Fer (FER tyrosine kinase) - Rat Genome Database

Name: Fer
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: Fer (FER tyrosine kinase) Rattus norvegicus

Analyze

Symbol:

Fer

Name:

FER tyrosine kinase

RGD ID:

1306273

Description:

Enables several functions, including delta-catenin binding activity; enzyme binding activity; and gamma-catenin binding activity. Involved in Sertoli cell development; adherens junction organization; and germ cell development. Located in type III intermediate filament. Orthologous to human FER (FER tyrosine kinase); PARTICIPATES IN N-cadherin signaling pathway; INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

c-FER; fer (fms/fps related) protein kinase, testis specific 2; fer (fps/fes related) tyrosine kinase; Fert2; Flk; Flk_retired; LOC367326; p94-FER; proto-oncogene c-Fer; proto-oncogene tyrosine-protein kinase Fer; tyrosine protein kinase FLK; tyrosine-protein kinase Fer; tyrosine-protein kinase FLK

RGD Orthologs

Human

Mouse

Chinchilla

Bonobo

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	FER (FER tyrosine kinase)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Fer (fer (fms/fps related) protein kinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Fer (FER tyrosine kinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	FER (FER tyrosine kinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	FER (FER tyrosine kinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Fer (FER tyrosine kinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	FER (FER tyrosine kinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	FER (FER tyrosine kinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Fer (FER tyrosine kinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	FES (FES proto-oncogene, tyrosine kinase)	HGNC	OrthoDB
Alliance orthologs ³
Homo sapiens (human):	FER (FER tyrosine kinase)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Fer (fer (fms/fps related) protein kinase)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	fer (fer (fps/fes related) tyrosine kinase)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	FER	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	F59A3.8	Alliance	DIOPT (Ensembl Compara\|InParanoid\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	K09B11.5	Alliance	DIOPT (Ensembl Compara\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	T06C10.3	Alliance	DIOPT (Ensembl Compara\|InParanoid\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	T25B9.4	Alliance	DIOPT (InParanoid\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	T25B9.5	Alliance	DIOPT (Ensembl Compara\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	W01B6.5	Alliance	DIOPT (Ensembl Compara\|InParanoid\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	Y52D5A.2	Alliance	DIOPT (Ensembl Compara\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	Y69E1A.3	Alliance	DIOPT (Ensembl Compara\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	frk-1	Alliance	DIOPT (Ensembl Compara\|OrthoInspector\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	kin-21	Alliance	DIOPT (Ensembl Compara\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	kin-24	Alliance	DIOPT (Ensembl Compara\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	kin-14	Alliance	DIOPT (Ensembl Compara\|OrthoInspector\|PANTHER)
Caenorhabditis elegans (roundworm):	Y116A8C.38	Alliance	DIOPT (Ensembl Compara\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	ZK622.1	Alliance	DIOPT (Ensembl Compara\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	Y116A8C.24	Alliance	DIOPT (Ensembl Compara\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	M176.9	Alliance	DIOPT (Ensembl Compara\|InParanoid\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	T21G5.1	Alliance	DIOPT (Ensembl Compara\|OrthoInspector\|PANTHER)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	9	103,520,452 - 103,827,364 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	103,520,493 - 103,821,451 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	9	111,932,827 - 112,227,703 (+)	NCBI	Rnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0	9	117,046,130 - 117,352,990 (+)	NCBI	Rnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0	9	115,398,721 - 115,693,616 (+)	NCBI	Rnor_WKY
Rnor_6.0	9	111,557,804 - 111,868,583 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	111,597,037 - 111,862,670 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	9	111,103,930 - 111,410,627 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	9	102,645,929 - 102,861,698 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	9	102,805,652 - 102,969,235 (+)	NCBI
Celera	9	101,013,100 - 101,221,975 (+)	NCBI		Celera
Cytogenetic Map	9	q37	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

familial adenomatous polyposis 1 (ISO)

Hereditary Neoplastic Syndromes (ISO)

Neurodevelopmental Disorders (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (EXP)

(-)-epigallocatechin 3-gallate (ISO)

17alpha-ethynylestradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

4,4'-diaminodiphenylmethane (ISO)

acetylsalicylic acid (ISO)

aflatoxin B1 (ISO)

ammonium chloride (EXP)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenite(3-) (ISO)

arsenous acid (ISO)

atrazine (EXP)

benzo[a]pyrene (ISO)

Benzo[k]fluoranthene (ISO)

bisphenol A (EXP,ISO)

cadmium dichloride (ISO)

caffeine (ISO)

carbamazepine (ISO)

carbon nanotube (ISO)

cisplatin (ISO)

crocidolite asbestos (ISO)

cyclosporin A (ISO)

diarsenic trioxide (ISO)

diclofenac (ISO)

dicrotophos (ISO)

dorsomorphin (ISO)

endosulfan (EXP)

fulvestrant (ISO)

gentamycin (EXP)

glycidol (EXP)

lead(0) (ISO)

lead(2+) (ISO)

methotrexate (ISO)

methyl methanesulfonate (ISO)

methylmercury chloride (ISO)

O-methyleugenol (ISO)

paracetamol (EXP)

phenylmercury acetate (ISO)

pirinixic acid (ISO)

potassium chromate (ISO)

resveratrol (ISO)

SB 431542 (ISO)

sunitinib (ISO)

tetrachloromethane (EXP,ISO)

thimerosal (ISO)

thioacetamide (EXP)

trichloroethene (EXP)

trichostatin A (ISO)

troglitazone (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

actin cytoskeleton reorganization (ISO,ISS)

adherens junction assembly (IEP)

adherens junction disassembly (IEP)

cell adhesion (IBA,ISO)

cell differentiation (IBA)

cell-cell adhesion mediated by cadherin (ISO,ISS)

cellular response to insulin stimulus (ISO,ISS)

cellular response to macrophage colony-stimulating factor stimulus (ISO)

cellular response to reactive oxygen species (ISO,ISS)

chemotaxis (IBA,ISO)

cytokine-mediated signaling pathway (ISO,ISS)

diapedesis (ISO,ISS)

extracellular matrix-cell signaling (ISO,ISS)

Fc-epsilon receptor signaling pathway (IBA,ISO,ISS)

germ cell development (IEP)

innate immune response (IBA)

insulin receptor signaling pathway via phosphatidylinositol 3-kinase (ISO,ISS)

interleukin-6-mediated signaling pathway (ISO)

Kit signaling pathway (ISO,ISS)

male gonad development (IEP)

microtubule cytoskeleton organization (ISO,ISS)

negative regulation of mast cell activation involved in immune response (ISO,ISS)

peptidyl-tyrosine phosphorylation (IEA,ISO,ISS)

platelet-derived growth factor receptor signaling pathway (ISO,ISS)

positive regulation of actin filament polymerization (ISO,ISS)

positive regulation of cell migration (ISO,ISS)

positive regulation of cell population proliferation (ISO)

positive regulation of NF-kappaB transcription factor activity (ISO,ISS)

protein autophosphorylation (ISO)

protein phosphorylation (ISO)

regulation of epidermal growth factor receptor signaling pathway (ISO,ISS)

regulation of fibroblast migration (ISO)

regulation of lamellipodium assembly (ISO,ISS)

regulation of mast cell degranulation (IBA)

regulation of protein phosphorylation (ISO,ISS)

response to lipopolysaccharide (ISO,ISS)

response to platelet-derived growth factor (ISO,ISS)

Sertoli cell development (IEP)

signal transduction (ISO)

substrate adhesion-dependent cell spreading (ISO,ISS)

transmembrane receptor protein tyrosine kinase signaling pathway (IBA)

tyrosine phosphorylation of STAT protein (ISO)

Cellular Component

actin cytoskeleton (ISO,ISS)

anchoring junction (IEA)

cell cortex (IEA)

cell junction (ISO,ISS)

chromatin (ISO,ISS)

cytoplasm (IEA,ISO,ISS)

cytoskeleton (IEA)

cytosol (IEA,ISO)

extrinsic component of cytoplasmic side of plasma membrane (IBA,ISO,ISS)

lamellipodium (ISO,ISS)

microtubule cytoskeleton (ISO,ISS)

nucleus (ISO)

plasma membrane (IEA)

type III intermediate filament (IPI)

Molecular Function

actin binding (IDA)

ATP binding (IEA)

cadherin binding (IPI)

cytoskeletal protein binding (IPI)

delta-catenin binding (IPI)

epidermal growth factor receptor binding (ISO,ISS)

gamma-catenin binding (IPI)

lipid binding (IEA,ISO,ISS)

non-membrane spanning protein tyrosine kinase activity (IBA,IEA,ISO,ISS)

protein binding (ISO)

protein kinase activity (ISO)

protein kinase binding (IPI)

protein phosphatase 1 binding (ISO)

protein tyrosine kinase activity (IBA,IEA)

protein tyrosine kinase binding (IPI)

signaling receptor binding (IBA)

small GTPase binding (IPI)

Molecular Pathway Annotations Click to see Annotation Detail View

N-cadherin signaling pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Fer kinase/FerT and adherens junction dynamics in the testis: an in vitro and in vivo study.	Chen YM, etal., Biol Reprod. 2003 Aug;69(2):656-72. Epub 2003 Apr 16.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
4.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
5.	GOA pipeline	RGD automated data pipeline
6.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:1990274	PMID:2485255	PMID:7623846	PMID:9722593	PMID:11006284	PMID:12192036	PMID:12972546	PMID:16009680	PMID:16176974	PMID:16731527	PMID:16732323	PMID:17606629
PMID:18985748	PMID:19047464	PMID:19147545	PMID:19738202	PMID:21518868	PMID:22223638	PMID:25540073

Genomics

Comparative Map Data

Fer
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	9	103,520,452 - 103,827,364 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	103,520,493 - 103,821,451 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	9	111,932,827 - 112,227,703 (+)	NCBI	Rnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0	9	117,046,130 - 117,352,990 (+)	NCBI	Rnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0	9	115,398,721 - 115,693,616 (+)	NCBI	Rnor_WKY
Rnor_6.0	9	111,557,804 - 111,868,583 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	111,597,037 - 111,862,670 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	9	111,103,930 - 111,410,627 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	9	102,645,929 - 102,861,698 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	9	102,805,652 - 102,969,235 (+)	NCBI
Celera	9	101,013,100 - 101,221,975 (+)	NCBI		Celera
Cytogenetic Map	9	q37	NCBI

FER
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	108,747,897 - 109,196,841 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p13 Ensembl	5	108,747,841 - 109,196,841 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	5	108,083,598 - 108,532,542 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	108,111,422 - 108,551,272 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	5	108,111,421 - 108,551,272	NCBI
Celera	5	104,021,685 - 104,463,167 (+)	NCBI		Celera
Cytogenetic Map	5	q21.3	NCBI
HuRef	5	103,255,853 - 103,696,708 (+)	NCBI		HuRef
CHM1_1	5	107,516,662 - 107,956,463 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	5	109,250,514 - 109,700,301 (+)	NCBI		T2T-CHM13v2.0

Fer
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	17	64,136,945 - 64,453,515 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	17	64,170,057 - 64,446,491 (+)	Ensembl		GRCm39 Ensembl
GRCm38	17	63,862,073 - 64,146,519 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	17	63,863,062 - 64,139,496 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	17	64,245,367 - 64,488,845 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	17	63,581,484 - 63,824,640 (+)	NCBI		MGSCv36	mm8
Celera	17	68,237,664 - 68,455,526 (+)	NCBI		Celera
Cytogenetic Map	17	E1.1	NCBI

Fer
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955418	5,614,950 - 5,981,636 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955418	5,612,919 - 5,981,549 (-)	NCBI	ChiLan1.0	ChiLan1.0

FER
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	5	109,915,751 - 110,350,673 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	109,964,823 - 110,350,576 (+)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	5	104,099,620 - 104,548,077 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3

FER
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	3	2,863,804 - 3,295,999 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	3	2,867,726 - 3,295,999 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	3	4,272,340 - 4,700,462 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	3	2,756,396 - 3,188,729 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	3	2,758,188 - 3,187,807 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	3	2,707,992 - 3,136,116 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	3	2,735,868 - 3,165,523 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	3	2,872,292 - 3,307,139 (-)	NCBI		UU_Cfam_GSD_1.0

Fer
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	157,705,239 - 158,134,183 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936531	3,551,350 - 3,897,449 (+)	Ensembl	SpeTri2.0
SpeTri2.0	NW_004936531	3,512,976 - 3,898,885 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

FER
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	113,774,412 - 114,206,930 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	113,774,120 - 114,207,307 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	118,230,513 - 118,512,081 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

FER
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	23	12,252,135 - 12,629,584 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	23	12,192,800 - 12,620,443 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666036	1,598,008 - 2,044,849 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Fer
(Heterocephalus glaber - naked mole-rat)

Naked Mole-rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624743	26,694,465 - 27,091,250 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624743	26,663,440 - 27,097,771 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Fer
1445 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	904
Count of miRNA genes:	230
Interacting mature miRNAs:	266
Transcripts:	ENSRNOT00000021758, ENSRNOT00000056430
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
724544	Uae9	Urinary albumin excretion QTL 9	4.5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	9	25268044	114175309	Rat
1300134	Bp185	Blood pressure QTL 185	3.73		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	9	61381434	104821652	Rat
61385	Edpm9	Estrogen-dependent pituitary mass QTL 9	3.43	0.05	pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	9	63869687	108869687	Rat
731171	Glom6	Glomerulus QTL 6	2.8	0.0003	kidney glomerulus morphology trait (VT:0005325)	count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)	9	64573531	109573531	Rat
1354626	Bvd1	Brain ventricular dilatation QTL 1	3.73	0.001	brain ventricle morphology trait (VT:0000822)	hydrocephalus severity score (CMO:0001881)	9	75712843	111552878	Rat
7794784	Mcs31	Mammary carcinoma susceptibility QTL 31	2.98		mammary gland integrity trait (VT:0010552)	mammary tumor incidence/prevalence measurement (CMO:0000946)	9	77813894	111552878	Rat

Markers in Region

D9Rat140

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	9	103,532,184 - 103,532,285 (+)	MAPPER	mRatBN7.2
Rnor_6.0	9	111,571,379 - 111,571,479	NCBI	Rnor6.0
Rnor_5.0	9	111,115,647 - 111,115,747	UniSTS	Rnor5.0
RGSC_v3.4	9	102,570,430 - 102,570,530	UniSTS	RGSC3.4
RGSC_v3.4	9	102,570,429 - 102,570,530	RGD	RGSC3.4
RGSC_v3.1	9	102,779,909 - 102,780,010	RGD
FHH x ACI Map	9	83.53	UniSTS
FHH x ACI Map	9	83.53	RGD
Cytogenetic Map	9	q37	UniSTS

AI010628

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	9	103,819,978 - 103,820,146 (+)	MAPPER	mRatBN7.2
Rnor_6.0	9	111,861,198 - 111,861,365	NCBI	Rnor6.0
Rnor_5.0	9	111,403,242 - 111,403,409	UniSTS	Rnor5.0
RGSC_v3.4	9	102,860,226 - 102,860,393	UniSTS	RGSC3.4
Celera	9	101,220,503 - 101,220,670	UniSTS
Cytogenetic Map	9	q37	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium		10	12	6	8	6	1	1	65	22	37	9	1
Low	3	33	45	35	11	35	7	10	9	13	4	2	7
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001106928	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001395758	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008767367	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008767370	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596383	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596384	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596385	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596386	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083431	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083432	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083433	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083434	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083435	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083436	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083438	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083439	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083440	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083441	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083442	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083443	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083444	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083445	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083446	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083447	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083448	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001839653	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005488881	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005488882	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005488883	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005488884	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005488885	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005488886	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473997	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JACYVU010000215	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSRNOT00000021758 ⟹ ENSRNOP00000021758

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	9	103,557,987 - 103,820,142 (+)	Ensembl
Rnor_6.0 Ensembl	9	111,597,037 - 111,861,366 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000056430 ⟹ ENSRNOP00000053268

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	9	103,608,388 - 103,821,451 (+)	Ensembl
Rnor_6.0 Ensembl	9	111,649,631 - 111,862,670 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000097737 ⟹ ENSRNOP00000090379

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	9	103,520,493 - 103,820,142 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000112759 ⟹ ENSRNOP00000095206

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	9	103,558,044 - 103,820,148 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000117309 ⟹ ENSRNOP00000077379

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	9	103,520,508 - 103,558,360 (+)	Ensembl

RefSeq Acc Id:

NM_001106928 ⟹ NP_001100398

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	103,608,388 - 103,821,451 (+)	NCBI
Rnor_6.0	9	111,649,631 - 111,862,670 (+)	NCBI
Rnor_5.0	9	111,103,930 - 111,410,627 (+)	NCBI
RGSC_v3.4	9	102,645,929 - 102,861,698 (+)	RGD
Celera	9	101,013,100 - 101,221,975 (+)	RGD

Sequence:

show sequence

GTACCGTTAATGGCCCCAGAGTCTGGCTGCTCTGTAGAGCTGGGACGTTTGGCTGACCACAGCG
GGCTCTAGCTGCTCAGCAGGGGGAGGTACTGCATTGTGCTTCTTCTGGGCCAAAAGCAGGCACT
TGAAGAGCTGAAACAGTCAGTCCAGCAATTGCGATGCACTGAGGCAAAGTGCGCAGCACAGAAA
GAATTGCTGGAGCAAAAAGTACAGGAAAATGATGGGAAAGAGCCACCTCCTGTGGTGAATTACG
AAGAAGATGCGCGGTCAGTCACATCTATGGTCCTATTAAGCTTATTTGTAAATGCAGAATAGAC
TTACCTGTCAGTCACCTCAGGTCACCTGGAGGGCACTTCAGCAGCCACCCATAGAGTCAGAAGA
CAAAAAGCTCTTCTCTTGCCTTCAAAACTGAAAGGACAGACTGAAGTTGTTTTTATCCCTGGGA
GACAGCAGGAAGACAGGATGATCTGTGGACACACTGACTTCTGCGTGCATACCGTTAGCTCTAG
TTAAGATTTGAGATGGAGCAGAGTGTGGAGTGTCCCCACTGTGAGGGTGACCTGGAGCCTGACT
CTGACTCCAAGTTCTGTAAAAAATGCTCTATACCGATGAGCCCTGGGCCTTCCTCATCAGAGAT
CCAGAGATACCAGGAAAGAAAGGAGAGGCTATCCAAATTTGAGTCTATTCGTCATTCAATTGCT
GGAATAATTAAGTCTCCAAAGTCGGTCCTCGGCTCTTCAACGCTCTCTGACGTGATCTCTGTGG
GTGAGAAGCCCCTGGCGGAGCATGACTGGTACCACGGTGCCATCCCCAGGATAGAGGCACAAGA
ACTGCTGAAGCAGCAGGGAGACTTCCTGGTGCGAGAGAGCCATGGGAAACCTGGTGAATATGTC
CTTTCTGTATATTCTGACGGACAAAGGAGGCACTTTATCATACAGTTTGTTGATAATCTATATC
GATTTGAGGGCACCGGCTTTTCAAATATCCCTCAACTTATAGATCACCACTTCAATACAAAGCA
AGTCATCACCAAGAAGTCGGGGGTGGTTCTGCTGAATCCTATTCCAAAGGATAAGAAATGGGTT
CTCAATCATGAAGATGTTTCATTGGGAGAATTACTGGGCAAGGGGAATTTTGGTGAGGTGTACA
AGGGCACACTGAAGGATAAAACCCCTGTTGCTGTTAAAACGTGCAAGGAAGACCTGCCTCAGGA
ACTAAAAATAAAGTTTTTACAGGAAGCCAAAATTCTCAAGCAATATGATCACCCCAATATTGTC
AAACTTATAGGCGTGTGCACACAAAGACAGCCTGTCTACATCATTATGGAACTGGTCCCAGGAG
GTGATTTTCTGTCCTTTCTGAGGAAGAGGAAGGACGAGCTAAAGTTGAAGCAGTTGGTGAGGTT
TTCCTTGGACGTTGCTGCTGGCATGCTGTATCTCGAGGGCAAGATCTGCATTCACAGGGACCTG
GCTGCACGGAACTGCCTGGTAGGTGAAAATAATACTCTGAAAATCAGTGACTTTGGGATGTCTC
GGCAAGAAGACGGTGGAGTGTATTCATCTTCTGGCTTAAAGCAGATTCCCATTAAGTGGACAGC
ACCAGAAGCACTGAATTATGGGAGATACAGCTCTGAAAGTGACGTGTGGAGCTTCGGCATCCTG
CTCTGGGAGACTTTCAGCCTGGGAGTCTGTCCGTACCCTGGGATGACAAACCAGCAAGCACGGG
AACAAGTGGAGAGAGGGTATCGGATGTCAGCCCCACAGAACTGTCCCGAGGAAATTTTTACAAT
CATGATGAAGTGCTGGGATTACAAGCCTGAAAACCGCCCTAAGTTCAGTGACCTTCACAAAGAG
CTCACGGCCATCAAGAAGAAAATCACATAGTGCCACCCAGGGCTAGACTCCACCTGCGGGACTC
TGTCCTCAGTCACCCTGACTTTATACCACCTTACTGCAACCATCTTTGAAGGTTATGTTTTTTA
TTAACTGGGTTTTTAAAGTATGTTCCACTTTAAATATGTTAAAGGCAAATTTATTCAAGAAATA
AATAGTCCTACCCAGGGCCGTATTAGCTAACCACAACAACCCTGCCATTTGATGCCCCTGTACA
GAGAAGAGCAAGGCCTCCCAGGAAGGTAAAAGATATCTTTAATACCGAAGAACATTGGTGTTCT
GCCAAAGTTTTCTACTCCGGGCACAGCCTCTGGGCTGCTGTCTTCTGCCGTCGGCCCTCCTCAG
TTGGTGCTATAAACAGCCTTGGTAGCCCATGTTTTGCACAACACGTGCCCACCACAGTTGGCTT
TCCACTCTGCCAAGGCAAGATTCTATCTATAAATAGAATCATATGTTGGGAATCGCTTGGACCT
CCTCGGGCTTCTCTCTTCTTTCCTGTGAGAACATCACACAACCATGTCGTTTGCCTTTCGCTTC
CCTCAGCCAGGCCACAGAAAATGGTGTGTGGAAAATTCCCAGAGAGCCCAGGGGACAGAGGTAG
TTGCTTCTGCGGAACAGTGCAGAGGACAGGGGTGACAAGGAGCATGTGTGACCAGGAGGGCAGG
TTGGGAAAAGAGCAGGTAGCCAGTGCTCACCAGGGAGAAGAAAGCAAGAGCGCCCCCTTCCTCC
CAGCTTTCCACCTTCACAGAACCCGTGTCTGGGTCTCGATTCACTAACAAGGTCTAAGAAAGTT
TTCAGGATTCATTGAGCCCATGCAAACTGTCTTAAAGACACTGAAGCCCACAGAAGAACAGCAT
GATTCTGGTTGTGTATCTTCATCCTAGGAGACAATCCCAGAATGGGATTCCCTTCACTTGTACC
AGTTTCTGGGTCTTCAGAATCCCTGATTCACATTTACAAACACATCCACCCATATCTACTGAAG
TGCAGGGCGGCTATGAATGAAATAGATGGGCCAGGCGCCAAGTCAGTGTTAATGAAGAAAATCT
ATAGGGATGCCCACATCTCCATTTCCTCTTCCCCCTAAAGCCACTCGCTGGAAATGTTACTGAG
AACGCAGCGGTATGCAAGCAGCCATTAAGGTGAAGGCAGGTAAGAGCAGGGTGTGGCTGAGCTG
CCTCTTAGCTGCCTCGGGGAACTTCCCATGGTCTGCGCAGTTGTCTCAGAACCAGTGTGGCCCA
GAGATGGTCTCCTCCCTTCCTGGCCGTGTAGAGCGTGGATCAGACTTTGAAGGAGGCAGCTGAA
GAGAGAAGGACTCTGTTCTATTATTTCAACCTCCTTGCTAATTTTATACACATTTAATGGTTCC
TACATGCAGGCTGAAATAAAGGCACACTGAGCCTGCCCGCAGCAGTACACTGCAGCACACAAAG
CAGCTCCCTCCTCCGCGGGCACAGCCCTCCCACGGGTCCGACCCTGTAAATAAGCAGAG

hide sequence

RefSeq Acc Id:

XM_008767367 ⟹ XP_008765589

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	103,527,342 - 103,827,364 (+)	NCBI
Rnor_6.0	9	111,566,509 - 111,868,583 (+)	NCBI

Sequence:

show sequence

ATTTTTTTTTTTTTTGCATGACTAAAAGCTTTCAGCAAGTAGATGTTGAGTGAATTAATAATTA
AGACAGTTATTCCGTGTGACATCATAGGAAGTGAGGATACCTTGCTTGCCATCCGATGCTAGCT
TGCTTTAGTTGTGTGTCTCTGGTGTGTCTGTTGAGGAAGGAAAGAAACCTGAAACGGGAGCCAG
TGAGATGGCTCAGTTGGTCAGAGGGCCTCAGCAGGTCTGCAGACCTGAGTTCACTCAGGGAAGC
TCCCTGCTGGCAGAAGAGTGCCTGCTTCCAAATTACTTTCTGACCTTGACCATTCTCTGTAGTG
TGTACAGTAATAAATGCTATGGTGCTGTAGTACAGCATACGCTGTTTTAAATTATACAAAAGAA
GTGTAAATGTTTAAATATCATCTTAAGTTATACCTTTTACTGCCTACCAGAATTCATTCAGAAG
CCTTCCTTGACACCACTGTATACTAATAACTGTAACTCACTTCACTTTGTCACTCACTGAGCTA
TACTTGTTTTGTGGCTACTGTGTCTCAGGTGTGGTGTGGAGGACTTAACAGTCTTAGGATGGAA
ACCCTTCCTTCAGTTACCCTTTTGTGGAGGAAGGGGATAACATGAAATTTTAAACCACATAGAG
GTTAGATTTCCAATCACATTAGCATGCCCAATCTAAAATGAAGTAAAATGTTTAGAGGCAATGA
AAGTATCTTTGGAAATTGGTAGATCCTTGGAAGAGTGGAAGACGTGGAGAATGTGACTGATAAA
AGCGGTCAGTTTCCTGACTGGAAGGGAAGCAGATGGTGCCGAGTGAAATGCCCTTGTGTTCCTA
TGAAGGTCAAGGGGAGTGGCAGAATACAGAATAGATATGTGCTGACTAACAGGCTCACGTGCAC
AGTGTGGAGGTCAAGCTGTATCTTACAAAATGGGATTTGGGAGTGACCTGAAGAACTCACAGGA
AGCTGTGCTAAAGCTGCAAGACTGGGAACTACGGCTGCTGGAGACAGTGAAGAAATTCATGGCT
CTGAGAATAAAAAGCGATAAAGAATATGCATACACGCTGCAGAACCTCTGTAATCAAGTTGATA
AAGACAGCACGGTGCAGGTGAATTACGTCAGCAACGTGTCCAAGTCTTGGCTACTGATGATTCA
GCAGACAGAGCAACTCAGTAGGATAATGAAGACCCATGCAGAGGACTTGAACTCTGGACCCTTG
CACAGGCTCACCATGATGATCAAGGACAAGCAGCAAGTGAAAAAGAGCTATGTAGGCATTCATC
AGCAGATAGAGGCCGAGATGATCAAGGTCACAAAGACAGAATTGGAGAAGTTGAAATCCAGCTA
TCGACAATTAATAAAAGAGATGAATTCTGCCAAAGAGAAATATAAAGAAGCCTTAGCCAAAGGG
AAGGAAACAGAAAAGGCCAAGGAGCGCTGTGACAAAGCCACAATGAAACTTCATATGCTGCATA
ACCAGTACGTGCTGGCCCTGAAGGGGGCGCAGCTCCACCAGAGCCAGTATTACGACACCACACT
TCCTCTGCTGCTGGACTCCGTGCAAAAGATGCAAGAAGAAATGATAAAAGCACTAAAAGGCATA
TTTGACGAGTATAGCGAGATAACCAGCCTTGTCACAGAGGAGATAGTGAATGTCCACAAGGAAA
TTCAAATGTCTGTTGACCAGATAGATCCTAGCACTGAGTATAATGACTTCATCGACGTCCACAG
AACAACAGCTGCTAAGGAGCAAGAAATCGAATTTGATACTTCCTTATTAGAAGAAAATGAAAAT
CTTCAGGCAAACGAGATCATGTGGAATAACTTAACAGCAGACAGTTTGCAAGTAATGCTGAAGA
CTTTAGCAGAAGAGCTCACACAGACCCAGCAGATGCTTTTACACAAGGAGGCGGCGGTCCTGGA
GCTAGAGAAGAGGATTGAGGAATCTTCTGAGACCTGCGCAAAGAAGTCTGACATTGTGCTTCTT
CTGGGCCAAAAGCAGGCACTTGAAGAGCTGAAACAGTCAGTCCAGCAATTGCGATGCACTGAGG
CAAAGTGCGCAGCACAGAAAGAATTGCTGGAGCAAAAAGTACAGGAAAATGATGGGAAAGAGCC
ACCTCCTGTGGTGAATTACGAAGAAGATGCGCGGTCAGTCACATCTATGGAAAGAAAGGAGAGG
CTATCCAAATTTGAGTCTATTCGTCATTCAATTGCTGGAATAATTAAGTCTCCAAAGTCGGTCC
TCGGCTCTTCAACGCAGCTCTCTGACGTGATCTCTGTGGGTGAGAAGCCCCTGGCGGAGCATGA
CTGGTACCACGGTGCCATCCCCAGGATAGAGGCACAAGAACTGCTGAAGCAGCAGGGAGACTTC
CTGGTGCGAGAGAGCCATGGGAAACCTGGTGAATATGTCCTTTCTGTATATTCTGACGGACAAA
GGAGGCACTTTATCATACAGTTTGTTGATAATCTATATCGATTTGAGGGCACCGGCTTTTCAAA
TATCCCTCAACTTATAGATCACCACTTCAATACAAAGCAAGTCATCACCAAGAAGTCGGGGGTG
GTTCTGCTGAATCCTATTCCAAAGGATAAGAAATGGGTTCTCAATCATGAAGATGTTTCATTGG
GAGAATTACTGGGCAAGGGGAATTTTGGTGAGGTGTACAAGGGCACACTGAAGGATAAAACCCC
TGTTGCTGTTAAAACGTGCAAGGAAGACCTGCCTCAGGAACTAAAAATAAAGTTTTTACAGGAA
GCCAAAATTCTCAAGCAATATGATCACCCCAATATTGTCAAACTTATAGGCGTGTGCACACAAA
GACAGCCTGTCTACATCATTATGGAACTGGTCCCAGGAGGTGATTTTCTGTCCTTTCTGAGGAA
GAGGAAGGACGAGCTAAAGTTGAAGCAGTTGGTGAGGTTTTCCTTGGACGTTGCTGCTGGCATG
CTGTATCTCGAGGGCAAGAACTGCATTCACAGGGACCTGGCTGCACGGAACTGCCTGGTAGGTG
AAAATAATACTCTGAAAATCAGTGACTTTGGGATGTCTCGGCAAGAAGACGGTGGAGTGTATTC
ATCTTCTGGCTTAAAGCAGATTCCCATTAAGTGGACAGCACCAGAAGCACTGAATTATGGGAGA
TACAGCTCTGAAAGTGACGTGTGGAGCTTCGGCATCCTGCTCTGGGAGACTTTCAGCCTGGGAG
TCTGTCCGTACCCTGGGATGACAAACCAGCAAGCACGGGAACAAGTGGAGAGAGGGTATCGGAT
GTCAGCCCCACAGAACTGTCCCGAGGAAATTTTTACAATCATGATGAAGTGCTGGGATTACAAG
CCTGAAAACCGCCCTAAGTTCAGTGACCTTCACAAAGAGCTCACGGCCATCAAGAAGAAAATCA
CATAGTGCCACCCAGGGCTAGACTCCACCTGCGGGACTCTGTCCTCAGTCACCCTGACTTTATA
CCACCTTACTGCAACCATCTTTGAAGGTTATGTTTTTTATTAACTGGGTTTTTAAAGTATGTTC
CACTTTAAATATGTTAAAGGCAAATTTATTCAAGAAATAAATAGTCCTACCCAGGGCCGTATTA
GCTAACCACAACAACCCTGCCATTTGATGCCCCTGTACAGAGAAGAGCAAGGCCTCCCAGGAAG
GTAAAAGATATCTTTAATACCGAAGAACATTGGTGTTCTGCCAAAGTTTTCTACTCCGGGCACA
GCCTCTGGGCTGCTGTCTTCTGCCGTCGGCCCTCCTCAGTTGGTGCTATAAACAGCCTTGGTAG
CCCATGTTTTGCACAACACGTGCCCACCACAGTTGGCTTTCCACTCTGCCAAGGCAAGATTCTA
TCTATAAATAGAATCATATGTTGGGAATCGCTTGGACCTCCTCGGGCTTCTCTCTTCTTTCCTG
TGAGAACATCACACAACCATGTCGTTTGCCTTTCGCTTCCCTCAGCCAGGCCACAGAAAATGGT
GTGTGGAAAATTCCCAGAGAGCCCAGGGGACAGAGGTAGTTGCTTCTGCGGAACAGTGCAGAGG
ACAGGGGTGACAAGGAGCATGTGTGACCAGGAGGGCAGGTTGGGAAAAGAGCAGGTAGCCAGTG
CTCACCAGGGAGAAGAAAGCAAGAGCGCCCCCTTCCTCCCAGCTTTCCACCTTCACAGAACCCG
TGTCTGGGTCTCGATTCACTAACAAGGTCTAAGAAAGTTTTCAGGATTCATTGAGCCCATGCAA
ACTGTCTTAAAGACACTGAAGCCCACAGAAGAACAGCATGATTCTGGTTGTGTATCTTCATCCT
AGGAGACAATCCCAGAATGGGATTCCCTTCACTTGTACCAGTTTCTGGGTCTTCAGAATCCCTG
ATTCACATTTACAAACACATCCACCCATATCTACTGAAGTGCAGGGCGGCTATGAATGAAATAG
ATGGGCCAGGCGCCAAGTCAGTGTTAATGAAGAAAATCTATAGGGATGCCCACATCTCCATTTC
CTCTTCCCCCTAAAGCCACTCGCTGGAAATGTTACTGAGAACGCAGCGGTATGCAAGCAGCCAT
TAAGGTGAAGGCAGGTAAGAGCAGGGTGTGGCTGAGCTGCCTCTTAGCTGCCTCGGGGAACTTC
CCATGGTCTGCGCAGTTGTCTCAGAACCAGTGTGGCCCAGAGATGGTCTCCTCCCTTCCTGGCC
GTGTAGAGCGTGGATCAGACTTTGAAGGAGGCAGCTGAAGAGAGAAGGACTCTGTTCTATTATT
TCAACCTCCTTGCTAATTTTATACACATTTAATGGTTCCTACATGCAGGCTGAAATAAAGGCAC
ACTGAGCCTGCCCGCAGCAGTACACTGCAGCACACAAAGCAGCTCCCTCCTCCGCGGGCACAGC
CCTCCCACGGGTCCGACCCTGTAAATAAGCAGAGGCCCTGATGGCACACGGCACGGCACCCCAA
GTGCAAACTCAGGCATTCATGTTGAAGTGTCCTGCTCTCCAGGCATCCGCCGGCCCTCAGAAAG
AGATAAGACATTGCCTCTCGGGAGCCAACTGAATCTGTCTATAATACACTCTGTCTATGAAAGG
GGAAGAAACAGCCTCTCACTGCTTAGCAGTGGATGCCCAGCAAGGGGCAGGAGGCCGGCTTGGC
TCTGACTCTGTGAACAGGACGAGAAAGGTAATCCCTGCATTCTGGGTACAGAGAACATGGCTGG
CGCTGACACTCACTCATCCAGGCTCTCAGAATTTGCAATTCACATCATAACTCTTGGCTTAAGT
TAAAAAGGCTTTTCAAAACATCATGACATCTGCAACATTTAAATTCTATTTTATTCTTTGTCCC
AGTGCAGGCAGAGGTATAGTTTAAGATTAACTCATCGGGAGCCTTTCAGGATCATGTCAGTCAT
ACAGAATATTAAATTTAACATAGGCACGTGCATTAAGAAAAGCTTATGCAAAACATTCTTACTG
TTAATTTTGTTACGCTTAAAGCATAATTTATTCATCCCTTCTGTCACTGATAATTATTGGAATT
ATGTACTTTAGGAGGCTAATCCATACCCAAAAAGTGCACATATAAATACAGTTCTGATTTGCAA
GTTGATTTAGGGAAGAGAGACTGCAGAAATGCACAAAAGTCTATGATGCCTTTACTTAAAAAAA
TAATAATCATAACCAGTGGCACCCCAGTAACACAGGTGTGGACGCCCCGAAGCCTGGCCACAGA
TCTTTATTTTACTAACAGATTAGCCAAGAGCGTTGGGGGCCTGCACTGAGCAGCGAGCGCTCCT
TCAGGTCAGCAGTCTGGGCACGCAGGAGAAGGCTGGTGAGCATGAGCGTCTGACTCCCAATGCA
GCGCCTACCTTGAGTCACCAGGAAACCTCCCTGAGAAATGGGAGGTCTGTTTGTTGGAGACAGC
AAACTTTTCTCCCACAGCCACATTCGATGTGGATTTTGTGTGACCTAAGCTTTCTTCTCAAAGC
CGTTTTCTTAGGAAAACGATAAAGAATTACTAGGCCTGTTTTCAGCCCATCCTGATATCAGGTC
CACAGGGGAAAGTCCCAAGTGATTCTTTTTCTTTTTTCCAAGACTTAACAGGGACAGTAGAGTC
AGTTCCCTTTTCATATCTGGCCACCTTCTCACGGATATCCCTTGTACAGCCTGGAGTCATTCAG
TGCGTGCTCACGGAGAAAACAGAACTTCCTACGACTAAGATTATGTTTGTTTCCTAAAACAACC
AAGTTTCCTTCTGTGTTGGCCTCTGTTGCCATCAGCTGGCTCCTCTGACATCACCACAGCACTG
TGGTGAGACGGCTGTCACACAAGCATTTCAGTGGCATTACGTGCCACACACCGGATTTGGGCAG
GGAGCAAGCAGGCACAGCAGGACAGATCTGTGCTGTGTGGCGTGACCCTCACATGCTCTCCAAG
TGTTCAGAACATCATTGTAATGTGCCGGGTCTGCAGCATCCTGTAGTCAGCCATGTGTCCTTGA
AGCAGAGTGACATCTAAGGGGCTGTCCGCCTGAGTCCTCTTCCTTTCACACCATTGGCATGATC
CCTGCCTCTTGTCAGTAGATGTGATTGTCACGGGTGATCTCCTTGGAGATCGGAGCCCTCATAC
AAAACAGCACCACTGCAGCTGAGGAAGGCGGAGAGAAAGCTCACGTGTGTGTCAACATCTTCAG
AAGGTGGAATCCAAGGTTTAATATGAAAAATGACTGTTAGAGTGGCATGAGAGTTTACTATGAA
AATAAAGCATTTCCTCTTGTTAACAGATTTACTATACCATTAGAAGGTTTTACTAGATTTTTAC
TTTACATTTTTCTGGGCTTATTAATTTCATGTCAAAAATGAATACTTTTTTGAGAACCCAAAAT
GTCATTTCTGTATAAGAAAAGACCCTGATTTAAAAGCCAGCAAGATCACCCTGCTAGGAGTTAC
TGAGACAGATTTAAGCTCCCATAATATGCCCCTTTGAACATCGTGTTCTAATACAGGTGGTTAA
TCAACTCTATATCCTCACCCTGAGTCAGTATGAGAAATGCCCCCCCCTCACCCCAGAAACTGTC
CCTCTGCCTTCCACTAATGCAAAGATGGCATTCAGGAATGGCATTGCTGTCACTCTGCTAACGT
GACAGATTTCTGGGAATAACCCTGCTGTGAAATAACTCATTACAGTGGCCAGGACTAGTGAGCT
GGGGCGCAGAGATCTGTCACTGAATTCCAGGTGGCCTGCAGAGAGCCAAAACAAGAAAGAACCA
GCTCCCTAAAGCATGTAGACAAAGTGGACGGAGACTGTCATTGTCATCAGGAGCCCTGAGGAAA
CCTCCAGGAGGCCAGACCCTTCCCCTGCAAAACCAGAAAGAGCATTCGTCCCAAAGAAACCACC
TCAATGCCAGGGCCTCTCCCTGAAGCAGGAGCCACTTGGCACTCCACCCAGGGCTGACACCATG
TGAGGTACCGGTCCCCTCACTGTCTTCTACCCAGTGAACACGTGGTCCCATGCGCTCAGTCTAG
GAGAGTAGCCAAAGCTTCTAGGTCTTGAGCTCATTCCTTAGGTGAAGGCCACAATGCTTCCCAT
CTCATTAGGACACTTTTATGCAGTAGAACAGGCCAGGGCTGACGTGTCCTAAATGAGAACATGC
TTGGGCTACCCTTGGCTAAATGGTTCCTACTGAGGGCCCTGCTGAGGGACCCTCCTGAGCAGCA
CTGGGCGCTGATGAGTTTGACTTTACCTAAGAAACATTCTGAGGTAGAGCACAGGACAGCAGGG
TGAGGGAGTGTGTATCCCACAAAGGGGTCCCAGGAAGGCAGCACTGAGAACACCAATGAGACCC
GGGGAAAAGCCCAAAAGCCCAGCCCAAAAGCCCAGTGAGCCAGCCTCGGGCTGTGGGAGGCCTG
CTACTGCCCAAGACAACACACCTCAAACCTCCAAGCAGTTGTTTGAAGGGATTGAGTTGACTGA
TGGGCGTGTGGTCCCTGCTGTCTCGGGAATGGCAAGAGTGCAGAGGGCGGGAAGCAAGCCTTTC
ATAAGCATGGGTAAACTGAGTAACAGCCTTCCTGTGTGTGAGCCGCCAGTGCTACAGGGAGAGG
CTGGGAATGTTTCTGAGTTTTACTCTATTAATGAAAAACTAACCGGCAGGTTTGGCTTCCTTAC
TAGCCTTGTAAGAATCCTCAAACAAGAATATTGAAGTCTCTTCTTGAATTTCAGAACTGTGCAC
CCAAACCAGTAAGATGCAACTGGAGTGCTCTGTAGCAGTTACAGACCTGCCACAGAGCATGTCC
CCTCGTATCTGCCATGTCTGGCCCAGGAGTGCTCAGGGGCACTATTCTCTGATCTTGTTTTTGC
CTTCTTGTTACTTTGTTGCTTTGCCATAACAGAAAGGCCTTCACCGTTGGCTTATAAACACAAG
AGTATCTTCTCAGGGGTTCGCACCCTACAGGGAATATGCAGACCCAAGAAGCCAGAGCATACAG
CCTGTGAGCCGAGCTGTATGCCCAGGTGCCACGTATGCTGAATGAGTATCTTTACCAGCAAGGC
ATTCGGACATTTAGGGACAGAAAGACTACTGCCCGTGGGCATGTCCATGTTGAAGATGTCCCTA
TTCTCTTGGGCTAGTAAGCTGACCTCTGCCTAAAGAAATGCTGGAATAATCTACTGTAAAGCCC
TGGGCATCCCATCTTCCCACATCAGTCTACAATAACCCACTTTGTATTCTCTGTACCCTTCTTA
AGAGCAGTATCTAAGTTATTCAATTTATGTCATGTTAAATGATTTTCCAAAGCCTCATGAGAGA
GGGCACTGTGAGGACCTGAATTCAAAGCCAGTCTACCTAAATAAATACCCCCAGGACACTGTGA
AAGCATCAACACTCCATGGTGGTTTCCCAATAGCCTCCTTCCTGGAAAACCAAACATCACTCCC
TTTCTTATTTGTTGGGAATTTCTATAGCATCAGAGTAAGTGAGAATGCTACGAGGAGATCCAAG
GCAGGTCCAGTAGTAACCTGCAGGGCACATCCAAACCCTGCCTCCTCTTCTCTTCATGTAGCAC
TGAGTGCCTGACAATCATTACAGGTGAGCCTGTCTTCCCGGAGGCCCAGGTCTCTAAGTGGCCT
ATGTTGGAACCTTCAGGGCTAAGAGAAGCAGACAGACGGATGTGGATGGATCCCTGTGTAAGGA
AACCATCTTTTTCAACTCACCATCTCATGCTTTTTCTTTTTTTAACCAAAACCACCTTACTTAA
GAATCTTCCTCTTACAAAGAATTTGGTGGGGAAAACTGCCAACTCATAAGAAATGCCAGACTAG
TGTGTGCACCCAGTGAGGCTGGAAACAAACTTGCTCCCCACCCGAGGATGGCTGCACTTTAATT
GGGTGTGGGGTGCTGTGGGTCCCCCTTCCATGCTAGTTATAGCTGCCCTCCTGGAGCAGCAATC
AGAAGACCAATCCTACGAAGGCACAGTCCCATCACCCCTTAGGTCCCAGGCCTTCCACATCCAC
AGGGCACAGTACGTGAGCACACCCAGCGGAGGCAGGTTTATTCAGTGTCAGTGAAACTGACTCC
CAGCTTCAGCAGGTTACTGCAGCTTCTTGAACAATCAAGGTGATCTGATCAGATCTAACATAAG
AAGCTCATCTGCTTCCAATTCATGACCAAAGTGGCCAGAGACTGAAAATACCCTTCCGTCTGCT
GGAATTTCCCCTCACTAACATGTCTGTTGTCCTGTGATAGTTCTCCATGTGGACAAAGTTCTTT
CGAGACCGTTCTGTTACATCCTCCTTAAACCACCCAGACTGCCTGTTGAATCAGCTTCTGTAGT
TAAACACCTAAAGACTATGTTTAAATGCCTGTAGGTTTTATGTTTGGTTTGGTTTTGTATATAA
ATGATTGTGCGGCTGGGGACCAGGGATGAACGATGGTACACATTCCGTTGTCTTTGCATTACGG
TTTGTGTGTAAGCTTTTTGTTTGGTCTGAGTGCTTTTGGTGAGTCCTCTAAAATGCTAAAACTC
CCCGAAAGCACAACCATGCGGCCACACAAGTTAAGGTCCCTGGAAGTAGAGGGAAATACAGGTG
AGCGCTCAGAGTCCCACAGGCTACTCCGACGTCCTCAGGAGTCAGGCCCACTGAGACAGAAACA
ACTGTCAACTGGTGCCCAGGCTGCCCGCCCACCATTCTCTGAGCGCAGGCCCACAGAGAGCGGG
TACAGAAATGATTTTCTGAGTCATTTCTCTGCTTGTCACTAGGAGGTGAGATCAGTGGTGAGAG
GAAGGGCCACCCTCAGTCACCAGTGGGCTAGGTGTGCCGTCTGTAATTAGCACTTTGAGCCAAG
CACCCCGGTGGCTCTCGGAGTTCCTCCAATGCCAATGGACGGTCATTTTAATGTCACATGAAAG
CACCTTTAATCTTTTGTTGTTATTATTTTAAAAGAATATATTTGTGAAGTGGATAAAAGAAACA
CTGGAAATAGGGTGCTTCTGAAAATGTCAAGCATAAAACATGGGAACAAGGTCCGTGGTGGTTT
CTCCGGCTTTGTCAACAACCCTAACAGTGGAGGAAGTGGCTGGTGGTCTGCCTCGGCCGACTGT
CTCAGATCTGTATTTAACACGTATTTATTTGTTAAATTCTACATTCAGAAGAAATACACTTTGA
ATTTTGGCTAATGTTATAGAACATACTGAAAATTGACTTCTATGTTTTTTTTTAGCACGGGTCC
ACCGTTTTTGTAAAATAAGGCCATTTTTGGACAGCCTTCTTCTAGGAGACCAATTACCATCCAT
TGGTCTGCAGAGCCTCTTTTTATTATGTCCTTGTAATAATGTAAAATATTGACAGCAAA

hide sequence

RefSeq Acc Id:

XM_017596385 ⟹ XP_017451874

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	103,607,950 - 103,827,364 (+)	NCBI
Rnor_6.0	9	111,649,213 - 111,868,583 (+)	NCBI

Sequence:

show sequence

CCCATCTTTGAGGTGCTGGGTTGGGTGCGGTGCTCAGGGCTGCCTCCCGCACTGCTGTATGGTC
GCTCAGCTGCTCAATTCCTCTTTTTTCTCCGCATTTCCTTCCGCTCACTCTCCGCCTTCTCGTC
TCTGAGTCTGAGCTCATCCTAGTAGTACTTCTCAGTCATTTCCTGAATCATCTCGTCAGGTCAC
TTCCCGTGTAGGTAGCCTTTGCCCATTACCATAGAAGTAGGAATCTCAAAGATTATCAGGGGCC
TGTATTTGGCAGCTGTCTCTCTGCGCCTCTTGTAATCGCATCTGACAGGTTTTCTTTGCTGGGT
TTCATCTTTCCTGGTTGACGCTCCTCCGATTCTGGTTTTTCTTTGAAAATTTCACCACCTTGAT
TTCTCGGTGCTTCCTCACGCGTGCCTGAGGGTGTGTACCGTTAATGGCCCCAGAGTCTGGCTGC
TCTGTAGAGCTGGGACGTTTGGCTGACCACAGCGGGCTCTAGCTGCTCAGCAGGGGGAGGTACT
GGTAAATGCCGGCCCTGGAGCTCAGGCCCCCCAGGCAGGACACTCTGGGACAGAGATCCCCTTA
GGGAGGGGTGGAGCTAGCCTCGGACTTCCGCTTCCTGCGGAAGCCTTAGAAGGGTTAGCACGGC
CGGGTTTTCAGGGCATTGTGCTTCTTCTGGGCCAAAAGCAGGCACTTGAAGAGCTGAAACAGTC
AGTCCAGCAATTGCGATGCACTGAGGCAAAGTGCGCAGCACAGAAAGAATTGCTGGAGCAAAAA
GTACAGGAAAATGATGGGAAAGAGCCACCTCCTGTGGTGAATTACGAAGAAGATGCGCGGTCAG
TCACATCTATGGTCCTATTAAGCTTATTTGTAAATGCAGAATAGACTTACCTGTCAGTCACCTC
AGGTCACCTGGAGGGCACTTCAGCAGCCACCCATAGAGTCAGAAGACAAAAAGCTCTTCTCTTG
CCTTCAAAACTGAAAGGACAGACTGAAGTTGTTTTTATCCCTGGGAGACAGCAGGAAGACAGGA
TGATCTGTGGACACACTGACTTCTGCGTGCATACCGTTAGCTCTAGTTAAGATTTGAGATGGAG
CAGAGTGTGGAGTGTCCCCACTGTGAGGGTGACCTGGAGCCTGACTCTGACTCCAAGTTCTGTA
AAAAATGCTCTATACCGATGAGCCCTGGGCCTTCCTCATCAGAGATCCAGAGATACCAGGAAAG
AAAGGAGAGGCTATCCAAATTTGAGTCTATTCGTCATTCAATTGCTGGAATAATTAAGTCTCCA
AAGTCGGTCCTCGGCTCTTCAACGCTCTCTGACGTGATCTCTGTGGGTGAGAAGCCCCTGGCGG
AGCATGACTGGTACCACGGTGCCATCCCCAGGATAGAGGCACAAGAACTGCTGAAGCAGCAGGG
AGACTTCCTGGTGCGAGAGAGCCATGGGAAACCTGGTGAATATGTCCTTTCTGTATATTCTGAC
GGACAAAGGAGGCACTTTATCATACAGTTTGTTGATAATCTATATCGATTTGAGGGCACCGGCT
TTTCAAATATCCCTCAACTTATAGATCACCACTTCAATACAAAGCAAGTCATCACCAAGAAGTC
GGGGGTGGTTCTGCTGAATCCTATTCCAAAGGATAAGAAATGGGTTCTCAATCATGAAGATGTT
TCATTGGGAGAATTACTGGGCAAGGGGAATTTTGGTGAGGTGTACAAGGGCACACTGAAGGATA
AAACCCCTGTTGCTGTTAAAACGTGCAAGGAAGACCTGCCTCAGGAACTAAAAATAAAGTTTTT
ACAGGAAGCCAAAATTCTCAAGCAATATGATCACCCCAATATTGTCAAACTTATAGGCGTGTGC
ACACAAAGACAGCCTGTCTACATCATTATGGAACTGGTCCCAGGAGGTGATTTTCTGTCCTTTC
TGAGGAAGAGGAAGGACGAGCTAAAGTTGAAGCAGTTGGTGAGGTTTTCCTTGGACGTTGCTGC
TGGCATGCTGTATCTCGAGGGCAAGAACTGCATTCACAGGGACCTGGCTGCACGGAACTGCCTG
GTAGGTGAAAATAATACTCTGAAAATCAGTGACTTTGGGATGTCTCGGCAAGAAGACGGTGGAG
TGTATTCATCTTCTGGCTTAAAGCAGATTCCCATTAAGTGGACAGCACCAGAAGCACTGAATTA
TGGGAGATACAGCTCTGAAAGTGACGTGTGGAGCTTCGGCATCCTGCTCTGGGAGACTTTCAGC
CTGGGAGTCTGTCCGTACCCTGGGATGACAAACCAGCAAGCACGGGAACAAGTGGAGAGAGGGT
ATCGGATGTCAGCCCCACAGAACTGTCCCGAGGAAATTTTTACAATCATGATGAAGTGCTGGGA
TTACAAGCCTGAAAACCGCCCTAAGTTCAGTGACCTTCACAAAGAGCTCACGGCCATCAAGAAG
AAAATCACATAGTGCCACCCAGGGCTAGACTCCACCTGCGGGACTCTGTCCTCAGTCACCCTGA
CTTTATACCACCTTACTGCAACCATCTTTGAAGGTTATGTTTTTTATTAACTGGGTTTTTAAAG
TATGTTCCACTTTAAATATGTTAAAGGCAAATTTATTCAAGAAATAAATAGTCCTACCCAGGGC
CGTATTAGCTAACCACAACAACCCTGCCATTTGATGCCCCTGTACAGAGAAGAGCAAGGCCTCC
CAGGAAGGTAAAAGATATCTTTAATACCGAAGAACATTGGTGTTCTGCCAAAGTTTTCTACTCC
GGGCACAGCCTCTGGGCTGCTGTCTTCTGCCGTCGGCCCTCCTCAGTTGGTGCTATAAACAGCC
TTGGTAGCCCATGTTTTGCACAACACGTGCCCACCACAGTTGGCTTTCCACTCTGCCAAGGCAA
GATTCTATCTATAAATAGAATCATATGTTGGGAATCGCTTGGACCTCCTCGGGCTTCTCTCTTC
TTTCCTGTGAGAACATCACACAACCATGTCGTTTGCCTTTCGCTTCCCTCAGCCAGGCCACAGA
AAATGGTGTGTGGAAAATTCCCAGAGAGCCCAGGGGACAGAGGTAGTTGCTTCTGCGGAACAGT
GCAGAGGACAGGGGTGACAAGGAGCATGTGTGACCAGGAGGGCAGGTTGGGAAAAGAGCAGGTA
GCCAGTGCTCACCAGGGAGAAGAAAGCAAGAGCGCCCCCTTCCTCCCAGCTTTCCACCTTCACA
GAACCCGTGTCTGGGTCTCGATTCACTAACAAGGTCTAAGAAAGTTTTCAGGATTCATTGAGCC
CATGCAAACTGTCTTAAAGACACTGAAGCCCACAGAAGAACAGCATGATTCTGGTTGTGTATCT
TCATCCTAGGAGACAATCCCAGAATGGGATTCCCTTCACTTGTACCAGTTTCTGGGTCTTCAGA
ATCCCTGATTCACATTTACAAACACATCCACCCATATCTACTGAAGTGCAGGGCGGCTATGAAT
GAAATAGATGGGCCAGGCGCCAAGTCAGTGTTAATGAAGAAAATCTATAGGGATGCCCACATCT
CCATTTCCTCTTCCCCCTAAAGCCACTCGCTGGAAATGTTACTGAGAACGCAGCGGTATGCAAG
CAGCCATTAAGGTGAAGGCAGGTAAGAGCAGGGTGTGGCTGAGCTGCCTCTTAGCTGCCTCGGG
GAACTTCCCATGGTCTGCGCAGTTGTCTCAGAACCAGTGTGGCCCAGAGATGGTCTCCTCCCTT
CCTGGCCGTGTAGAGCGTGGATCAGACTTTGAAGGAGGCAGCTGAAGAGAGAAGGACTCTGTTC
TATTATTTCAACCTCCTTGCTAATTTTATACACATTTAATGGTTCCTACATGCAGGCTGAAATA
AAGGCACACTGAGCCTGCCCGCAGCAGTACACTGCAGCACACAAAGCAGCTCCCTCCTCCGCGG
GCACAGCCCTCCCACGGGTCCGACCCTGTAAATAAGCAGAGGCCCTGATGGCACACGGCACGGC
ACCCCAAGTGCAAACTCAGGCATTCATGTTGAAGTGTCCTGCTCTCCAGGCATCCGCCGGCCCT
CAGAAAGAGATAAGACATTGCCTCTCGGGAGCCAACTGAATCTGTCTATAATACACTCTGTCTA
TGAAAGGGGAAGAAACAGCCTCTCACTGCTTAGCAGTGGATGCCCAGCAAGGGGCAGGAGGCCG
GCTTGGCTCTGACTCTGTGAACAGGACGAGAAAGGTAATCCCTGCATTCTGGGTACAGAGAACA
TGGCTGGCGCTGACACTCACTCATCCAGGCTCTCAGAATTTGCAATTCACATCATAACTCTTGG
CTTAAGTTAAAAAGGCTTTTCAAAACATCATGACATCTGCAACATTTAAATTCTATTTTATTCT
TTGTCCCAGTGCAGGCAGAGGTATAGTTTAAGATTAACTCATCGGGAGCCTTTCAGGATCATGT
CAGTCATACAGAATATTAAATTTAACATAGGCACGTGCATTAAGAAAAGCTTATGCAAAACATT
CTTACTGTTAATTTTGTTACGCTTAAAGCATAATTTATTCATCCCTTCTGTCACTGATAATTAT
TGGAATTATGTACTTTAGGAGGCTAATCCATACCCAAAAAGTGCACATATAAATACAGTTCTGA
TTTGCAAGTTGATTTAGGGAAGAGAGACTGCAGAAATGCACAAAAGTCTATGATGCCTTTACTT
AAAAAAATAATAATCATAACCAGTGGCACCCCAGTAACACAGGTGTGGACGCCCCGAAGCCTGG
CCACAGATCTTTATTTTACTAACAGATTAGCCAAGAGCGTTGGGGGCCTGCACTGAGCAGCGAG
CGCTCCTTCAGGTCAGCAGTCTGGGCACGCAGGAGAAGGCTGGTGAGCATGAGCGTCTGACTCC
CAATGCAGCGCCTACCTTGAGTCACCAGGAAACCTCCCTGAGAAATGGGAGGTCTGTTTGTTGG
AGACAGCAAACTTTTCTCCCACAGCCACATTCGATGTGGATTTTGTGTGACCTAAGCTTTCTTC
TCAAAGCCGTTTTCTTAGGAAAACGATAAAGAATTACTAGGCCTGTTTTCAGCCCATCCTGATA
TCAGGTCCACAGGGGAAAGTCCCAAGTGATTCTTTTTCTTTTTTCCAAGACTTAACAGGGACAG
TAGAGTCAGTTCCCTTTTCATATCTGGCCACCTTCTCACGGATATCCCTTGTACAGCCTGGAGT
CATTCAGTGCGTGCTCACGGAGAAAACAGAACTTCCTACGACTAAGATTATGTTTGTTTCCTAA
AACAACCAAGTTTCCTTCTGTGTTGGCCTCTGTTGCCATCAGCTGGCTCCTCTGACATCACCAC
AGCACTGTGGTGAGACGGCTGTCACACAAGCATTTCAGTGGCATTACGTGCCACACACCGGATT
TGGGCAGGGAGCAAGCAGGCACAGCAGGACAGATCTGTGCTGTGTGGCGTGACCCTCACATGCT
CTCCAAGTGTTCAGAACATCATTGTAATGTGCCGGGTCTGCAGCATCCTGTAGTCAGCCATGTG
TCCTTGAAGCAGAGTGACATCTAAGGGGCTGTCCGCCTGAGTCCTCTTCCTTTCACACCATTGG
CATGATCCCTGCCTCTTGTCAGTAGATGTGATTGTCACGGGTGATCTCCTTGGAGATCGGAGCC
CTCATACAAAACAGCACCACTGCAGCTGAGGAAGGCGGAGAGAAAGCTCACGTGTGTGTCAACA
TCTTCAGAAGGTGGAATCCAAGGTTTAATATGAAAAATGACTGTTAGAGTGGCATGAGAGTTTA
CTATGAAAATAAAGCATTTCCTCTTGTTAACAGATTTACTATACCATTAGAAGGTTTTACTAGA
TTTTTACTTTACATTTTTCTGGGCTTATTAATTTCATGTCAAAAATGAATACTTTTTTGAGAAC
CCAAAATGTCATTTCTGTATAAGAAAAGACCCTGATTTAAAAGCCAGCAAGATCACCCTGCTAG
GAGTTACTGAGACAGATTTAAGCTCCCATAATATGCCCCTTTGAACATCGTGTTCTAATACAGG
TGGTTAATCAACTCTATATCCTCACCCTGAGTCAGTATGAGAAATGCCCCCCCCTCACCCCAGA
AACTGTCCCTCTGCCTTCCACTAATGCAAAGATGGCATTCAGGAATGGCATTGCTGTCACTCTG
CTAACGTGACAGATTTCTGGGAATAACCCTGCTGTGAAATAACTCATTACAGTGGCCAGGACTA
GTGAGCTGGGGCGCAGAGATCTGTCACTGAATTCCAGGTGGCCTGCAGAGAGCCAAAACAAGAA
AGAACCAGCTCCCTAAAGCATGTAGACAAAGTGGACGGAGACTGTCATTGTCATCAGGAGCCCT
GAGGAAACCTCCAGGAGGCCAGACCCTTCCCCTGCAAAACCAGAAAGAGCATTCGTCCCAAAGA
AACCACCTCAATGCCAGGGCCTCTCCCTGAAGCAGGAGCCACTTGGCACTCCACCCAGGGCTGA
CACCATGTGAGGTACCGGTCCCCTCACTGTCTTCTACCCAGTGAACACGTGGTCCCATGCGCTC
AGTCTAGGAGAGTAGCCAAAGCTTCTAGGTCTTGAGCTCATTCCTTAGGTGAAGGCCACAATGC
TTCCCATCTCATTAGGACACTTTTATGCAGTAGAACAGGCCAGGGCTGACGTGTCCTAAATGAG
AACATGCTTGGGCTACCCTTGGCTAAATGGTTCCTACTGAGGGCCCTGCTGAGGGACCCTCCTG
AGCAGCACTGGGCGCTGATGAGTTTGACTTTACCTAAGAAACATTCTGAGGTAGAGCACAGGAC
AGCAGGGTGAGGGAGTGTGTATCCCACAAAGGGGTCCCAGGAAGGCAGCACTGAGAACACCAAT
GAGACCCGGGGAAAAGCCCAAAAGCCCAGCCCAAAAGCCCAGTGAGCCAGCCTCGGGCTGTGGG
AGGCCTGCTACTGCCCAAGACAACACACCTCAAACCTCCAAGCAGTTGTTTGAAGGGATTGAGT
TGACTGATGGGCGTGTGGTCCCTGCTGTCTCGGGAATGGCAAGAGTGCAGAGGGCGGGAAGCAA
GCCTTTCATAAGCATGGGTAAACTGAGTAACAGCCTTCCTGTGTGTGAGCCGCCAGTGCTACAG
GGAGAGGCTGGGAATGTTTCTGAGTTTTACTCTATTAATGAAAAACTAACCGGCAGGTTTGGCT
TCCTTACTAGCCTTGTAAGAATCCTCAAACAAGAATATTGAAGTCTCTTCTTGAATTTCAGAAC
TGTGCACCCAAACCAGTAAGATGCAACTGGAGTGCTCTGTAGCAGTTACAGACCTGCCACAGAG
CATGTCCCCTCGTATCTGCCATGTCTGGCCCAGGAGTGCTCAGGGGCACTATTCTCTGATCTTG
TTTTTGCCTTCTTGTTACTTTGTTGCTTTGCCATAACAGAAAGGCCTTCACCGTTGGCTTATAA
ACACAAGAGTATCTTCTCAGGGGTTCGCACCCTACAGGGAATATGCAGACCCAAGAAGCCAGAG
CATACAGCCTGTGAGCCGAGCTGTATGCCCAGGTGCCACGTATGCTGAATGAGTATCTTTACCA
GCAAGGCATTCGGACATTTAGGGACAGAAAGACTACTGCCCGTGGGCATGTCCATGTTGAAGAT
GTCCCTATTCTCTTGGGCTAGTAAGCTGACCTCTGCCTAAAGAAATGCTGGAATAATCTACTGT
AAAGCCCTGGGCATCCCATCTTCCCACATCAGTCTACAATAACCCACTTTGTATTCTCTGTACC
CTTCTTAAGAGCAGTATCTAAGTTATTCAATTTATGTCATGTTAAATGATTTTCCAAAGCCTCA
TGAGAGAGGGCACTGTGAGGACCTGAATTCAAAGCCAGTCTACCTAAATAAATACCCCCAGGAC
ACTGTGAAAGCATCAACACTCCATGGTGGTTTCCCAATAGCCTCCTTCCTGGAAAACCAAACAT
CACTCCCTTTCTTATTTGTTGGGAATTTCTATAGCATCAGAGTAAGTGAGAATGCTACGAGGAG
ATCCAAGGCAGGTCCAGTAGTAACCTGCAGGGCACATCCAAACCCTGCCTCCTCTTCTCTTCAT
GTAGCACTGAGTGCCTGACAATCATTACAGGTGAGCCTGTCTTCCCGGAGGCCCAGGTCTCTAA
GTGGCCTATGTTGGAACCTTCAGGGCTAAGAGAAGCAGACAGACGGATGTGGATGGATCCCTGT
GTAAGGAAACCATCTTTTTCAACTCACCATCTCATGCTTTTTCTTTTTTTAACCAAAACCACCT
TACTTAAGAATCTTCCTCTTACAAAGAATTTGGTGGGGAAAACTGCCAACTCATAAGAAATGCC
AGACTAGTGTGTGCACCCAGTGAGGCTGGAAACAAACTTGCTCCCCACCCGAGGATGGCTGCAC
TTTAATTGGGTGTGGGGTGCTGTGGGTCCCCCTTCCATGCTAGTTATAGCTGCCCTCCTGGAGC
AGCAATCAGAAGACCAATCCTACGAAGGCACAGTCCCATCACCCCTTAGGTCCCAGGCCTTCCA
CATCCACAGGGCACAGTACGTGAGCACACCCAGCGGAGGCAGGTTTATTCAGTGTCAGTGAAAC
TGACTCCCAGCTTCAGCAGGTTACTGCAGCTTCTTGAACAATCAAGGTGATCTGATCAGATCTA
ACATAAGAAGCTCATCTGCTTCCAATTCATGACCAAAGTGGCCAGAGACTGAAAATACCCTTCC
GTCTGCTGGAATTTCCCCTCACTAACATGTCTGTTGTCCTGTGATAGTTCTCCATGTGGACAAA
GTTCTTTCGAGACCGTTCTGTTACATCCTCCTTAAACCACCCAGACTGCCTGTTGAATCAGCTT
CTGTAGTTAAACACCTAAAGACTATGTTTAAATGCCTGTAGGTTTTATGTTTGGTTTGGTTTTG
TATATAAATGATTGTGCGGCTGGGGACCAGGGATGAACGATGGTACACATTCCGTTGTCTTTGC
ATTACGGTTTGTGTGTAAGCTTTTTGTTTGGTCTGAGTGCTTTTGGTGAGTCCTCTAAAATGCT
AAAACTCCCCGAAAGCACAACCATGCGGCCACACAAGTTAAGGTCCCTGGAAGTAGAGGGAAAT
ACAGGTGAGCGCTCAGAGTCCCACAGGCTACTCCGACGTCCTCAGGAGTCAGGCCCACTGAGAC
AGAAACAACTGTCAACTGGTGCCCAGGCTGCCCGCCCACCATTCTCTGAGCGCAGGCCCACAGA
GAGCGGGTACAGAAATGATTTTCTGAGTCATTTCTCTGCTTGTCACTAGGAGGTGAGATCAGTG
GTGAGAGGAAGGGCCACCCTCAGTCACCAGTGGGCTAGGTGTGCCGTCTGTAATTAGCACTTTG
AGCCAAGCACCCCGGTGGCTCTCGGAGTTCCTCCAATGCCAATGGACGGTCATTTTAATGTCAC
ATGAAAGCACCTTTAATCTTTTGTTGTTATTATTTTAAAAGAATATATTTGTGAAGTGGATAAA
AGAAACACTGGAAATAGGGTGCTTCTGAAAATGTCAAGCATAAAACATGGGAACAAGGTCCGTG
GTGGTTTCTCCGGCTTTGTCAACAACCCTAACAGTGGAGGAAGTGGCTGGTGGTCTGCCTCGGC
CGACTGTCTCAGATCTGTATTTAACACGTATTTATTTGTTAAATTCTACATTCAGAAGAAATAC
ACTTTGAATTTTGGCTAATGTTATAGAACATACTGAAAATTGACTTCTATGTTTTTTTTTAGCA
CGGGTCCACCGTTTTTGTAAAATAAGGCCATTTTTGGACAGCCTTCTTCTAGGAGACCAATTAC
CATCCATTGGTCTGCAGAGCCTCTTTTTATTATGTCCTTGTAATAATGTAAAATATTGACAGCA
AA

hide sequence

RefSeq Acc Id:

XM_039083431 ⟹ XP_038939359

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	103,520,453 - 103,827,364 (+)	NCBI

RefSeq Acc Id:

XM_039083432 ⟹ XP_038939360

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	103,520,537 - 103,827,364 (+)	NCBI

RefSeq Acc Id:

XM_039083433 ⟹ XP_038939361

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	103,520,453 - 103,827,364 (+)	NCBI

RefSeq Acc Id:

XM_039083434 ⟹ XP_038939362

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	103,520,452 - 103,752,503 (+)	NCBI

RefSeq Acc Id:

XM_039083435 ⟹ XP_038939363

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	103,520,452 - 103,756,107 (+)	NCBI

RefSeq Acc Id:

XM_039083436 ⟹ XP_038939364

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	103,587,997 - 103,827,364 (+)	NCBI

RefSeq Acc Id:

XM_039083438 ⟹ XP_038939366

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	103,612,417 - 103,827,364 (+)	NCBI

RefSeq Acc Id:

XM_039083439 ⟹ XP_038939367

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	103,612,417 - 103,827,364 (+)	NCBI

RefSeq Acc Id:

XM_039083440 ⟹ XP_038939368

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	103,612,417 - 103,827,364 (+)	NCBI

RefSeq Acc Id:

XM_039083441 ⟹ XP_038939369

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	103,607,948 - 103,827,364 (+)	NCBI

RefSeq Acc Id:

XM_039083442 ⟹ XP_038939370

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	103,607,948 - 103,827,364 (+)	NCBI

RefSeq Acc Id:

XM_039083443 ⟹ XP_038939371

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	103,612,417 - 103,827,364 (+)	NCBI

RefSeq Acc Id:

XM_039083444 ⟹ XP_038939372

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	103,612,417 - 103,827,364 (+)	NCBI

RefSeq Acc Id:

XM_039083445 ⟹ XP_038939373

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	103,520,452 - 103,612,560 (+)	NCBI

RefSeq Acc Id:

XM_039083446 ⟹ XP_038939374

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	103,520,452 - 103,627,474 (+)	NCBI

RefSeq Acc Id:

XM_039083447 ⟹ XP_038939375

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	103,520,452 - 103,628,477 (+)	NCBI

RefSeq Acc Id:

XM_039083448 ⟹ XP_038939376

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	103,520,452 - 103,628,328 (+)	NCBI

RefSeq Acc Id:

XR_005488881

RefSeq Status:

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	103,520,452 - 103,814,198 (+)	NCBI

RefSeq Acc Id:

XR_005488882

RefSeq Status:

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	103,520,452 - 103,707,498 (+)	NCBI

RefSeq Acc Id:

XR_005488883

RefSeq Status:

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	103,520,452 - 103,627,476 (+)	NCBI

RefSeq Acc Id:

XR_005488884

RefSeq Status:

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	103,520,452 - 103,628,447 (+)	NCBI

RefSeq Acc Id:

XR_005488885

RefSeq Status:

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	103,520,452 - 103,628,421 (+)	NCBI

RefSeq Acc Id:

XR_005488886

RefSeq Status:

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	103,520,452 - 103,628,429 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001100398	(Get FASTA)	NCBI Sequence Viewer
	NP_001382687	(Get FASTA)	NCBI Sequence Viewer
	XP_008765589	(Get FASTA)	NCBI Sequence Viewer
	XP_017451874	(Get FASTA)	NCBI Sequence Viewer
	XP_038939359	(Get FASTA)	NCBI Sequence Viewer
	XP_038939360	(Get FASTA)	NCBI Sequence Viewer
	XP_038939361	(Get FASTA)	NCBI Sequence Viewer
	XP_038939362	(Get FASTA)	NCBI Sequence Viewer
	XP_038939363	(Get FASTA)	NCBI Sequence Viewer
	XP_038939364	(Get FASTA)	NCBI Sequence Viewer
	XP_038939366	(Get FASTA)	NCBI Sequence Viewer
	XP_038939367	(Get FASTA)	NCBI Sequence Viewer
	XP_038939368	(Get FASTA)	NCBI Sequence Viewer
	XP_038939369	(Get FASTA)	NCBI Sequence Viewer
	XP_038939370	(Get FASTA)	NCBI Sequence Viewer
	XP_038939371	(Get FASTA)	NCBI Sequence Viewer
	XP_038939372	(Get FASTA)	NCBI Sequence Viewer
	XP_038939373	(Get FASTA)	NCBI Sequence Viewer
	XP_038939374	(Get FASTA)	NCBI Sequence Viewer
	XP_038939375	(Get FASTA)	NCBI Sequence Viewer
	XP_038939376	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL91830	(Get FASTA)	NCBI Sequence Viewer
	EDL91831	(Get FASTA)	NCBI Sequence Viewer
	EDL91832	(Get FASTA)	NCBI Sequence Viewer
	P09760	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:

NP_001100398 ⟸ NM_001106928

- Sequence:

show sequence

MEQSVECPHCEGDLEPDSDSKFCKKCSIPMSPGPSSSEIQRYQERKERLSKFESIRHSIAGIIK
SPKSVLGSSTLSDVISVGEKPLAEHDWYHGAIPRIEAQELLKQQGDFLVRESHGKPGEYVLSVY
SDGQRRHFIIQFVDNLYRFEGTGFSNIPQLIDHHFNTKQVITKKSGVVLLNPIPKDKKWVLNHE
DVSLGELLGKGNFGEVYKGTLKDKTPVAVKTCKEDLPQELKIKFLQEAKILKQYDHPNIVKLIG
VCTQRQPVYIIMELVPGGDFLSFLRKRKDELKLKQLVRFSLDVAAGMLYLEGKICIHRDLAARN
CLVGENNTLKISDFGMSRQEDGGVYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSFGILLWET
FSLGVCPYPGMTNQQAREQVERGYRMSAPQNCPEEIFTIMMKCWDYKPENRPKFSDLHKELTAI
KKKIT

hide sequence

RefSeq Acc Id:	XP_008765589 ⟸ XM_008767367
- Peptide Label:	isoform X1
- UniProtKB:	F1MA12 (UniProtKB/Swiss-Prot), P09760 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MGFGSDLKNSQEAVLKLQDWELRLLETVKKFMALRIKSDKEYAYTLQNLCNQVDKDSTVQVNYV SNVSKSWLLMIQQTEQLSRIMKTHAEDLNSGPLHRLTMMIKDKQQVKKSYVGIHQQIEAEMIKV TKTELEKLKSSYRQLIKEMNSAKEKYKEALAKGKETEKAKERCDKATMKLHMLHNQYVLALKGA QLHQSQYYDTTLPLLLDSVQKMQEEMIKALKGIFDEYSEITSLVTEEIVNVHKEIQMSVDQIDP STEYNDFIDVHRTTAAKEQEIEFDTSLLEENENLQANEIMWNNLTADSLQVMLKTLAEELTQTQ QMLLHKEAAVLELEKRIEESSETCAKKSDIVLLLGQKQALEELKQSVQQLRCTEAKCAAQKELL EQKVQENDGKEPPPVVNYEEDARSVTSMERKERLSKFESIRHSIAGIIKSPKSVLGSSTQLSDV ISVGEKPLAEHDWYHGAIPRIEAQELLKQQGDFLVRESHGKPGEYVLSVYSDGQRRHFIIQFVD NLYRFEGTGFSNIPQLIDHHFNTKQVITKKSGVVLLNPIPKDKKWVLNHEDVSLGELLGKGNFG EVYKGTLKDKTPVAVKTCKEDLPQELKIKFLQEAKILKQYDHPNIVKLIGVCTQRQPVYIIMEL VPGGDFLSFLRKRKDELKLKQLVRFSLDVAAGMLYLEGKNCIHRDLAARNCLVGENNTLKISDF GMSRQEDGGVYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSFGILLWETFSLGVCPYPGMTNQ QAREQVERGYRMSAPQNCPEEIFTIMMKCWDYKPENRPKFSDLHKELTAIKKKIT hide sequence

RefSeq Acc Id:	XP_017451874 ⟸ XM_017596385
- Peptide Label:	isoform X7
- UniProtKB:	F1LPI8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEQSVECPHCEGDLEPDSDSKFCKKCSIPMSPGPSSSEIQRYQERKERLSKFESIRHSIAGIIK SPKSVLGSSTLSDVISVGEKPLAEHDWYHGAIPRIEAQELLKQQGDFLVRESHGKPGEYVLSVY SDGQRRHFIIQFVDNLYRFEGTGFSNIPQLIDHHFNTKQVITKKSGVVLLNPIPKDKKWVLNHE DVSLGELLGKGNFGEVYKGTLKDKTPVAVKTCKEDLPQELKIKFLQEAKILKQYDHPNIVKLIG VCTQRQPVYIIMELVPGGDFLSFLRKRKDELKLKQLVRFSLDVAAGMLYLEGKNCIHRDLAARN CLVGENNTLKISDFGMSRQEDGGVYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSFGILLWET FSLGVCPYPGMTNQQAREQVERGYRMSAPQNCPEEIFTIMMKCWDYKPENRPKFSDLHKELTAI KKKIT hide sequence

RefSeq Acc Id:

ENSRNOP00000021758 ⟸ ENSRNOT00000021758

RefSeq Acc Id:

ENSRNOP00000053268 ⟸ ENSRNOT00000056430

RefSeq Acc Id:	XP_038939363 ⟸ XM_039083435
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038939362 ⟸ XM_039083434
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038939375 ⟸ XM_039083447
- Peptide Label:	isoform X10

RefSeq Acc Id:	XP_038939376 ⟸ XM_039083448
- Peptide Label:	isoform X11

RefSeq Acc Id:	XP_038939374 ⟸ XM_039083446
- Peptide Label:	isoform X9

RefSeq Acc Id:	XP_038939373 ⟸ XM_039083445
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_038939359 ⟸ XM_039083431
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038939361 ⟸ XM_039083433
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038939360 ⟸ XM_039083432
- Peptide Label:	isoform X1
- UniProtKB:	F1MA12 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_038939364 ⟸ XM_039083436
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038939369 ⟸ XM_039083441
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038939370 ⟸ XM_039083442
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038939367 ⟸ XM_039083439
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038939366 ⟸ XM_039083438
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038939372 ⟸ XM_039083444
- Peptide Label:	isoform X7
- UniProtKB:	F1LPI8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038939368 ⟸ XM_039083440
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038939371 ⟸ XM_039083443
- Peptide Label:	isoform X6

RefSeq Acc Id:

ENSRNOP00000090379 ⟸ ENSRNOT00000097737

RefSeq Acc Id:

ENSRNOP00000077379 ⟸ ENSRNOT00000117309

RefSeq Acc Id:

ENSRNOP00000095206 ⟸ ENSRNOT00000112759

Protein Domains

F-BAR FCH Protein kinase SH2

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-P09760-F1-model_v2	AlphaFold	P09760	1-823	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1306273	AgrOrtholog
BioCyc Gene	G2FUF-26520	BioCyc
Ensembl Genes	ENSRNOG00000015898	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein	ENSRNOP00000021758	ENTREZGENE
	ENSRNOP00000021758.6	UniProtKB/TrEMBL
	ENSRNOP00000053268	ENTREZGENE
	ENSRNOP00000053268.2	UniProtKB/TrEMBL
	ENSRNOP00000077379.1	UniProtKB/TrEMBL
	ENSRNOP00000090379	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSRNOP00000095206	ENTREZGENE
	ENSRNOP00000095206.1	UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000021758	ENTREZGENE
	ENSRNOT00000021758.8	UniProtKB/TrEMBL
	ENSRNOT00000056430	ENTREZGENE
	ENSRNOT00000056430.3	UniProtKB/TrEMBL
	ENSRNOT00000097737	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSRNOT00000112759	ENTREZGENE
	ENSRNOT00000112759.1	UniProtKB/TrEMBL
	ENSRNOT00000117309.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.1270.60	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	3.30.505.10	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	AH/BAR_dom_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	F_BAR	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	FCH_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Fer	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Fer_F-BAR	UniProtKB/Swiss-Prot
	Fes/Fps/Fer_SH2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Kinase-like_dom_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Prot_kinase_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Protein_kinase_ATP_BS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Ser-Thr/Tyr_kinase_cat_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SH2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SH2_dom_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Tyr-prot_kinase_Fes/Fps	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Tyr_kinase_AS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Tyr_kinase_cat_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene	301737	ENTREZGENE
PANTHER	PTHR24418:SF227	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	FCH	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Pkinase_Tyr	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SH2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Fer	PhenoGen
PIRSF	TyrPK_fps	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PRINTS	SH2DOMAIN	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	TYRKINASE	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE	F_BAR	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PROTEIN_KINASE_ATP	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PROTEIN_KINASE_DOM	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PROTEIN_KINASE_TYR	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SH2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART	FCH	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SH2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	TyrKc	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF103657	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SSF55550	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SSF56112	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A140TAC4_RAT	UniProtKB/TrEMBL
	A0A8I5Y5R1_RAT	UniProtKB/TrEMBL
	A0A8I6ANB7_RAT	UniProtKB/TrEMBL
	F1LPI8	ENTREZGENE, UniProtKB/TrEMBL
	F1MA12	ENTREZGENE
	FER_RAT	UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary	F1MA12	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-01-27	Fer	FER tyrosine kinase	Fer	fer (fps/fes related) tyrosine kinase	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2014-07-09	Fer	fer (fps/fes related) tyrosine kinase	Fert2	fer (fms/fps related) protein kinase, testis specific 2	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2007-02-07	Fert2	fer (fms/fps related) protein kinase, testis specific 2	Fert2_predicted	fer (fms/fps related) protein kinase, testis specific 2 (predicted)	Symbol and Name updated	1299863	APPROVED
2007-02-07	Fert2_predicted	fer (fms/fps related) protein kinase, testis specific 2 (predicted)	Flk_retired	tyrosine protein kinase FLK	Data Merged	737654	APPROVED
2007-02-07	Flk_retired		Flk	tyrosine protein kinase FLK	Symbol withdrawn	1299863	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Annotations - PID (archival)

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Imported Disease Annotations - ClinVar

Imported Annotations - PID (archival)