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ONTOLOGY REPORT - ANNOTATIONS

Term:segment specification
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Accession:GO:0007379 term browser browse the term
Definition:The process in which segments assume individual identities; exemplified in insects by the actions of the products of the homeotic genes.


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segment specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dvl2 dishevelled segment polarity protein 2 acts_upstream_of_or_within IMP (PMID:12421720) MGI PMID:12421720 NCBI chr11:69,891,418...69,900,935
Ensembl chr11:69,891,421...69,903,127 		JBrowse link
G Hoxa2 homeobox A2 acts_upstream_of_or_within IMP (PMID:9367425) MGI PMID:9367425 NCBI chr 6:52,139,389...52,141,808
Ensembl chr 6:52,139,397...52,141,811 		JBrowse link
G Mafb MAF bZIP transcription factor B acts_upstream_of_or_within IMP (PMID:12701106) MGI PMID:12701106 NCBI chr 2:160,205,597...160,208,985
Ensembl chr 2:160,205,623...160,208,985 		JBrowse link
G Mllt3 myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3 acts_upstream_of_or_within IMP (PMID:12242306) MGI PMID:12242306 NCBI chr 4:87,688,162...87,951,652
Ensembl chr 4:87,688,162...87,951,601 		JBrowse link
G Msgn1 mesogenin 1 acts_upstream_of_or_within IMP (PMID:11124811) MGI PMID:11124811 NCBI chr12:11,258,383...11,258,949
Ensembl chr12:11,258,361...11,258,973 		JBrowse link
G Mtf2 metal response element binding transcription factor 2 involved_in IMP (MGI:4946172|PMID:21059868) UniProt PMID:21059868 MGI:4946172 NCBI chr 5:108,213,518...108,257,085
Ensembl chr 5:108,213,540...108,256,870 		JBrowse link
somite specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cobl cordon-bleu WH2 repeat involved_in IEP (MGI:76306|PMID:7586755) BHF-UCL PMID:7586755 MGI:76306 NCBI chr11:12,186,676...12,415,022
Ensembl chr11:12,186,608...12,414,960 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 acts_upstream_of_or_within IMP (PMID:14960495) MGI PMID:14960495 NCBI chr17:15,587,616...15,597,275
Ensembl chr17:15,587,616...15,597,134 		JBrowse link
G Meox1 mesenchyme homeobox 1 acts_upstream_of_or_within IGI (PMID:12925591) MGI PMID:12925591 NCBI chr11:101,768,336...101,785,309
Ensembl chr11:101,768,336...101,785,200 		JBrowse link
G Meox2 mesenchyme homeobox 2 acts_upstream_of_or_within IGI (PMID:12925591) MGI PMID:12925591 NCBI chr12:37,158,539...37,229,533
Ensembl chr12:37,158,539...37,229,533 		JBrowse link
specification of anterior mesonephric tubule identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in IMP (MGI:3697513|PMID:16790474) UniProt PMID:16790474 MGI:3697513 NCBI chr12:9,624,442...9,631,500
Ensembl chr12:9,620,116...9,631,500 		JBrowse link
specification of loop of Henle identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes5 hes family bHLH transcription factor 5 involved_in IEP (MGI:3576186|PMID:15821257) UniProt PMID:15821257 MGI:3576186 NCBI chr 4:155,042,358...155,046,829
Ensembl chr 4:155,045,380...155,046,828 		JBrowse link
G Irx1 Iroquois homeobox 1 involved_in IEP (MGI:3758158|PMID:17875669) UniProt PMID:17875669 MGI:3758158 NCBI chr13:72,106,351...72,111,842
Ensembl chr13:72,106,040...72,111,842 		JBrowse link
G Irx2 Iroquois homeobox 2 involved_in IEP (MGI:3758158|PMID:17875669) UniProt PMID:17875669 MGI:3758158 NCBI chr13:72,771,463...72,782,315
Ensembl chr13:72,776,939...72,782,317 		JBrowse link
G Irx3 Iroquois related homeobox 3 involved_in IEP (MGI:3758158|PMID:17875669) UniProt PMID:17875669 MGI:3758158 NCBI chr 8:92,525,139...92,528,282
Ensembl chr 8:92,525,153...92,528,695 		JBrowse link
specification of posterior mesonephric tubule identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in IMP (MGI:3697513|PMID:16790474) UniProt PMID:16790474 MGI:3697513 NCBI chr12:9,624,442...9,631,500
Ensembl chr12:9,620,116...9,631,500 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28576
    multicellular organismal process 8916
      pattern specification process 496
        segment specification 15
          somite specification 4
          specification of nephron tubule identity + 5
          specification of segmental identity, head + 0
          specification of segmental identity, trunk + 0
Path 2
Term Annotations click to browse term
  biological_process 28576
    developmental process 7377
      anatomical structure development 6849
        multicellular organism development 5442
          pattern specification process 496
            regionalization 451
              segmentation 114
                segment specification 15
                  somite specification 4
                  specification of nephron tubule identity + 5
                  specification of segmental identity, head + 0
                  specification of segmental identity, trunk + 0
paths to the root