Osr1 (odd-skipped related transcription factor 1) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Osr1 (odd-skipped related transcription factor 1) Mus musculus
Analyze
Symbol: Osr1
Name: odd-skipped related transcription factor 1
RGD ID: 1620082
MGI Page MGI
Description: Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Involved in several processes, including embryonic limb morphogenesis; kidney development; and regulation of transcription by RNA polymerase II. Acts upstream of or within several processes, including cellular response to retinoic acid; gonad development; and intermediate mesoderm development. Predicted to be located in cytosol. Predicted to be extrinsic component of membrane. Predicted to be active in nucleus. Is expressed in several structures, including branchial arch; central nervous system; embryo mesenchyme; genitourinary system; and limb. Orthologous to human OSR1 (odd-skipped related transcription factor 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: Odd; odd-skipped related 1; odd-skipped related 1 (Drosophila); Odd1; Osr; protein odd-skipped-related 1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39129,624,442 - 9,631,500 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl129,620,116 - 9,631,500 (+)EnsemblGRCm39 Ensembl
GRCm38129,574,442 - 9,581,500 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl129,570,116 - 9,581,500 (+)EnsemblGRCm38mm10GRCm38
MGSCv37129,581,248 - 9,588,306 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36129,600,505 - 9,606,919 (+)NCBIMGSCv36mm8
Celera129,956,176 - 9,963,227 (+)NCBICelera
Cytogenetic Map12A1.1NCBI
cM Map124.05NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
cell differentiation  (IGI)
cell proliferation involved in kidney development  (IMP)
cellular response to retinoic acid  (IEP)
chondrocyte differentiation  (IGI)
embryonic digit morphogenesis  (IGI)
embryonic forelimb morphogenesis  (IGI)
embryonic hindlimb morphogenesis  (IGI)
embryonic skeletal joint development  (IGI)
embryonic skeletal joint morphogenesis  (IGI)
embryonic skeletal limb joint morphogenesis  (IGI)
gonad development  (IMP)
heart development  (IMP)
intermediate mesoderm development  (IMP)
mesangial cell development  (IMP)
mesonephric duct morphogenesis  (IMP)
mesonephros development  (IMP)
metanephric cap mesenchymal cell proliferation involved in metanephros development  (IMP)
metanephric epithelium development  (IMP)
metanephric glomerulus vasculature development  (IMP)
metanephric interstitial fibroblast development  (IMP)
metanephric mesenchymal cell differentiation  (IMP)
metanephric mesenchyme development  (IDA)
metanephric mesenchyme morphogenesis  (IMP)
metanephric nephron tubule development  (IMP)
metanephric smooth muscle tissue development  (IMP)
metanephros development  (IMP)
middle ear morphogenesis  (IGI)
negative regulation of apoptotic process  (IMP)
negative regulation of creatine transmembrane transporter activity  (ISO)
negative regulation of epithelial cell differentiation  (IMP)
negative regulation of nephron tubule epithelial cell differentiation  (IMP)
negative regulation of sodium ion transmembrane transporter activity  (ISO)
negative regulation of transcription by RNA polymerase II  (IGI)
odontogenesis  (IGI)
pattern specification involved in metanephros development  (IMP)
positive regulation of bone mineralization  (IGI)
positive regulation of epithelial cell proliferation  (IGI)
positive regulation of gastrulation  (ISO)
positive regulation of gene expression  (IMP)
positive regulation of transcription by RNA polymerase II  (IDA,IGI)
posterior mesonephric tubule development  (IMP)
pronephros development  (ISO)
regulation of transcription by RNA polymerase II  (IBA)
renal vesicle progenitor cell differentiation  (IMP)
roof of mouth development  (IGI)
sodium ion transmembrane transport  (IMP)
specification of anterior mesonephric tubule identity  (IMP)
specification of posterior mesonephric tubule identity  (IMP)
stem cell differentiation  (IDA)
ureter urothelium development  (IMP)
ureteric bud development  (IMP)
urogenital system development  (IBA,IMP)

Cellular Component

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal blood circulation  (IAGP)
abnormal bone mineralization  (IAGP)
abnormal cardiovascular system morphology  (IAGP)
abnormal epicardium morphology  (IAGP)
abnormal fetal atrioventricular canal morphology  (IAGP)
abnormal forelimb bud morphology  (IAGP)
abnormal interatrial septum morphology  (IAGP)
abnormal interventricular septum morphology  (IAGP)
abnormal joint morphology  (IAGP)
abnormal kidney development  (IAGP)
abnormal lung morphology  (IAGP)
abnormal mesonephric mesenchyme morphology  (IAGP)
abnormal mesonephros morphology  (IAGP)
abnormal metanephric mesenchyme morphology  (IAGP)
abnormal nephrogenic mesenchyme morphogenesis  (IAGP)
abnormal pericardium morphology  (IAGP)
abnormal reproductive system morphology  (IAGP)
abnormal survival  (IAGP)
abnormal vein morphology  (IAGP)
abnormal Wolffian duct morphology  (IAGP)
absent adrenal gland  (IAGP)
absent kidney  (IAGP)
absent metanephric mesenchyme  (IAGP)
absent metanephros  (IAGP)
absent ovary  (IAGP)
absent testes  (IAGP)
absent ureteric bud  (IAGP)
absent vitelline blood vessels  (IAGP)
agonadal  (IAGP)
common atrium  (IAGP)
dilated heart atrium  (IAGP)
edema  (IAGP)
embryonic growth arrest  (IAGP)
embryonic lethality during organogenesis, complete penetrance  (IAGP)
embryonic lethality during organogenesis, incomplete penetrance  (IAGP)
failure of eyelid fusion  (IAGP)
fused synovial joints  (IAGP)
gonadal ridge hypoplasia  (IAGP)
hemorrhage  (IAGP)
hydrops fetalis  (IAGP)
increased kidney apoptosis  (IAGP)
increased metanephric mesenchyme apoptosis  (IAGP)
lethality throughout fetal growth and development, complete penetrance  (IAGP)
neonatal lethality, complete penetrance  (IAGP)
no abnormal phenotype detected  (IAGP)
prenatal lethality, incomplete penetrance  (IAGP)
rudimentary Wolffian ducts  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10473132   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11520675   PMID:12210313   PMID:12226475   PMID:12466851   PMID:12477932   PMID:15175245  
PMID:15196959   PMID:15489334   PMID:15618518   PMID:16141072   PMID:16141073   PMID:16223478   PMID:16554187   PMID:16790474   PMID:17300925   PMID:17376812   PMID:17547533   PMID:17609113  
PMID:18287559   PMID:18485340   PMID:18804520   PMID:18835385   PMID:19389375   PMID:19591821   PMID:19648291   PMID:19715689   PMID:19769959   PMID:19809516   PMID:20059953   PMID:20171952  
PMID:20185795   PMID:20412781   PMID:21262216   PMID:21267068   PMID:21321328   PMID:21462293   PMID:21482754   PMID:21565611   PMID:21613322   PMID:21821672   PMID:21873635   PMID:22174793  
PMID:22669823   PMID:22833126   PMID:22898775   PMID:22972697   PMID:22988430   PMID:23095210   PMID:23386621   PMID:23546880   PMID:23685333   PMID:23873370   PMID:23874227   PMID:24003036  
PMID:24068957   PMID:24167250   PMID:24332837   PMID:24550112   PMID:24598167   PMID:25190705   PMID:25322850   PMID:25362046   PMID:25515571   PMID:25617721   PMID:25641696   PMID:25739037  
PMID:25834070   PMID:25903664   PMID:25986147   PMID:26116176   PMID:26238476   PMID:26604140   PMID:26744331   PMID:27046536   PMID:27068441   PMID:27320915   PMID:27442016   PMID:27853306  
PMID:28467430   PMID:28501478   PMID:28724605   PMID:28852125   PMID:28862252   PMID:29084951   PMID:29109083   PMID:29234951   PMID:29377931   PMID:29712641   PMID:30292786   PMID:30352852  
PMID:30377232   PMID:31120883   PMID:31142573   PMID:31340933   PMID:31666509   PMID:31736353   PMID:32169905   PMID:32580935   PMID:32804075   PMID:32855417   PMID:33005011   PMID:33951437  
PMID:34256037   PMID:34732852   PMID:34815802   PMID:34830270   PMID:35105870   PMID:35902588  


Genomics

Comparative Map Data
Osr1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39129,624,442 - 9,631,500 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl129,620,116 - 9,631,500 (+)EnsemblGRCm39 Ensembl
GRCm38129,574,442 - 9,581,500 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl129,570,116 - 9,581,500 (+)EnsemblGRCm38mm10GRCm38
MGSCv37129,581,248 - 9,588,306 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36129,600,505 - 9,606,919 (+)NCBIMGSCv36mm8
Celera129,956,176 - 9,963,227 (+)NCBICelera
Cytogenetic Map12A1.1NCBI
cM Map124.05NCBI
OSR1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38219,344,874 - 19,358,623 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl219,351,485 - 19,358,623 (-)EnsemblGRCh38hg38GRCh38
GRCh37219,551,246 - 19,558,384 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36219,414,727 - 19,421,853 (-)NCBINCBI36Build 36hg18NCBI36
Celera219,413,711 - 19,420,835 (-)NCBICelera
Cytogenetic Map2p24.1NCBI
HuRef219,308,802 - 19,315,925 (-)NCBIHuRef
CHM1_1219,480,638 - 19,487,763 (-)NCBICHM1_1
T2T-CHM13v2.0219,384,294 - 19,391,428 (-)NCBIT2T-CHM13v2.0
Osr1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2632,369,561 - 32,380,822 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl632,373,816 - 32,380,817 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx632,670,489 - 32,672,848 (+)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0632,986,375 - 32,988,736 (+)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0632,460,987 - 32,463,354 (+)NCBIRnor_WKY
Rnor_6.0635,314,431 - 35,321,458 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl635,314,444 - 35,321,667 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0645,074,989 - 45,086,319 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4633,074,410 - 33,076,769 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1633,062,739 - 33,079,153 (+)NCBI
Celera631,814,629 - 31,816,988 (+)NCBICelera
Cytogenetic Map6q14NCBI
Osr1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554691,953,370 - 1,961,390 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554691,954,470 - 1,961,344 (-)NCBIChiLan1.0ChiLan1.0
OSR1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12A19,451,067 - 19,458,229 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A19,451,067 - 19,458,229 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v02A19,333,101 - 19,340,267 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
OSR1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11714,508,543 - 14,515,657 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1714,509,333 - 14,589,228 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1714,460,884 - 14,467,497 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01714,653,874 - 14,660,498 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1714,653,360 - 14,847,114 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11714,507,592 - 14,514,210 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01714,515,766 - 14,522,381 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01714,546,710 - 14,553,327 (-)NCBIUU_Cfam_GSD_1.0
Osr1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629258,944,539 - 58,951,592 (-)NCBIHiC_Itri_2
SpeTri2.0NW_00493649311,888,024 - 11,895,058 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
OSR1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl3118,757,920 - 118,765,102 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.13118,368,471 - 118,765,107 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.23126,839,630 - 126,845,239 (+)NCBISscrofa10.2Sscrofa10.2susScr3
OSR1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11488,364,115 - 88,371,258 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1488,364,166 - 88,371,263 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604523,861,885 - 23,869,038 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Osr1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247382,136,151 - 2,138,441 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247382,136,228 - 2,559,092 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11039525Tbbr2_mTrypanosoma brucei brucei response 2 (mouse)12122418579Mouse
1301393Dyscalc3_mdystrophic cardiac calcinosis 3 (mouse)Not determined12122418579Mouse
10402496Lmr22_mleishmaniasis resistance 22 (mouse)Not determined12122418579Mouse
1301143Skull17_mskull morphology 17 (mouse)Not determined12122418579Mouse
1357519Vtbt12_mvertebral trabecular bone trait 12 (mouse)Not determined12124662697Mouse
1301655Bmd12_mbone mineral density 12 (mouse)Not determined12124662697Mouse
4141296Femwf9_mfemur work to failure 9 (mouse)Not determined127920733Mouse
4141436Chldq7_mcholesterol and HDL QTL 7 (mouse)Not determined12127920733Mouse
12910983Pifs1_mpeptide-induced fatal syndrome 1 (mouse)12130433078Mouse
1301925Ath6_matherosclerosis 6 (mouse)Not determined12132758756Mouse
1301207Circp1_mcircadian photosensitivity 1 (mouse)Not determined12133430339Mouse
4141660Nbwa1_mNZB and NZW autoimmunity 1 (mouse)Not determined1234013434340302Mouse
26884410Bzwq15_mbi-zygomatic width QTL 15, 16 week (mouse)12365000029749999Mouse
4142234Tmc1m3_mTmc1 modifier 3 (mouse)Not determined12541844077031203Mouse
1301163Eae16_msusceptibility to experimental allergic encephalomyelitis 16 (mouse)Not determined12772315841723301Mouse
13208568Bmiq11_mbody mass index QTL 11 (mouse)12805000040049999Mouse
25394547Skmw75_mskeletal muscle weight 75, gastroc (mouse)12821257610451853Mouse
1301037Cd4ts5_mCD4 T cell subset 5 (mouse)Not determined12835244442352581Mouse
1301723Fcsa7_mfemoral cross-sectional area 7 (mouse)Not determined12949100443491112Mouse
27226753Femd7_mfemur midshaft diameter 7, 10 week (mouse)12955000084146774Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:298
Count of miRNA genes:225
Interacting mature miRNAs:254
Transcripts:ENSMUST00000057021
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_011859 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036157407 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC116480 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF117814 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK004397 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC023922 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ832175 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU756490 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466582 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571782 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571783 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571784 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571785 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571786 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571787 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571788 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571789 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571790 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571791 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571792 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571793 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571794 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571795 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571796 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571797 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000057021   ⟹   ENSMUSP00000055486
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl129,624,441 - 9,631,500 (+)Ensembl
GRCm38.p6 Ensembl129,574,441 - 9,581,500 (+)Ensembl
RefSeq Acc Id: ENSMUST00000217975   ⟹   ENSMUSP00000151780
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl129,620,116 - 9,629,612 (+)Ensembl
GRCm38.p6 Ensembl129,570,116 - 9,579,612 (+)Ensembl
RefSeq Acc Id: NM_011859   ⟹   NP_035989
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39129,624,442 - 9,631,500 (+)NCBI
GRCm38129,574,442 - 9,581,500 (+)ENTREZGENE
MGSCv37129,581,248 - 9,588,306 (+)RGD
Celera129,956,176 - 9,963,227 (+)RGD
cM Map12 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_036157407   ⟹   XP_036013300
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39129,628,555 - 9,631,500 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_035989 (Get FASTA)   NCBI Sequence Viewer  
  XP_036013300 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAD37115 (Get FASTA)   NCBI Sequence Viewer  
  AAH23922 (Get FASTA)   NCBI Sequence Viewer  
  EDK98421 (Get FASTA)   NCBI Sequence Viewer  
  Q9WVG7 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_035989   ⟸   NM_011859
- UniProtKB: Q9WVG7 (UniProtKB/Swiss-Prot),   A0A6P5QUH0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000151780   ⟸   ENSMUST00000217975
RefSeq Acc Id: ENSMUSP00000055486   ⟸   ENSMUST00000057021
RefSeq Acc Id: XP_036013300   ⟸   XM_036157407
- Peptide Label: isoform X1
- UniProtKB: Q9WVG7 (UniProtKB/Swiss-Prot),   A0A6P5QUH0 (UniProtKB/TrEMBL)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9WVG7-F1-model_v2 AlphaFold Q9WVG7 1-266 view protein structure

Promoters
RGD ID:8677904
Promoter ID:EPDNEW_M16983
Type:multiple initiation site
Name:Osr1_1
Description:Mus musculus odd-skipped related transcription factor 1 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38129,574,469 - 9,574,529EPDNEW
RGD ID:6823242
Promoter ID:MM_KWN:11145
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   Brain,   MEF_B4,   MEF_B6
Transcripts:NM_011859
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36129,581,129 - 9,581,629 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1344424 AgrOrtholog
Ensembl Genes ENSMUSG00000048387 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000055486 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000151780.2 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000057021 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000217975.2 UniProtKB/TrEMBL
InterPro Znf_C2H2_sf UniProtKB/Swiss-Prot
  Znf_C2H2_type UniProtKB/Swiss-Prot
KEGG Report mmu:23967 UniProtKB/Swiss-Prot
MGD MGI:1344424 ENTREZGENE
NCBI Gene 23967 ENTREZGENE
Pfam zf-C2H2 UniProtKB/Swiss-Prot
PhenoGen Osr1 PhenoGen
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/Swiss-Prot
  ZINC_FINGER_C2H2_2 UniProtKB/Swiss-Prot
SMART ZnF_C2H2 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF57667 UniProtKB/Swiss-Prot
UniProt A0A1W2P7S2_MOUSE UniProtKB/TrEMBL
  A0A6P5QUH0 ENTREZGENE
  OSR1_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-10-31 Osr1  odd-skipped related transcription factor 1    odd-skipped related 1 (Drosophila)  Symbol and/or name change 5135510 APPROVED