Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:proteasomal ubiquitin-independent protein catabolic process
go back to main search page
Accession:GO:0010499 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds that is mediated by the proteasome but do not involve ubiquitin.

Please select species to view GViewer data.

show annotations for term's descendants           Sort by:
proteasomal ubiquitin-independent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G N Enc1 ectodermal-neural cortex 1 involved_in ISO (PMID:19424503) UniProt PMID:19424503 NCBI chrNW_004624924:281,251...294,248
Ensembl chrNW_004624924:281,327...294,248 		JBrowse link
G G ENC1 ectodermal-neural cortex 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:68,980,137...68,994,112
Ensembl chr 4:68,987,452...68,989,218 		JBrowse link
G P ENC1 ectodermal-neural cortex 1 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:83,678,518...83,691,812
Ensembl chr 2:83,678,521...83,691,400 		JBrowse link
G S Enc1 ectodermal-neural cortex 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936549:2,008,365...2,020,948
Ensembl chrNW_004936549:2,008,363...2,020,948 		JBrowse link
G D ENC1 ectodermal-neural cortex 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:57,175,851...57,184,445
Ensembl chr 2:57,182,480...57,184,249 		JBrowse link
G B ENC1 ectodermal-neural cortex 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:40,668,899...40,682,887
Ensembl chr 5:41,281,115...41,282,884 		JBrowse link
G C Enc1 ectodermal-neural cortex 1 involved_in ISO (PMID:19424503) UniProt PMID:19424503 NCBI chrNW_004955425:26,017,684...26,029,262
Ensembl chrNW_004955425:26,017,684...26,029,262 		JBrowse link
G R Enc1 ectodermal-neural cortex 1 involved_in ISO
IBA		 (PMID:19424503)
GO_REF:0000033		 RGD
GO_Central		 PMID:19424503 GO_REF:0000033 NCBI chr 2:28,550,670...28,562,591
Ensembl chr 2:28,550,464...28,562,713 		JBrowse link
G M Enc1 ectodermal-neural cortex 1 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr13:97,377,613...97,389,548
Ensembl chr13:97,377,613...97,389,542 		JBrowse link
G H ENC1 ectodermal-neural cortex 1 involved_in IDA
IBA		 (PMID:19424503) UniProt
GO_Central		 PMID:19424503 GO_REF:0000033 NCBI chr 5:74,627,409...74,640,728
Ensembl chr 5:74,627,406...74,641,424 		JBrowse link
G N Midn midnolin involved_in ISO (PMID:37616343) UniProt PMID:37616343 NCBI chrNW_004624828:7,417,157...7,427,331
Ensembl chrNW_004624828:7,415,288...7,425,608 		JBrowse link
G G MIDN midnolin involved_in ISO (PMID:37616343) UniProt PMID:37616343 NCBI chr 6:1,017,141...1,027,577
Ensembl chr 6:1,018,290...1,027,618 		JBrowse link
G P MIDN midnolin involved_in ISO (PMID:37616343) UniProt PMID:37616343 NCBI chr 2:77,203,671...77,213,205
Ensembl chr 2:77,204,017...77,211,671 		JBrowse link
G S Midn midnolin involved_in ISO (PMID:37616343) UniProt PMID:37616343 NCBI chrNW_004936588:620,353...627,113
Ensembl chrNW_004936588:620,840...625,443 		JBrowse link
G D MIDN midnolin involved_in ISO (PMID:37616343) UniProt PMID:37616343 NCBI chr20:57,535,165...57,543,014
Ensembl chr20:57,536,880...57,542,977 		JBrowse link
G B MIDN midnolin involved_in ISO (PMID:37616343) UniProt PMID:37616343
G C Midn midnolin involved_in ISO (PMID:37616343) UniProt PMID:37616343 NCBI chrNW_004955495:6,651,331...6,661,846 JBrowse link
G R Midn midnolin involved_in ISO (PMID:37616343) RGD PMID:37616343 NCBI chr 7:9,548,100...9,559,605
Ensembl chr 7:9,549,650...9,559,752 		JBrowse link
G M Midn midnolin involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:79,984,106...79,994,202
Ensembl chr10:79,984,106...79,994,202 		JBrowse link
G H MIDN midnolin involved_in IDA (PMID:37616343) UniProt PMID:37616343 NCBI chr19:1,248,583...1,259,143
Ensembl chr19:1,248,553...1,259,143 		JBrowse link
G N Nfe2l2 NFE2 like bZIP transcription factor 2 involved_in ISO (PMID:19424503) UniProt PMID:19424503 NCBI chrNW_004624787:14,355,330...14,381,353
Ensembl chrNW_004624787:14,355,791...14,381,251 		JBrowse link
G G NFE2L2 NFE2 like bZIP transcription factor 2 involved_in ISO (PMID:19424503) UniProt PMID:19424503 NCBI chr10:62,789,647...62,825,651
Ensembl chr10:62,790,124...62,825,339 		JBrowse link
G P NFE2L2 NFE2 like bZIP transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:82,967,485...83,146,185
Ensembl chr15:82,973,656...83,146,183 		JBrowse link
G S Nfe2l2 NFE2 like bZIP transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936509:6,589,967...6,621,171
Ensembl chrNW_004936509:6,590,630...6,620,262 		JBrowse link
G D NFE2L2 NFE2 like bZIP transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr36:20,989,205...21,087,044
Ensembl chr36:20,989,360...21,012,524 		JBrowse link
G B NFE2L2 NFE2 like bZIP transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:64,509,446...64,544,600
Ensembl chr2B:182,214,116...182,248,085 		JBrowse link
G C Nfe2l2 NFE2 like bZIP transcription factor 2 involved_in ISO (PMID:19424503) UniProt PMID:19424503 NCBI chrNW_004955403:19,510,122...19,536,428
Ensembl chrNW_004955403:19,532,103...19,535,944 		JBrowse link
G R Nfe2l2 NFE2 like bZIP transcription factor 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:19424503)		 UniProt
RGD		 PMID:19424503 GO_REF:0000024 NCBI chr 3:60,594,239...60,621,712
Ensembl chr 3:60,594,242...60,621,737 		JBrowse link
G M Nfe2l2 nuclear factor, erythroid derived 2, like 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:75,505,860...75,535,007
Ensembl chr 2:75,505,857...75,534,985 		JBrowse link
G H NFE2L2 NFE2 like bZIP transcription factor 2 involved_in IDA (PMID:19424503) UniProt PMID:19424503 NCBI chr 2:177,230,303...177,264,727
Ensembl chr 2:177,218,667...177,392,756 		JBrowse link
G N Psme4 proteasome activator subunit 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624833:8,035,768...8,137,655
Ensembl chrNW_004624833:8,035,768...8,137,635 		JBrowse link
G G PSME4 proteasome activator subunit 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:52,999,960...53,108,624
Ensembl chr14:52,999,960...53,108,885 		JBrowse link
G P PSME4 proteasome activator subunit 4 involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:87,231,510...87,337,709
Ensembl chr 3:87,231,755...87,337,703 		JBrowse link
G S Psme4 proteasome activator subunit 4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936491:404,921...503,783
Ensembl chrNW_004936491:404,912...504,326 		JBrowse link
G D PSME4 proteasome activator subunit 4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr10:54,873,093...54,960,030
Ensembl chr10:54,875,177...54,960,035 		JBrowse link
G B PSME4 proteasome activator subunit 4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr2A:54,007,224...54,113,557
Ensembl chr2A:54,919,094...55,024,551 		JBrowse link
G C Psme4 proteasome activator subunit 4 involved_in ISO (MGI:5494329|PMID:23706739) UniProt PMID:23706739 MGI:5494329 NCBI chrNW_004955441:19,586,567...19,663,335
Ensembl chrNW_004955441:19,588,597...19,663,334 		JBrowse link
G R Psme4 proteasome activator subunit 4 involved_in ISO
IBA		 (MGI:5494329|PMID:23706739)
GO_REF:0000033		 RGD
GO_Central		 PMID:23706739 GO_REF:0000033 MGI:5494329 NCBI chr14:104,505,716...104,609,410
Ensembl chr14:104,505,716...104,609,408 		JBrowse link
G M Psme4 proteasome (prosome, macropain) activator subunit 4 involved_in IDA
IBA		 (MGI:5494329|PMID:23706739) UniProt
GO_Central		 PMID:23706739 GO_REF:0000033 MGI:5494329 NCBI chr11:30,721,753...30,831,150
Ensembl chr11:30,721,726...30,830,361 		JBrowse link
G H PSME4 proteasome activator subunit 4 involved_in ISS
IEA
IBA		 UniProt
TreeGrafter
GO_Central
Ensembl		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:53,864,069...53,970,993
Ensembl chr 2:53,864,069...53,970,993 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 180413
    metabolic process 103361
      primary metabolic process 89780
        protein metabolic process 39786
          protein catabolic process 9939
            proteasomal protein catabolic process 5167
              proteasomal ubiquitin-independent protein catabolic process 40
Path 2
Term Annotations click to browse term
  biological_process 180413
    metabolic process 103361
      organic substance metabolic process 99029
        organonitrogen compound metabolic process 49890
          organonitrogen compound catabolic process 13898
            protein catabolic process 9939
              proteolysis involved in protein catabolic process 7431
                proteasomal protein catabolic process 5167
                  proteasomal ubiquitin-independent protein catabolic process 40
paths to the root