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ONTOLOGY REPORT - ANNOTATIONS

Term:clathrin binding
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Accession:GO:0030276 term browser browse the term
Definition:Binding to a clathrin heavy or light chain, the main components of the coat of coated vesicles and coated pits, and which also occurs in synaptic vesicles.


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clathrin binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFTPH aftiphilin enables IEA
IBA		 InterPro
Ensembl
TreeGrafter
GO_Central		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:77,351,872...77,422,854
Ensembl chr 3:77,351,881...77,422,238 		JBrowse link
G AP1B1 adaptor related protein complex 1 subunit beta 1 enables IEA InterPro GO_REF:0000002 NCBI chr14:46,469,462...46,520,175
Ensembl chr14:46,469,430...46,520,153 		JBrowse link
G AP2B1 adaptor related protein complex 2 subunit beta 1 enables ISO
IEA		 RGD
Ensembl
InterPro
TreeGrafter		 PMID:8262066 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 RGD:2306271 NCBI chr12:39,803,105...39,940,801
Ensembl chr12:39,800,972...39,932,643 		JBrowse link
G AP3B2 adaptor related protein complex 3 subunit beta 2 enables IEA InterPro GO_REF:0000002 NCBI chr 7:52,202,649...52,294,154
Ensembl chr 7:52,256,159...52,294,149 		JBrowse link
G AP4B1 adaptor related protein complex 4 subunit beta 1 enables IEA InterPro GO_REF:0000002 NCBI chr 4:106,656,632...106,668,252
Ensembl chr 4:106,656,809...106,672,639 		JBrowse link
G ARRB1 arrestin beta 1 ISO RGD PMID:17513300 RGD:5490984 NCBI chr 9:9,516,944...9,597,446
Ensembl chr 9:9,516,947...9,597,976 		JBrowse link
G BCL2L1 BCL2 like 1 enables ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr17:35,366,139...35,415,798
Ensembl chr17:35,366,143...35,414,694 		JBrowse link
G CD2AP CD2 associated protein enables IEA Ensembl GO_REF:0000107 NCBI chr 7:42,218,016...42,332,523
Ensembl chr 7:42,218,290...42,332,518 		JBrowse link
G CLINT1 clathrin interactor 1 enables ISO
IEA		 RGD
Ensembl
TreeGrafter		 PMID:12213833 GO_REF:0000107 GO_REF:0000118 RGD:1303953 NCBI chr16:65,497,483...65,555,313
Ensembl chr16:65,497,500...65,555,310 		JBrowse link
G DAB2 DAB adaptor protein 2 enables ISO (MGI:5442514|PMID:12234931) UniProt PMID:12234931 MGI:5442514 NCBI chr16:24,590,638...24,776,937
Ensembl chr16:24,590,645...24,646,122 		JBrowse link
G DNAJC6 DnaJ heat shock protein family (Hsp40) member C6 enables IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:146,990,115...147,161,010
Ensembl chr 6:146,989,351...147,155,131 		JBrowse link
G ENTHD1 ENTH domain containing 1 enables IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:8,451,589...8,553,527
Ensembl chr 5:8,447,873...8,552,925 		JBrowse link
G EPN1 epsin 1 enables IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:59,789,952...59,802,302
Ensembl chr 6:59,789,946...59,802,299 		JBrowse link
G EPN2 epsin 2 enables IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr12:60,171,916...60,249,539
Ensembl chr12:60,171,920...60,234,278 		JBrowse link
G EPN3 epsin 3 enables IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr12:26,812,653...26,825,485
Ensembl chr12:26,815,461...26,825,482 		JBrowse link
G FGD4 FYVE, RhoGEF and PH domain containing 4 enables ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 5:41,571,054...41,636,058
Ensembl chr 5:41,570,282...41,636,028 		JBrowse link
G GAK cyclin G associated kinase enables IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 8:240,818...296,989
Ensembl chr 8:240,822...296,956 		JBrowse link
G HIP1 huntingtin interacting protein 1 enables ISO
IEA		 RGD
Ensembl
InterPro		 PMID:11889126 GO_REF:0000002 GO_REF:0000107 RGD:708337 NCBI chr 3:10,416,418...10,578,374
Ensembl chr 3:10,416,475...10,578,366 		JBrowse link
G HIP1R huntingtin interacting protein 1 related enables IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chr14:29,996,388...30,024,343
Ensembl chr14:29,993,655...30,024,216 		JBrowse link
G LDLRAP1 low density lipoprotein receptor adaptor protein 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 6:83,030,629...83,054,387
Ensembl chr 6:83,030,702...83,054,377 		JBrowse link
G LOC100625711 synaptotagmin-15 enables IEA TreeGrafter GO_REF:0000118 NCBI chr14:88,123,832...88,132,098 JBrowse link
G LRRK2 leucine rich repeat kinase 2 enables IEA Ensembl GO_REF:0000107 NCBI chr 5:71,800,337...71,945,828
Ensembl chr 5:71,800,225...71,945,828 		JBrowse link
G MYCBPAP MYCBP associated protein enables IBA GO_Central GO_REF:0000033 NCBI chr12:26,791,710...26,811,617
Ensembl chr12:26,791,942...26,811,610 		JBrowse link
G NCALD neurocalcin delta enables IEA Ensembl GO_REF:0000107 NCBI chr 4:34,924,261...35,369,393
Ensembl chr 4:35,186,182...35,367,412 		JBrowse link
G PICALM phosphatidylinositol binding clathrin assembly protein enables IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 9:19,835,934...19,947,239
Ensembl chr 9:19,835,938...20,123,566 		JBrowse link
G PIK3C2A phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha enables IEA Ensembl GO_REF:0000107 NCBI chr 2:41,829,969...42,024,062
Ensembl chr 2:41,829,916...42,024,362 		JBrowse link
G SCLT1 sodium channel and clathrin linker 1 ISO RGD PMID:15797711 RGD:1359053 NCBI chr 8:95,949,460...96,199,116
Ensembl chr 8:95,949,572...96,199,110 		JBrowse link
G SMAP1 small ArfGAP 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 1:50,721,573...50,942,193
Ensembl chr 1:50,781,689...50,942,991 		JBrowse link
G SNAP91 synaptosome associated protein 91 enables IEA InterPro GO_REF:0000002 NCBI chr 1:82,540,998...82,698,652
Ensembl chr 1:82,541,018...82,698,633 		JBrowse link
G SYT1 synaptotagmin 1 enables IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:101,871,313...102,394,310
Ensembl chr 5:101,871,314...102,215,581 		JBrowse link
G SYT10 synaptotagmin 10 enables IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:40,869,418...40,940,851
Ensembl chr 5:40,872,283...40,934,326 		JBrowse link
G SYT11 synaptotagmin 11 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 4:94,139,345...94,163,091
Ensembl chr 4:94,139,347...94,163,049 		JBrowse link
G SYT12 synaptotagmin 12 enables IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:5,410,605...5,434,492
Ensembl chr 2:5,410,627...5,433,926 		JBrowse link
G SYT13 synaptotagmin 13 enables IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:17,120,127...17,166,997
Ensembl chr 2:17,120,634...17,166,990 		JBrowse link
G SYT17 synaptotagmin 17 enables IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:26,447,303...26,548,362
Ensembl chr 3:26,447,342...26,548,657 		JBrowse link
G SYT2 synaptotagmin 2 enables IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr10:24,638,645...24,727,198
Ensembl chr10:24,638,704...24,669,846 		JBrowse link
G SYT3 synaptotagmin 3 enables IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:55,417,949...55,449,322
Ensembl chr 6:55,417,951...55,434,175 		JBrowse link
G SYT4 synaptotagmin 4 enables IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:127,382,248...127,392,258
Ensembl chr 6:127,382,263...127,392,164 		JBrowse link
G SYT5 synaptotagmin 5 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 6:59,381,649...59,389,014
Ensembl chr 6:59,381,642...59,389,298 		JBrowse link
G SYT6 synaptotagmin 6 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:106,420,614...106,485,468
Ensembl chr 4:106,425,632...106,485,468 		JBrowse link
G SYT7 synaptotagmin 7 enables IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:9,947,962...10,012,713
Ensembl chr 2:9,947,925...10,012,496 		JBrowse link
G SYT8 synaptotagmin 8 enables IBA GO_Central GO_REF:0000033 NCBI chr 2:1,245,988...1,250,422
Ensembl chr 2:1,247,878...1,250,437 		JBrowse link
G SYT9 synaptotagmin 9 enables IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 9:2,191,757...2,395,157
Ensembl chr 9:2,191,765...2,391,921 		JBrowse link
G TOM1 target of myb1 membrane trafficking protein enables IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118
G TOM1L1 target of myb1 like 1 membrane trafficking protein enables IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr12:31,207,373...31,271,069
Ensembl chr12:31,207,621...31,272,775 		JBrowse link
G TOM1L2 target of myb1 like 2 membrane trafficking protein enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr12:60,652,153...60,729,257
Ensembl chr12:60,652,189...60,729,259 		JBrowse link
G TRPC5 transient receptor potential cation channel subfamily C member 5 ISO RGD PMID:16025302 RGD:10043786 NCBI chr  X:91,716,334...91,988,364
Ensembl chr  X:91,721,644...91,988,120 		JBrowse link
G TRPC6 transient receptor potential cation channel subfamily C member 6 ISO RGD PMID:16025302 RGD:10043786 NCBI chr 9:32,332,768...32,439,184
Ensembl chr 9:32,332,771...32,439,184 		JBrowse link
clathrin heavy chain binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEMIP cell migration inducing hyaluronidase 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 7:49,622,534...49,792,547
Ensembl chr 7:49,622,539...49,792,543 		JBrowse link
G CLTA clathrin light chain A enables IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:236,971,317...236,993,291
Ensembl chr 1:236,971,505...237,001,731 		JBrowse link
G CLTB clathrin light chain B enables IEA TreeGrafter GO_REF:0000118 NCBI chr 2:81,488,191...81,498,623
Ensembl chr 2:81,488,092...81,495,014 		JBrowse link
G CLTB clathrin light chain B enables IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:81,464,887...81,484,712
Ensembl chr 2:81,464,917...81,485,419 		JBrowse link
G GPR107 G protein-coupled receptor 107 enables IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:270,190,074...270,255,498
Ensembl chr 1:270,190,508...270,255,495 		JBrowse link
G LMBRD1 LMBR1 domain containing 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 1:49,869,184...49,977,984
Ensembl chr 1:49,868,613...49,977,965 		JBrowse link
G LRP1 LDL receptor related protein 1 enables ISO (PMID:26005850) ARUK-UCL PMID:26005850 NCBI chr 5:22,435,636...22,519,276 JBrowse link
G PICALM phosphatidylinositol binding clathrin assembly protein enables IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:19,835,934...19,947,239
Ensembl chr 9:19,835,938...20,123,566 		JBrowse link
G PLK2 polo like kinase 2 ISO RGD PMID:20802490 RGD:152995511 NCBI chr16:37,299,116...37,305,114
Ensembl chr16:37,299,119...37,305,114 		JBrowse link
G SNAP91 synaptosome associated protein 91 enables IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:82,540,998...82,698,652
Ensembl chr 1:82,541,018...82,698,633 		JBrowse link
G TOM1 target of myb1 membrane trafficking protein enables IEA Ensembl GO_REF:0000107
clathrin light chain binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CALY calcyon neuron specific vesicular protein enables IEA Ensembl
InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr14:141,307,092...141,316,460
Ensembl chr14:141,307,684...141,316,292 		JBrowse link
G CLTC clathrin heavy chain enables IEA
IBA		 InterPro
Ensembl
TreeGrafter
GO_Central		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr12:35,848,894...35,926,028
Ensembl chr12:35,848,540...35,926,015 		JBrowse link
G HIP1 huntingtin interacting protein 1 enables IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:10,416,418...10,578,374
Ensembl chr 3:10,416,475...10,578,366 		JBrowse link
G HIP1R huntingtin interacting protein 1 related enables IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr14:29,996,388...30,024,343
Ensembl chr14:29,993,655...30,024,216 		JBrowse link
G NSG1 neuronal vesicle trafficking associated 1 enables IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 8:6,000,054...6,023,379
Ensembl chr 8:6,000,057...6,024,769 		JBrowse link
G NSG2 neuronal vesicle trafficking associated 2 enables IEA
IBA		 InterPro
TreeGrafter
GO_Central		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr16:50,301,023...50,361,870
Ensembl chr16:50,206,076...50,361,859 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 18691
    binding 16250
      protein binding 14178
        clathrin binding 60
          clathrin heavy chain binding 11
          clathrin light chain binding 6
paths to the root