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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of filopodium assembly
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Accession:GO:0051489 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of the assembly of a filopodium, a thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone.
Synonyms:exact_synonym: regulation of filopodia biosynthesis;   regulation of filopodia formation;   regulation of filopodium formation
 never_in_taxon: NCBITaxon:4751 ! Fungi;   NCBITaxon:4890 ! Ascomycota

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regulation of filopodium assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abitram actin binding transcription modulator involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936559:3,918,108...3,924,371
Ensembl chrNW_004936559:3,918,557...3,924,155 		JBrowse link
G Arf6 ADP ribosylation factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936583:181,490...185,466
Ensembl chrNW_004936583:181,490...185,471 		JBrowse link
G Cdc42 cell division cycle 42 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936474:7,556,765...7,598,687 JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24792215) Ensembl
MGI		 PMID:24792215 GO_REF:0000107 NCBI chrNW_004936501:11,955,334...11,967,338
Ensembl chrNW_004936501:11,955,184...11,967,436 		JBrowse link
G Daam2 dishevelled associated activator of morphogenesis 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:19,771,204...19,878,462
Ensembl chrNW_004936476:19,771,204...19,815,657 		JBrowse link
G Dbn1 drebrin 1 ISO RGD PMID:12878700 RGD:10398728 NCBI chrNW_004936597:1,735,589...1,751,628
Ensembl chrNW_004936597:1,735,380...1,747,569 		JBrowse link
G Dmtn dematin actin binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936555:5,884,746...5,911,171
Ensembl chrNW_004936555:5,896,471...5,910,098 		JBrowse link
G Ephb2 EPH receptor B2 ISO RGD PMID:21364901 RGD:127285794 NCBI chrNW_004936474:8,109,800...8,203,106
Ensembl chrNW_004936474:8,109,031...8,203,106 		JBrowse link
G Fmr1 Fragile X messenger ribonucleoprotein 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936513:1,290,038...1,327,850
Ensembl chrNW_004936513:1,289,558...1,327,856 		JBrowse link
G Fxr1 FMR1 autosomal homolog 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936566:2,354,301...2,425,140
Ensembl chrNW_004936566:2,354,441...2,425,176 		JBrowse link
G Fxr2 FMR1 autosomal homolog 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936595:868,880...886,164
Ensembl chrNW_004936595:868,851...886,170 		JBrowse link
G Gap43 growth associated protein 43 involved_in ISO (PMID:14978216) UniProt PMID:14978216 NCBI chrNW_004936536:2,995,654...3,091,079 JBrowse link
G LOC101966144 cell division control protein 42 homolog involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936580:66,778...89,260 JBrowse link
G Myo10 myosin X involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936480:19,280,723...19,443,267
Ensembl chrNW_004936480:19,282,085...19,443,271 		JBrowse link
G Ppp1r9a protein phosphatase 1 regulatory subunit 9A ISO RGD PMID:12052877 RGD:1299363 NCBI chrNW_004936585:4,981,555...5,277,185 JBrowse link
G Rab17 RAB17, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936525:748,851...765,636
Ensembl chrNW_004936525:748,600...765,642 		JBrowse link
G Rab5a RAB5A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:12,238,226...12,267,339
Ensembl chrNW_004936473:12,238,156...12,269,089 		JBrowse link
G Stau2 staufen double-stranded RNA binding protein 2 ISO RGD PMID:16418534 RGD:10043163 NCBI chrNW_004936648:2,172,263...2,470,494
Ensembl chrNW_004936648:2,171,957...2,469,869 		JBrowse link
G Trpm2 transient receptor potential cation channel subfamily M member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936500:21,960...76,895
Ensembl chrNW_004936500:21,942...77,260 		JBrowse link
negative regulation of filopodium assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap44 Rho GTPase activating protein 44 involved_in ISO PMID:25498153 UniProt
RGD		 PMID:25498153 RGD:14402441 NCBI chrNW_004936595:5,373,645...5,542,915
Ensembl chrNW_004936595:5,373,476...5,543,073 		JBrowse link
G Capzb capping actin protein of muscle Z-line subunit beta involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936474:5,594,193...5,656,665
Ensembl chrNW_004936474:5,594,152...5,709,315 		JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (MGI:5306551|PMID:20869594) BHF-UCL PMID:20869594 MGI:5306551 NCBI chrNW_004936508:1,889,640...2,954,039 JBrowse link
G Prkcd protein kinase C delta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:3,892,625...3,923,467
Ensembl chrNW_004936473:3,892,366...3,923,515 		JBrowse link
G Rab3ip RAB3A interacting protein ISO RGD PMID:22445341 RGD:11534980 NCBI chrNW_004936545:7,558,256...7,610,178
Ensembl chrNW_004936545:7,570,492...7,611,536 		JBrowse link
positive regulation of filopodium assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr3 actin related protein 3 ISO RGD PMID:18256280 RGD:2306202 NCBI chrNW_004936469:55,639,345...55,699,330
Ensembl chrNW_004936469:55,639,068...55,699,640 		JBrowse link
G Agrn agrin involved_in ISO PMID:20471381 UniProt PMID:20471381 RGD:8554517 NCBI chrNW_004936737:2,010,647...2,041,401
Ensembl chrNW_004936737:2,011,724...2,039,796 		JBrowse link
G Arap1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:1,953,770...2,016,875
Ensembl chrNW_004936498:1,953,762...2,003,367 		JBrowse link
G Arpc2 actin related protein 2/3 complex subunit 2 ISO RGD PMID:18256280 RGD:2306202 NCBI chrNW_004936569:758,358...786,995
Ensembl chrNW_004936569:758,199...786,760 		JBrowse link
G Ccl21 C-C motif chemokine ligand 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:2,787,963...2,789,116
Ensembl chrNW_004936524:2,788,341...2,789,016 		JBrowse link
G Cdc42 cell division cycle 42 involved_in ISO (PMID:26051942)
(MGI:5825422|PMID:22494997)		 BHF-UCL
UniProt		 PMID:22494997 PMID:26051942 MGI:5825422 NCBI chrNW_004936474:7,556,765...7,598,687 JBrowse link
G Dnm3 dynamin 3 ISO RGD PMID:17880892 RGD:8553820 NCBI chrNW_004936481:14,971,977...15,411,253
Ensembl chrNW_004936481:14,971,947...15,411,288 		JBrowse link
G Dock11 dedicator of cytokinesis 11 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936479:11,148,877...11,334,381
Ensembl chrNW_004936479:11,148,626...11,334,452 		JBrowse link
G Dpysl3 dihydropyrimidinase like 3 involved_in ISO PMID:17301178 UniProt PMID:17301178 RGD:8554848 NCBI chrNW_004936504:7,261,334...7,365,828
Ensembl chrNW_004936504:7,261,524...7,365,168 		JBrowse link
G Espn espin acts_upstream_of_or_within ISO (PMID:22264607) MGI PMID:22264607 NCBI chrNW_004936623:1,220,435...1,249,743
Ensembl chrNW_004936623:1,220,593...1,248,993 		JBrowse link
G Fmr1 Fragile X messenger ribonucleoprotein 1 involved_in ISO (MGI:3798322|PMID:18539120) UniProt PMID:18539120 MGI:3798322 NCBI chrNW_004936513:1,290,038...1,327,850
Ensembl chrNW_004936513:1,289,558...1,327,856 		JBrowse link
G Fnbp1l formin binding protein 1 like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936537:5,671,517...5,789,480
Ensembl chrNW_004936537:5,671,331...5,790,054 		JBrowse link
G Fscn1 fascin actin-bundling protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936765:609,894...619,417
Ensembl chrNW_004936765:609,861...619,456 		JBrowse link
G Gpm6a glycoprotein M6A involved_in ISO PMID:21426347 UniProt PMID:21426347 RGD:8553615 NCBI chrNW_004936516:6,339,058...6,647,412
Ensembl chrNW_004936516:6,338,819...6,481,425 		JBrowse link
G Mien1 migration and invasion enhancer 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936490:14,910,477...14,911,899
Ensembl chrNW_004936490:14,908,449...14,912,369 		JBrowse link
G Myo3a myosin IIIA involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22264607) TreeGrafter
MGI		 PMID:22264607 GO_REF:0000118 NCBI chrNW_004936484:1,509,248...1,723,717
Ensembl chrNW_004936484:1,509,235...1,723,554 		JBrowse link
G Myo3b myosin IIIB involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22264607) TreeGrafter
MGI		 PMID:22264607 GO_REF:0000118 NCBI chrNW_004936509:615,958...1,074,742
Ensembl chrNW_004936509:615,898...1,074,870 		JBrowse link
G Neurl1 neuralized E3 ubiquitin protein ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936600:2,518,193...2,590,336
Ensembl chrNW_004936600:2,518,265...2,590,344 		JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO PMID:12930820 BHF-UCL PMID:12930820 RGD:8554754 NCBI chrNW_004936703:951,935...1,415,991
Ensembl chrNW_004936703:758,647...1,414,185 		JBrowse link
G Nrp1 neuropilin 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936574:1,694,433...1,834,720
Ensembl chrNW_004936574:1,694,336...1,834,720 		JBrowse link
G Palm paralemmin involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936588:270,431...283,925
Ensembl chrNW_004936588:270,425...283,974 		JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936480:1,188,408...1,273,210
Ensembl chrNW_004936480:1,188,183...1,273,537 		JBrowse link
G Plppr5 phospholipid phosphatase related 5 involved_in ISO (MGI:5705219|PMID:20032306) UniProt PMID:20032306 MGI:5705219 NCBI chrNW_004936537:723,390...829,991
Ensembl chrNW_004936537:723,386...832,067 		JBrowse link
G Prkcq protein kinase C theta ISO RGD PMID:9353339 RGD:1625621 NCBI chrNW_004936484:8,048,239...8,166,058
Ensembl chrNW_004936484:8,048,132...8,167,636 		JBrowse link
G Rac1 Rac family small GTPase 1 ISO RGD PMID:15788770 RGD:2314386 NCBI chrNW_004936750:107,689...122,679
Ensembl chrNW_004936750:107,689...122,676 		JBrowse link
G Rala RAS like proto-oncogene A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:15,167,651...15,186,594
Ensembl chrNW_004936478:15,167,751...15,186,633 		JBrowse link
G Rhoq ras homolog family member Q involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936508:5,692,482...5,727,608
Ensembl chrNW_004936508:5,692,482...5,727,614 		JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936671:1,064,937...1,232,985
Ensembl chrNW_004936671:1,051,742...1,093,021 		JBrowse link
G Srf serum response factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18804439) Ensembl
MGI		 PMID:18804439 GO_REF:0000107 NCBI chrNW_004936476:16,779,941...16,789,499
Ensembl chrNW_004936476:16,782,233...16,789,130 		JBrowse link
G Tenm1 teneurin transmembrane protein 1 involved_in ISO (MGI:5465054|PMID:22698694) UniProt PMID:22698694 MGI:5465054 NCBI chrNW_004936479:5,603,944...6,254,846
Ensembl chrNW_004936479:5,710,613...6,250,232 		JBrowse link
G Tgfb3 transforming growth factor beta 3 acts_upstream_of_or_within ISO (PMID:16806156) MGI PMID:16806156 NCBI chrNW_004936488:4,986,712...5,008,728
Ensembl chrNW_004936488:4,986,748...5,008,496 		JBrowse link
G Tgfbr1 transforming growth factor beta receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16806156) Ensembl
MGI		 PMID:16806156 GO_REF:0000107 NCBI chrNW_004936524:7,656,523...7,680,043
Ensembl chrNW_004936524:7,655,847...7,681,097 		JBrowse link
G Wasl WASP like actin nucleation promoting factor involved_in ISO PMID:20730103 BHF-UCL PMID:20730103 RGD:8554834 NCBI chrNW_004936605:1,741,832...1,816,694
Ensembl chrNW_004936605:1,742,776...1,816,690 		JBrowse link
G Zmynd8 zinc finger MYND-type containing 8 ISO RGD PMID:24117785 RGD:8554267 NCBI chrNW_004936514:6,116,789...6,214,383
Ensembl chrNW_004936514:6,116,676...6,212,996 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15975
    regulation of biological process 10823
      regulation of cellular process 10348
        regulation of cellular component biogenesis 1111
          regulation of cell projection assembly 239
            regulation of plasma membrane bounded cell projection assembly 236
              regulation of filopodium assembly 56
                negative regulation of filopodium assembly 5
                positive regulation of filopodium assembly 34
Path 2
Term Annotations click to browse term
  biological_process 15975
    cellular process 15076
      cellular component organization or biogenesis 6488
        cellular component organization 6281
          cellular component assembly 2948
            cell projection assembly 634
              plasma membrane bounded cell projection assembly 621
                filopodium assembly 75
                  regulation of filopodium assembly 56
                    negative regulation of filopodium assembly 5
                    positive regulation of filopodium assembly 34
paths to the root