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ONTOLOGY REPORT - ANNOTATIONS

Term:proteolysis involved in protein catabolic process
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Accession:GO:0051603 term browser browse the term
Definition:The hydrolysis of a peptide bond or bonds within a protein as part of the chemical reactions and pathways resulting in the breakdown of a protein by individual cells.
Synonyms:exact_synonym: peptidolysis involved in cellular protein catabolic process;   peptidolysis involved in cellular protein catabolism;   proteolysis involved in cellular protein catabolic process
 related_synonym: peptidolysis during cellular protein catabolic process;   peptidolysis during cellular protein catabolism;   proteolysis during cellular protein catabolic process;   proteolysis during cellular protein catabolism


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proteolysis involved in protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts12 ADAM metallopeptidase with thrombospondin type 1 motif, 12 involved_in ISO (PMID:16611630), (PMID:18485748) RGD PMID:16611630 PMID:18485748 NCBI chr 2:60,032,873...60,327,629
Ensembl chr 2:60,032,873...60,327,629 		JBrowse link
G Adamts7 ADAM metallopeptidase with thrombospondin type 1 motif, 7 involved_in ISO (PMID:18485748) RGD PMID:18485748 NCBI chr 8:90,704,727...90,744,331
Ensembl chr 8:90,704,727...90,744,328 		JBrowse link
G Capn2 calpain 2 involved_in ISO (PMID:12150984) RGD PMID:12150984 NCBI chr13:94,150,244...94,200,969
Ensembl chr13:94,150,240...94,200,969 		JBrowse link
G Casp8 caspase 8 involved_in ISO
ISS		 (PMID:10521396)
(MGI:6472603|PMID:32971525)
GO_REF:0000024		 RGD
UniProt		 PMID:10521396 PMID:32971525 GO_REF:0000024 MGI:6472603 NCBI chr 9:60,263,863...60,312,542
Ensembl chr 9:60,264,075...60,312,542 		JBrowse link
G Clpp caseinolytic mitochondrial matrix peptidase proteolytic subunit involved_in ISO (PMID:11923310) RGD PMID:11923310 NCBI chr 9:1,831,680...1,837,700
Ensembl chr 9:1,830,311...1,837,693 		JBrowse link
G Clpx caseinolytic mitochondrial matrix peptidase chaperone subunit X involved_in ISO
IBA
ISS		 (PMID:16115876)
PMID:21873635
GO_REF:0000024		 RGD
UniProt		 PMID:16115876 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 8:65,805,460...65,845,643
Ensembl chr 8:65,805,511...65,845,082 		JBrowse link
G Cpa1 carboxypeptidase A1 IDA RGD PMID:15865404 RGD:1578424 NCBI chr 4:59,257,417...59,263,544
Ensembl chr 4:59,257,417...59,263,544 		JBrowse link
G Ctrl chymotrypsin-like involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr19:33,827,279...33,829,129
Ensembl chr19:33,827,229...33,833,626 		JBrowse link
G Cts7 cathepsin 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:3,388,299...3,424,664
Ensembl chr17:3,388,299...3,393,439 		JBrowse link
G Cts8 cathepsin 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:3,468,710...3,480,881
Ensembl chr17:3,468,710...3,480,881 		JBrowse link
G Ctsb cathepsin B involved_in ISO
IBA
IEA		 (PMID:22952693)
PMID:21873635
GO_REF:0000107
(MGI:2664014|PMID:12782676)		 RGD
Ensembl		 PMID:12782676 PMID:22952693 PMID:21873635 GO_REF:0000107 MGI:2664014, RGD:13792537 NCBI chr15:37,389,636...37,410,508
Ensembl chr15:37,389,629...37,410,500 		JBrowse link
G Ctsc cathepsin C involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:142,028,386...142,059,841
Ensembl chr 1:142,028,392...142,060,387 		JBrowse link
G Ctsf cathepsin F involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:202,152,777...202,158,525
Ensembl chr 1:202,152,728...202,158,525 		JBrowse link
G Ctsh cathepsin H involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:90,608,941...90,627,824
Ensembl chr 8:90,608,941...90,627,824 		JBrowse link
G Ctsj cathepsin J involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:3,738,729...3,743,381
Ensembl chr17:3,738,729...3,743,377 		JBrowse link
G Ctsk cathepsin K involved_in ISO
IBA		 (PMID:11082042), (PMID:22952693)
PMID:21873635
(MGI:2664014|PMID:12782676)		 RGD PMID:11082042 PMID:12782676 PMID:22952693 PMID:21873635 MGI:2664014, RGD:13792537 NCBI chr 2:183,058,586...183,069,551
Ensembl chr 2:183,058,569...183,069,550 		JBrowse link
G Ctsl cathepsin L involved_in ISO
IBA		 (PMID:22952693)
PMID:21873635
(MGI:2664014|PMID:12782676)		 RGD PMID:12782676 PMID:22952693 PMID:21873635 MGI:2664014, RGD:13792537 NCBI chr17:764,370...770,533
Ensembl chr17:764,309...770,548 		JBrowse link
G Ctsm cathepsin M involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:3,236,848...3,242,265
Ensembl chr17:3,236,859...3,242,265 		JBrowse link
G Ctsq cathepsin Q involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:3,627,996...3,633,564
Ensembl chr17:3,629,082...3,633,428 		JBrowse link
G Ctsql2 cathepsin Q-like 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:3,698,973...3,704,787
Ensembl chr17:3,698,918...3,704,685 		JBrowse link
G Ctsr cathepsin R involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:3,522,365...3,531,128
Ensembl chr17:3,522,365...3,531,121 		JBrowse link
G Ctss cathepsin S involved_in ISO
IBA		 (PMID:22952693)
PMID:21873635
(MGI:5553237|PMID:22952693)		 RGD PMID:22952693 PMID:21873635 MGI:5553237, RGD:13792537 NCBI chr 2:183,089,192...183,114,483
Ensembl chr 2:183,086,437...183,114,483 		JBrowse link
G Ctsw cathepsin W involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:202,772,395...202,777,021
Ensembl chr 1:202,772,572...202,775,964 		JBrowse link
G Ctsz cathepsin Z involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:163,224,875...163,235,645
Ensembl chr 3:163,224,875...163,235,645 		JBrowse link
G Dnajc3 DnaJ heat shock protein family (Hsp40) member C3 involved_in ISO (MGI:4418606|PMID:18923430) RGD PMID:18923430 MGI:4418606 NCBI chr15:96,025,729...96,065,114
Ensembl chr15:96,025,624...96,065,181 		JBrowse link
G ENSRNOG00000062555 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 1:224,032,844...224,034,987 JBrowse link
G ENSRNOG00000066438 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 4:27,837,452...27,838,144 JBrowse link
G ENSRNOG00000069501 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 7:96,706,207...96,707,107 JBrowse link
G ENSRNOG00000070269 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr  X:51,562,982...51,565,263 JBrowse link
G ENSRNOG00000070633 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr15:24,257,489...24,258,627 JBrowse link
G Fap fibroblast activation protein, alpha involved_in ISO (PMID:10593948) RGD PMID:10593948 NCBI chr 3:47,138,823...47,207,671
Ensembl chr 3:47,138,813...47,225,545 		JBrowse link
G Fzr1 fizzy and cell division cycle 20 related 1 acts_upstream_of_or_within ISO (MGI:5488524|PMID:23541922) RGD PMID:23541922 MGI:5488524 NCBI chr 7:8,332,029...8,343,953
Ensembl chr 7:8,332,029...8,343,952 		JBrowse link
G Gzma granzyme A involved_in ISO (PMID:12524539), (PMID:32299851) RGD PMID:12524539 PMID:32299851 NCBI chr 2:44,740,638...44,752,471
Ensembl chr 2:44,740,569...44,752,493 		JBrowse link
G Gzmb granzyme B involved_in ISO
ISS		 (PMID:31953257), (PMID:32188940)
GO_REF:0000024		 RGD
UniProt		 PMID:31953257 PMID:32188940 GO_REF:0000024 NCBI chr15:30,343,361...30,346,792
Ensembl chr15:30,173,603...30,346,814 		JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 involved_in ISO (MGI:4418606|PMID:18923430) RGD PMID:18923430 MGI:4418606 NCBI chr 3:18,055,507...18,059,969
Ensembl chr 3:18,055,405...18,059,891 		JBrowse link
G Ide insulin degrading enzyme involved_in IMP
ISO
IBA		 degradation of insulin, beta-endorphin and amyloid-beta peptide
(PMID:9830016)
PMID:21873635		 RGD PMID:9830016 PMID:15749695 PMID:21873635 RGD:1626704, RGD:13792537 NCBI chr 1:235,002,984...235,102,448
Ensembl chr 1:234,995,351...235,102,440 		JBrowse link
G Lgmn legumain involved_in ISS
IEA
IBA
ISO		 GO_REF:0000024
GO_REF:0000002
PMID:21873635
(MGI:3710046|PMID:17350006)
GO_REF:0000107		 UniProt
InterPro
RGD
Ensembl		 PMID:17350006 PMID:21873635 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 MGI:3710046, RGD:13792537 NCBI chr 6:121,544,048...121,582,495
Ensembl chr 6:121,544,053...121,582,480 		JBrowse link
G LOC100360846 proteasome subunit beta type 6-like involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:93,833,914...93,834,630
Ensembl chr 2:93,833,830...93,834,635 		JBrowse link
G LOC100364523 Ctsq protein-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:3,681,700...3,687,099
Ensembl chr17:3,681,717...3,687,099 		JBrowse link
G Lonp1 lon peptidase 1, mitochondrial involved_in ISO (PMID:17420247), (PMID:8248235) RGD PMID:8248235 PMID:17420247 NCBI chr 9:1,447,444...1,459,771
Ensembl chr 9:1,447,447...1,459,771 		JBrowse link
G Malt1 MALT1 paracaspase involved_in ISO (PMID:31133753) RGD PMID:31133753 NCBI chr18:58,942,282...58,996,318
Ensembl chr18:58,942,299...58,994,260 		JBrowse link
G Mdm2 MDM2 proto-oncogene involved_in ISO (PMID:25417702) RGD PMID:25417702 NCBI chr 7:53,290,660...53,315,205
Ensembl chr 7:53,290,664...53,314,915 		JBrowse link
G MGC114246 similar to cathepsin R involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:3,561,144...3,566,649
Ensembl chr17:3,561,144...3,566,639 		JBrowse link
G Plg plasminogen IDA RGD PMID:12928439 PMID:7864083 RGD:1299253, RGD:2301095 NCBI chr 1:48,325,186...48,367,643
Ensembl chr 1:48,325,185...48,367,786 		JBrowse link
G Psma2 proteasome 20S subunit alpha 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:50,554,536...50,564,923
Ensembl chr17:50,551,924...50,564,938 		JBrowse link
G Psma6 proteasome 20S subunit alpha 6 involved_in IEA
ISS
ISO		 GO_REF:0000002
GO_REF:0000024
(PMID:16845397)		 InterPro
BHF-UCL
RGD		 PMID:16845397 GO_REF:0000002 GO_REF:0000024 NCBI chr 6:72,765,534...72,796,554
Ensembl chr 6:72,765,473...72,796,554 		JBrowse link
G Psmb1 proteasome 20S subunit beta 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:56,442,432...56,463,544
Ensembl chr 1:56,420,618...56,463,560 		JBrowse link
G Psmb10 proteasome 20S subunit beta 10 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr19:33,830,958...33,833,442
Ensembl chr19:33,827,229...33,833,626 		JBrowse link
G Psmb4 proteasome 20S subunit beta 4 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:182,442,757...182,445,532
Ensembl chr 2:182,442,756...182,445,746 		JBrowse link
G Psmb6 proteasome 20S subunit beta 6 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:55,239,274...55,241,581
Ensembl chr10:55,239,241...55,241,586 		JBrowse link
G Psmb7 proteasome 20S subunit beta 7 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:22,357,777...22,417,748
Ensembl chr 3:22,354,698...22,417,937 		JBrowse link
G Psmb8 proteasome 20S subunit beta 8 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:4,652,159...4,655,122
Ensembl chr20:4,652,159...4,655,283 		JBrowse link
G Psmb9 proteasome 20S subunit beta 9 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:4,667,044...4,672,512
Ensembl chr20:4,666,046...4,672,512 		JBrowse link
G RGD1308751 similar to Cathepsin L precursor (Major excreted protein) (MEP) involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:3,903,602...3,907,088
Ensembl chr17:3,903,602...3,906,568 		JBrowse link
G RGD1564657 similar to cathepsin 1 precursor involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:3,306,668...3,311,964
Ensembl chr17:3,307,748...3,311,679 		JBrowse link
G RGD1564827 similar to cathepsin M involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:3,752,079...3,756,082
Ensembl chr17:3,752,000...3,760,046 		JBrowse link
G Rnf123 ring finger protein 123 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:108,740,176...108,768,177
Ensembl chr 8:108,739,620...108,767,675 		JBrowse link
G Rspry1 ring finger and SPRY domain containing 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:10,352,449...10,403,015
Ensembl chr19:10,353,821...10,401,102 		JBrowse link
G Testin testin gene involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:3,824,222...3,859,385
Ensembl chr17:3,846,899...3,859,385 		JBrowse link
acrosome matrix dispersal term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acr acrosin IMP RGD PMID:28859281 RGD:13464336 NCBI chr 7:120,636,581...120,644,474
Ensembl chr 7:120,638,321...120,644,474 		JBrowse link
anaphase-promoting complex-dependent catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anapc1 anaphase promoting complex subunit 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:115,850,117...115,930,259
Ensembl chr 3:115,850,185...115,930,273 		JBrowse link
G Anapc10 anaphase promoting complex subunit 10 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr19:28,152,299...28,205,552
Ensembl chr19:28,152,299...28,205,467 		JBrowse link
G Anapc11 anaphase promoting complex subunit 11 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:105,875,209...105,886,307 JBrowse link
G Anapc4 anaphase promoting complex subunit 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:58,125,995...58,159,253
Ensembl chr14:58,125,995...58,157,770 		JBrowse link
G Anapc5 anaphase-promoting complex subunit 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:33,748,714...33,781,709
Ensembl chr12:33,748,735...33,781,781 		JBrowse link
G Cdc20 cell division cycle 20 involved_in ISO
IBA		 (PMID:17443180)
PMID:21873635
(PMID:18753608)		 RGD PMID:17443180 PMID:18753608 PMID:21873635 RGD:13792537 NCBI chr 5:131,966,203...131,970,406
Ensembl chr 5:131,966,215...131,970,512 		JBrowse link
G Cdc23 cell division cycle 23 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:26,236,891...26,260,611
Ensembl chr18:26,236,890...26,291,163 		JBrowse link
G Cdc26 cell division cycle 26 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:75,844,852...75,859,837 JBrowse link
G Cul3 cullin 3 acts_upstream_of_or_within ISO (PMID:10500095) RGD PMID:10500095 NCBI chr 9:81,592,641...81,670,428
Ensembl chr 9:81,592,641...81,670,462 		JBrowse link
G Ecrg4 ECRG4 augurin precursor involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
(MGI:4454240|PMID:20404145)		 RGD PMID:20404145 PMID:21873635 MGI:4454240, RGD:13792537 NCBI chr 9:45,992,954...46,012,605
Ensembl chr 9:45,992,954...46,012,595 		JBrowse link
G Fbxo31 F-box protein 31 involved_in ISS
ISO		 GO_REF:0000024
(PMID:19412162)		 UniProt
RGD		 PMID:19412162 GO_REF:0000024 NCBI chr19:49,624,818...49,656,083
Ensembl chr19:49,627,686...49,656,010 		JBrowse link
G Fzr1 fizzy and cell division cycle 20 related 1 involved_in ISO
IBA		 (PMID:18753608)
(PMID:14701726), (PMID:18662541), (PMID:21596315)
PMID:21873635		 RGD PMID:14701726 PMID:18662541 PMID:18753608 PMID:21596315 PMID:21873635 RGD:13792537 NCBI chr 7:8,332,029...8,343,953
Ensembl chr 7:8,332,029...8,343,952 		JBrowse link
G LOC103692897 anaphase-promoting complex subunit CDC26 pseudogene involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:73,462,396...73,462,806
Ensembl chr 7:73,462,368...73,462,806 		JBrowse link
G Ube2c ubiquitin-conjugating enzyme E2C involved_in IBA
ISO		 PMID:21873635
(PMID:19822757), (PMID:9122200)		 RGD PMID:9122200 PMID:19822757 PMID:21873635 RGD:13792537 NCBI chr 3:153,506,636...153,509,036
Ensembl chr 3:153,506,636...153,513,339 		JBrowse link
G Ube2s ubiquitin-conjugating enzyme E2S involved_in ISS
ISO		 GO_REF:0000024
(PMID:19820702), (PMID:19822757)		 UniProt
RGD		 PMID:19820702 PMID:19822757 GO_REF:0000024 NCBI chr 1:69,028,853...69,032,914
Ensembl chr 1:69,028,750...69,032,914 		JBrowse link
CAT tailing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nemf nuclear export mediator factor involved_in ISO (MGI:6718911|PMID:33909987)
(PMID:33406423), (PMID:33909987)		 RGD PMID:33406423 PMID:33909987 MGI:6718911 NCBI chr 6:87,791,650...87,835,826
Ensembl chr 6:87,791,656...87,835,841 		JBrowse link
cytoplasm protein quality control by the ubiquitin-proteasome system term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rnf126 ring finger protein 126 involved_in ISO (PMID:24981174) RGD PMID:24981174 NCBI chr 7:9,939,359...9,946,963
Ensembl chr 7:9,938,229...9,946,738 		JBrowse link
ER-associated misfolded protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aup1 AUP1, lipid droplet regulating VLDL assembly factor involved_in ISO
ISS		 (PMID:21857022)
GO_REF:0000024		 RGD
UniProt		 PMID:21857022 GO_REF:0000024 NCBI chr 4:115,560,274...115,563,346
Ensembl chr 4:115,560,261...115,563,346 		JBrowse link
G Bag6 BAG cochaperone 6 involved_in ISO
IEA
ISS		 (PMID:23129660), (PMID:24981174)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:23129660 PMID:24981174 GO_REF:0000024 GO_REF:0000107 NCBI chr20:3,675,938...3,690,414
Ensembl chr20:3,675,938...3,688,657 		JBrowse link
G Derl1 derlin 1 involved_in ISO (PMID:24089527) RGD PMID:24089527 NCBI chr 7:89,404,413...89,427,095
Ensembl chr 7:89,404,417...89,427,145 		JBrowse link
G Ngly1 N-glycanase 1 IMP RGD PMID:32259258 RGD:39457703 NCBI chr15:9,153,738...9,210,228
Ensembl chr15:9,153,738...9,204,630 		JBrowse link
G Rnf185 ring finger protein 185 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:78,292,517...78,329,832
Ensembl chr14:78,292,516...78,329,864 		JBrowse link
G Rnf5 ring finger protein 5 involved_in ISO
IBA		 (PMID:19269966)
PMID:21873635		 RGD PMID:19269966 PMID:21873635 RGD:13792537 NCBI chr20:4,145,539...4,147,985
Ensembl chr20:4,145,507...4,147,985 		JBrowse link
G Sdf2l1 stromal cell-derived factor 2-like 1 acts_upstream_of_or_within IMP PMID:23444373 MGI PMID:23444373 RGD:8554667 NCBI chr11:83,872,659...83,874,902
Ensembl chr11:83,872,659...83,874,902 		JBrowse link
G Tor1a torsin family 1, member A involved_in ISS
ISO		 GO_REF:0000024
(MGI:3712415|PMID:17200151)		 UniProt
RGD		 PMID:17200151 GO_REF:0000024 MGI:3712415 NCBI chr 3:14,250,667...14,257,704
Ensembl chr 3:14,250,676...14,257,691 		JBrowse link
G Ufd1 ubiquitin recognition factor in ER associated degradation 1 involved_in IBA
ISO		 PMID:21873635
(PMID:24089527)		 RGD PMID:24089527 PMID:21873635 RGD:13792537 NCBI chr11:82,161,618...82,185,107
Ensembl chr11:82,161,619...82,185,087 		JBrowse link
G Uggt1 UDP-glucose glycoprotein glucosyltransferase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:38,355,229...38,468,473
Ensembl chr 9:38,359,089...38,468,467 		JBrowse link
G Vcp valosin-containing protein involved_in IBA
ISO		 PMID:21873635
(PMID:24089527)		 RGD PMID:24089527 PMID:21873635 RGD:13792537 NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571 		JBrowse link
ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brsk2 BR serine/threonine kinase 2 involved_in ISO
IEA		 (PMID:23907667)
GO_REF:0000107		 RGD
Ensembl		 PMID:23907667 GO_REF:0000107 NCBI chr 1:197,035,522...197,088,624
Ensembl chr 1:197,035,633...197,088,092 		JBrowse link
G Ccdc47 coiled-coil domain containing 47 involved_in ISO
ISS		 (PMID:25009997)
GO_REF:0000024		 RGD
UniProt		 PMID:25009997 GO_REF:0000024 NCBI chr10:91,130,303...91,148,829
Ensembl chr10:91,130,303...91,148,881 		JBrowse link
G Derl1 derlin 1 involved_in ISO (PMID:25239945) RGD PMID:25239945 NCBI chr 7:89,404,413...89,427,095
Ensembl chr 7:89,404,417...89,427,145 		JBrowse link
G Dnajb12 DnaJ heat shock protein family (Hsp40) member B12 involved_in ISO (PMID:21148293), (PMID:21150129) RGD PMID:21148293 PMID:21150129 NCBI chr20:27,828,216...27,846,428
Ensembl chr20:27,828,235...27,846,427 		JBrowse link
G Ndufb9 NADH:ubiquinone oxidoreductase subunit B9 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:90,481,013...90,487,360
Ensembl chr 7:90,436,621...90,488,009 		JBrowse link
G Rcn3 reticulocalbin 3 involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:6201885|PMID:26252542)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:26252542 GO_REF:0000024 GO_REF:0000107 MGI:6201885 NCBI chr 1:95,564,503...95,573,762
Ensembl chr 1:95,564,380...95,573,725 		JBrowse link
G Rhbdd1 rhomboid domain containing 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5437551|PMID:22795130)		 UniProt
RGD		 PMID:22795130 GO_REF:0000024 MGI:5437551 NCBI chr 9:83,630,037...83,748,690
Ensembl chr 9:83,630,063...83,748,689 		JBrowse link
G Rnf139 ring finger protein 139 involved_in IBA
ISO		 PMID:21873635
(PMID:25239945)		 RGD PMID:25239945 PMID:21873635 RGD:13792537 NCBI chr 7:90,439,726...90,450,911
Ensembl chr 7:90,436,621...90,488,009 		JBrowse link
G Rnf185 ring finger protein 185 involved_in ISO UniProtKB:Q99942 (PMID:24019521) RGD PMID:24019521 NCBI chr14:78,292,517...78,329,832
Ensembl chr14:78,292,516...78,329,864 		JBrowse link
G Rnf5 ring finger protein 5 involved_in ISO (PMID:24019521) RGD PMID:24019521 NCBI chr20:4,145,539...4,147,985
Ensembl chr20:4,145,507...4,147,985 		JBrowse link
G Sel1l SEL1L adaptor subunit of ERAD E3 ubiquitin ligase involved_in ISS
IBA
ISO		 GO_REF:0000024
PMID:21873635
(MGI:5606246|PMID:25066055)
(PMID:21454652), (PMID:26471130)		 UniProt
RGD		 PMID:21454652 PMID:25066055 PMID:26471130 PMID:21873635 GO_REF:0000024 MGI:5606246, RGD:13792537 NCBI chr 6:110,735,450...110,779,695
Ensembl chr 6:110,735,450...110,779,648 		JBrowse link
G Sel1l2 SEL1L2 adaptor subunit of ERAD E3 ubiquitin ligase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:127,586,031...127,713,857
Ensembl chr 3:127,586,976...127,713,817 		JBrowse link
G Syvn1 synoviolin 1 involved_in ISO (PMID:22590560), (PMID:26471130)
(MGI:5645202|PMID:21454652)		 RGD PMID:21454652 PMID:22590560 PMID:26471130 MGI:5645202 NCBI chr 1:203,339,235...203,346,137
Ensembl chr 1:203,339,619...203,346,152 		JBrowse link
G Ubxn6 UBX domain protein 6 involved_in ISO (PMID:19275885) RGD PMID:19275885 NCBI chr 9:900,883...906,047
Ensembl chr 9:900,884...906,124 		JBrowse link
G Vcp valosin-containing protein involved_in ISS
ISO		 GO_REF:0000024
(PMID:20104022), (PMID:24129571), (PMID:25088257)		 UniProt
RGD		 PMID:20104022 PMID:24129571 PMID:25088257 GO_REF:0000024 NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571 		JBrowse link
maintenance of unfolded protein involved in ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag6 BAG cochaperone 6 involved_in ISO
IEA		 (PMID:21636303)
GO_REF:0000107		 RGD
Ensembl		 PMID:21636303 GO_REF:0000107 NCBI chr20:3,675,938...3,690,414
Ensembl chr20:3,675,938...3,688,657 		JBrowse link
G Get4 guided entry of tail-anchored proteins factor 4 involved_in ISO (PMID:21636303) RGD PMID:21636303 NCBI chr12:15,377,009...15,394,238
Ensembl chr12:15,377,009...15,394,053 		JBrowse link
G Usp13 ubiquitin specific peptidase 13 involved_in ISO (PMID:24424410) RGD PMID:24424410 NCBI chr 2:115,576,912...115,689,153
Ensembl chr 2:115,577,091...115,686,222 		JBrowse link
mannose trimming involved in glycoprotein ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edem1 ER degradation enhancing alpha-mannosidase like protein 1 involved_in ISO (PMID:25092655) RGD PMID:25092655 NCBI chr 4:141,797,631...141,829,717
Ensembl chr 4:141,797,701...141,829,717 		JBrowse link
G Edem2 ER degradation enhancing alpha-mannosidase like protein 2 involved_in ISO (PMID:25092655) RGD PMID:25092655 NCBI chr 3:144,201,604...144,227,423
Ensembl chr 3:144,201,605...144,227,485 		JBrowse link
G Edem3 ER degradation enhancing alpha-mannosidase like protein 3 involved_in ISO (PMID:25092655)
(MGI:3654428|PMID:16431915)		 RGD PMID:16431915 PMID:25092655 MGI:3654428 NCBI chr13:63,858,282...63,920,538
Ensembl chr13:63,858,716...63,920,523 		JBrowse link
G Man1a1 mannosidase, alpha, class 1A, member 1 involved_in ISO (PMID:27108681) RGD PMID:27108681 NCBI chr20:33,202,509...33,385,747
Ensembl chr20:33,202,517...33,385,824 		JBrowse link
G Man1b1 mannosidase, alpha, class 1B, member 1 involved_in ISO (PMID:18003979), (PMID:21062743) RGD PMID:18003979 PMID:21062743 NCBI chr 3:8,143,877...8,165,007
Ensembl chr 3:8,143,381...8,165,006 		JBrowse link
membrane protein proteolysis involved in retrograde protein transport, ER to cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hm13 histocompatibility minor 13 involved_in ISO (PMID:25239945) RGD PMID:25239945 NCBI chr 3:141,145,769...141,184,703
Ensembl chr 3:141,145,782...141,184,703 		JBrowse link
G Rhbdd1 rhomboid domain containing 1 involved_in ISO (MGI:5437551|PMID:22795130) RGD PMID:22795130 MGI:5437551 NCBI chr 9:83,630,037...83,748,690
Ensembl chr 9:83,630,063...83,748,689 		JBrowse link
modification-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fau FAU ubiquitin like and ribosomal protein S30 fusion involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:203,350,226...203,351,741
Ensembl chr 1:203,350,189...203,351,742 		JBrowse link
G Isg15 ISG15 ubiquitin-like modifier acts_upstream_of_or_within
involved_in		 ISO
IBA		 (MGI:3511369|PMID:15485925)
PMID:21873635		 RGD PMID:15485925 PMID:21873635 MGI:3511369, RGD:13792537 NCBI chr 5:166,784,148...166,785,435
Ensembl chr 5:166,784,148...166,785,435 		JBrowse link
G Nedd8 NEDD8 ubiquitin like modifier involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:29,153,556...29,165,575
Ensembl chr15:29,153,556...29,166,160 		JBrowse link
G Rps27a ribosomal protein S27a involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:103,285,734...103,288,011
Ensembl chr14:103,285,734...103,288,011 		JBrowse link
G Rps27a-ps12 ribosomal protein S27a, pseudogene 12 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:24,242,836...24,243,530 JBrowse link
G Rps27a-ps28 ribosomal protein S27a, pseudogene 28 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:234,661,778...234,662,393
Ensembl chr18:24,242,880...24,243,492 		JBrowse link
G Rps27a-ps5 ribosomal protein S27a, pseudogene 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:34,393,983...34,394,450
Ensembl chr  X:34,393,954...34,394,418 		JBrowse link
G Rps27a-ps6 ribosomal protein S27a, pseudogene 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:30,916,279...30,916,833
Ensembl chr19:30,916,304...30,916,801 		JBrowse link
G Uba52 ubiquitin A-52 residue ribosomal protein fusion product 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:18,918,614...18,920,807
Ensembl chr16:18,900,616...18,920,807 		JBrowse link
G Uba7 ubiquitin-like modifier activating enzyme 7 acts_upstream_of_or_within ISO (MGI:3511369|PMID:15485925) RGD PMID:15485925 MGI:3511369 NCBI chr 8:108,665,289...108,674,099
Ensembl chr 8:108,665,292...108,674,099 		JBrowse link
G Ubb ubiquitin B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:47,247,629...47,249,335
Ensembl chr10:47,245,637...47,249,333 		JBrowse link
G Ubc ubiquitin C involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:31,238,889...31,243,924
Ensembl chr12:31,239,152...31,243,925 		JBrowse link
G Ube2l6 ubiquitin-conjugating enzyme E2L 6 acts_upstream_of_or_within ISO (MGI:3511369|PMID:15485925) RGD PMID:15485925 MGI:3511369 NCBI chr 3:69,873,025...69,888,042
Ensembl chr 3:69,873,424...69,888,048 		JBrowse link
negative regulation of ER-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sgta small glutamine rich tetratricopeptide repeat co-chaperone alpha involved_in ISO
ISS		 (PMID:23129660)
GO_REF:0000024		 RGD
UniProt		 PMID:23129660 GO_REF:0000024 NCBI chr 7:8,653,681...8,670,460
Ensembl chr 7:8,653,778...8,670,458 		JBrowse link
G Svip small VCP interacting protein involved_in IBA
ISO
IC		 PMID:21873635
(PMID:17872946)
PMID:17000876		 RGD PMID:17872946 PMID:21873635 PMID:17000876 RGD:13792537, RGD:10047192 NCBI chr 1:101,587,128...101,592,818
Ensembl chr 1:101,587,128...101,593,116 		JBrowse link
G Usp14 ubiquitin specific peptidase 14 involved_in ISO (PMID:19135427) RGD PMID:19135427 NCBI chr18:1,018,111...1,057,727
Ensembl chr18:1,019,400...1,057,519 		JBrowse link
negative regulation of ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp11 aquaporin 11 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3813160|PMID:18606867)		 UniProt
RGD		 PMID:18606867 GO_REF:0000024 MGI:3813160 NCBI chr 1:152,046,515...152,056,675
Ensembl chr 1:152,046,517...152,056,725 		JBrowse link
G Ubxn1 UBX domain protein 1 involved_in ISO (PMID:21135095) RGD PMID:21135095 NCBI chr 1:205,765,212...205,769,236
Ensembl chr 1:205,745,120...205,816,520 		JBrowse link
G Usp25 ubiquitin specific peptidase 25 involved_in ISO (PMID:22590560) RGD PMID:22590560 NCBI chr11:15,603,654...15,711,356
Ensembl chr11:15,603,881...15,711,348 		JBrowse link
negative regulation of proteasomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alad aminolevulinate dehydratase involved_in ISO (PMID:8175643) RGD PMID:8175643 NCBI chr 5:75,961,993...75,972,334
Ensembl chr 5:75,961,993...75,972,474 		JBrowse link
G F8a1 coagulation factor VIII-associated 1 involved_in ISO
ISS		 (PMID:27815841)
GO_REF:0000024		 RGD
UniProt		 PMID:27815841 GO_REF:0000024 NCBI chr  X:150,957,357...150,958,871
Ensembl chr  X:150,916,679...150,960,168 		JBrowse link
G Gabarapl2 GABA type A receptor associated protein like 2 involved_in ISO (PMID:21669198) RGD PMID:21669198 NCBI chr19:39,910,572...39,921,408
Ensembl chr19:39,910,534...39,924,628 		JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 involved_in IMP
ISO		 PMID:17517623
(MGI:6148636|PMID:17517623)		 RGD PMID:17517623 PMID:17517623 MGI:6148636, RGD:13514081 NCBI chr 9:15,432,986...15,438,358
Ensembl chr 9:15,433,691...15,438,488 		JBrowse link
G Lamp3 lysosomal-associated membrane protein 3 involved_in ISO (PMID:25681212) RGD PMID:25681212 NCBI chr11:81,153,491...81,224,643
Ensembl chr11:81,193,649...81,221,784 		JBrowse link
G Marchf7 membrane associated ring-CH-type finger 7 involved_in ISS
ISO		 GO_REF:0000024
(PMID:29295817)		 UniProt
RGD		 PMID:29295817 GO_REF:0000024 NCBI chr 3:44,680,229...44,720,172
Ensembl chr 3:44,681,632...44,720,168 		JBrowse link
G Ophn1 oligophrenin 1 involved_in ISO
IBA		 (MGI:5303043|PMID:21874017)
PMID:21873635		 RGD PMID:21874017 PMID:21873635 MGI:5303043, RGD:13792537 NCBI chr  X:63,599,746...63,976,678
Ensembl chr  X:63,603,042...63,976,633 		JBrowse link
G Prkcg protein kinase C, gamma involved_in ISS
ISO		 GO_REF:0000024
(MGI:5467682|PMID:23185022)		 UniProt
RGD		 PMID:23185022 GO_REF:0000024 MGI:5467682 NCBI chr 1:65,832,851...65,860,676
Ensembl chr 1:65,832,855...65,859,384 		JBrowse link
G Psme3ip1 proteasome activator subunit 3 interacting protein 1 involved_in ISO (PMID:29934401) RGD PMID:29934401 NCBI chr19:10,401,400...10,430,059
Ensembl chr19:10,401,532...10,429,987 		JBrowse link
G Psmf1 proteasome inhibitor subunit 1 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:10764772)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:10764772 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:140,235,371...140,260,546
Ensembl chr 3:140,235,373...140,260,546 		JBrowse link
G Sco1 synthesis of cytochrome C oxidase 1 acts_upstream_of_or_within ISO MGI:2176228|MGI:5758867 (MGI:5643882|PMID:25683716) RGD PMID:25683716 MGI:5643882 NCBI chr10:51,744,656...51,757,246
Ensembl chr10:51,744,656...51,757,237 		JBrowse link
G Usp19 ubiquitin specific peptidase 19 involved_in ISO (MGI:5614537|PMID:25088257) RGD PMID:25088257 MGI:5614537 NCBI chr 8:109,190,727...109,201,761
Ensembl chr 8:109,190,724...109,201,741 		JBrowse link
negative regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag5 BAG cochaperone 5 involved_in ISO (PMID:24475098) RGD PMID:24475098 NCBI chr 6:130,768,467...130,772,122
Ensembl chr 6:130,768,141...130,772,970 		JBrowse link
G Bag6 BAG cochaperone 6 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:3808636|PMID:18678708)		 UniProt
Ensembl
RGD		 PMID:18678708 GO_REF:0000024 GO_REF:0000107 MGI:3808636 NCBI chr20:3,675,938...3,690,414
Ensembl chr20:3,675,938...3,688,657 		JBrowse link
G Camlg calcium modulating ligand involved_in ISO UniProtKB:Q9H9V4 (PMID:20553626) RGD PMID:20553626 NCBI chr17:8,992,697...9,003,576
Ensembl chr17:8,992,696...9,003,552 		JBrowse link
G Ccar2 cell cycle and apoptosis regulator 2 involved_in ISO (PMID:23398316) RGD PMID:23398316 NCBI chr15:45,212,797...45,228,001
Ensembl chr15:45,212,803...45,227,636 		JBrowse link
G Clec16a C-type lectin domain containing 16A acts_upstream_of_or_within ISO MGI:5648633 (MGI:5603233|PMID:24949970) RGD PMID:24949970 MGI:5603233 NCBI chr10:4,927,804...5,123,749
Ensembl chr10:4,928,030...5,123,578 		JBrowse link
G Ddrgk1 DDRGK domain containing 1 involved_in ISO (PMID:28263186) RGD PMID:28263186 NCBI chr 3:117,861,916...117,882,680
Ensembl chr 3:117,861,653...117,882,680 		JBrowse link
G Eif3h eukaryotic translation initiation factor 3, subunit H involved_in ISO (PMID:32269044) RGD PMID:32269044 NCBI chr 7:83,091,045...83,174,436
Ensembl chr 7:83,091,039...83,174,451 		JBrowse link
G Fhit fragile histidine triad diadenosine triphosphatase involved_in ISO
ISS
IBA		 (PMID:15313915)
GO_REF:0000024
PMID:21873635		 RGD
UniProt		 PMID:15313915 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr15:13,935,029...15,442,620
Ensembl chr15:13,934,995...15,442,340 		JBrowse link
G Gipc1 GIPC PDZ domain containing family, member 1 involved_in ISO (MGI:3807767|PMID:11546783) RGD PMID:11546783 MGI:3807767 NCBI chr19:24,474,291...24,487,083
Ensembl chr19:24,453,123...24,486,997 		JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:24613385)		 UniProt
RGD		 PMID:24613385 GO_REF:0000024 NCBI chr 9:15,432,986...15,438,358
Ensembl chr 9:15,433,691...15,438,488 		JBrowse link
G Klhl40 kelch-like family member 40 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
(MGI:5586592|PMID:24960163)		 RGD PMID:24960163 PMID:21873635 MGI:5586592, RGD:13792537 NCBI chr 8:121,441,275...121,446,806
Ensembl chr 8:121,441,287...121,446,800 		JBrowse link
G Map1a microtubule-associated protein 1A involved_in ISO (MGI:5703671|PMID:26609151) RGD PMID:26609151 MGI:5703671 NCBI chr 3:108,263,217...108,283,936
Ensembl chr 3:108,263,151...108,282,899 		JBrowse link
G Mtm1 myotubularin 1 acts_upstream_of_or_within ISO MGI:2450997 (MGI:5510937|PMID:23695157) RGD PMID:23695157 MGI:5510937 NCBI chr 6:488,691...506,964
Ensembl chr 6:488,969...506,860 		JBrowse link
G N4bp1 Nedd4 binding protein 1 involved_in IBA
ISO		 PMID:21873635
(MGI:3829128|PMID:17592138)		 RGD PMID:17592138 PMID:21873635 MGI:3829128, RGD:13792537 NCBI chr19:20,222,811...20,273,570
Ensembl chr19:20,222,776...20,273,570 		JBrowse link
G Nop53 NOP53 ribosome biogenesis factor involved_in ISO (PMID:22522597) RGD PMID:22522597 NCBI chr 1:76,629,084...76,636,902
Ensembl chr 1:76,629,069...76,636,902 		JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase involved_in IEA
ISO		 GO_REF:0000107
(PMID:26678539)		 Ensembl
RGD		 PMID:26678539 GO_REF:0000107 NCBI chr  X:66,771,278...66,816,148
Ensembl chr  X:66,771,349...66,816,146 		JBrowse link
G Park7 Parkinsonism associated deglycase involved_in ISO (PMID:17015834) RGD PMID:17015834 NCBI chr 5:161,353,718...161,376,993
Ensembl chr 5:161,353,719...161,376,970 		JBrowse link
G Pbk PDZ binding kinase acts_upstream_of_or_within ISO MGI:5293435 (MGI:5293269|PMID:21715333) RGD PMID:21715333 MGI:5293269 NCBI chr15:40,022,873...40,034,014
Ensembl chr15:40,023,002...40,034,014 		JBrowse link
G Phf20l1 PHD finger protein 20-like 1 involved_in ISO
ISS		 (PMID:24492612)
GO_REF:0000024		 RGD
UniProt		 PMID:24492612 GO_REF:0000024 NCBI chr 7:98,330,580...98,396,526
Ensembl chr 7:98,330,580...98,396,526 		JBrowse link
G Rpl11 ribosomal protein L11 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5897550|PMID:21804542)		 UniProt
RGD		 PMID:21804542 GO_REF:0000024 MGI:5897550 NCBI chr 5:148,274,060...148,277,708
Ensembl chr 5:148,274,069...148,277,599 		JBrowse link
G Rybp RING1 and YY1 binding protein involved_in ISO (PMID:27060496) RGD PMID:27060496 NCBI chr 4:132,876,361...132,927,580
NCBI chr 4:132,876,260...132,929,075
Ensembl chr 4:132,876,361...132,928,316 		JBrowse link
G Sdcbp syndecan binding protein involved_in ISO
ISS		 (PMID:25893292)
GO_REF:0000024		 RGD
UniProt		 PMID:25893292 GO_REF:0000024 NCBI chr 5:19,473,499...19,517,188
Ensembl chr 5:19,489,961...19,527,572 		JBrowse link
G Senp1 SUMO specific peptidase 1 acts_upstream_of_or_within ISO MGI:3818522 (MGI:3818351|PMID:17981124) RGD PMID:17981124 MGI:3818351 NCBI chr 7:129,163,173...129,226,766
Ensembl chr 7:129,165,774...129,221,598 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(MGI:3624046|PMID:16611981)		 Ensembl
RGD		 PMID:16611981 GO_REF:0000107 MGI:3624046 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Smarcc1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 acts_upstream_of_or_within ISO (MGI:5310666|PMID:22285184) RGD PMID:22285184 MGI:5310666 NCBI chr 8:110,111,097...110,214,727
Ensembl chr 8:110,111,122...110,214,720 		JBrowse link
G Taf9 TATA-box binding protein associated factor 9 involved_in ISO
IEA		 (PMID:11278372)
GO_REF:0000107		 RGD
Ensembl		 PMID:11278372 GO_REF:0000107 NCBI chr 2:31,794,316...31,798,324
Ensembl chr 2:31,794,142...31,798,769 		JBrowse link
G Tlk2 tousled-like kinase 2 involved_in ISO (PMID:20016786) RGD PMID:20016786 NCBI chr10:90,154,449...90,248,562
Ensembl chr10:90,156,813...90,248,561 		JBrowse link
G Trim39 tripartite motif-containing 39 involved_in IBA
IEA
ISS
ISO		 PMID:21873635
GO_REF:0000107
GO_REF:0000024
(PMID:23213251)		 Ensembl
UniProt
RGD		 PMID:23213251 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr20:2,003,320...2,017,175
Ensembl chr20:1,983,533...2,020,117 		JBrowse link
G Ttc36 tetratricopeptide repeat domain 36 acts_upstream_of_or_within ISO MGI:5588394 (MGI:6362140|PMID:31537781) RGD PMID:31537781 MGI:6362140 NCBI chr 8:45,112,737...45,116,345 JBrowse link
G Ubxn1 UBX domain protein 1 involved_in ISS
IBA
ISO		 GO_REF:0000024
PMID:21873635
(PMID:20351172)		 UniProt
RGD		 PMID:20351172 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:205,765,212...205,769,236
Ensembl chr 1:205,745,120...205,816,520 		JBrowse link
G Uchl5 ubiquitin C-terminal hydrolase L5 involved_in ISO (PMID:23770237) RGD PMID:23770237 NCBI chr13:55,520,722...55,556,503
Ensembl chr13:55,520,729...55,556,502 		JBrowse link
G Usp7 ubiquitin specific peptidase 7 involved_in ISO (PMID:26678539) RGD PMID:26678539 NCBI chr10:6,880,684...6,925,033
Ensembl chr10:6,828,795...6,925,355 		JBrowse link
G Usp9x ubiquitin specific peptidase 9, X-linked involved_in ISO (PMID:33378666) RGD PMID:33378666 NCBI chr  X:9,588,825...9,726,993
Ensembl chr  X:9,588,825...9,696,711 		JBrowse link
G Wac WW domain containing adaptor with coiled-coil involved_in ISO (PMID:22354037) RGD PMID:22354037 NCBI chr17:55,922,686...55,984,286
Ensembl chr17:55,923,123...55,982,301 		JBrowse link
negative regulation of proteolysis involved in protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdkn2a cyclin-dependent kinase inhibitor 2A involved_in
acts_upstream_of_or_within		 ISO UniProtKB:Q9BXM7 (PMID:25217637)
(MGI:5468878|PMID:23277542)		 RGD PMID:23277542 PMID:25217637 MGI:5468878 NCBI chr 5:103,984,949...103,992,143
Ensembl chr 5:103,984,949...104,003,149 		JBrowse link
G Efna1 ephrin A1 involved_in ISO UniProtKB:P54764 (PMID:24217950) RGD PMID:24217950 NCBI chr 2:174,681,676...174,690,306
Ensembl chr 2:174,681,682...174,690,866 		JBrowse link
G Epha4 Eph receptor A4 involved_in ISO UniProtKB:P20827 (PMID:24217950) RGD PMID:24217950 NCBI chr 9:78,815,460...78,958,139
Ensembl chr 9:78,815,460...78,958,139 		JBrowse link
negative regulation of retrograde protein transport, ER to cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Derl2 derlin 2 involved_in ISO (PMID:25660456) RGD PMID:25660456 NCBI chr10:55,727,764...55,739,462
Ensembl chr10:55,727,643...55,739,518 		JBrowse link
G Derl3 derlin 3 involved_in ISO (PMID:25660456) RGD PMID:25660456 NCBI chr20:12,754,490...12,768,454
Ensembl chr20:12,763,543...12,767,027 		JBrowse link
G Erlec1 endoplasmic reticulum lectin 1 involved_in ISO (PMID:25660456) RGD PMID:25660456 NCBI chr14:104,655,745...104,693,508
Ensembl chr14:104,655,673...104,693,480 		JBrowse link
G Os9 OS9, endoplasmic reticulum lectin involved_in ISO (PMID:25660456) RGD PMID:25660456 NCBI chr 7:62,915,498...62,957,591
Ensembl chr 7:62,915,515...62,943,745 		JBrowse link
G Svip small VCP interacting protein involved_in IBA
ISO		 PMID:21873635
(PMID:25660456)		 RGD PMID:25660456 PMID:21873635 RGD:13792537 NCBI chr 1:101,587,128...101,592,818
Ensembl chr 1:101,587,128...101,593,116 		JBrowse link
G Ubac2 UBA domain containing 2 involved_in ISO (PMID:25660456) RGD PMID:25660456 NCBI chr15:98,960,139...99,107,795
Ensembl chr15:98,960,139...99,107,787 		JBrowse link
G Ube2g2 ubiquitin-conjugating enzyme E2G 2 involved_in ISO (PMID:25660456) RGD PMID:25660456 NCBI chr20:10,983,734...11,005,468
Ensembl chr20:10,983,742...11,005,447 		JBrowse link
G Ube2j1 ubiquitin-conjugating enzyme E2, J1 involved_in ISO (PMID:25660456) RGD PMID:25660456 NCBI chr 5:47,422,513...47,441,476
Ensembl chr 5:47,422,587...47,441,461 		JBrowse link
G Yod1 YOD1 deubiquitinase involved_in ISO (PMID:24068323) RGD PMID:24068323 NCBI chr13:42,175,313...42,177,030
Ensembl chr13:42,174,820...42,177,205 		JBrowse link
negative regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pabpn1l PABPN1 like acts_upstream_of_or_within ISO (MGI:6509513|PMID:32558204) RGD PMID:32558204 MGI:6509513 NCBI chr19:50,669,965...50,673,409
Ensembl chr19:50,669,967...50,673,366 		JBrowse link
G Styx serine/threonine/tyrosine interacting protein involved_in IBA
ISO		 PMID:21873635
(PMID:28007894)		 RGD PMID:28007894 PMID:21873635 RGD:13792537 NCBI chr15:18,565,214...18,595,797
Ensembl chr15:18,564,633...18,593,524 		JBrowse link
negative regulation of ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anks1a ankyrin repeat and sterile alpha motif domain containing 1A acts_upstream_of_or_within ISO (MGI:4461099|PMID:20100865) RGD PMID:20100865 MGI:4461099 NCBI chr20:5,963,658...6,117,139
Ensembl chr20:5,963,678...6,117,148 		JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A involved_in
acts_upstream_of_or_within		 ISO (PMID:16173922)
(PMID:18560357)
(MGI:5468878|PMID:23277542)		 RGD PMID:16173922 PMID:18560357 PMID:23277542 MGI:5468878 NCBI chr 5:103,984,949...103,992,143
Ensembl chr 5:103,984,949...104,003,149 		JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 involved_in ISO UniProtKB:P19784|UniProtKB:P25686|UniProtKB:P67870 (PMID:28031292) RGD PMID:28031292 NCBI chr 3:140,709,984...140,756,757
Ensembl chr 3:140,709,991...140,756,696 		JBrowse link
G Csnk2a2 casein kinase 2 alpha 2 involved_in ISO UniProtKB:P25686|UniProtKB:P67870|UniProtKB:P68400 (PMID:28031292) RGD PMID:28031292 NCBI chr19:9,556,443...9,596,080
Ensembl chr19:9,556,260...9,596,080 		JBrowse link
G Hfe homeostatic iron regulator involved_in ISO (PMID:24904118) RGD PMID:24904118 NCBI chr17:41,413,451...41,421,502
Ensembl chr17:41,413,451...41,421,502 		JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 involved_in ISO (PMID:21628596) RGD PMID:21628596 NCBI chr 4:67,439,327...67,619,223
Ensembl chr 4:67,440,501...67,619,223 		JBrowse link
G Pdcl3 phosducin-like 3 acts_upstream_of_or_within ISO (PMID:23792958) RGD PMID:23792958 NCBI chr 9:41,234,322...41,243,769
Ensembl chr 9:41,234,234...41,243,735 		JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (PMID:15195100) RGD PMID:15195100 NCBI chr 8:58,627,347...58,661,927
Ensembl chr 8:58,628,837...58,658,971 		JBrowse link
G Prmt6 protein arginine methyltransferase 6 involved_in ISO (MGI:5688415|PMID:26070566) RGD PMID:26070566 MGI:5688415 NCBI chr 2:197,927,750...197,932,980
Ensembl chr 2:197,927,220...197,933,648 		JBrowse link
G Psen1 presenilin 1 involved_in ISO (MGI:4887523|PMID:20208556) RGD PMID:20208556 MGI:4887523 NCBI chr 6:103,323,014...103,375,088
Ensembl chr 6:103,323,120...103,371,650 		JBrowse link
G Psen2 presenilin 2 involved_in ISO (MGI:4887523|PMID:20208556) RGD PMID:20208556 MGI:4887523 NCBI chr13:91,967,506...91,993,240
Ensembl chr13:91,967,983...91,993,174 		JBrowse link
G Qrich2 glutamine rich 2 involved_in ISO (PMID:30683861)
(MGI:6277293|PMID:30683861)		 RGD PMID:30683861 MGI:6277293 NCBI chr10:101,669,235...101,685,281
NCBI chr10:101,685,289...101,686,370
NCBI chr10:101,686,862...101,688,070
NCBI chr10:101,688,451...101,697,637
Ensembl chr10:101,669,224...101,697,656 		JBrowse link
G Rpl11 ribosomal protein L11 involved_in ISO (PMID:18560357) RGD PMID:18560357 NCBI chr 5:148,274,060...148,277,708
Ensembl chr 5:148,274,069...148,277,599 		JBrowse link
G Rpl23 ribosomal protein L23 involved_in ISO (PMID:15314173) RGD PMID:15314173 NCBI chr10:82,771,878...82,775,840
Ensembl chr10:82,771,538...82,775,870 		JBrowse link
G Rpl5 ribosomal protein L5 involved_in ISO (PMID:18560357) RGD PMID:18560357 NCBI chr14:1,843,856...1,850,301
Ensembl chr14:1,843,770...1,850,290 		JBrowse link
G Rps7 ribosomal protein S7 involved_in ISO (PMID:17310983) RGD PMID:17310983 NCBI chr 6:45,266,200...45,271,064
Ensembl chr 6:45,223,980...45,271,145 		JBrowse link
G Sgta small glutamine rich tetratricopeptide repeat co-chaperone alpha involved_in ISS
ISO		 GO_REF:0000024
(PMID:23129660)		 UniProt
RGD		 PMID:23129660 GO_REF:0000024 NCBI chr 7:8,653,681...8,670,460
Ensembl chr 7:8,653,778...8,670,458 		JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within ISO MGI:1343085 (MGI:4355593|PMID:19684112) RGD PMID:19684112 MGI:4355593 NCBI chr 1:245,257,725...245,355,576
Ensembl chr 1:245,257,768...245,355,577 		JBrowse link
G Taf1 TATA-box binding protein associated factor 1 involved_in ISO (PMID:17237821) RGD PMID:17237821 NCBI chr  X:66,640,915...66,716,543
Ensembl chr  X:66,640,982...66,716,543 		JBrowse link
G Trim39 tripartite motif-containing 39 involved_in ISO (PMID:19100260) RGD PMID:19100260 NCBI chr20:2,003,320...2,017,175
Ensembl chr20:1,983,533...2,020,117 		JBrowse link
G Wnt1 Wnt family member 1 acts_upstream_of_or_within ISO (MGI:3628833|PMID:16601693) RGD PMID:16601693 MGI:3628833 NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651 		JBrowse link
nuclear protein quality control by the ubiquitin-proteasome system term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akirin2 akirin 2 acts_upstream_of_positive_effect ISS
ISO		 GO_REF:0000024
(PMID:34711951)		 UniProt
RGD		 PMID:34711951 GO_REF:0000024 NCBI chr 5:49,108,231...49,122,566
Ensembl chr 5:49,108,220...49,122,568 		JBrowse link
G Cul3 cullin 3 involved_in ISS
ISO		 GO_REF:0000024
(PMID:27561354)		 UniProt
RGD		 PMID:27561354 GO_REF:0000024 NCBI chr 9:81,592,641...81,670,428
Ensembl chr 9:81,592,641...81,670,462 		JBrowse link
G Klhl15 kelch-like family member 15 involved_in ISO
IBA
ISS		 (PMID:27561354)
PMID:21873635
GO_REF:0000024		 RGD
UniProt		 PMID:27561354 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr  X:58,994,726...59,050,207
Ensembl chr  X:58,995,461...59,046,069 		JBrowse link
oxidation-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lonp1 lon peptidase 1, mitochondrial involved_in ISO
IEA		 (PMID:12198491)
GO_REF:0000104		 RGD
UniProt		 PMID:12198491 GO_REF:0000104 NCBI chr 9:1,447,444...1,459,771
Ensembl chr 9:1,447,447...1,459,771 		JBrowse link
positive regulation of anaphase-promoting complex-dependent catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc20 cell division cycle 20 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:131,966,203...131,970,406
Ensembl chr 5:131,966,215...131,970,512 		JBrowse link
G Fzr1 fizzy and cell division cycle 20 related 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:8,332,029...8,343,953
Ensembl chr 7:8,332,029...8,343,952 		JBrowse link
positive regulation of ER-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcap31 B-cell receptor-associated protein 31 involved_in ISO UniProtKB:Q9BUN8 (PMID:18555783) RGD PMID:18555783 NCBI chr  X:151,397,567...151,429,666
Ensembl chr  X:151,397,576...151,428,506 		JBrowse link
G Cav1 caveolin 1 involved_in ISO (PMID:24089527) RGD PMID:24089527 NCBI chr 4:45,640,624...45,673,708
Ensembl chr 4:45,634,918...45,673,705 		JBrowse link
G Herpud1 homocysteine inducible ER protein with ubiquitin like domain 1 involved_in ISO (PMID:18307982), (PMID:22045699) RGD PMID:18307982 PMID:22045699 NCBI chr19:10,598,411...10,609,002
Ensembl chr19:10,598,417...10,618,424 		JBrowse link
G Sgta small glutamine rich tetratricopeptide repeat co-chaperone alpha involved_in ISO (PMID:23246001) RGD PMID:23246001 NCBI chr 7:8,653,681...8,670,460
Ensembl chr 7:8,653,778...8,670,458 		JBrowse link
G Ubqln1 ubiquilin 1 involved_in IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:18307982)		 Ensembl
UniProt
RGD		 PMID:18307982 GO_REF:0000024 GO_REF:0000107 NCBI chr17:6,439,002...6,477,096
Ensembl chr17:6,439,002...6,477,090 		JBrowse link
G Ubqln2 ubiquilin 2 involved_in ISO (PMID:18307982) RGD PMID:18307982 NCBI chr  X:17,853,086...17,856,505
Ensembl chr  X:17,853,114...17,856,505 		JBrowse link
positive regulation of ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atxn3 ataxin 3 involved_in ISO (PMID:17000876) RGD PMID:17000876 NCBI chr 6:121,072,228...121,107,902
Ensembl chr 6:121,074,448...121,107,902 		JBrowse link
G Bag6 BAG cochaperone 6 involved_in ISO
IEA		 (PMID:24424410)
GO_REF:0000107		 RGD
Ensembl		 PMID:24424410 GO_REF:0000107 NCBI chr20:3,675,938...3,690,414
Ensembl chr20:3,675,938...3,688,657 		JBrowse link
G Rnf185 ring finger protein 185 involved_in ISO
ISS		 (PMID:27485036)
GO_REF:0000024		 RGD
UniProt		 PMID:27485036 GO_REF:0000024 NCBI chr14:78,292,517...78,329,832
Ensembl chr14:78,292,516...78,329,864 		JBrowse link
G Rnft1 ring finger protein, transmembrane 1 involved_in ISO
IBA		 (PMID:27485036)
PMID:21873635		 RGD PMID:27485036 PMID:21873635 RGD:13792537 NCBI chr10:71,310,052...71,322,507
Ensembl chr10:71,310,104...71,323,778 		JBrowse link
G Rnft2 ring finger protein, transmembrane 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:38,329,217...38,387,303
Ensembl chr12:38,329,269...38,387,290 		JBrowse link
G Tmem259 transmembrane protein 259 involved_in IBA
ISO		 PMID:21873635
(MGI:5648655|PMID:25977983)		 RGD PMID:25977983 PMID:21873635 MGI:5648655, RGD:13792537 NCBI chr 7:9,724,196...9,730,932
Ensembl chr 7:9,722,485...9,730,932 		JBrowse link
G Tmem67 transmembrane protein 67 IMP RGD PMID:19815549 RGD:8554391 NCBI chr 5:25,536,458...25,589,378
Ensembl chr 5:25,536,458...25,589,334 		JBrowse link
G Usp13 ubiquitin specific peptidase 13 involved_in ISO (PMID:24424410) RGD PMID:24424410 NCBI chr 2:115,576,912...115,689,153
Ensembl chr 2:115,577,091...115,686,222 		JBrowse link
G Wfs1 wolframin ER transmembrane glycoprotein involved_in ISO (MGI:4999711|PMID:19911006) RGD PMID:19911006 MGI:4999711 NCBI chr14:73,810,478...73,834,993
Ensembl chr14:73,810,404...73,835,602 		JBrowse link
positive regulation of proteasomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag2 BAG cochaperone 2 involved_in ISO UniProtKB:P10636 (MGI:6148635|PMID:19228967) RGD PMID:19228967 MGI:6148635 NCBI chr 9:35,970,033...35,980,677
Ensembl chr 9:35,970,033...35,980,721 		JBrowse link
G Dab2ip DAB2 interacting protein involved_in ISO
ISS		 (PMID:20080667)
GO_REF:0000024		 RGD
UniProt		 PMID:20080667 GO_REF:0000024 NCBI chr 3:18,915,290...19,086,282
Ensembl chr 3:18,915,290...19,086,280 		JBrowse link
G Ddrgk1 DDRGK domain containing 1 involved_in ISO (PMID:23675531) RGD PMID:23675531 NCBI chr 3:117,861,916...117,882,680
Ensembl chr 3:117,861,653...117,882,680 		JBrowse link
G Ecscr endothelial cell surface expressed chemotaxis and apoptosis regulator involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
(PMID:19416853)		 RGD PMID:19416853 PMID:21873635 RGD:13792537 NCBI chr18:27,309,711...27,319,106
Ensembl chr18:27,309,718...27,319,032 		JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 involved_in ISO (PMID:23858059)
(MGI:5543313|PMID:23858059)		 RGD PMID:23858059 MGI:5543313 NCBI chr 2:170,150,552...170,310,698
Ensembl chr 2:170,149,694...170,309,941 		JBrowse link
G Fmr1 fragile X messenger ribonucleoprotein 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5770038|PMID:24709664)		 UniProt
RGD		 PMID:24709664 GO_REF:0000024 MGI:5770038 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050 		JBrowse link
G Kcne2 potassium voltage-gated channel subfamily E regulatory subunit 2 involved_in ISO (PMID:22180649) RGD PMID:22180649 NCBI chr11:31,517,176...31,530,026
Ensembl chr11:31,295,614...31,530,043 		JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator involved_in ISS
ISO		 GO_REF:0000024
(PMID:16300740)		 UniProt
RGD		 PMID:16300740 GO_REF:0000024 NCBI chr 1:181,213,292...181,215,327 JBrowse link
G Osbpl7 oxysterol binding protein-like 7 involved_in ISO (PMID:21669198) RGD PMID:21669198 NCBI chr10:82,035,995...82,053,566
Ensembl chr10:82,036,042...82,053,557 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO UniProtKB:Q9WVS6 (PMID:23858059) RGD PMID:23858059 NCBI chr 1:48,688,651...49,882,520
Ensembl chr 1:48,690,556...49,882,555 		JBrowse link
G Psmc1 proteasome 26S subunit, ATPase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 6:119,392,833...119,405,233
Ensembl chr 6:119,392,855...119,410,123 		JBrowse link
G Psmc2 proteasome 26S subunit, ATPase 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:13,255,851...13,270,102
Ensembl chr 4:13,255,856...13,270,185 		JBrowse link
G Psmc3 proteasome 26S subunit, ATPase 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:77,031,825...77,037,207
Ensembl chr 3:77,031,825...77,043,358 		JBrowse link
G Psmc4 proteasome 26S subunit, ATPase 4 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:83,349,127...83,357,497
Ensembl chr 1:83,348,592...83,357,494 		JBrowse link
G Psmc5 proteasome 26S subunit, ATPase 5 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:91,187,763...91,193,697
Ensembl chr10:91,187,743...91,213,135 		JBrowse link
G Psmc6 proteasome 26S subunit, ATPase 6 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr15:18,542,585...18,564,057
Ensembl chr15:18,542,563...18,564,055 		JBrowse link
G Rnf40 ring finger protein 40 IDA RGD PMID:12121982 RGD:633892 NCBI chr 1:182,202,475...182,217,899
Ensembl chr 1:182,202,600...182,217,241 		JBrowse link
G Tmtc3 transmembrane O-mannosyltransferase targeting cadherins 3 involved_in ISO (PMID:21603654) RGD PMID:21603654 NCBI chr 7:35,264,886...35,310,010
Ensembl chr 7:35,264,892...35,310,385 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (MGI:6150565|PMID:29518356) RGD PMID:29518356 MGI:6150565 NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170 		JBrowse link
G Xbp1 X-box binding protein 1 acts_upstream_of_or_within ISO (MGI:4946566|PMID:21317886) RGD PMID:21317886 MGI:4946566 NCBI chr14:80,390,629...80,395,713
Ensembl chr14:80,390,643...80,395,693 		JBrowse link
positive regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 acts_upstream_of_or_within
involved_in		 ISO (MGI:3589701|PMID:15937334)
(PMID:23512198)		 RGD PMID:15937334 PMID:23512198 MGI:3589701 NCBI chr 6:131,713,716...131,735,319
Ensembl chr 6:131,713,720...131,733,921 		JBrowse link
G Ankib1 ankyrin repeat and IBR domain containing 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:30,333,678...30,457,781
Ensembl chr 4:30,333,677...30,457,781 		JBrowse link
G Arih1 ariadne RBR E3 ubiquitin protein ligase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:59,777,378...59,879,762
Ensembl chr 8:59,777,379...59,880,245 		JBrowse link
G Arih2 ariadne RBR E3 ubiquitin protein ligase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:109,296,738...109,355,909
Ensembl chr 8:109,296,738...109,355,852 		JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO MGI:2446434|MGI:3587769|MGI:3691571 (MGI:5465208|PMID:23152632) RGD PMID:23152632 MGI:5465208 NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593 		JBrowse link
G Aurka aurora kinase A acts_upstream_of_or_within ISO (MGI:3697244|PMID:17060449) RGD PMID:17060449 MGI:3697244 NCBI chr 3:161,128,309...161,144,524
Ensembl chr 3:161,128,313...161,144,390 		JBrowse link
G Axin1 axin 1 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (MGI:3628833|PMID:16601693)
PMID:21873635		 RGD PMID:16601693 PMID:21873635 MGI:3628833, RGD:13792537 NCBI chr10:15,163,684...15,215,615
Ensembl chr10:15,163,684...15,215,615 		JBrowse link
G Axin2 axin 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:93,893,830...93,927,042
Ensembl chr10:93,899,245...93,926,231 		JBrowse link
G Bag2 BAG cochaperone 2 NOT|involved_in ISO UniProtKB:P10636 (MGI:6148635|PMID:19228967) RGD PMID:19228967 MGI:6148635 NCBI chr 9:35,970,033...35,980,677
Ensembl chr 9:35,970,033...35,980,721 		JBrowse link
G Bbs7 Bardet-Biedl syndrome 7 acts_upstream_of_or_within ISO UniProtKB:Q99496 (PMID:22302990) RGD PMID:22302990 NCBI chr 2:119,434,760...119,474,665
Ensembl chr 2:119,434,760...119,474,396 		JBrowse link
G Cbfa2t3 CBFA2/RUNX1 partner transcriptional co-repressor 3 involved_in ISO (PMID:25974097) RGD PMID:25974097 NCBI chr19:50,679,897...50,750,028
Ensembl chr19:50,680,729...50,749,610 		JBrowse link
G Chfr checkpoint with forkhead and ring finger domains acts_upstream_of_or_within ISO (MGI:5310666|PMID:22285184) RGD PMID:22285184 MGI:5310666 NCBI chr12:46,504,497...46,538,104
Ensembl chr12:46,504,497...46,538,014 		JBrowse link
G Clu clusterin involved_in ISO
IBA
IEA
ISS		 (PMID:20068069)
PMID:21873635
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:20068069 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr15:40,161,068...40,200,315
Ensembl chr15:40,174,617...40,200,315 		JBrowse link
G Cop1 COP1, E3 ubiquitin ligase involved_in ISO (PMID:19805145) RGD PMID:19805145 NCBI chr13:71,467,164...71,561,826
Ensembl chr13:71,429,961...71,538,890 		JBrowse link
G Csnk1a1 casein kinase 1, alpha 1 involved_in ISO (PMID:11955436), (PMID:19364825) RGD PMID:11955436 PMID:19364825 NCBI chr18:55,017,049...55,050,184
Ensembl chr18:55,017,055...55,049,271 		JBrowse link
G Csnk1d casein kinase 1, delta involved_in ISS
IBA
ISO		 GO_REF:0000024
PMID:21873635
(MGI:3849793|PMID:19414593)		 UniProt
RGD		 PMID:19414593 PMID:21873635 GO_REF:0000024 MGI:3849793, RGD:13792537 NCBI chr10:106,221,992...106,256,620
Ensembl chr10:106,221,992...106,256,614 		JBrowse link
G Csnk1e casein kinase 1, epsilon involved_in ISO
IBA		 (MGI:3849793|PMID:19414593)
PMID:21873635		 RGD PMID:19414593 PMID:21873635 MGI:3849793, RGD:13792537 NCBI chr 7:110,983,322...111,006,926
Ensembl chr 7:110,983,318...111,006,794 		JBrowse link
G Dab2 DAB adaptor protein 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:12805222)		 Ensembl
RGD		 PMID:12805222 GO_REF:0000107 NCBI chr 2:55,514,692...55,567,476
Ensembl chr 2:55,514,700...55,567,476 		JBrowse link
G Dda1 DET1 and DDB1 associated 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:18,156,310...18,163,938
Ensembl chr16:18,156,386...18,163,937 		JBrowse link
G Ddrgk1 DDRGK domain containing 1 involved_in ISO (PMID:23675531) RGD PMID:23675531 NCBI chr 3:117,861,916...117,882,680
Ensembl chr 3:117,861,653...117,882,680 		JBrowse link
G Det1 DET1 partner of COP1 E3 ubiquitin ligase involved_in IBA
ISO		 PMID:21873635
UniProtKB:Q8NHY2 (PMID:14739464)		 RGD PMID:14739464 PMID:21873635 RGD:13792537 NCBI chr 1:132,749,736...132,765,963
Ensembl chr 1:132,749,756...132,765,923 		JBrowse link
G Dnajb2 DnaJ heat shock protein family (Hsp40) member B2 involved_in IBA
ISO		 PMID:21873635
(PMID:15936278)		 RGD PMID:15936278 PMID:21873635 RGD:13792537 NCBI chr 9:76,731,060...76,739,278
Ensembl chr 9:76,731,065...76,739,277 		JBrowse link
G Dvl1 dishevelled segment polarity protein 1 involved_in ISO (PMID:20177058) RGD PMID:20177058 NCBI chr 5:166,456,989...166,468,733
Ensembl chr 5:166,456,686...166,468,664 		JBrowse link
G Fbxo22 F-box protein 22 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (MGI:3840749|PMID:19319192)
PMID:21873635		 RGD PMID:19319192 PMID:21873635 MGI:3840749, RGD:13792537 NCBI chr 8:55,579,906...55,595,981
Ensembl chr 8:55,579,891...55,596,148 		JBrowse link
G Gabarap GABA type A receptor-associated protein involved_in ISS
ISO		 GO_REF:0000024
(PMID:25684205)		 UniProt
RGD		 PMID:25684205 GO_REF:0000024 NCBI chr10:54,714,834...54,717,769
Ensembl chr10:54,714,198...54,717,765 		JBrowse link
G Gba glucosylceramidase beta involved_in ISO (MGI:5501380|PMID:23707074) RGD PMID:23707074 MGI:5501380 NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263 		JBrowse link
G Gclc glutamate-cysteine ligase, catalytic subunit acts_upstream_of_or_within ISO MGI:2387010 (MGI:3695876|PMID:17189825) RGD PMID:17189825 MGI:3695876 NCBI chr 8:78,629,899...78,668,547
Ensembl chr 8:78,630,127...78,668,544 		JBrowse link
G Gsk3a glycogen synthase kinase 3 alpha involved_in ISO (PMID:25897075) RGD PMID:25897075 NCBI chr 1:80,815,843...80,825,732
Ensembl chr 1:80,815,850...80,825,802 		JBrowse link
G Gsk3b glycogen synthase kinase 3 beta acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:1924375|MGI:3039600 (MGI:5437589|PMID:22660580)
(PMID:19364825), (PMID:22660580), (PMID:25897075)
GO_REF:0000107		 RGD
Ensembl		 PMID:19364825 PMID:22660580 PMID:25897075 GO_REF:0000107 MGI:5437589 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646 		JBrowse link
G Hspa1a heat shock protein family A (Hsp70) member 1A involved_in IBA
ISO		 PMID:21873635
(PMID:24613385)		 RGD PMID:24613385 PMID:21873635 RGD:13792537 NCBI chr20:3,855,104...3,859,148
Ensembl chr20:3,856,006...3,873,240 		JBrowse link
G Hspa1b heat shock protein family A (Hsp70) member 1B involved_in IBA
ISO		 PMID:21873635
(PMID:24613385)		 RGD PMID:24613385 PMID:21873635 RGD:13792537 NCBI chr20:3,870,765...3,873,221 JBrowse link
G Hspbp1 HSPA (Hsp70) binding protein 1 involved_in ISO (PMID:16831871) RGD PMID:16831871 NCBI chr 1:69,165,394...69,189,062
Ensembl chr 1:69,165,572...69,244,593 		JBrowse link
G Il33 interleukin 33 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1861437|MGI:3039600 (MGI:5437589|PMID:22660580)		 Ensembl
RGD		 PMID:22660580 GO_REF:0000107 MGI:5437589 NCBI chr 1:227,701,964...227,736,374
Ensembl chr 1:227,721,435...227,736,373 		JBrowse link
G Klhl40 kelch-like family member 40 involved_in ISO (MGI:5700633|PMID:25940086) RGD PMID:25940086 MGI:5700633 NCBI chr 8:121,441,275...121,446,806
Ensembl chr 8:121,441,287...121,446,800 		JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO (MGI:4454597|PMID:20457918) RGD PMID:20457918 MGI:4454597 NCBI chr 7:122,826,712...122,987,711
Ensembl chr 7:122,826,696...122,987,703 		JBrowse link
G Mdm2 MDM2 proto-oncogene involved_in ISO (PMID:11278372) RGD PMID:11278372 NCBI chr 7:53,290,660...53,315,205
Ensembl chr 7:53,290,664...53,314,915 		JBrowse link
G Nkd2 NKD inhibitor of WNT signaling pathway 2 involved_in ISO (PMID:20177058) RGD PMID:20177058 NCBI chr 1:29,442,898...29,470,839
Ensembl chr 1:29,441,328...29,470,821 		JBrowse link
G Nop53 NOP53 ribosome biogenesis factor involved_in ISO (PMID:25818168), (PMID:27323397)
(MGI:5897550|PMID:21804542)		 RGD PMID:21804542 PMID:25818168 PMID:27323397 MGI:5897550 NCBI chr 1:76,629,084...76,636,902
Ensembl chr 1:76,629,069...76,636,902 		JBrowse link
G Nub1 negative regulator of ubiquitin-like proteins 1 involved_in ISO (PMID:16707496) RGD PMID:16707496 NCBI chr 4:10,442,917...10,473,689
Ensembl chr 4:10,442,917...10,473,694 		JBrowse link
G Pabir1 PP2A Aalpha (PPP2R1A) and B55A (PPP2R2A) interacting phosphatase regulator 1 involved_in ISO
ISS		 (PMID:27588481)
GO_REF:0000024		 RGD
UniProt		 PMID:27588481 GO_REF:0000024 NCBI chr 1:222,114,988...222,116,294
Ensembl chr 1:222,112,591...222,116,396 		JBrowse link
G Pias1 protein inhibitor of activated STAT, 1 involved_in ISO (MGI:5487503|PMID:22406621) RGD PMID:22406621 MGI:5487503 NCBI chr 8:63,338,150...63,451,670
Ensembl chr 8:63,338,150...63,438,905 		JBrowse link
G Plk1 polo-like kinase 1 involved_in ISO
ISS
IEA		 (PMID:19473992)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:19473992 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:176,716,420...176,726,400
Ensembl chr 1:176,716,420...176,726,400 		JBrowse link
G Plk2 polo-like kinase 2 IMP RGD PMID:18723513 RGD:7241135 NCBI chr 2:41,969,176...41,974,945
Ensembl chr 2:41,969,176...41,974,947 		JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in ISO
IEA		 (PMID:17030191)
GO_REF:0000107		 RGD
Ensembl		 PMID:17030191 GO_REF:0000107 NCBI chr 7:124,639,142...124,735,027
Ensembl chr 7:124,639,142...124,658,113 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in IBA
ISO		 PMID:21873635
(MGI:5543313|PMID:23858059)		 RGD PMID:23858059 PMID:21873635 MGI:5543313, RGD:13792537 NCBI chr 1:48,688,651...49,882,520
Ensembl chr 1:48,690,556...49,882,555 		JBrowse link
G Psen1 presenilin 1 involved_in ISO (MGI:4887523|PMID:20208556) RGD PMID:20208556 MGI:4887523 NCBI chr 6:103,323,014...103,375,088
Ensembl chr 6:103,323,120...103,371,650 		JBrowse link
G Psen2 presenilin 2 involved_in ISO (MGI:4887523|PMID:20208556) RGD PMID:20208556 MGI:4887523 NCBI chr13:91,967,506...91,993,240
Ensembl chr13:91,967,983...91,993,174 		JBrowse link
G Psmd10 proteasome 26S subunit, non-ATPase 10 involved_in ISO
ISS		 (PMID:16023600)
GO_REF:0000024		 RGD
UniProt		 PMID:16023600 GO_REF:0000024 NCBI chr  X:104,656,809...104,665,126
Ensembl chr  X:104,656,812...104,665,097 		JBrowse link
G Rack1 receptor for activated C kinase 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:19785988)		 UniProt
RGD		 PMID:19785988 GO_REF:0000024 NCBI chr10:33,169,415...33,174,896
Ensembl chr10:33,169,169...33,174,975 		JBrowse link
G Rad23a RAD23 homolog A, nucleotide excision repair protein involved_in ISO (PMID:26296656) RGD PMID:26296656 NCBI chr19:23,313,563...23,320,702
Ensembl chr19:23,314,797...23,320,695 		JBrowse link
G Rbx1 ring-box 1 involved_in ISO UniProtKB:Q7L5Y6 (PMID:14739464) RGD PMID:14739464 NCBI chr 7:112,976,863...113,001,051
Ensembl chr 7:112,990,835...113,001,051 		JBrowse link
G Rchy1 ring finger and CHY zinc finger domain containing 1 involved_in ISO (PMID:19483087) RGD PMID:19483087 NCBI chr14:16,113,263...16,129,017
Ensembl chr14:16,113,224...16,129,167 		JBrowse link
G Rnf14 ring finger protein 14 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:30,131,627...30,155,686
Ensembl chr18:30,131,691...30,155,685 		JBrowse link
G Rnf144a ring finger protein 144A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:42,899,767...43,019,769
Ensembl chr 6:42,903,174...43,020,012 		JBrowse link
G Rnf144b ring finger protein 144B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:17,431,271...17,580,687
Ensembl chr17:17,432,786...17,562,760 		JBrowse link
G Rnf180 ring finger protein 180 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
(MGI:3819024|PMID:18363970), (MGI:5505713|PMID:23926250)		 RGD PMID:18363970 PMID:23926250 PMID:21873635 MGI:3819024 MGI:5505713, RGD:13792537 NCBI chr 2:36,330,285...36,511,168
Ensembl chr 2:36,330,292...36,512,614 		JBrowse link
G Rnf19a ring finger protein 19A, RBR E3 ubiquitin protein ligase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:67,425,833...67,465,214
Ensembl chr 7:67,425,837...67,465,222 		JBrowse link
G Rnf19b ring finger protein 19B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:141,406,085...141,431,380
Ensembl chr 5:141,406,118...141,431,380 		JBrowse link
G Rnf217 ring finger protein 217 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:26,016,668...26,108,736
Ensembl chr 1:26,015,728...26,108,736 		JBrowse link
G Sh3rf1 SH3 domain containing ring finger 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:28,735,522...28,901,690
Ensembl chr16:28,735,440...28,901,644 		JBrowse link
G Sh3rf2 SH3 domain containing ring finger 2 involved_in IMP
IBA
ISO		 PMID:22128169
PMID:21873635
(PMID:22128169)		 RGD PMID:22128169 PMID:22128169 PMID:21873635 RGD:13673844, RGD:13792537 NCBI chr18:34,045,715...34,148,342
Ensembl chr18:34,046,879...34,146,856 		JBrowse link
G Sh3rf3 SH3 domain containing ring finger 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:26,765,278...27,099,261
Ensembl chr20:26,765,015...27,099,257 		JBrowse link
G Sirt2 sirtuin 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5574427|PMID:24681946)		 UniProt
RGD		 PMID:24681946 GO_REF:0000024 MGI:5574427 NCBI chr 1:84,053,883...84,076,975
Ensembl chr 1:84,052,903...84,076,975 		JBrowse link
G Smad7 SMAD family member 7 involved_in ISO
IEA		 (PMID:11278251)
GO_REF:0000107		 RGD
Ensembl		 PMID:11278251 GO_REF:0000107 NCBI chr18:68,988,429...69,016,774
Ensembl chr18:68,988,429...69,016,765 		JBrowse link
G Socs5 suppressor of cytokine signaling 5 involved_in ISO (PMID:15590694) RGD PMID:15590694 NCBI chr 6:7,481,039...7,512,644
Ensembl chr 6:7,481,095...7,514,834 		JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 involved_in ISO (PMID:11146632) RGD PMID:11146632 NCBI chr10:14,850,765...14,853,046
Ensembl chr10:14,850,765...14,853,046 		JBrowse link
G Sumo1 small ubiquitin-like modifier 1 involved_in ISO (PMID:18408734) RGD PMID:18408734 NCBI chr 9:61,078,790...61,108,697
Ensembl chr 9:61,077,435...61,108,761 		JBrowse link
G Sumo2 small ubiquitin-like modifier 2 involved_in ISO (PMID:18408734) RGD PMID:18408734 NCBI chr10:100,771,941...100,784,503
Ensembl chr10:100,686,797...100,784,513 		JBrowse link
G Taf1 TATA-box binding protein associated factor 1 involved_in ISO (PMID:15053879) RGD PMID:15053879 NCBI chr  X:66,640,915...66,716,543
Ensembl chr  X:66,640,982...66,716,543 		JBrowse link
G Trib1 tribbles pseudokinase 1 involved_in IBA
ISO		 PMID:21873635
(MGI:4457446|PMID:20410507)		 RGD PMID:20410507 PMID:21873635 MGI:4457446, RGD:13792537 NCBI chr 7:91,206,579...91,213,126
Ensembl chr 7:91,206,579...91,214,731 		JBrowse link
G Trib2 tribbles pseudokinase 2 involved_in ISO (MGI:4457446|PMID:20410507) RGD PMID:20410507 MGI:4457446 NCBI chr 6:38,545,971...38,570,349
Ensembl chr 6:38,545,975...38,569,370 		JBrowse link
G Trib3 tribbles pseudokinase 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:140,809,634...140,815,230
Ensembl chr 3:140,809,043...140,814,497 		JBrowse link
G Ube2v2 ubiquitin conjugating enzyme E2 V2 IMP RGD PMID:12750002 RGD:1299567 NCBI chr11:85,304,528...85,338,430
Ensembl chr11:85,304,526...85,336,369 		JBrowse link
G Usp5 ubiquitin specific peptidase 5 involved_in ISO (PMID:19098288) RGD PMID:19098288 NCBI chr 4:157,619,643...157,634,711
Ensembl chr 4:157,619,643...157,634,711 		JBrowse link
G Vcp valosin-containing protein involved_in ISO (PMID:9452483) RGD PMID:9452483 NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571 		JBrowse link
G Zer1 zyg-11 related, cell cycle regulator involved_in ISO (PMID:31273098) RGD PMID:31273098 NCBI chr 3:13,369,688...13,397,524
Ensembl chr 3:13,369,688...13,397,420 		JBrowse link
G Zfand2a zinc finger AN1-type containing 2A acts_upstream_of_or_within ISO MGI:3664591 (MGI:3663213|PMID:16973439) RGD PMID:16973439 MGI:3663213 NCBI chr12:15,161,601...15,172,679
Ensembl chr12:15,161,639...15,172,677 		JBrowse link
G Zyg11b zyg-11 family member B, cell cycle regulator involved_in ISO (PMID:31273098) RGD PMID:31273098 NCBI chr 5:122,985,548...123,042,735
Ensembl chr 5:122,992,147...123,042,736 		JBrowse link
positive regulation of proteasomal ubiquitin-dependent protein catabolic process involved in cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plk3 polo-like kinase 3 involved_in ISS
ISO		 GO_REF:0000024
(PMID:20889502)		 UniProt
RGD		 PMID:20889502 GO_REF:0000024 NCBI chr 5:130,607,142...130,612,317
Ensembl chr 5:130,607,142...130,612,317 		JBrowse link
G Sirt2 sirtuin 2 involved_in ISO
ISS		 (PMID:24681946)
GO_REF:0000024		 RGD
UniProt		 PMID:24681946 GO_REF:0000024 NCBI chr 1:84,053,883...84,076,975
Ensembl chr 1:84,052,903...84,076,975 		JBrowse link
positive regulation of proteolysis involved in protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5if1 ATP synthase inhibitory factor subunit 1 involved_in ISO (PMID:24005319) RGD PMID:24005319 NCBI chr 5:144,738,950...144,742,668
Ensembl chr 5:144,738,950...144,742,668 		JBrowse link
G Ctsc cathepsin C involved_in IDA PMID:18307834 ParkinsonsUK-UCL PMID:18307834 RGD:8661625 NCBI chr 1:142,028,386...142,059,841
Ensembl chr 1:142,028,392...142,060,387 		JBrowse link
G Gba glucosylceramidase beta involved_in ISO (PMID:21700325)
(MGI:5141165|PMID:21700325)		 RGD PMID:21700325 MGI:5141165 NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263 		JBrowse link
G Laptm5 lysosomal protein transmembrane 5 involved_in ISO (MGI:5444793|PMID:22949502) RGD PMID:22949502 MGI:5444793 NCBI chr 5:143,087,759...143,109,807
Ensembl chr 5:143,087,759...143,109,807 		JBrowse link
G Rgn regucalcin IDA RGD PMID:1513338 RGD:9590188 NCBI chr  X:1,619,030...1,634,456
Ensembl chr  X:1,619,032...1,634,450 		JBrowse link
positive regulation of retrograde protein transport, ER to cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcap31 B-cell receptor-associated protein 31 involved_in ISO (PMID:18555783) RGD PMID:18555783 NCBI chr  X:151,397,567...151,429,666
Ensembl chr  X:151,397,576...151,428,506 		JBrowse link
G Edem1 ER degradation enhancing alpha-mannosidase like protein 1 involved_in ISO UniProtKB:Q9BV94 (PMID:24200403)
(MGI:5563002|PMID:24200403)		 RGD PMID:24200403 MGI:5563002 NCBI chr 4:141,797,631...141,829,717
Ensembl chr 4:141,797,701...141,829,717 		JBrowse link
G Edem2 ER degradation enhancing alpha-mannosidase like protein 2 involved_in ISO UniProtKB:Q92611 (PMID:24200403)
(MGI:5563002|PMID:24200403)		 RGD PMID:24200403 MGI:5563002 NCBI chr 3:144,201,604...144,227,423
Ensembl chr 3:144,201,605...144,227,485 		JBrowse link
positive regulation of transcription factor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbxw8 F-box and WD repeat domain containing 8 involved_in ISO (MGI:6148490|PMID:29153991) RGD PMID:29153991 MGI:6148490 NCBI chr12:38,426,443...38,518,712
Ensembl chr12:38,426,444...38,516,424 		JBrowse link
G Mapk8 mitogen-activated protein kinase 8 involved_in ISO (MGI:6148490|PMID:29153991) RGD PMID:29153991 MGI:6148490 NCBI chr16:8,638,897...8,721,960
Ensembl chr16:8,638,924...8,721,981 		JBrowse link
G Mapk9 mitogen-activated protein kinase 9 involved_in ISO (MGI:6148490|PMID:29153991) RGD PMID:29153991 MGI:6148490 NCBI chr10:34,169,661...34,211,138
Ensembl chr10:34,169,675...34,210,178 		JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (PMID:27457971) RGD PMID:27457971 NCBI chr 7:8,082,312...8,087,776
Ensembl chr 7:8,082,364...8,098,914 		JBrowse link
positive regulation of ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agbl4 AGBL carboxypeptidase 4 acts_upstream_of_or_within ISO MGI:5788002 (MGI:6149282|PMID:29593216) RGD PMID:29593216 MGI:6149282 NCBI chr 5:125,254,963...126,534,367
Ensembl chr 5:125,254,956...126,534,367 		JBrowse link
G Agtpbp1 ATP/GTP binding carboxypeptidase 1 acts_upstream_of_or_within ISO MGI:1857523 (MGI:6149282|PMID:29593216) RGD PMID:29593216 MGI:6149282 NCBI chr17:5,120,540...5,238,874
Ensembl chr17:5,120,609...5,238,869 		JBrowse link
G Axin1 axin 1 involved_in
acts_upstream_of_or_within		 IDA
ISO		 PMID:10228155
(MGI:3628833|PMID:16601693)		 RGD PMID:16601693 PMID:10228155 MGI:3628833, RGD:8553327 NCBI chr10:15,163,684...15,215,615
Ensembl chr10:15,163,684...15,215,615 		JBrowse link
G Ccdc22 coiled-coil domain containing 22 involved_in IBA
ISO		 PMID:21873635
(PMID:23563313)		 RGD PMID:23563313 PMID:21873635 RGD:13792537 NCBI chr  X:14,898,296...14,910,244
Ensembl chr  X:14,898,296...14,910,244 		JBrowse link
G Cdk5rap3 CDK5 regulatory subunit associated protein 3 NOT|involved_in ISS
ISO		 GO_REF:0000024
(PMID:16173922)		 UniProt
RGD		 PMID:16173922 GO_REF:0000024 NCBI chr10:81,894,393...81,903,581
Ensembl chr10:81,894,393...81,903,590 		JBrowse link
G Clu clusterin involved_in ISS
ISO		 GO_REF:0000024
(PMID:20068069)		 UniProt
RGD		 PMID:20068069 GO_REF:0000024 NCBI chr15:40,161,068...40,200,315
Ensembl chr15:40,174,617...40,200,315 		JBrowse link
G Disc1 DISC1 scaffold protein acts_upstream_of_or_within ISO (MGI:4837265|PMID:20880836) RGD PMID:20880836 MGI:4837265 NCBI chr19:53,014,201...53,223,617
Ensembl chr19:53,014,616...53,219,778 		JBrowse link
G Egf epidermal growth factor involved_in ISO (MGI:4887523|PMID:20208556) RGD PMID:20208556 MGI:4887523 NCBI chr 2:218,219,408...218,302,370
Ensembl chr 2:218,219,415...218,302,064 		JBrowse link
G Fbxo22 F-box protein 22 acts_upstream_of_or_within ISO (MGI:3840749|PMID:19319192) RGD PMID:19319192 MGI:3840749 NCBI chr 8:55,579,906...55,595,981
Ensembl chr 8:55,579,891...55,596,148 		JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 involved_in ISO
ISS		 (PMID:20208556), (PMID:27238018)
(MGI:6282935|PMID:27238018)
GO_REF:0000024		 RGD
UniProt		 PMID:20208556 PMID:27238018 GO_REF:0000024 MGI:6282935 NCBI chr 2:170,150,552...170,310,698
Ensembl chr 2:170,149,694...170,309,941 		JBrowse link
G L3mbtl3 L3MBTL histone methyl-lysine binding protein 3 involved_in ISO (PMID:29691401) RGD PMID:29691401 NCBI chr 1:18,988,763...19,089,247
Ensembl chr 1:18,990,618...19,089,263 		JBrowse link
G Laptm5 lysosomal protein transmembrane 5 involved_in ISO (MGI:3803048|PMID:18619870), (MGI:6478861|PMID:24638062) RGD PMID:18619870 PMID:24638062 MGI:3803048 MGI:6478861 NCBI chr 5:143,087,759...143,109,807
Ensembl chr 5:143,087,759...143,109,807 		JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (PMID:21241890) RGD PMID:21241890 NCBI chr 1:230,631,303...230,696,754
Ensembl chr 1:230,630,338...230,696,838 		JBrowse link
G Ptk2 protein tyrosine kinase 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5306293|PMID:18206965)		 UniProt
RGD		 PMID:18206965 GO_REF:0000024 MGI:5306293 NCBI chr 7:105,126,725...105,331,848
Ensembl chr 7:105,126,728...105,331,783 		JBrowse link
G Ptk2b protein tyrosine kinase 2 beta involved_in ISS
ISO		 GO_REF:0000024
(MGI:4453113|PMID:19880522)		 UniProt
RGD		 PMID:19880522 GO_REF:0000024 MGI:4453113 NCBI chr15:40,360,722...40,481,235
Ensembl chr15:40,360,723...40,481,282 		JBrowse link
G Rnf139 ring finger protein 139 involved_in ISO (PMID:25239945) RGD PMID:25239945 NCBI chr 7:90,439,726...90,450,911
Ensembl chr 7:90,436,621...90,488,009 		JBrowse link
G Smurf1 SMAD specific E3 ubiquitin protein ligase 1 involved_in ISO (PMID:21454619) RGD PMID:21454619 NCBI chr12:9,635,009...9,726,520
Ensembl chr12:9,635,025...9,726,519 		JBrowse link
G Sumo3 small ubiquitin-like modifier 3 acts_upstream_of_or_within ISO (MGI:3813414|PMID:18644859) RGD PMID:18644859 MGI:3813414 NCBI chr20:11,010,140...11,020,850
Ensembl chr20:11,007,148...11,020,877
Ensembl chr20:11,007,148...11,020,877 		JBrowse link
G Trim67 tripartite motif-containing 67 acts_upstream_of_or_within ISO (MGI:5427306|PMID:22337885) RGD PMID:22337885 MGI:5427306 NCBI chr19:52,763,991...52,805,906
Ensembl chr19:52,764,387...52,800,422 		JBrowse link
G Vcp valosin-containing protein IMP RGD PMID:16103111 RGD:1599730 NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571 		JBrowse link
prenylated protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pcyox1 prenylcysteine oxidase 1 involved_in ISO
IBA		 (PMID:10585463)
PMID:21873635		 RGD PMID:10585463 PMID:21873635 RGD:13792537 NCBI chr 4:118,832,114...118,842,951
Ensembl chr 4:118,830,638...118,842,951 		JBrowse link
G Pcyox1l prenylcysteine oxidase 1 like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:55,150,637...55,161,334
Ensembl chr18:55,150,650...55,161,327 		JBrowse link
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO (MGI:2137968|PMID:11399759) RGD PMID:11399759 MGI:2137968 NCBI chr 5:134,627,218...134,660,360
Ensembl chr 5:134,627,229...134,660,110 		JBrowse link
proteasomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ate1 arginyltransferase 1 acts_upstream_of_or_within ISO (PMID:25970626) RGD PMID:25970626 NCBI chr 1:184,961,548...185,081,112
Ensembl chr 1:184,963,562...185,080,908 		JBrowse link
G Bag6 BAG cochaperone 6 involved_in ISO
ISS		 (PMID:26565908)
GO_REF:0000024		 RGD
UniProt		 PMID:26565908 GO_REF:0000024 NCBI chr20:3,675,938...3,690,414
Ensembl chr20:3,675,938...3,688,657 		JBrowse link
G Cul4b cullin 4B acts_upstream_of_or_within ISO (PMID:25970626) RGD PMID:25970626 NCBI chr  X:117,287,481...117,326,688
Ensembl chr  X:117,287,484...117,326,688 		JBrowse link
G Ddb1 damage-specific DNA binding protein 1 acts_upstream_of_or_within ISO (PMID:25970626) RGD PMID:25970626 NCBI chr 1:207,252,890...207,278,685
Ensembl chr 1:207,252,890...207,278,676 		JBrowse link
G Ddi1 DNA-damage inducible 1 homolog 1 involved_in ISO
ISS		 (PMID:29290612)
GO_REF:0000024		 RGD
UniProt		 PMID:29290612 GO_REF:0000024 NCBI chr 8:3,596,658...3,598,505
Ensembl chr 8:3,595,149...3,598,533 		JBrowse link
G Ddi2 DNA damage inducible 1 homolog 2 involved_in ISO (PMID:29290612) RGD PMID:29290612 NCBI chr 5:153,989,596...154,035,342
Ensembl chr 5:153,995,589...154,035,283 		JBrowse link
G Dtx4 deltex E3 ubiquitin ligase 4 involved_in ISO (PMID:35793002) RGD PMID:35793002 NCBI chr 1:209,457,719...209,545,163
Ensembl chr 1:209,460,735...209,492,818 		JBrowse link
G Fbxo44 F-box protein 44 acts_upstream_of_or_within ISO (PMID:25970626) RGD PMID:25970626 NCBI chr 5:158,583,363...158,592,510
Ensembl chr 5:158,583,366...158,592,363 		JBrowse link
G Marchf6 membrane associated ring-CH-type finger 6 involved_in ISO (PMID:15673284) RGD PMID:15673284 NCBI chr 2:82,455,686...82,532,917
Ensembl chr 2:82,455,689...82,532,910 		JBrowse link
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 involved_in IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(MGI:3785131|PMID:18227153), (MGI:5303043|PMID:21874017)		 Ensembl
UniProt
RGD		 PMID:18227153 PMID:21874017 GO_REF:0000024 GO_REF:0000107 MGI:3785131 MGI:5303043 NCBI chr10:83,728,348...83,735,562
Ensembl chr10:83,728,318...83,735,705 		JBrowse link
G Nub1 negative regulator of ubiquitin-like proteins 1 acts_upstream_of_or_within ISO (MGI:5781275|PMID:26797281) RGD PMID:26797281 MGI:5781275 NCBI chr 4:10,442,917...10,473,689
Ensembl chr 4:10,442,917...10,473,694 		JBrowse link
G Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 involved_in ISO (PMID:15901672) RGD PMID:15901672 NCBI chr18:59,986,187...59,990,174
Ensembl chr18:59,986,017...59,992,429 		JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO MGI:2447704 (MGI:3575390|PMID:14627652) RGD PMID:14627652 MGI:3575390 NCBI chr10:47,795,709...47,825,715
Ensembl chr10:47,795,709...47,825,714 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO (PMID:19725078) RGD PMID:19725078 NCBI chr 1:48,688,651...49,882,520
Ensembl chr 1:48,690,556...49,882,555 		JBrowse link
G Prpf19 pre-mRNA processing factor 19 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5586800|PMID:17349974)
(PMID:17349974)		 UniProt
RGD		 PMID:17349974 GO_REF:0000024 MGI:5586800 NCBI chr 1:207,541,582...207,552,664
Ensembl chr 1:207,541,595...207,552,662 		JBrowse link
G Psma8 proteasome 20S subunit alpha 8 involved_in ISO (MGI:6362274|PMID:31358751) RGD PMID:31358751 MGI:6362274 NCBI chr18:5,863,594...5,928,226
Ensembl chr18:5,863,608...5,928,226 		JBrowse link
G Psmb2 proteasome 20S subunit beta 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:138,970,564...139,002,715
Ensembl chr 5:138,970,533...139,021,137 		JBrowse link
G Rnf41 ring finger protein 41 involved_in ISO (PMID:18541373) RGD PMID:18541373 NCBI chr 7:838,160...876,869
Ensembl chr 7:838,203...865,511 		JBrowse link
G Sco1 synthesis of cytochrome C oxidase 1 acts_upstream_of ISO MGI:2176228|MGI:5758867 (MGI:5643882|PMID:25683716) RGD PMID:25683716 MGI:5643882 NCBI chr10:51,744,656...51,757,246
Ensembl chr10:51,744,656...51,757,237 		JBrowse link
G Socs6 suppressor of cytokine signaling 6 acts_upstream_of_or_within ISO (PMID:20007709) RGD PMID:20007709 NCBI chr18:82,111,866...82,139,193
Ensembl chr18:82,111,827...82,139,219 		JBrowse link
G Trim21 tripartite motif-containing 21 involved_in ISO (PMID:36359729) RGD PMID:36359729 NCBI chr 1:156,964,896...156,987,504
Ensembl chr 1:156,964,913...156,987,440 		JBrowse link
G Ufd1 ubiquitin recognition factor in ER associated degradation 1 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr11:82,161,618...82,185,107
Ensembl chr11:82,161,619...82,185,087 		JBrowse link
G Vcp valosin-containing protein involved_in ISS
ISO		 GO_REF:0000024
(PMID:26565908)		 UniProt
RGD		 PMID:26565908 GO_REF:0000024 NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571 		JBrowse link
G Vhl von Hippel-Lindau tumor suppressor acts_upstream_of_or_within ISO (MGI:3818351|PMID:17981124) RGD PMID:17981124 MGI:3818351 NCBI chr 4:146,772,483...146,779,376
Ensembl chr 4:146,772,468...146,779,377 		JBrowse link
proteasomal ubiquitin-independent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Enc1 ectodermal-neural cortex 1 involved_in ISO
IBA		 (PMID:19424503)
PMID:21873635		 RGD PMID:19424503 PMID:21873635 RGD:13792537 NCBI chr 2:28,550,670...28,562,591
Ensembl chr 2:28,550,464...28,562,713 		JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:19424503)		 UniProt
RGD		 PMID:19424503 GO_REF:0000024 NCBI chr 3:60,594,239...60,621,785
Ensembl chr 3:60,594,242...60,621,737 		JBrowse link
G Psme4 proteasome activator subunit 4 involved_in IBA
ISO		 PMID:21873635
(MGI:5494329|PMID:23706739)		 RGD PMID:23706739 PMID:21873635 MGI:5494329, RGD:13792537 NCBI chr14:104,505,716...104,609,410
Ensembl chr14:104,505,716...104,609,408 		JBrowse link
proteasome-mediated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07012426.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 2:180,190,557...180,217,844 JBrowse link
G AABR07034438.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr11:68,398,182...68,460,080 JBrowse link
G AABR07041109.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr  X:111,788,220...111,788,672 JBrowse link
G Agap3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 acts_upstream_of_or_within ISO (MGI:3616374|PMID:16461359) RGD PMID:16461359 MGI:3616374 NCBI chr 4:10,674,064...10,724,848
Ensembl chr 4:10,674,064...10,725,244 		JBrowse link
G Akt1 AKT serine/threonine kinase 1 acts_upstream_of ISO (MGI:3589701|PMID:15937334) RGD PMID:15937334 MGI:3589701 NCBI chr 6:131,713,716...131,735,319
Ensembl chr 6:131,713,720...131,733,921 		JBrowse link
G Ambra1 autophagy and beclin 1 regulator 1 involved_in ISO (PMID:33854232), (PMID:33854235), (PMID:33854239) RGD PMID:33854232 PMID:33854235 PMID:33854239 NCBI chr 3:77,700,936...77,890,221
Ensembl chr 3:77,700,936...77,890,221 		JBrowse link
G Ankrd9 ankyrin repeat domain 9 involved_in ISO (PMID:30293565) RGD PMID:30293565 NCBI chr 6:130,001,914...130,008,792
Ensembl chr 6:129,998,486...130,008,923 		JBrowse link
G Appbp2 amyloid beta precursor protein binding protein 2 involved_in ISS
IBA
ISO		 GO_REF:0000024
PMID:21873635
(PMID:26138980)		 UniProt
RGD		 PMID:26138980 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:70,057,774...70,099,877
Ensembl chr10:70,057,774...70,099,835 		JBrowse link
G Armc8 armadillo repeat containing 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:100,036,946...100,131,544
Ensembl chr 8:100,036,946...100,131,520 		JBrowse link
G Arrb1 arrestin, beta 1 involved_in ISO (PMID:15878855) RGD PMID:15878855 NCBI chr 1:153,837,964...153,912,111
Ensembl chr 1:153,838,078...153,904,061 		JBrowse link
G Arrb2 arrestin, beta 2 involved_in ISO (PMID:15878855) RGD PMID:15878855 NCBI chr10:55,146,887...55,154,854
Ensembl chr10:55,146,818...55,154,850 		JBrowse link
G Asb2 ankyrin repeat and SOCS box-containing 2 involved_in ISO
ISS		 (PMID:21119685)
(MGI:5510317|PMID:23632887), (MGI:6718235|PMID:29374072)
GO_REF:0000024		 RGD
UniProt		 PMID:21119685 PMID:23632887 PMID:29374072 GO_REF:0000024 MGI:5510317 MGI:6718235 NCBI chr 6:122,474,754...122,511,014
Ensembl chr 6:122,474,756...122,510,854 		JBrowse link
G Atxn3 ataxin 3 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5318000|PMID:21855799)		 UniProt
RGD		 PMID:21855799 GO_REF:0000024 MGI:5318000 NCBI chr 6:121,072,228...121,107,902
Ensembl chr 6:121,074,448...121,107,902 		JBrowse link
G Aurka aurora kinase A acts_upstream_of ISO (MGI:3697244|PMID:17060449) RGD PMID:17060449 MGI:3697244 NCBI chr 3:161,128,309...161,144,524
Ensembl chr 3:161,128,313...161,144,390 		JBrowse link
G Bag6 BAG cochaperone 6 involved_in ISO (MGI:5780912|PMID:26692333) RGD PMID:26692333 MGI:5780912 NCBI chr20:3,675,938...3,690,414
Ensembl chr20:3,675,938...3,688,657 		JBrowse link
G Bfar bifunctional apoptosis regulator involved_in IBA
ISO		 PMID:21873635
(PMID:21068390)		 RGD PMID:21068390 PMID:21873635 RGD:13792537 NCBI chr10:1,552,019...1,585,040
Ensembl chr10:1,552,072...1,585,038 		JBrowse link
G Birc2 baculoviral IAP repeat-containing 2 involved_in ISO (PMID:11907583) RGD PMID:11907583 NCBI chr 8:4,968,856...4,989,325
Ensembl chr 8:4,968,842...4,988,732 		JBrowse link
G Bmal1 basic helix-loop-helix ARNT like 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5495336|PMID:23395176)		 UniProt
RGD		 PMID:23395176 GO_REF:0000024 MGI:5495336 NCBI chr 1:167,331,756...167,430,235
Ensembl chr 1:167,331,633...167,430,231 		JBrowse link
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase involved_in ISO (PMID:15917222) RGD PMID:15917222 NCBI chr 1:244,210,299...244,380,126
Ensembl chr 1:244,210,314...244,376,721 		JBrowse link
G Cd2ap CD2-associated protein IDA RGD PMID:15001553 RGD:1302417 NCBI chr 9:18,086,744...18,182,744
Ensembl chr 9:18,086,984...18,182,199 		JBrowse link
G Cdc34 cell division cycle 34, ubiqiutin conjugating enzyme involved_in ISO (PMID:10373550), (PMID:20347421) RGD PMID:10373550 PMID:20347421 NCBI chr 7:10,017,588...10,023,586
Ensembl chr 7:10,017,588...10,023,186 		JBrowse link
G Clec16a C-type lectin domain containing 16A acts_upstream_of ISO MGI:5648633 (MGI:5603233|PMID:24949970) RGD PMID:24949970 MGI:5603233 NCBI chr10:4,927,804...5,123,749
Ensembl chr10:4,928,030...5,123,578 		JBrowse link
G Clock clock circadian regulator involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:5495336|PMID:23395176)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:23395176 GO_REF:0000024 GO_REF:0000107 MGI:5495336 NCBI chr14:31,908,542...31,992,673
Ensembl chr14:31,908,566...31,990,400 		JBrowse link
G Cop1 COP1, E3 ubiquitin ligase involved_in ISO
IBA		 (PMID:14739464)
PMID:21873635		 RGD PMID:14739464 PMID:21873635 RGD:13792537 NCBI chr13:71,467,164...71,561,826
Ensembl chr13:71,429,961...71,538,890 		JBrowse link
G Crbn cereblon involved_in ISO
ISS		 (PMID:20223979)
GO_REF:0000024		 RGD
UniProt		 PMID:20223979 GO_REF:0000024 NCBI chr 4:139,701,154...139,719,949
Ensembl chr 4:139,701,094...139,719,938 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in ISO
IEA		 (PMID:29374064)
GO_REF:0000107		 RGD
Ensembl		 PMID:29374064 GO_REF:0000107 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Cul1 cullin 1 involved_in ISO (PMID:15145941), (PMID:34480022) RGD PMID:15145941 PMID:34480022 NCBI chr 4:76,551,952...76,625,830
Ensembl chr 4:76,551,983...76,627,980 		JBrowse link
G Cul3 cullin 3 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
(PMID:19261606), (PMID:19782033), (PMID:20389280), (PMID:25684205)
MGI:1343085 (MGI:4836774|PMID:20811152)		 UniProt
RGD		 PMID:19261606 PMID:19782033 PMID:20389280 PMID:20811152 PMID:25684205 GO_REF:0000024 MGI:4836774 NCBI chr 9:81,592,641...81,670,428
Ensembl chr 9:81,592,641...81,670,462 		JBrowse link
G Cul4a cullin 4A involved_in
acts_upstream_of_or_within		 ISO (PMID:14739464)
(MGI:3777067|PMID:16467204)		 RGD PMID:14739464 PMID:16467204 MGI:3777067 NCBI chr16:76,385,298...76,422,316
Ensembl chr16:76,384,546...76,422,330 		JBrowse link
G Dcaf11 DDB1 and CUL4 associated factor 11 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:29,046,744...29,057,450
Ensembl chr15:29,046,826...29,057,669 		JBrowse link
G Ddb1 damage-specific DNA binding protein 1 involved_in ISO
IEA
ISS
IBA		 (PMID:14739464), (PMID:20223979)
GO_REF:0000104
GO_REF:0000024
PMID:21873635		 RGD
UniProt		 PMID:14739464 PMID:20223979 PMID:21873635 GO_REF:0000024 GO_REF:0000104, RGD:13792537 NCBI chr 1:207,252,890...207,278,685
Ensembl chr 1:207,252,890...207,278,676 		JBrowse link
G Ddit3 DNA-damage inducible transcript 3 involved_in ISO
ISS		 (PMID:17872950)
GO_REF:0000024		 RGD
UniProt		 PMID:17872950 GO_REF:0000024 NCBI chr 7:63,115,645...63,121,203
Ensembl chr 7:63,116,380...63,121,201 		JBrowse link
G Derl1 derlin 1 involved_in ISO (MGI:5780912|PMID:26692333) RGD PMID:26692333 MGI:5780912 NCBI chr 7:89,404,413...89,427,095
Ensembl chr 7:89,404,417...89,427,145 		JBrowse link
G Dnajb2 DnaJ heat shock protein family (Hsp40) member B2 involved_in ISO (PMID:21625540) RGD PMID:21625540 NCBI chr 9:76,731,060...76,739,278
Ensembl chr 9:76,731,065...76,739,277 		JBrowse link
G Dtl denticleless E3 ubiquitin protein ligase homolog involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:103,115,810...103,155,029
Ensembl chr13:103,117,186...103,154,890 		JBrowse link
G Edem3 ER degradation enhancing alpha-mannosidase like protein 3 acts_upstream_of_or_within ISO (MGI:3654428|PMID:16431915) RGD PMID:16431915 MGI:3654428 NCBI chr13:63,858,282...63,920,538
Ensembl chr13:63,858,716...63,920,523 		JBrowse link
G Epm2a EPM2A glucan phosphatase, laforin acts_upstream_of_or_within ISO MGI:2182627 (MGI:5607479|PMID:24914213) RGD PMID:24914213 MGI:5607479 NCBI chr 1:5,727,111...5,845,338
Ensembl chr 1:5,727,066...5,920,555 		JBrowse link
G Ercc8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in IBA
ISO		 PMID:21873635
(PMID:16751180)		 RGD PMID:16751180 PMID:21873635 RGD:13792537 NCBI chr 2:39,647,393...39,686,229
Ensembl chr 2:39,647,452...39,684,859 		JBrowse link
G Faf2 Fas associated factor family member 2 involved_in ISO (MGI:5780912|PMID:26692333) RGD PMID:26692333 MGI:5780912 NCBI chr17:9,947,216...9,989,474
Ensembl chr17:9,947,220...9,989,485 		JBrowse link
G Fbxl17 F-box and leucine-rich repeat protein 17 involved_in ISO (PMID:30190310) RGD PMID:30190310 NCBI chr 9:102,780,573...103,206,755
Ensembl chr 9:102,782,440...103,208,950 		JBrowse link
G Fbxl19 F-box and leucine-rich repeat protein 19 acts_upstream_of_or_within
involved_in		 ISO MGI:1861437|MGI:1924375 (MGI:5437589|PMID:22660580)
(PMID:23512198)
(PMID:22660580)		 RGD PMID:22660580 PMID:23512198 MGI:5437589 NCBI chr 1:182,356,899...182,380,839
Ensembl chr 1:182,360,830...182,380,083 		JBrowse link
G Fbxl22 F-box and leucine-rich repeat protein 22 acts_upstream_of_or_within ISO (PMID:22972877) RGD PMID:22972877 NCBI chr 8:67,069,998...67,076,685
Ensembl chr 8:67,069,998...67,076,685 		JBrowse link
G Fbxl3 F-box and leucine-rich repeat protein 3 involved_in ISO (MGI:3715674|PMID:17462724) RGD PMID:17462724 MGI:3715674 NCBI chr15:79,906,795...79,926,678
Ensembl chr15:79,906,795...79,927,867 		JBrowse link
G Fbxo22 F-box protein 22 acts_upstream_of ISO (MGI:3840749|PMID:19319192) RGD PMID:19319192 MGI:3840749 NCBI chr 8:55,579,906...55,595,981
Ensembl chr 8:55,579,891...55,596,148 		JBrowse link
G Fbxo45 F-box protein 45 involved_in IBA
ISO		 PMID:21873635
(MGI:4452423|PMID:19996097)		 RGD PMID:19996097 PMID:21873635 MGI:4452423, RGD:13792537 NCBI chr11:68,551,430...68,567,053
Ensembl chr11:68,551,122...68,566,800 		JBrowse link
G Fbxo7 F-box protein 7 involved_in ISO (PMID:36646384) RGD PMID:36646384 NCBI chr 7:17,809,224...17,837,549
Ensembl chr 7:17,809,231...17,837,530 		JBrowse link
G Fbxo9 f-box protein 9 involved_in ISO (PMID:34480022) RGD PMID:34480022 NCBI chr 8:78,958,482...78,984,015
Ensembl chr 8:78,958,483...78,983,949 		JBrowse link
G Fbxw11 F-box and WD repeat domain containing 11 involved_in ISO (PMID:20347421) RGD PMID:20347421 NCBI chr10:17,232,735...17,330,584
Ensembl chr10:17,227,181...17,330,571 		JBrowse link
G Fbxw5 F-box and WD repeat domain containing 5 involved_in ISO
ISS		 (PMID:18381890)
GO_REF:0000024		 RGD
UniProt		 PMID:18381890 GO_REF:0000024 NCBI chr 3:8,322,543...8,327,092
Ensembl chr 3:8,322,543...8,327,092 		JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 involved_in IBA
ISO
ISS		 PMID:21873635
(PMID:35395208)
GO_REF:0000024
(PMID:25897075)		 RGD
UniProt		 PMID:25897075 PMID:35395208 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 2:170,150,552...170,310,698
Ensembl chr 2:170,149,694...170,309,941 		JBrowse link
G Fem1b fem-1 homolog B involved_in ISS
ISO		 GO_REF:0000024
(PMID:24076122)		 UniProt
RGD		 PMID:24076122 GO_REF:0000024 NCBI chr 8:63,265,301...63,278,577
Ensembl chr 8:63,265,301...63,278,577 		JBrowse link
G Fem1c fem-1 homolog C involved_in ISO (PMID:26138980) RGD PMID:26138980 NCBI chr18:39,232,900...39,258,692
Ensembl chr18:39,232,900...39,258,692 		JBrowse link
G Gba glucosylceramidase beta acts_upstream_of_or_within ISO (MGI:5501380|PMID:23707074) RGD PMID:23707074 MGI:5501380 NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263 		JBrowse link
G Gid4 GID complex subunit 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:45,221,210...45,247,627
Ensembl chr10:45,245,754...45,247,621
Ensembl chr10:45,245,754...45,247,621 		JBrowse link
G Gid8 GID complex subunit 8 homolog involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:167,826,006...167,836,759
Ensembl chr 3:167,826,060...167,834,814 		JBrowse link
G Gsk3a glycogen synthase kinase 3 alpha involved_in ISS
ISO		 GO_REF:0000024
(MGI:5514334|PMID:16543145)		 UniProt
RGD		 PMID:16543145 GO_REF:0000024 MGI:5514334 NCBI chr 1:80,815,843...80,825,732
Ensembl chr 1:80,815,850...80,825,802 		JBrowse link
G Hectd1 HECT domain E3 ubiquitin protein ligase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:69,181,429...69,267,803
Ensembl chr 6:69,181,436...69,268,053 		JBrowse link
G Hectd3 HECT domain E3 ubiquitin protein ligase 3 involved_in ISO
IBA		 (PMID:18194665)
PMID:21873635		 RGD PMID:18194665 PMID:21873635 RGD:13792537 NCBI chr 5:130,469,841...130,479,802
Ensembl chr 5:130,469,840...130,478,561 		JBrowse link
G Herc2 HECT and RLD domain containing E3 ubiquitin protein ligase 2 involved_in ISO (MGI:5780912|PMID:26692333) RGD PMID:26692333 MGI:5780912 NCBI chr 1:106,904,789...107,110,997
Ensembl chr 1:106,880,084...107,108,134 		JBrowse link
G Ifi27 interferon, alpha-inducible protein 27 involved_in ISO (PMID:27194766) RGD PMID:27194766 NCBI chr 6:122,590,461...122,596,996
Ensembl chr 6:122,590,472...122,779,294 		JBrowse link
G Itch itchy E3 ubiquitin protein ligase involved_in ISO
IBA		 (PMID:22009753)
PMID:21873635		 RGD PMID:22009753 PMID:21873635 RGD:13792537 NCBI chr 3:143,642,348...143,733,745
Ensembl chr 3:143,645,637...143,733,543 		JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISO (PMID:18397884) RGD PMID:18397884 NCBI chr 1:202,895,751...202,903,178
Ensembl chr 1:202,895,751...202,903,458 		JBrowse link
G Kat7 lysine acetyltransferase 7 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr10:80,221,519...80,255,590
Ensembl chr10:80,221,524...80,255,567 		JBrowse link
G Kbtbd6 kelch repeat and BTB domain containing 6 involved_in ISO (PMID:25684205) RGD PMID:25684205 NCBI chr15:54,848,285...54,850,042
Ensembl chr15:54,848,446...54,850,453 		JBrowse link
G Kbtbd7 kelch repeat and BTB domain containing 7 involved_in ISO (PMID:25684205) RGD PMID:25684205 NCBI chr15:54,806,878...54,811,457
Ensembl chr15:54,806,873...54,811,687 		JBrowse link
G Kctd10 potassium channel tetramerization domain containing 10 involved_in IBA
ISS		 PMID:21873635
GO_REF:0000024		 UniProt PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr12:42,230,159...42,248,792
Ensembl chr12:42,230,269...42,248,783 		JBrowse link
G Kctd13 potassium channel tetramerization domain containing 13 involved_in ISO (PMID:19782033) RGD PMID:19782033 NCBI chr 1:181,534,534...181,552,843
Ensembl chr 1:181,534,515...181,552,881 		JBrowse link
G Kctd17 potassium channel tetramerization domain containing 17 involved_in ISO
IBA		 (PMID:25270598)
PMID:21873635		 RGD PMID:25270598 PMID:21873635 RGD:13792537 NCBI chr 7:109,979,060...110,009,091
Ensembl chr 7:109,979,060...110,008,927 		JBrowse link
G Kctd2 potassium channel tetramerization domain containing 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:100,663,013...100,674,756
Ensembl chr10:100,662,884...100,674,336 		JBrowse link
G Kctd5 potassium channel tetramerization domain containing 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:13,079,216...13,105,197
Ensembl chr10:13,079,214...13,105,209 		JBrowse link
G Kif14 kinesin family member 14 involved_in ISO (PMID:24854087) RGD PMID:24854087 NCBI chr13:47,926,975...47,990,598
Ensembl chr13:47,927,044...47,989,164 		JBrowse link
G Klhdc2 kelch domain containing 2 involved_in ISO
ISS		 (PMID:26138980)
GO_REF:0000024		 RGD
UniProt		 PMID:26138980 GO_REF:0000024 NCBI chr 6:87,777,183...87,791,609
Ensembl chr 6:87,777,183...87,804,187 		JBrowse link
G Klhdc3 kelch domain containing 3 involved_in ISO
ISS		 (PMID:26138980)
GO_REF:0000024		 RGD
UniProt		 PMID:26138980 GO_REF:0000024 NCBI chr 9:14,302,345...14,308,736
Ensembl chr 9:14,302,354...14,308,736 		JBrowse link
G Klhl20 kelch-like family member 20 involved_in ISO
IBA
ISS		 (PMID:20389280)
PMID:21873635
GO_REF:0000024		 RGD
UniProt		 PMID:20389280 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr13:73,363,451...73,408,346
Ensembl chr13:73,363,455...73,408,337 		JBrowse link
G Klhl22 kelch-like family member 22 involved_in ISS
IBA
ISO		 GO_REF:0000024
PMID:21873635
(PMID:29769719)		 UniProt
RGD		 PMID:29769719 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr11:83,190,891...83,231,746
Ensembl chr11:83,190,891...83,231,770 		JBrowse link
G Klhl40 kelch-like family member 40 acts_upstream_of ISO (MGI:5586592|PMID:24960163) RGD PMID:24960163 MGI:5586592 NCBI chr 8:121,441,275...121,446,806
Ensembl chr 8:121,441,287...121,446,800 		JBrowse link
G Klhl42 kelch-like family, member 42 involved_in ISO (PMID:19261606) RGD PMID:19261606 NCBI chr 4:179,999,655...180,027,283
Ensembl chr 4:180,004,580...180,027,283 		JBrowse link
G Maea macrophage erythroblast attacher, E3 ubiquitin ligase involved_in IBA
IEA		 PMID:21873635
GO_REF:0000002		 InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr14:77,357,261...77,390,683
Ensembl chr14:77,357,264...77,390,671 		JBrowse link
G Marchf6 membrane associated ring-CH-type finger 6 involved_in ISO (PMID:24449766) RGD PMID:24449766 NCBI chr 2:82,455,686...82,532,917
Ensembl chr 2:82,455,689...82,532,910 		JBrowse link
G Mta1 metastasis associated 1 involved_in ISO
ISS		 (PMID:19805145)
GO_REF:0000024		 RGD
UniProt		 PMID:19805145 GO_REF:0000024 NCBI chr 6:132,178,608...132,217,641
Ensembl chr 6:132,178,853...132,217,641 		JBrowse link
G Mtm1 myotubularin 1 acts_upstream_of ISO MGI:2450997 (MGI:5510937|PMID:23695157) RGD PMID:23695157 MGI:5510937 NCBI chr 6:488,691...506,964
Ensembl chr 6:488,969...506,860 		JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within ISO MGI:1934018 (MGI:4367540|PMID:19386237) RGD PMID:19386237 MGI:4367540 NCBI chr10:86,001,545...86,009,049
Ensembl chr10:86,001,566...86,008,972 		JBrowse link
G Nedd4l NEDD4 like E3 ubiquitin protein ligase involved_in ISO (PMID:21463633) RGD PMID:21463633 NCBI chr18:58,393,759...58,726,709
Ensembl chr18:58,393,509...58,723,137 		JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 involved_in ISO
ISS		 (PMID:15983046)
GO_REF:0000024		 RGD
UniProt		 PMID:15983046 GO_REF:0000024 NCBI chr 3:60,594,239...60,621,785
Ensembl chr 3:60,594,242...60,621,737 		JBrowse link
G Nhlrc1 NHL repeat containing E3 ubiquitin protein ligase 1 involved_in
acts_upstream_of_or_within		 IBA
ISO
ISS		 PMID:21873635
MGI:3808349 (MGI:5607479|PMID:24914213)
GO_REF:0000024
(PMID:15930137)		 RGD
UniProt		 PMID:15930137 PMID:24914213 PMID:21873635 GO_REF:0000024 MGI:5607479, RGD:13792537 NCBI chr17:17,674,375...17,675,565
Ensembl chr17:17,674,319...17,677,148 		JBrowse link
G Nhlrc3 NHL repeat containing 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:137,527,843...137,542,258
Ensembl chr 2:137,530,012...137,534,879
Ensembl chr 2:137,530,012...137,534,879 		JBrowse link
G Nsfl1c NSFL1 cofactor involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:139,978,306...140,002,876
Ensembl chr 3:139,978,301...140,002,870 		JBrowse link
G Otud5 OTU deubiquitinase 5 acts_upstream_of_or_within ISO MGI:2386448|MGI:5752247 (MGI:5621075|PMID:25470037) RGD PMID:25470037 MGI:5621075 NCBI chr  X:14,626,173...14,659,331
Ensembl chr  X:14,626,164...14,659,573 		JBrowse link
G Pbk PDZ binding kinase acts_upstream_of ISO MGI:5293435 (MGI:5293269|PMID:21715333) RGD PMID:21715333 MGI:5293269 NCBI chr15:40,022,873...40,034,014
Ensembl chr15:40,023,002...40,034,014 		JBrowse link
G Pcbp2 poly(rC) binding protein 2 involved_in ISO (PMID:19881509) RGD PMID:19881509 NCBI chr 7:133,605,480...133,631,312
Ensembl chr 7:133,605,573...133,629,863 		JBrowse link
G Pcnp PEST proteolytic signal containing nuclear protein involved_in ISS
IEA
ISO
IBA		 GO_REF:0000024
GO_REF:0000107
(PMID:14741369)
PMID:21873635		 HGNC-UCL
Ensembl
RGD		 PMID:14741369 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr11:44,592,766...44,607,372
Ensembl chr11:44,592,742...44,607,348 		JBrowse link
G Peli1 pellino E3 ubiquitin protein ligase 1 involved_in ISO (PMID:29883609) RGD PMID:29883609 NCBI chr14:95,254,274...95,309,168
Ensembl chr14:95,254,589...95,308,285 		JBrowse link
G Pja2 praja ring finger ubiquitin ligase 2 involved_in ISO (PMID:33934390) RGD PMID:33934390 NCBI chr 9:103,956,678...104,006,763
Ensembl chr 9:103,956,678...104,006,783 		JBrowse link
G Plaa phospholipase A2, activating protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:109,428,600...109,460,373
Ensembl chr 5:109,428,265...109,460,282 		JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (PMID:22406621) RGD PMID:22406621 NCBI chr 8:58,627,347...58,661,927
Ensembl chr 8:58,628,837...58,658,971 		JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO MGI:1856217 (MGI:3574149|PMID:15748170) RGD PMID:15748170 MGI:3574149 NCBI chr10:47,795,709...47,825,715
Ensembl chr10:47,795,709...47,825,714 		JBrowse link
G Ppp2cb protein phosphatase 2 catalytic subunit beta acts_upstream_of_or_within ISO (MGI:3694309|PMID:16717086) RGD PMID:16717086 MGI:3694309 NCBI chr16:58,558,119...58,579,325
Ensembl chr16:58,558,122...58,579,576 		JBrowse link
G Ppp2r5c protein phosphatase 2, regulatory subunit B', gamma acts_upstream_of_or_within ISO (PMID:16717086) RGD PMID:16717086 NCBI chr 6:129,461,689...129,598,344
Ensembl chr 6:129,461,648...129,598,346 		JBrowse link
G Prame PRAME nuclear receptor transcriptional regulator involved_in ISO (PMID:26138980) RGD PMID:26138980 NCBI chr  X:98,567,994...98,574,654
Ensembl chr  X:98,569,415...98,572,096 		JBrowse link
G Pramef27 PRAME family member 27 involved_in ISO (PMID:26138980) RGD PMID:26138980 NCBI chr 5:155,752,765...155,759,663
Ensembl chr 5:155,756,015...155,759,663 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO
ISS		 (PMID:11439185), (PMID:21376232)
GO_REF:0000024		 RGD
ParkinsonsUK-UCL		 PMID:11439185 PMID:21376232 GO_REF:0000024 NCBI chr 1:48,688,651...49,882,520
Ensembl chr 1:48,690,556...49,882,555 		JBrowse link
G Psma5 proteasome 20S subunit alpha 5 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:195,896,369...195,919,733
Ensembl chr 2:195,896,365...195,919,731 		JBrowse link
G Psmb3 proteasome 20S subunit beta 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:82,697,425...82,704,521
Ensembl chr10:82,697,425...82,704,521 		JBrowse link
G Psmb5 proteasome 20S subunit beta 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(MGI:3047032|PMID:15198663)		 Ensembl
RGD		 PMID:15198663 GO_REF:0000107 MGI:3047032 NCBI chr15:28,072,772...28,077,367
Ensembl chr15:28,072,781...28,077,440 		JBrowse link
G Psmc1 proteasome 26S subunit, ATPase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:119,392,833...119,405,233
Ensembl chr 6:119,392,855...119,410,123 		JBrowse link
G Psmc2 proteasome 26S subunit, ATPase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:13,255,851...13,270,102
Ensembl chr 4:13,255,856...13,270,185 		JBrowse link
G Psmc3 proteasome 26S subunit, ATPase 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:77,031,825...77,037,207
Ensembl chr 3:77,031,825...77,043,358 		JBrowse link
G Psmc4 proteasome 26S subunit, ATPase 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:83,349,127...83,357,497
Ensembl chr 1:83,348,592...83,357,494 		JBrowse link
G Psmc5 proteasome 26S subunit, ATPase 5 involved_in ISO
IBA
ISS		 (PMID:12110588)
PMID:21873635
GO_REF:0000024		 RGD
UniProt		 PMID:12110588 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:91,187,763...91,193,697
Ensembl chr10:91,187,743...91,213,135 		JBrowse link
G Psmd1 proteasome 26S subunit, non-ATPase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:86,709,714...86,785,213
Ensembl chr 9:86,709,947...86,785,211 		JBrowse link
G Psmd12 proteasome 26S subunit, non-ATPase 12 ISO RGD PMID:9426256 RGD:8693626 NCBI chr10:92,438,223...92,457,323
Ensembl chr10:92,438,298...92,457,287 		JBrowse link
G Psmd14 proteasome 26S subunit, non-ATPase 14 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:46,254,338...46,347,076
Ensembl chr 3:46,254,330...46,347,076 		JBrowse link
G Psmd2 proteasome 26S subunit ubiquitin receptor, non-ATPase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:80,248,364...80,258,991
Ensembl chr11:80,248,364...80,259,043 		JBrowse link
G Psmd4 proteasome 26S subunit ubiquitin receptor, non-ATPase 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:182,598,934...182,608,250
Ensembl chr 2:182,598,934...182,608,194 		JBrowse link
G Psmd6 proteasome 26S subunit, non-ATPase 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:11,102,208...11,112,180
Ensembl chr15:11,102,180...11,205,620 		JBrowse link
G Psmd7 proteasome 26S subunit, non-ATPase 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:35,494,317...35,501,605
Ensembl chr19:35,494,316...35,501,588 		JBrowse link
G Psmd8 proteasome 26S subunit, non-ATPase 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:84,474,377...84,481,209
Ensembl chr 1:84,474,378...84,481,209 		JBrowse link
G Psmf1 proteasome inhibitor subunit 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:140,235,371...140,260,546
Ensembl chr 3:140,235,373...140,260,546 		JBrowse link
G Rad23a RAD23 homolog A, nucleotide excision repair protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:23,313,563...23,320,702
Ensembl chr19:23,314,797...23,320,695 		JBrowse link
G Rad23b RAD23 homolog B, nucleotide excision repair protein involved_in IBA
IEA		 PMID:21873635
GO_REF:0000104		 UniProt PMID:21873635 GO_REF:0000104, RGD:13792537 NCBI chr 5:70,090,232...70,128,340
Ensembl chr 5:70,090,232...70,128,319 		JBrowse link
G Rbck1 RANBP2-type and C3HC4-type zinc finger containing 1 involved_in IEA
IBA
ISO		 GO_REF:0000107
PMID:21873635
(PMID:17449468)		 Ensembl
RGD		 PMID:17449468 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 3:140,789,079...140,806,017
Ensembl chr 3:140,789,080...140,806,005 		JBrowse link
G Rbx1 ring-box 1 involved_in ISO (PMID:20389280), (PMID:34480022) RGD PMID:20389280 PMID:34480022 NCBI chr 7:112,976,863...113,001,051
Ensembl chr 7:112,990,835...113,001,051 		JBrowse link
G Rffl ring finger and FYVE-like domain containing E3 ubiquitin protein ligase involved_in ISS
IBA
ISO		 GO_REF:0000024
PMID:21873635
(PMID:18382127), (PMID:22609986)		 UniProt
RGD		 PMID:18382127 PMID:22609986 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:67,740,711...67,803,694
Ensembl chr10:67,740,712...67,824,434 		JBrowse link
G RGD1563667 similar to TDPOZ3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:181,879,563...181,953,471
Ensembl chr 2:181,879,555...182,004,263 		JBrowse link
G RGD1564313 similar to TDPOZ3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:179,520,448...179,521,542
Ensembl chr 2:179,520,409...179,521,542 		JBrowse link
G RGD1564425 similar to Proteasome subunit beta type 3 (Proteasome theta chain) involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:118,672,316...118,672,933
Ensembl chr 3:118,672,233...118,672,933 		JBrowse link
G RGD1566337 similar to TDPOZ2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:179,417,655...179,418,749
Ensembl chr 2:179,417,655...179,418,749 		JBrowse link
G Rhobtb3 Rho-related BTB domain containing 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:5,363,388...5,419,164
Ensembl chr 2:5,363,388...5,419,041 		JBrowse link
G Rmnd5a required for meiotic nuclear division 5 homolog A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:103,375,846...103,432,890
Ensembl chr 4:103,379,908...103,433,051 		JBrowse link
G Rmnd5b required for meiotic nuclear division 5 homolog B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:35,881,250...35,892,322
Ensembl chr10:35,881,268...35,892,265 		JBrowse link
G Rnf122 ring finger protein 122 involved_in ISO (PMID:20553626) RGD PMID:20553626 NCBI chr16:61,009,879...61,027,520
Ensembl chr16:61,009,879...61,027,448 		JBrowse link
G Rnf126 ring finger protein 126 involved_in ISO (PMID:24981174) RGD PMID:24981174 NCBI chr 7:9,939,359...9,946,963
Ensembl chr 7:9,938,229...9,946,738 		JBrowse link
G Rnf186 ring finger protein 186 involved_in ISO
IBA		 (PMID:23896122)
PMID:21873635		 RGD PMID:23896122 PMID:21873635 RGD:13792537 NCBI chr 5:151,210,492...151,211,716
Ensembl chr 5:151,210,492...151,211,716 		JBrowse link
G Rnf187 ring finger protein 187 involved_in ISO
ISS		 (PMID:20852630)
GO_REF:0000024		 RGD
UniProt		 PMID:20852630 GO_REF:0000024 NCBI chr10:43,709,493...43,715,392
Ensembl chr10:43,702,357...43,716,157 		JBrowse link
G Rnf216 ring finger protein 216 involved_in ISO (PMID:19893624) RGD PMID:19893624 NCBI chr12:11,454,752...11,576,305
Ensembl chr12:11,454,797...11,576,304 		JBrowse link
G Rnf34 ring finger protein 34 involved_in ISO
IBA
ISS		 (PMID:15069192), (PMID:22064484), (PMID:25012219)
PMID:21873635
(MGI:5582154|PMID:22064484)
GO_REF:0000024		 RGD
UniProt		 PMID:15069192 PMID:22064484 PMID:25012219 PMID:21873635 GO_REF:0000024 MGI:5582154, RGD:13792537 NCBI chr12:33,703,655...33,724,606
Ensembl chr12:33,703,673...33,724,586 		JBrowse link
G Rnf4 ring finger protein 4 involved_in ISO
IEA
ISS		 (PMID:18408734), (PMID:20212317), (PMID:20943951)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:18408734 PMID:20212317 PMID:20943951 GO_REF:0000024 GO_REF:0000107 NCBI chr14:76,401,292...76,423,270
Ensembl chr14:76,401,299...76,422,566 		JBrowse link
G Senp1 SUMO specific peptidase 1 acts_upstream_of ISO MGI:3818522 (MGI:3818351|PMID:17981124) RGD PMID:17981124 MGI:3818351 NCBI chr 7:129,163,173...129,226,766
Ensembl chr 7:129,165,774...129,221,598 		JBrowse link
G Sh3bgrl1 SH3 domain binding glutamate rich protein like 1 involved_in ISO (PMID:34331014) RGD PMID:34331014 NCBI chr  X:74,167,029...74,263,783
Ensembl chr  X:74,166,871...74,263,783 		JBrowse link
G Sharpin SHANK-associated RH domain interactor involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:108,070,681...108,075,012
Ensembl chr 7:108,070,687...108,074,955 		JBrowse link
G Siah1 siah E3 ubiquitin protein ligase 1 involved_in ISS
ISO
IBA		 GO_REF:0000024
(PMID:28546513), (PMID:33591310)
PMID:21873635
(MGI:4441266|PMID:16615911), (MGI:6867117|PMID:28546513)		 UniProt
RGD		 PMID:16615911 PMID:28546513 PMID:33591310 PMID:21873635 GO_REF:0000024 MGI:4441266 MGI:6867117, RGD:13792537 NCBI chr19:20,378,908...20,402,512
Ensembl chr19:20,378,439...20,403,808 		JBrowse link
G Siah2 siah E3 ubiquitin protein ligase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:142,913,924...142,931,752
Ensembl chr 2:142,914,003...142,931,950 		JBrowse link
G Siah3 siah E3 ubiquitin protein ligase family member 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:50,770,963...50,834,278
Ensembl chr15:50,770,871...50,834,487 		JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:21841822) RGD PMID:21841822 NCBI chr20:25,307,143...25,329,260
Ensembl chr20:25,306,917...25,329,260 		JBrowse link
G Sirt2 sirtuin 2 involved_in ISO
ISS		 (PMID:21841822)
GO_REF:0000024		 RGD
UniProt		 PMID:21841822 GO_REF:0000024 NCBI chr 1:84,053,883...84,076,975
Ensembl chr 1:84,052,903...84,076,975 		JBrowse link
G Skp1 S-phase kinase-associated protein 1 involved_in ISO (PMID:15145941), (PMID:34480022) RGD PMID:15145941 PMID:34480022 NCBI chr10:36,401,987...36,417,066
Ensembl chr10:36,402,153...36,417,388 		JBrowse link
G Skp2 S-phase kinase associated protein 2 involved_in ISO (PMID:27194766) RGD PMID:27194766 NCBI chr 2:58,161,226...58,189,293
Ensembl chr 2:58,161,229...58,189,338 		JBrowse link
G Smurf1 SMAD specific E3 ubiquitin protein ligase 1 involved_in ISO
IBA		 (PMID:11278251)
PMID:21873635		 RGD PMID:11278251 PMID:21873635 RGD:13792537 NCBI chr12:9,635,009...9,726,520
Ensembl chr12:9,635,025...9,726,519 		JBrowse link
G Smurf2 SMAD specific E3 ubiquitin protein ligase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:91,761,798...91,862,485
Ensembl chr10:91,761,807...91,862,488 		JBrowse link
G Spop speckle type BTB/POZ protein involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:1347360 (MGI:4836774|PMID:20811152)
(PMID:22085717), (PMID:32109420)		 RGD PMID:20811152 PMID:22085717 PMID:32109420 PMID:21873635 MGI:4836774, RGD:13792537 NCBI chr10:80,358,121...80,438,983
Ensembl chr10:80,358,124...80,483,955 		JBrowse link
G Spopfm2l1 speckle-type BTB/POZ protein family member 2 like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:181,837,103...181,844,470
Ensembl chr 2:181,837,105...181,953,508 		JBrowse link
G Spopl speckle type BTB/POZ protein like involved_in IBA
ISO		 PMID:21873635
(PMID:22632832)		 RGD PMID:22632832 PMID:21873635 RGD:13792537 NCBI chr 3:6,074,681...6,148,508
Ensembl chr 3:6,078,310...6,108,794 		JBrowse link
G Spsb1 splA/ryanodine receptor domain and SOCS box containing 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:160,358,292...160,418,541
Ensembl chr 5:160,358,308...160,418,468 		JBrowse link
G Spsb2 splA/ryanodine receptor domain and SOCS box containing 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:157,612,921...157,615,293
Ensembl chr 4:157,613,401...157,615,284 		JBrowse link
G Spsb3 splA/ryanodine receptor domain and SOCS box containing 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:13,907,175...13,912,841
Ensembl chr10:13,907,253...13,912,841 		JBrowse link
G Spsb4 splA/ryanodine receptor domain and SOCS box containing 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:97,536,519...97,609,757
Ensembl chr 8:97,536,520...97,609,787 		JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 involved_in ISO
IBA		 (PMID:15781469), (PMID:24613385), (PMID:29883609)
(MGI:5318000|PMID:21855799)
PMID:21873635		 RGD PMID:15781469 PMID:21855799 PMID:24613385 PMID:29883609 PMID:21873635 MGI:5318000, RGD:13792537 NCBI chr10:14,850,765...14,853,046
Ensembl chr10:14,850,765...14,853,046 		JBrowse link
G Tbl1x transducin (beta)-like 1 X-linked acts_upstream_of_or_within ISO (MGI:3032799|PMID:14980219) RGD PMID:14980219 MGI:3032799 NCBI chr  X:41,574,558...41,731,117
Ensembl chr  X:41,576,047...41,731,101 		JBrowse link
G Tbl1xr1 TBL1X/Y related 1 acts_upstream_of_or_within ISO (MGI:3032799|PMID:14980219) RGD PMID:14980219 MGI:3032799 NCBI chr 2:104,788,950...104,929,055
Ensembl chr 2:104,801,721...104,929,055 		JBrowse link
G Tbx21 T-box transcription factor 21 involved_in ISO (MGI:5543347|PMID:23616576) RGD PMID:23616576 MGI:5543347 NCBI chr10:82,082,322...82,098,831
Ensembl chr10:82,082,322...82,098,831 		JBrowse link
G Tdpoz1-ps5 TD and POZ domain containing 1, pseudogene 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:181,807,922...181,810,233
Ensembl chr 2:181,808,333...181,809,463 		JBrowse link
G Tnfaip1 TNF alpha induced protein 1 involved_in ISO
ISS
IBA		 (PMID:19782033)
GO_REF:0000024
PMID:21873635		 RGD
UniProt		 PMID:19782033 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:63,417,774...63,432,466
Ensembl chr10:63,417,775...63,432,466 		JBrowse link
G Topors TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase involved_in ISO (PMID:18077445) RGD PMID:18077445 NCBI chr 5:55,388,033...55,399,937
Ensembl chr 5:55,387,632...55,399,937 		JBrowse link
G Trim13 tripartite motif-containing 13 involved_in ISO (PMID:17314412), (PMID:21333377) RGD PMID:17314412 PMID:21333377 NCBI chr15:35,733,548...35,772,676
Ensembl chr15:35,734,107...35,772,677 		JBrowse link
G Trim2 tripartite motif-containing 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:169,500,628...169,652,855
Ensembl chr 2:169,500,634...169,652,927 		JBrowse link
G Trim3 tripartite motif-containing 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:159,950,921...159,973,600
Ensembl chr 1:159,944,908...159,973,600 		JBrowse link
G Trim38 tripartite motif containing 38 acts_upstream_of_or_within ISO (MGI:5441682|PMID:22539786) RGD PMID:22539786 MGI:5441682 NCBI chr17:41,351,857...41,365,021 JBrowse link
G Trim63 tripartite motif containing 63 acts_upstream_of_or_within ISO (MGI:3525851|PMID:15601779) RGD PMID:15601779 MGI:3525851 NCBI chr 5:146,533,492...146,547,332
Ensembl chr 5:146,533,507...146,547,322 		JBrowse link
G Trim71 tripartite motif containing 71 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:114,193,439...114,250,807
Ensembl chr 8:114,199,187...114,250,807 		JBrowse link
G Trim72 tripartite motif containing 72 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (MGI:5602876|PMID:23965929)
PMID:21873635		 RGD PMID:23965929 PMID:21873635 MGI:5602876, RGD:13792537 NCBI chr 1:182,613,753...182,621,613
Ensembl chr 1:182,613,712...182,621,606 		JBrowse link
G Trim9 tripartite motif-containing 9 involved_in ISS
ISO		 GO_REF:0000024
(PMID:20085810)		 UniProt
RGD		 PMID:20085810 GO_REF:0000024 NCBI chr 6:88,756,824...88,856,588
Ensembl chr 6:88,757,303...88,856,542 		JBrowse link
G Trip12 thyroid hormone receptor interactor 12 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:85,916,691...86,043,312
Ensembl chr 9:85,916,691...86,051,403 		JBrowse link
G Ube2a ubiquitin-conjugating enzyme E2A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:116,114,339...116,125,076
Ensembl chr  X:116,113,875...116,125,070 		JBrowse link
G Ube2b ubiquitin-conjugating enzyme E2B involved_in ISO
IBA		 (PMID:10373550)
PMID:21873635		 RGD PMID:10373550 PMID:21873635 RGD:13792537 NCBI chr10:36,248,434...36,263,379
Ensembl chr10:36,248,438...36,264,665 		JBrowse link
G Ube2d3 ubiquitin-conjugating enzyme E2D 3 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
(MGI:3525851|PMID:15601779)
(PMID:20347421)		 UniProt
RGD		 PMID:15601779 PMID:20347421 GO_REF:0000024 MGI:3525851 NCBI chr 2:223,868,397...223,899,606
Ensembl chr 2:223,868,730...223,898,081 		JBrowse link
G Ube2g1 ubiquitin-conjugating enzyme E2G 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:57,225,963...57,306,748
Ensembl chr10:57,225,952...57,308,568 		JBrowse link
G Ube2h ubiquitin-conjugating enzyme E2H acts_upstream_of_or_within ISO MGI:3612190 (MGI:5602876|PMID:23965929) RGD PMID:23965929 MGI:5602876 NCBI chr 4:58,834,674...58,930,156
Ensembl chr 4:58,834,674...58,930,156 		JBrowse link
G Ube2i ubiquitin-conjugating enzyme E2I IMP RGD PMID:9013644 RGD:730030 NCBI chr10:14,277,749...14,294,681
Ensembl chr10:69,701,618...69,702,443
Ensembl chr10:69,701,618...69,702,443 		JBrowse link
G Ube2k ubiquitin-conjugating enzyme E2K involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:42,658,016...42,718,899
Ensembl chr14:42,658,016...42,718,630 		JBrowse link
G Ube2w ubiquitin-conjugating enzyme E2W involved_in ISS
ISO		 GO_REF:0000024
(MGI:5318000|PMID:21855799)		 UniProt
RGD		 PMID:21855799 GO_REF:0000024 MGI:5318000 NCBI chr 5:2,690,742...2,754,491
Ensembl chr 5:2,690,763...2,814,965 		JBrowse link
G Ube3d ubiquitin protein ligase E3D involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:87,245,503...87,413,104
Ensembl chr 8:87,245,589...87,413,057 		JBrowse link
G Ube4b ubiquitination factor E4B acts_upstream_of_or_within ISO (PMID:23509263) RGD PMID:23509263 NCBI chr 5:159,766,829...159,870,509
Ensembl chr 5:159,766,829...159,870,509 		JBrowse link
G Ubxn11 UBX domain protein 11 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:146,329,666...146,353,529
Ensembl chr 5:146,329,842...146,353,526 		JBrowse link
G Ubxn2a UBX domain protein 2A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:27,884,253...27,912,709
Ensembl chr 6:27,884,680...27,912,649 		JBrowse link
G Ubxn2b UBX domain protein 2B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:19,303,634...19,333,181
Ensembl chr 5:19,303,682...19,326,849 		JBrowse link
G Usp14 ubiquitin specific peptidase 14 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr18:1,018,111...1,057,727
Ensembl chr18:1,019,400...1,057,519 		JBrowse link
G Usp44 ubiquitin specific peptidase 44 involved_in ISO (MGI:5448515|PMID:21853124) RGD PMID:21853124 MGI:5448515 NCBI chr 7:28,364,169...28,412,039
Ensembl chr 7:28,364,033...28,410,053 		JBrowse link
G Vcp valosin-containing protein involved_in ISS
ISO		 GO_REF:0000024
(MGI:5780912|PMID:26692333)
(PMID:20104022)		 UniProt
RGD		 PMID:20104022 PMID:26692333 GO_REF:0000024 MGI:5780912 NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571 		JBrowse link
G Wdr26 WD repeat domain 26 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:92,930,282...92,972,061
Ensembl chr13:92,930,285...92,977,295 		JBrowse link
G Wwp1 WW domain containing E3 ubiquitin protein ligase 1 involved_in ISO
IBA		 (MGI:4820705|PMID:19561640), (MGI:4820708|PMID:19047365)
PMID:21873635		 RGD PMID:19047365 PMID:19561640 PMID:21873635 MGI:4820705 MGI:4820708, RGD:13792537 NCBI chr 5:33,092,379...33,185,887
Ensembl chr 5:33,098,494...33,186,046 		JBrowse link
G Wwp2 WW domain containing E3 ubiquitin protein ligase 2 involved_in ISO
IBA		 (PMID:19274063)
PMID:21873635
(MGI:4821930|PMID:19997087)		 RGD PMID:19274063 PMID:19997087 PMID:21873635 MGI:4821930, RGD:13792537 NCBI chr19:35,346,826...35,471,251
Ensembl chr19:35,346,814...35,472,699 		JBrowse link
G Zfand2a zinc finger AN1-type containing 2A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:15,161,601...15,172,679
Ensembl chr12:15,161,639...15,172,677 		JBrowse link
G Zfand2b zinc finger AN1-type containing 2B involved_in ISO
IBA		 (MGI:5780912|PMID:26692333)
PMID:21873635
(PMID:26692333)		 RGD PMID:26692333 PMID:21873635 MGI:5780912, RGD:13792537 NCBI chr 9:76,665,466...76,668,447
Ensembl chr 9:76,665,546...76,668,445 		JBrowse link
G Znrf1 zinc and ring finger 1 involved_in ISO
IBA		 (MGI:5306704|PMID:22057101)
PMID:21873635		 RGD PMID:22057101 PMID:21873635 MGI:5306704, RGD:13792537 NCBI chr19:39,496,886...39,581,600
Ensembl chr19:39,496,527...39,580,969 		JBrowse link
G Znrf2 zinc and ring finger 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:83,950,406...84,032,676
Ensembl chr 4:83,949,309...84,027,818 		JBrowse link
G Zswim8 zinc finger, SWIM-type containing 8 involved_in ISO (PMID:33184234) RGD PMID:33184234 NCBI chr15:3,573,780...3,589,501
Ensembl chr15:3,573,780...3,589,487 		JBrowse link
protein arginylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ate1 arginyltransferase 1 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (MGI:3587444|PMID:16002466)
PMID:21873635		 RGD PMID:16002466 PMID:21873635 MGI:3587444, RGD:13792537 NCBI chr 1:184,961,548...185,081,112
Ensembl chr 1:184,963,562...185,080,908 		JBrowse link
G Liat1 ligand of ATE1 involved_in IBA
ISO		 PMID:21873635
(MGI:5608602|PMID:25369936)		 RGD PMID:25369936 PMID:21873635 MGI:5608602, RGD:13792537 NCBI chr10:60,872,529...60,876,191
Ensembl chr10:60,872,511...60,876,204 		JBrowse link
protein deubiquitination involved in ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Otud7a OTU deubiquitinase 7A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:117,064,428...117,388,217
Ensembl chr 1:117,064,496...117,386,480 		JBrowse link
G Otud7b OTU deubiquitinase 7B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:183,661,955...183,722,584
Ensembl chr 2:183,662,163...183,718,674 		JBrowse link
G Tnfaip3 TNF alpha induced protein 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:13,709,211...13,724,291
Ensembl chr 1:13,709,206...13,725,282 		JBrowse link
G Usp28 ubiquitin specific peptidase 28 involved_in ISO (PMID:24623306) RGD PMID:24623306 NCBI chr 8:49,325,766...49,386,229
Ensembl chr 8:49,325,867...49,386,229 		JBrowse link
G Usp9x ubiquitin specific peptidase 9, X-linked involved_in ISO (PMID:29626158)
(MGI:6157201|PMID:29626158)		 RGD PMID:29626158 MGI:6157201 NCBI chr  X:9,588,825...9,726,993
Ensembl chr  X:9,588,825...9,696,711 		JBrowse link
G Zranb1 zinc finger RANBP2-type containing 1 involved_in ISO
IBA		 (PMID:18281465)
PMID:21873635		 RGD PMID:18281465 PMID:21873635 RGD:13792537 NCBI chr 1:187,725,354...187,780,129
Ensembl chr 1:187,724,320...187,779,655 		JBrowse link
protein localization to cytosolic proteasome complex involved in ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atxn3 ataxin 3 involved_in ISO (PMID:17000876) RGD PMID:17000876 NCBI chr 6:121,072,228...121,107,902
Ensembl chr 6:121,074,448...121,107,902 		JBrowse link
protein quality control for misfolded or incompletely synthesized proteins term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankzf1 ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1 involved_in ISO
ISS		 (PMID:29632312), (PMID:30244831), (PMID:31011209), (PMID:32075755)
GO_REF:0000024		 RGD
UniProt		 PMID:29632312 PMID:30244831 PMID:31011209 PMID:32075755 GO_REF:0000024 NCBI chr 9:76,688,223...76,695,141
Ensembl chr 9:76,688,194...76,696,469 		JBrowse link
G Atxn3 ataxin 3 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5318000|PMID:21855799)		 UniProt
RGD		 PMID:21855799 GO_REF:0000024 MGI:5318000 NCBI chr 6:121,072,228...121,107,902
Ensembl chr 6:121,074,448...121,107,902 		JBrowse link
G Clpp caseinolytic mitochondrial matrix peptidase proteolytic subunit involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:1,831,680...1,837,700
Ensembl chr 9:1,830,311...1,837,693 		JBrowse link
G Fbxl17 F-box and leucine-rich repeat protein 17 involved_in ISO (PMID:30190310) RGD PMID:30190310 NCBI chr 9:102,780,573...103,206,755
Ensembl chr 9:102,782,440...103,208,950 		JBrowse link
G Hdac6 histone deacetylase 6 involved_in ISO (PMID:14675537) RGD PMID:14675537 NCBI chr  X:14,550,645...14,572,445
Ensembl chr  X:14,551,044...14,572,441 		JBrowse link
G Lonp1 lon peptidase 1, mitochondrial involved_in IEA
IBA		 GO_REF:0000104
PMID:21873635		 UniProt PMID:21873635 GO_REF:0000104, RGD:13792537 NCBI chr 9:1,447,444...1,459,771
Ensembl chr 9:1,447,447...1,459,771 		JBrowse link
G Lonp2 lon peptidase 2, peroxisomal involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr19:20,407,475...20,499,030
Ensembl chr19:20,407,477...20,499,014 		JBrowse link
G Ngly1 N-glycanase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:9,153,738...9,210,228
Ensembl chr15:9,153,738...9,204,630 		JBrowse link
G Oma1 OMA1 zinc metallopeptidase involved_in ISO
IBA
ISS		 (PMID:20038677)
PMID:21873635
GO_REF:0000024		 RGD
UniProt		 PMID:20038677 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 5:118,083,728...118,136,980
Ensembl chr 5:118,083,728...118,136,980 		JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 involved_in IBA
ISO		 PMID:21873635
(MGI:5318000|PMID:21855799)
(PMID:16831871)		 RGD PMID:16831871 PMID:21855799 PMID:21873635 MGI:5318000, RGD:13792537 NCBI chr10:14,850,765...14,853,046
Ensembl chr10:14,850,765...14,853,046 		JBrowse link
G Ube2w ubiquitin-conjugating enzyme E2W involved_in ISS
ISO		 GO_REF:0000024
(MGI:5318000|PMID:21855799)		 UniProt
RGD		 PMID:21855799 GO_REF:0000024 MGI:5318000 NCBI chr 5:2,690,742...2,754,491
Ensembl chr 5:2,690,763...2,814,965 		JBrowse link
G Yme1l1 YME1-like 1 ATPase involved_in ISS
ISO
IBA		 GO_REF:0000024
(PMID:22262461)
PMID:21873635		 UniProt
RGD		 PMID:22262461 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr17:85,287,607...85,326,068
Ensembl chr17:85,287,554...85,326,335 		JBrowse link
G Zer1 zyg-11 related, cell cycle regulator involved_in ISO (PMID:31273098) RGD PMID:31273098 NCBI chr 3:13,369,688...13,397,524
Ensembl chr 3:13,369,688...13,397,420 		JBrowse link
G Zyg11b zyg-11 family member B, cell cycle regulator involved_in ISO (PMID:31273098) RGD PMID:31273098 NCBI chr 5:122,985,548...123,042,735
Ensembl chr 5:122,992,147...123,042,736 		JBrowse link
protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptpn23 protein tyrosine phosphatase, non-receptor type 23 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:110,360,804...110,383,271
Ensembl chr 8:110,360,804...110,383,271 		JBrowse link
G Snf8 SNF8 subunit of ESCRT-II involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:80,984,337...80,996,724
Ensembl chr10:80,984,363...80,996,734 		JBrowse link
G Stam signal transducing adaptor molecule involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:77,120,235...77,166,173
Ensembl chr17:77,120,158...77,166,467 		JBrowse link
G Vps25 vacuolar protein sorting 25 homolog involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:86,196,062...86,201,606
Ensembl chr10:86,188,812...86,231,829 		JBrowse link
G Vps28 VPS28 subunit of ESCRT-I involved_in IBA
IEA		 PMID:21873635
GO_REF:0000104		 UniProt PMID:21873635 GO_REF:0000104, RGD:13792537 NCBI chr 7:108,341,989...108,345,837
Ensembl chr 7:108,341,989...108,345,837 		JBrowse link
G Vps36 vacuolar protein sorting 36 homolog involved_in IEA
IBA		 GO_REF:0000104
PMID:21873635		 UniProt PMID:21873635 GO_REF:0000104, RGD:13792537 NCBI chr16:69,810,404...69,834,789
Ensembl chr16:69,808,193...69,834,810 		JBrowse link
regulation of ER-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Herpud1 homocysteine inducible ER protein with ubiquitin like domain 1 involved_in ISO
IBA		 (MGI:5613477|PMID:15147274)
PMID:21873635		 RGD PMID:15147274 PMID:21873635 MGI:5613477, RGD:13792537 NCBI chr19:10,598,411...10,609,002
Ensembl chr19:10,598,417...10,618,424 		JBrowse link
regulation of ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Usp19 ubiquitin specific peptidase 19 involved_in ISO
IEA		 (PMID:25088257)
GO_REF:0000107		 RGD
Ensembl		 PMID:25088257 GO_REF:0000107 NCBI chr 8:109,190,727...109,201,761
Ensembl chr 8:109,190,724...109,201,741 		JBrowse link
regulation of proteasomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E involved_in IEA
ISO		 GO_REF:0000107
(PMID:28111074)		 Ensembl
RGD		 PMID:28111074 GO_REF:0000107 NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932 		JBrowse link
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase acts_upstream_of_or_within ISO (MGI:3835892|PMID:19103752) RGD PMID:19103752 MGI:3835892 NCBI chr 1:244,210,299...244,380,126
Ensembl chr 1:244,210,314...244,376,721 		JBrowse link
G Dlgap1 DLG associated protein 1 involved_in IMP PMID:15496675 BHF-UCL PMID:15496675 RGD:8553458 NCBI chr 9:109,857,500...110,726,817
Ensembl chr 9:110,167,448...110,726,817 		JBrowse link
G Dnaaf4 dynein axonemal assembly factor 4 involved_in ISS
ISO		 GO_REF:0000024
(PMID:19423554)		 UniProt
RGD		 PMID:19423554 GO_REF:0000024 NCBI chr 8:73,696,394...73,711,315
Ensembl chr 8:73,698,103...73,711,292 		JBrowse link
G Epm2a EPM2A glucan phosphatase, laforin acts_upstream_of_or_within ISO MGI:2182627 (MGI:5793002|PMID:27107699) RGD PMID:27107699