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ONTOLOGY REPORT - ANNOTATIONS

Term:photoreceptor cell outer segment organization
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Accession:GO:0035845 term browser browse the term
Definition:A process that is carried out at the cellular level and results in the assembly, arrangement of constituent parts, or disassembly of the outer segment of a photoreceptor cell, a sensory cell that reacts to the presence of light. The outer segment of the photoreceptor cell contains the light-absorbing materials.
Synonyms:exact_synonym: photoreceptor cell outer segment organisation;   photoreceptor outer segment organization


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photoreceptor cell outer segment organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
UniProtKB:Q9QY53 (MGI:4437526|PMID:20081859)
MGI:4360696 (PMID:20592197)		 UniProt
RGD		 PMID:20081859 PMID:20592197 GO_REF:0000024 MGI:4437526 NCBI chr 1:15,762,485...15,891,213
Ensembl chr 1:15,762,462...15,891,041 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within ISO MGI:3055492 (PMID:23178122) RGD PMID:23178122 NCBI chr 8:59,731,912...59,765,408
Ensembl chr 8:59,731,912...59,765,607 		JBrowse link
G Cdhr1 cadherin-related family member 1 involved_in ISO
IEA		 (PMID:23044944)
GO_REF:0000107		 RGD
Ensembl		 PMID:23044944 GO_REF:0000107 NCBI chr16:12,843,436...12,863,321
Ensembl chr16:12,843,437...12,863,396 		JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 acts_upstream_of_or_within ISO MGI:3851598 (PMID:23178122) RGD PMID:23178122 NCBI chr19:9,726,595...9,791,111
Ensembl chr19:9,726,595...9,791,173 		JBrowse link
G Crb1 crumbs cell polarity complex component 1 acts_upstream_of_or_within ISO (PMID:12915475) RGD PMID:12915475 NCBI chr13:50,801,484...50,989,261
Ensembl chr13:50,800,959...50,989,261 		JBrowse link
G Ift140 intraflagellar transport 140 acts_upstream_of_or_within ISO MGI:5311828 (PMID:24619649) RGD PMID:24619649 NCBI chr10:14,032,665...14,121,682
Ensembl chr10:14,032,648...14,120,433 		JBrowse link
G Ift20 intraflagellar transport 20 acts_upstream_of_or_within ISO MGI:3527258|MGI:3817268 (PMID:21307337) RGD PMID:21307337 NCBI chr10:63,432,597...63,438,125
Ensembl chr10:63,432,633...63,438,124 		JBrowse link
G Mfsd2a MFSD2 lysolipid transporter A, lysophospholipid acts_upstream_of_or_within ISO (MGI:5789479|PMID:27008858) RGD PMID:27008858 MGI:5789479 NCBI chr 5:135,225,801...135,240,744
Ensembl chr 5:135,225,816...135,240,690 		JBrowse link
G Nphp1 nephrocystin 1 involved_in ISO UniProtKB:Q8K3E5 (MGI:4437526|PMID:20081859) RGD PMID:20081859 MGI:4437526 NCBI chr 3:114,960,650...115,016,234
Ensembl chr 3:114,960,650...115,016,234 		JBrowse link
G Nphp4 nephrocystin 4 acts_upstream_of_or_within ISO MGI:3032515 (PMID:21078623) RGD PMID:21078623 NCBI chr 5:162,986,157...163,073,708
Ensembl chr 5:162,988,370...163,073,706 		JBrowse link
G Pcare photoreceptor cilium actin regulator involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:5751702 (PMID:25616964)		 GO_Central
RGD		 PMID:25616964 GO_REF:0000033 NCBI chr 6:23,749,700...23,758,424
Ensembl chr 6:23,749,757...23,758,169 		JBrowse link
G Prph2 peripherin 2 acts_upstream_of_or_within ISO MGI:1856523|MGI:6367794|MGI:97998 (PMID:28053051) RGD PMID:28053051 NCBI chr 9:14,066,149...14,081,454
Ensembl chr 9:14,066,156...14,081,454 		JBrowse link
G Rom1 retinal outer segment membrane protein 1 acts_upstream_of_or_within ISO MGI:102791|MGI:2181662 (PMID:28053051) RGD PMID:28053051 NCBI chr 1:205,824,050...205,826,058
Ensembl chr 1:205,824,052...205,826,175 		JBrowse link
G Rp1 RP1, axonemal microtubule associated involved_in ISO (MGI:2676521|PMID:14507858) RGD PMID:14507858 MGI:2676521 NCBI chr 5:15,121,104...15,582,363
Ensembl chr 5:15,121,133...15,579,363 		JBrowse link
G Tmem67 transmembrane protein 67 IMP RGD PMID:23516626 RGD:11535084 NCBI chr 5:25,536,458...25,589,378
Ensembl chr 5:25,536,458...25,589,334 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19692
    cellular process 18168
      cellular component organization or biogenesis 6958
        cellular component organization 6699
          photoreceptor cell outer segment organization 15
Path 2
Term Annotations click to browse term
  biological_process 19692
    developmental process 6963
      anatomical structure development 6486
        multicellular organism development 5239
          system development 4526
            nervous system development 2798
              neurogenesis 2073
                generation of neurons 1780
                  neuron differentiation 1698
                    photoreceptor cell differentiation 92
                      photoreceptor cell development 69
                        photoreceptor cell outer segment organization 15
paths to the root