATTC
ATCTTCTGGCTTAAAGCAGATTCCCATTAAGTGGACAGCACCAGAAGCACTGAATTATGGGAGA
TACAGCTCTGAAAGTGACGTGTGGAGCTTCGGCATCCTGCTCTGGGAGACTTTCAGCCTGGGAG
TCTGTCCGTACCCTGGGATGACAAACCAGCAAGCACGGGAACAAGTGGAGAGAGGGTATCGGAT
GTCAGCCCCACAGAACTGTCCCGAGGAAATTTTTACAATCATGATGAAGTGCTGGGATTACAAG
CCTGAAAACCGCCCTAAGTTCAGTGACCTTCACAAAGAGCTCACGGCCATCAAGAAGAAAATCA
CATAGTGCCACCCAGGGCTAGACTCCACCTGCGGGACTCTGTCCTCAGTCACCCTGACTTTATA
CCACCTTACTGCAACCATCTTTGAAGGTTATGTTTTTTATTAACTGGGTTTTTAAAGTATGTTC
CACTTTAAATATGTTAAAGGCAAATTTATTCAAGAAATAAATAGTCCTACCCAGGGCCGTATTA
GCTAACCACAACAACCCTGCCATTTGATGCCCCTGTACAGAGAAGAGCAAGGCCTCCCAGGAAG
GTAAAAGATATCTTTAATACCGAAGAACATTGGTGTTCTGCCAAAGTTTTCTACTCCGGGCACA
GCCTCTGGGCTGCTGTCTTCTGCCGTCGGCCCTCCTCAGTTGGTGCTATAAACAGCCTTGGTAG
CCCATGTTTTGCACAACACGTGCCCACCACAGTTGGCTTTCCACTCTGCCAAGGCAAGATTCTA
TCTATAAATAGAATCATATGTTGGGAATCGCTTGGACCTCCTCGGGCTTCTCTCTTCTTTCCTG
TGAGAACATCACACAACCATGTCGTTTGCCTTTCGCTTCCCTCAGCCAGGCCACAGAAAATGGT
GTGTGGAAAATTCCCAGAGAGCCCAGGGGACAGAGGTAGTTGCTTCTGCGGAACAGTGCAGAGG
ACAGGGGTGACAAGGAGCATGTGTGACCAGGAGGGCAGGTTGGGAAAAGAGCAGGTAGCCAGTG
CTCACCAGGGAGAAGAAAGCAAGAGCGCCCCCTTCCTCCCAGCTTTCCACCTTCACAGAACCCG
TGTCTGGGTCTCGATTCACTAACAAGGTCTAAGAAAGTTTTCAGGATTCATTGAGCCCATGCAA
ACTGTCTTAAAGACACTGAAGCCCACAGAAGAACAGCATGATTCTGGTTGTGTATCTTCATCCT
AGGAGACAATCCCAGAATGGGATTCCCTTCACTTGTACCAGTTTCTGGGTCTTCAGAATCCCTG
ATTCACATTTACAAACACATCCACCCATATCTACTGAAGTGCAGGGCGGCTATGAATGAAATAG
ATGGGCCAGGCGCCAAGTCAGTGTTAATGAAGAAAATCTATAGGGATGCCCACATCTCCATTTC
CTCTTCCCCCTAAAGCCACTCGCTGGAAATGTTACTGAGAACGCAGCGGTATGCAAGCAGCCAT
TAAGGTGAAGGCAGGTAAGAGCAGGGTGTGGCTGAGCTGCCTCTTAGCTGCCTCGGGGAACTTC
CCATGGTCTGCGCAGTTGTCTCAGAACCAGTGTGGCCCAGAGATGGTCTCCTCCCTTCCTGGCC
GTGTAGAGCGTGGATCAGACTTTGAAGGAGGCAGCTGAAGAGAGAAGGACTCTGTTCTATTATT
TCAACCTCCTTGCTAATTTTATACACATTTAATGGTTCCTACATGCAGGCTGAAATAAAGGCAC
ACTGAGCCTGCCCGCAGCAGTACACTGCAGCACACAAAGCAGCTCCCTCCTCCGCGGGCACAGC
CCTCCCACGGGTCCGACCCTGTAAATAAGCAGAGGCCCTGATGGCACACGGCACGGCACCCCAA
GTGCAAACTCAGGCATTCATGTTGAAGTGTCCTGCTCTCCAGGCATCCGCCGGCCCTCAGAAAG
AGATAAGACATTGCCTCTCGGGAGCCAACTGAATCTGTCTATAATACACTCTGTCTATGAAAGG
GGAAGAAACAGCCTCTCACTGCTTAGCAGTGGATGCCCAGCAAGGGGCAGGAGGCCGGCTTGGC
TCTGACTCTGTGAACAGGACGAGAAAGGTAATCCCTGCATTCTGGGTACAGAGAACATGGCTGG
CGCTGACACTCACTCATCCAGGCTCTCAGAATTTGCAATTCACATCATAACTCTTGGCTTAAGT
TAAAAAGGCTTTTCAAAACATCATGACATCTGCAACATTTAAATTCTATTTTATTCTTTGTCCC
AGTGCAGGCAGAGGTATAGTTTAAGATTAACTCATCGGGAGCCTTTCAGGATCATGTCAGTCAT
ACAGAATATTAAATTTAACATAGGCACGTGCATTAAGAAAAGCTTATGCAAAACATTCTTACTG
TTAATTTTGTTACGCTTAAAGCATAATTTATTCATCCCTTCTGTCACTGATAATTATTGGAATT
ATGTACTTTAGGAGGCTAATCCATACCCAAAAAGTGCACATATAAATACAGTTCTGATTTGCAA
GTTGATTTAGGGAAGAGAGACTGCAGAAATGCACAAAAGTCTATGATGCCTTTACTTAAAAAAA
TAATAATCATAACCAGTGGCACCCCAGTAACACAGGTGTGGACGCCCCGAAGCCTGGCCACAGA
TCTTTATTTTACTAACAGATTAGCCAAGAGCGTTGGGGGCCTGCACTGAGCAGCGAGCGCTCCT
TCAGGTCAGCAGTCTGGGCACGCAGGAGAAGGCTGGTGAGCATGAGCGTCTGACTCCCAATGCA
GCGCCTACCTTGAGTCACCAGGAAACCTCCCTGAGAAATGGGAGGTCTGTTTGTTGGAGACAGC
AAACTTTTCTCCCACAGCCACATTCGATGTGGATTTTGTGTGACCTAAGCTTTCTTCTCAAAGC
CGTTTTCTTAGGAAAACGATAAAGAATTACTAGGCCTGTTTTCAGCCCATCCTGATATCAGGTC
CACAGGGGAAAGTCCCAAGTGATTCTTTTTCTTTTTTCCAAGACTTAACAGGGACAGTAGAGTC
AGTTCCCTTTTCATATCTGGCCACCTTCTCACGGATATCCCTTGTACAGCCTGGAGTCATTCAG
TGCGTGCTCACGGAGAAAACAGAACTTCCTACGACTAAGATTATGTTTGTTTCCTAAAACAACC
AAGTTTCCTTCTGTGTTGGCCTCTGTTGCCATCAGCTGGCTCCTCTGACATCACCACAGCACTG
TGGTGAGACGGCTGTCACACAAGCATTTCAGTGGCATTACGTGCCACACACCGGATTTGGGCAG
GGAGCAAGCAGGCACAGCAGGACAGATCTGTGCTGTGTGGCGTGACCCTCACATGCTCTCCAAG
TGTTCAGAACATCATTGTAATGTGCCGGGTCTGCAGCATCCTGTAGTCAGCCATGTGTCCTTGA
AGCAGAGTGACATCTAAGGGGCTGTCCGCCTGAGTCCTCTTCCTTTCACACCATTGGCATGATC
CCTGCCTCTTGTCAGTAGATGTGATTGTCACGGGTGATCTCCTTGGAGATCGGAGCCCTCATAC
AAAACAGCACCACTGCAGCTGAGGAAGGCGGAGAGAAAGCTCACGTGTGTGTCAACATCTTCAG
AAGGTGGAATCCAAGGTTTAATATGAAAAATGACTGTTAGAGTGGCATGAGAGTTTACTATGAA
AATAAAGCATTTCCTCTTGTTAACAGATTTACTATACCATTAGAAGGTTTTACTAGATTTTTAC
TTTACATTTTTCTGGGCTTATTAATTTCATGTCAAAAATGAATACTTTTTTGAGAACCCAAAAT
GTCATTTCTGTATAAGAAAAGACCCTGATTTAAAAGCCAGCAAGATCACCCTGCTAGGAGTTAC
TGAGACAGATTTAAGCTCCCATAATATGCCCCTTTGAACATCGTGTTCTAATACAGGTGGTTAA
TCAACTCTATATCCTCACCCTGAGTCAGTATGAGAAATGCCCCCCCCTCACCCCAGAAACTGTC
CCTCTGCCTTCCACTAATGCAAAGATGGCATTCAGGAATGGCATTGCTGTCACTCTGCTAACGT
GACAGATTTCTGGGAATAACCCTGCTGTGAAATAACTCATTACAGTGGCCAGGACTAGTGAGCT
GGGGCGCAGAGATCTGTCACTGAATTCCAGGTGGCCTGCAGAGAGCCAAAACAAGAAAGAACCA
GCTCCCTAAAGCATGTAGACAAAGTGGACGGAGACTGTCATTGTCATCAGGAGCCCTGAGGAAA
CCTCCAGGAGGCCAGACCCTTCCCCTGCAAAACCAGAAAGAGCATTCGTCCCAAAGAAACCACC
TCAATGCCAGGGCCTCTCCCTGAAGCAGGAGCCACTTGGCACTCCACCCAGGGCTGACACCATG
TGAGGTACCGGTCCCCTCACTGTCTTCTACCCAGTGAACACGTGGTCCCATGCGCTCAGTCTAG
GAGAGTAGCCAAAGCTTCTAGGTCTTGAGCTCATTCCTTAGGTGAAGGCCACAATGCTTCCCAT
CTCATTAGGACACTTTTATGCAGTAGAACAGGCCAGGGCTGACGTGTCCTAAATGAGAACATGC
TTGGGCTACCCTTGGCTAAATGGTTCCTACTGAGGGCCCTGCTGAGGGACCCTCCTGAGCAGCA
CTGGGCGCTGATGAGTTTGACTTTACCTAAGAAACATTCTGAGGTAGAGCACAGGACAGCAGGG
TGAGGGAGTGTGTATCCCACAAAGGGGTCCCAGGAAGGCAGCACTGAGAACACCAATGAGACCC
GGGGAAAAGCCCAAAAGCCCAGCCCAAAAGCCCAGTGAGCCAGCCTCGGGCTGTGGGAGGCCTG
CTACTGCCCAAGACAACACACCTCAAACCTCCAAGCAGTTGTTTGAAGGGATTGAGTTGACTGA
TGGGCGTGTGGTCCCTGCTGTCTCGGGAATGGCAAGAGTGCAGAGGGCGGGAAGCAAGCCTTTC
ATAAGCATGGGTAAACTGAGTAACAGCCTTCCTGTGTGTGAGCCGCCAGTGCTACAGGGAGAGG
CTGGGAATGTTTCTGAGTTTTACTCTATTAATGAAAAACTAACCGGCAGGTTTGGCTTCCTTAC
TAGCCTTGTAAGAATCCTCAAACAAGAATATTGAAGTCTCTTCTTGAATTTCAGAACTGTGCAC
CCAAACCAGTAAGATGCAACTGGAGTGCTCTGTAGCAGTTACAGACCTGCCACAGAGCATGTCC
CCTCGTATCTGCCATGTCTGGCCCAGGAGTGCTCAGGGGCACTATTCTCTGATCTTGTTTTTGC
CTTCTTGTTACTTTGTTGCTTTGCCATAACAGAAAGGCCTTCACCGTTGGCTTATAAACACAAG
AGTATCTTCTCAGGGGTTCGCACCCTACAGGGAATATGCAGACCCAAGAAGCCAGAGCATACAG
CCTGTGAGCCGAGCTGTATGCCCAGGTGCCACGTATGCTGAATGAGTATCTTTACCAGCAAGGC
ATTCGGACATTTAGGGACAGAAAGACTACTGCCCGTGGGCATGTCCATGTTGAAGATGTCCCTA
TTCTCTTGGGCTAGTAAGCTGACCTCTGCCTAAAGAAATGCTGGAATAATCTACTGTAAAGCCC
TGGGCATCCCATCTTCCCACATCAGTCTACAATAACCCACTTTGTATTCTCTGTACCCTTCTTA
AGAGCAGTATCTAAGTTATTCAATTTATGTCATGTTAAATGATTTTCCAAAGCCTCATGAGAGA
GGGCACTGTGAGGACCTGAATTCAAAGCCAGTCTACCTAAATAAATACCCCCAGGACACTGTGA
AAGCATCAACACTCCATGGTGGTTTCCCAATAGCCTCCTTCCTGGAAAACCAAACATCACTCCC
TTTCTTATTTGTTGGGAATTTCTATAGCATCAGAGTAAGTGAGAATGCTACGAGGAGATCCAAG
GCAGGTCCAGTAGTAACCTGCAGGGCACATCCAAACCCTGCCTCCTCTTCTCTTCATGTAGCAC
TGAGTGCCTGACAATCATTACAGGTGAGCCTGTCTTCCCGGAGGCCCAGGTCTCTAAGTGGCCT
ATGTTGGAACCTTCAGGGCTAAGAGAAGCAGACAGACGGATGTGGATGGATCCCTGTGTAAGGA
AACCATCTTTTTCAACTCACCATCTCATGCTTTTTCTTTTTTTAACCAAAACCACCTTACTTAA
GAATCTTCCTCTTACAAAGAATTTGGTGGGGAAAACTGCCAACTCATAAGAAATGCCAGACTAG
TGTGTGCACCCAGTGAGGCTGGAAACAAACTTGCTCCCCACCCGAGGATGGCTGCACTTTAATT
GGGTGTGGGGTGCTGTGGGTCCCCCTTCCATGCTAGTTATAGCTGCCCTCCTGGAGCAGCAATC
AGAAGACCAATCCTACGAAGGCACAGTCCCATCACCCCTTAGGTCCCAGGCCTTCCACATCCAC
AGGGCACAGTACGTGAGCACACCCAGCGGAGGCAGGTTTATTCAGTGTCAGTGAAACTGACTCC
CAGCTTCAGCAGGTTACTGCAGCTTCTTGAACAATCAAGGTGATCTGATCAGATCTAACATAAG
AAGCTCATCTGCTTCCAATTCATGACCAAAGTGGCCAGAGACTGAAAATACCCTTCCGTCTGCT
GGAATTTCCCCTCACTAACATGTCTGTTGTCCTGTGATAGTTCTCCATGTGGACAAAGTTCTTT
CGAGACCGTTCTGTTACATCCTCCTTAAACCACCCAGACTGCCTGTTGAATCAGCTTCTGTAGT
TAAACACCTAAAGACTATGTTTAAATGCCTGTAGGTTTTATGTTTGGTTTGGTTTTGTATATAA
ATGATTGTGCGGCTGGGGACCAGGGATGAACGATGGTACACATTCCGTTGTCTTTGCATTACGG
TTTGTGTGTAAGCTTTTTGTTTGGTCTGAGTGCTTTTGGTGAGTCCTCTAAAATGCTAAAACTC
CCCGAAAGCACAACCATGCGGCCACACAAGTTAAGGTCCCTGGAAGTAGAGGGAAATACAGGTG
AGCGCTCAGAGTCCCACAGGCTACTCCGACGTCCTCAGGAGTCAGGCCCACTGAGACAGAAACA
ACTGTCAACTGGTGCCCAGGCTGCCCGCCCACCATTCTCTGAGCGCAGGCCCACAGAGAGCGGG
TACAGAAATGATTTTCTGAGTCATTTCTCTGCTTGTCACTAGGAGGTGAGATCAGTGGTGAGAG
GAAGGGCCACCCTCAGTCACCAGTGGGCTAGGTGTGCCGTCTGTAATTAGCACTTTGAGCCAAG
CACCCCGGTGGCTCTCGGAGTTCCTCCAATGCCAATGGACGGTCATTTTAATGTCACATGAAAG
CACCTTTAATCTTTTGTTGTTATTATTTTAAAAGAATATATTTGTGAAGTGGATAAAAGAAACA
CTGGAAATAGGGTGCTTCTGAAAATGTCAAGCATAAAACATGGGAACAAGGTCCGTGGTGGTTT
CTCCGGCTTTGTCAACAACCCTAACAGTGGAGGAAGTGGCTGGTGGTCTGCCTCGGCCGACTGT
CTCAGATCTGTATTTAACACGTATTTATTTGTTAAATTCTACATTCAGAAGAAATACACTTTGA
ATTTTGGCTAATGTTATAGAACATACTGAAAATTGACTTCTATGTTTTTTTTTAGCACGGGTCC
ACCGTTTTTGTAAAATAAGGCCATTTTTGGACAGCCTTCTTCTAGGAGACCAATTACCATCCAT
TGGTCTGCAGAGCCTCTTTTTATTATGTCCTTGTAATAATGTAAAATATTGACAGCAAA

hide sequence

RefSeq Acc Id:

XM_039083433 ⟹ XP_038939361

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	110,967,317 - 111,274,315 (+)	NCBI
mRatBN7.2	9	103,520,453 - 103,827,364 (+)	NCBI

RefSeq Acc Id:

XM_039083436 ⟹ XP_038939364

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	111,035,049 - 111,274,315 (+)	NCBI
mRatBN7.2	9	103,587,997 - 103,827,364 (+)	NCBI

RefSeq Acc Id:

XM_039083438 ⟹ XP_038939366

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	111,059,377 - 111,274,315 (+)	NCBI
mRatBN7.2	9	103,612,417 - 103,827,364 (+)	NCBI

RefSeq Acc Id:

XM_039083439 ⟹ XP_038939367

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	111,059,377 - 111,274,315 (+)	NCBI
mRatBN7.2	9	103,612,417 - 103,827,364 (+)	NCBI

RefSeq Acc Id:

XM_039083440 ⟹ XP_038939368

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	111,059,377 - 111,274,315 (+)	NCBI
mRatBN7.2	9	103,612,417 - 103,827,364 (+)	NCBI

RefSeq Acc Id:

XM_039083441 ⟹ XP_038939369

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	111,054,979 - 111,274,315 (+)	NCBI
mRatBN7.2	9	103,607,948 - 103,827,364 (+)	NCBI

RefSeq Acc Id:

XM_039083442 ⟹ XP_038939370

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	111,054,979 - 111,274,315 (+)	NCBI
mRatBN7.2	9	103,607,948 - 103,827,364 (+)	NCBI

RefSeq Acc Id:

XM_039083443 ⟹ XP_038939371

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	111,059,377 - 111,274,315 (+)	NCBI
mRatBN7.2	9	103,612,417 - 103,827,364 (+)	NCBI

RefSeq Acc Id:

XM_039083444 ⟹ XP_038939372

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	111,059,377 - 111,274,315 (+)	NCBI
mRatBN7.2	9	103,612,417 - 103,827,364 (+)	NCBI

RefSeq Acc Id:

XM_039083445 ⟹ XP_038939373

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	110,967,317 - 111,059,520 (+)	NCBI
mRatBN7.2	9	103,520,452 - 103,612,560 (+)	NCBI

RefSeq Acc Id:

XM_039083446 ⟹ XP_038939374

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	110,967,317 - 111,075,251 (+)	NCBI
mRatBN7.2	9	103,520,452 - 103,627,474 (+)	NCBI

RefSeq Acc Id:

XM_039083447 ⟹ XP_038939375

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	110,967,317 - 111,075,438 (+)	NCBI
mRatBN7.2	9	103,520,452 - 103,628,477 (+)	NCBI

RefSeq Acc Id:

XM_039083448 ⟹ XP_038939376

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	110,967,317 - 111,075,288 (+)	NCBI
mRatBN7.2	9	103,520,452 - 103,628,328 (+)	NCBI

RefSeq Acc Id:

XM_063267046 ⟹ XP_063123116

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	110,967,317 - 111,274,315 (+)	NCBI

RefSeq Acc Id:

XM_063267047 ⟹ XP_063123117

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	110,967,317 - 111,199,591 (+)	NCBI

RefSeq Acc Id:

XM_063267048 ⟹ XP_063123118

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	111,055,020 - 111,274,315 (+)	NCBI

RefSeq Acc Id:

XR_005488882

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	110,967,317 - 111,154,455 (+)	NCBI
mRatBN7.2	9	103,520,452 - 103,707,498 (+)	NCBI

RefSeq Acc Id:

XR_005488883

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	110,967,317 - 111,075,251 (+)	NCBI
mRatBN7.2	9	103,520,452 - 103,627,476 (+)	NCBI

RefSeq Acc Id:

XR_005488884

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	110,967,317 - 111,075,407 (+)	NCBI
mRatBN7.2	9	103,520,452 - 103,628,447 (+)	NCBI

RefSeq Acc Id:

XR_005488885

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	110,967,317 - 111,075,383 (+)	NCBI
mRatBN7.2	9	103,520,452 - 103,628,421 (+)	NCBI

RefSeq Acc Id:

XR_005488886

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	110,967,317 - 111,075,391 (+)	NCBI
mRatBN7.2	9	103,520,452 - 103,628,429 (+)	NCBI

RefSeq Acc Id:

XR_010054586

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	110,967,317 - 111,095,943 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001100398	(Get FASTA)	NCBI Sequence Viewer
	NP_001382687	(Get FASTA)	NCBI Sequence Viewer
	XP_008765589	(Get FASTA)	NCBI Sequence Viewer
	XP_038939361	(Get FASTA)	NCBI Sequence Viewer
	XP_038939364	(Get FASTA)	NCBI Sequence Viewer
	XP_038939366	(Get FASTA)	NCBI Sequence Viewer
	XP_038939367	(Get FASTA)	NCBI Sequence Viewer
	XP_038939368	(Get FASTA)	NCBI Sequence Viewer
	XP_038939369	(Get FASTA)	NCBI Sequence Viewer
	XP_038939370	(Get FASTA)	NCBI Sequence Viewer
	XP_038939371	(Get FASTA)	NCBI Sequence Viewer
	XP_038939372	(Get FASTA)	NCBI Sequence Viewer
	XP_038939373	(Get FASTA)	NCBI Sequence Viewer
	XP_038939374	(Get FASTA)	NCBI Sequence Viewer
	XP_038939375	(Get FASTA)	NCBI Sequence Viewer
	XP_038939376	(Get FASTA)	NCBI Sequence Viewer
	XP_063123116	(Get FASTA)	NCBI Sequence Viewer
	XP_063123117	(Get FASTA)	NCBI Sequence Viewer
	XP_063123118	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL91830	(Get FASTA)	NCBI Sequence Viewer
	EDL91831	(Get FASTA)	NCBI Sequence Viewer
	EDL91832	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000021758.6
	ENSRNOP00000053268.2
	ENSRNOP00000077379.1
	ENSRNOP00000090379.1
	ENSRNOP00000095206.1
	ENSRNOP00055027310
	ENSRNOP00060001616
	ENSRNOP00065025665
GenBank Protein	P09760	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_001100398 ⟸ NM_001106928
- Peptide Label:	isoform 1
- UniProtKB:	A6JRA6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEQSVECPHCEGDLEPDSDSKFCKKCSIPMSPGPSSSEIQRYQERKERLSKFESIRHSIAGIIK SPKSVLGSSTLSDVISVGEKPLAEHDWYHGAIPRIEAQELLKQQGDFLVRESHGKPGEYVLSVY SDGQRRHFIIQFVDNLYRFEGTGFSNIPQLIDHHFNTKQVITKKSGVVLLNPIPKDKKWVLNHE DVSLGELLGKGNFGEVYKGTLKDKTPVAVKTCKEDLPQELKIKFLQEAKILKQYDHPNIVKLIG VCTQRQPVYIIMELVPGGDFLSFLRKRKDELKLKQLVRFSLDVAAGMLYLEGKICIHRDLAARN CLVGENNTLKISDFGMSRQEDGGVYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSFGILLWET FSLGVCPYPGMTNQQAREQVERGYRMSAPQNCPEEIFTIMMKCWDYKPENRPKFSDLHKELTAI KKKIT hide sequence

RefSeq Acc Id:	XP_008765589 ⟸ XM_008767367
- Peptide Label:	isoform X1
- UniProtKB:	P09760 (UniProtKB/Swiss-Prot), F1MA12 (UniProtKB/Swiss-Prot), A0A140TAC4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGFGSDLKNSQEAVLKLQDWELRLLETVKKFMALRIKSDKEYAYTLQNLCNQVDKDSTVQVNYV SNVSKSWLLMIQQTEQLSRIMKTHAEDLNSGPLHRLTMMIKDKQQVKKSYVGIHQQIEAEMIKV TKTELEKLKSSYRQLIKEMNSAKEKYKEALAKGKETEKAKERCDKATMKLHMLHNQYVLALKGA QLHQSQYYDTTLPLLLDSVQKMQEEMIKALKGIFDEYSEITSLVTEEIVNVHKEIQMSVDQIDP STEYNDFIDVHRTTAAKEQEIEFDTSLLEENENLQANEIMWNNLTADSLQVMLKTLAEELTQTQ QMLLHKEAAVLELEKRIEESSETCAKKSDIVLLLGQKQALEELKQSVQQLRCTEAKCAAQKELL EQKVQENDGKEPPPVVNYEEDARSVTSMERKERLSKFESIRHSIAGIIKSPKSVLGSSTQLSDV ISVGEKPLAEHDWYHGAIPRIEAQELLKQQGDFLVRESHGKPGEYVLSVYSDGQRRHFIIQFVD NLYRFEGTGFSNIPQLIDHHFNTKQVITKKSGVVLLNPIPKDKKWVLNHEDVSLGELLGKGNFG EVYKGTLKDKTPVAVKTCKEDLPQELKIKFLQEAKILKQYDHPNIVKLIGVCTQRQPVYIIMEL VPGGDFLSFLRKRKDELKLKQLVRFSLDVAAGMLYLEGKNCIHRDLAARNCLVGENNTLKISDF GMSRQEDGGVYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSFGILLWETFSLGVCPYPGMTNQ QAREQVERGYRMSAPQNCPEEIFTIMMKCWDYKPENRPKFSDLHKELTAIKKKIT hide sequence

Ensembl Acc Id:

ENSRNOP00000021758 ⟸ ENSRNOT00000021758

Ensembl Acc Id:

ENSRNOP00000053268 ⟸ ENSRNOT00000056430

RefSeq Acc Id:	XP_038939375 ⟸ XM_039083447
- Peptide Label:	isoform X10

RefSeq Acc Id:	XP_038939376 ⟸ XM_039083448
- Peptide Label:	isoform X11

RefSeq Acc Id:	XP_038939374 ⟸ XM_039083446
- Peptide Label:	isoform X9

RefSeq Acc Id:	XP_038939373 ⟸ XM_039083445
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_038939361 ⟸ XM_039083433
- Peptide Label:	isoform X2
- UniProtKB:	A0A140TAC4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038939364 ⟸ XM_039083436
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I6ANB7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038939369 ⟸ XM_039083441
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038939370 ⟸ XM_039083442
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038939367 ⟸ XM_039083439
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038939366 ⟸ XM_039083438
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038939372 ⟸ XM_039083444
- Peptide Label:	isoform X7
- UniProtKB:	F1LPI8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038939368 ⟸ XM_039083440
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038939371 ⟸ XM_039083443
- Peptide Label:	isoform X6

Ensembl Acc Id:

ENSRNOP00000090379 ⟸ ENSRNOT00000097737

Ensembl Acc Id:

ENSRNOP00000077379 ⟸ ENSRNOT00000117309

Ensembl Acc Id:

ENSRNOP00000095206 ⟸ ENSRNOT00000112759

RefSeq Acc Id:	NP_001382687 ⟸ NM_001395758
- Peptide Label:	isoform 2
- UniProtKB:	P09760 (UniProtKB/Swiss-Prot), F1MA12 (UniProtKB/Swiss-Prot), A0A140TAC4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063123116 ⟸ XM_063267046
- Peptide Label:	isoform X3
- UniProtKB:	A0A140TAC4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063123117 ⟸ XM_063267047
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_063123118 ⟸ XM_063267048
- Peptide Label:	isoform X12

Protein Domains

F-BAR FCH Protein kinase SH2

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-P09760-F1-model_v2	AlphaFold	P09760	1-823	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1306273	AgrOrtholog
BioCyc Gene	G2FUF-26520	BioCyc
Ensembl Genes	ENSRNOG00000015898	Ensembl, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ENSRNOG00055019698	UniProtKB/Swiss-Prot
	ENSRNOG00060001617	UniProtKB/Swiss-Prot
	ENSRNOG00065019079	UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000021758.8	UniProtKB/TrEMBL
	ENSRNOT00000056430.3	UniProtKB/TrEMBL
	ENSRNOT00000097737.1	UniProtKB/Swiss-Prot
	ENSRNOT00000112759.1	UniProtKB/TrEMBL
	ENSRNOT00000117309.1	UniProtKB/TrEMBL
	ENSRNOT00055033660	UniProtKB/Swiss-Prot
	ENSRNOT00060002493	UniProtKB/Swiss-Prot
	ENSRNOT00065032154	UniProtKB/Swiss-Prot
Gene3D-CATH	1.20.1270.60	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	3.30.505.10	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	HR1 repeat	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Transferase(Phosphotransferase) domain 1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	AH/BAR_dom_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	F_BAR	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	FCH_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Fer_F-BAR	UniProtKB/Swiss-Prot
	Fes/Fps/Fer_SH2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Kinase-like_dom_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Prot_kinase_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Protein_kinase_ATP_BS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Ser-Thr/Tyr_kinase_cat_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SH2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SH2_dom_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Tyr-prot_kinase_Fes/Fps	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Tyr_kinase_AS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Tyr_kinase_cat_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	rno:301737	UniProtKB/TrEMBL
NCBI Gene	Fer	ENTREZGENE
PANTHER	PTHR24418:SF227	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	TYROSINE-PROTEIN KINASE	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	FCH	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Pkinase_Tyr	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SH2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Fer	PhenoGen
PIRSF	TyrPK_fps	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PRINTS	SH2DOMAIN	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	TYRKINASE	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE	F_BAR	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PROTEIN_KINASE_ATP	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PROTEIN_KINASE_DOM	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PROTEIN_KINASE_TYR	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SH2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000015898	RatGTEx
	ENSRNOG00055019698	RatGTEx
	ENSRNOG00060001617	RatGTEx
	ENSRNOG00065019079	RatGTEx
SMART	FCH	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SH2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	TyrKc	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF103657	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SSF55550	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SSF56112	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A140TAC4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5Y5R1_RAT	UniProtKB/TrEMBL
	A0A8I6ANB7	ENTREZGENE, UniProtKB/TrEMBL
	A6JRA6	ENTREZGENE, UniProtKB/TrEMBL
	F1LPI8	ENTREZGENE, UniProtKB/TrEMBL
	F1MA12	ENTREZGENE
	FER_RAT	UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary	F1MA12	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-01-27	Fer	FER tyrosine kinase	Fer	fer (fps/fes related) tyrosine kinase	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2014-07-09	Fer	fer (fps/fes related) tyrosine kinase	Fert2	fer (fms/fps related) protein kinase, testis specific 2	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2007-02-07	Fert2	fer (fms/fps related) protein kinase, testis specific 2	Fert2_predicted	fer (fms/fps related) protein kinase, testis specific 2 (predicted)	Symbol and Name updated	1299863	APPROVED
2007-02-07	Fert2_predicted	fer (fms/fps related) protein kinase, testis specific 2 (predicted)	Flk_retired	tyrosine protein kinase FLK	Data merged from RGD:1597165	737654	APPROVED
2007-02-07	Flk_retired		Flk	tyrosine protein kinase FLK	Symbol withdrawn	1299863	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Annotations - PID (archival)

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Imported Disease Annotations - ClinVar

Imported Annotations - PID (archival)