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ONTOLOGY REPORT - ANNOTATIONS

Term:cell differentiation involved in kidney development
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Accession:GO:0061005 term browser browse the term
Definition:The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells of the kidney as it progresses from its formation to the mature state.


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cell differentiation involved in kidney development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:105373 (PMID:19809516) RGD PMID:19809516 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Glis2 GLIS family zinc finger 2 acts_upstream_of_or_within ISO MGI:3719836 (PMID:17618285) RGD PMID:17618285 NCBI chr10:10,951,157...10,978,524
Ensembl chr10:10,951,371...10,971,578 		JBrowse link
G Ptch1 patched 1 acts_upstream_of_or_within ISO MGI:95729 (PMID:19809516) RGD PMID:19809516 NCBI chr17:1,542,705...1,607,730
Ensembl chr17:1,542,877...1,607,333 		JBrowse link
glomerular mesangial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acta1 actin, alpha 1, skeletal muscle involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr19:51,883,709...51,886,735
Ensembl chr19:51,883,715...51,886,742 		JBrowse link
G Acta2 actin alpha 2, smooth muscle involved_in ISO
IEA		 (PMID:17464107)
GO_REF:0000107		 RGD
Ensembl		 PMID:17464107 GO_REF:0000107 NCBI chr 1:231,746,527...231,759,307
Ensembl chr 1:231,746,548...231,759,554 		JBrowse link
G Actc1 actin, alpha, cardiac muscle 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:100,811,987...100,817,523
Ensembl chr 3:100,811,987...100,817,523 		JBrowse link
G Actg2 actin gamma 2, smooth muscle involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:116,021,832...116,046,475
Ensembl chr 4:116,021,832...116,046,465 		JBrowse link
G Foxc2 forkhead box C2 acts_upstream_of_or_within ISO MGI:1857740 (PMID:16498405) RGD PMID:16498405 NCBI chr19:49,186,034...49,188,736
Ensembl chr19:49,185,662...49,188,737 		JBrowse link
G Gpr4 G protein-coupled receptor 4 acts_upstream_of_or_within ISO MGI:3700206 (PMID:17145776) RGD PMID:17145776 NCBI chr 1:78,865,376...78,877,126
Ensembl chr 1:78,865,409...78,876,599 		JBrowse link
G Notch1 notch receptor 1 involved_in ISO (MGI:3576186|PMID:15821257) RGD PMID:15821257 MGI:3576186 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531 		JBrowse link
glomerular parietal epithelial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxj1 forkhead box J1 involved_in ISO
IEA		 (PMID:9530170)
GO_REF:0000107		 RGD
Ensembl		 PMID:9530170 GO_REF:0000107 NCBI chr10:101,566,299...101,570,370
Ensembl chr10:101,566,304...101,570,237 		JBrowse link
glomerular parietal epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd24 CD24 molecule involved_in ISO
ISS		 (PMID:19092120)
GO_REF:0000024		 RGD
UniProt		 PMID:19092120 GO_REF:0000024 NCBI chr20:47,074,353...47,079,662
Ensembl chr20:47,073,512...47,079,662 		JBrowse link
G Prom1 prominin 1 involved_in ISO (PMID:19092120) RGD PMID:19092120 NCBI chr14:66,989,545...67,094,534
Ensembl chr14:66,990,160...67,094,527 		JBrowse link
kidney smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tshz3 teashirt zinc finger homeobox 3 involved_in ISO (MGI:3806378|PMID:18776146) RGD PMID:18776146 MGI:3806378 NCBI chr 1:89,386,732...89,460,719
Ensembl chr 1:89,381,858...89,460,874 		JBrowse link
mesangial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3826342|PMID:18835385)		 UniProt
RGD		 PMID:18835385 GO_REF:0000024 MGI:3826342 NCBI chr 6:32,369,561...32,380,822
Ensembl chr 6:32,373,816...32,380,817 		JBrowse link
mesenchymal cell differentiation involved in kidney development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amer1 APC membrane recruitment protein 1 acts_upstream_of_or_within ISO MGI:2446599|MGI:5086003 (PMID:21571217) RGD PMID:21571217 NCBI chr  X:60,300,595...60,316,480
Ensembl chr  X:60,295,751...60,316,440 		JBrowse link
G Six2 SIX homeobox 2 involved_in ISO (MGI:3691408|PMID:17036046) RGD PMID:17036046 MGI:3691408 NCBI chr 6:8,974,859...8,981,345
Ensembl chr 6:8,967,157...8,981,193 		JBrowse link
mesenchymal to epithelial transition involved in metanephric renal vesicle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smo smoothened, frizzled class receptor involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:3611729|PMID:16396903)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:16396903 GO_REF:0000024 GO_REF:0000107 MGI:3611729 NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829 		JBrowse link
mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gdnf glial cell derived neurotrophic factor involved_in IEA
ISO
IDA		 GO_REF:0000107
(MGI:1335967|PMID:10322633)
PMID:17522159		 Ensembl
RGD		 PMID:10322633 PMID:17522159 GO_REF:0000107 MGI:1335967, RGD:8656002 NCBI chr 2:56,894,022...56,919,935
Ensembl chr 2:56,895,010...56,917,209 		JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist involved_in ISO (MGI:3714585|PMID:17522159) RGD PMID:17522159 MGI:3714585 NCBI chr 3:100,512,317...100,524,001
Ensembl chr 3:100,512,313...100,524,082 		JBrowse link
G Pax2 paired box 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:1335967|PMID:10322633)		 UniProt
RGD		 PMID:10322633 GO_REF:0000024 MGI:1335967 NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321 		JBrowse link
G Pax8 paired box 8 involved_in ISO (PMID:8861958) RGD PMID:8861958 NCBI chr 3:7,185,721...7,242,363
Ensembl chr 3:7,185,723...7,242,363 		JBrowse link
G Sall1 spalt-like transcription factor 1 involved_in
acts_upstream_of		 ISO (PMID:11511981)
MGI:3603818 (PMID:24550112)
(MGI:2149437|PMID:11688560)		 RGD PMID:11511981 PMID:11688560 PMID:24550112 MGI:2149437 NCBI chr19:18,005,782...18,022,705
Ensembl chr19:18,007,503...18,022,705 		JBrowse link
G Six2 SIX homeobox 2 involved_in ISO (MGI:1335967|PMID:10322633) RGD PMID:10322633 MGI:1335967 NCBI chr 6:8,974,859...8,981,345
Ensembl chr 6:8,967,157...8,981,193 		JBrowse link
metanephric DCT cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pou3f3 POU class 3 homeobox 3 involved_in IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(MGI:2669573|PMID:12925600)		 Ensembl
UniProt
RGD		 PMID:12925600 GO_REF:0000024 GO_REF:0000107 MGI:2669573 NCBI chr 9:44,945,872...44,948,998
Ensembl chr 9:44,945,872...44,948,992 		JBrowse link
metanephric glomerular mesangial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfb platelet derived growth factor subunit B involved_in ISS
ISO		 GO_REF:0000024
(MGI:3039044|PMID:15084468)		 UniProt
RGD		 PMID:15084468 GO_REF:0000024 MGI:3039044 NCBI chr 7:111,539,444...111,557,984
Ensembl chr 7:111,540,345...111,557,984 		JBrowse link
metanephric glomerular mesangial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd34 CD34 molecule involved_in ISO (PMID:1868864) RGD PMID:1868864 NCBI chr13:106,480,313...106,500,844
Ensembl chr13:106,480,043...106,499,832 		JBrowse link
metanephric interstitial fibroblast development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3826342|PMID:18835385)		 UniProt
RGD		 PMID:18835385 GO_REF:0000024 MGI:3826342 NCBI chr 6:32,369,561...32,380,822
Ensembl chr 6:32,373,816...32,380,817 		JBrowse link
metanephric mesenchymal cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3697513|PMID:16790474)		 UniProt
RGD		 PMID:16790474 GO_REF:0000024 MGI:3697513 NCBI chr 6:32,369,561...32,380,822
Ensembl chr 6:32,373,816...32,380,817 		JBrowse link
G Pax2 paired box 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3663200|PMID:16368682)		 UniProt
RGD		 PMID:16368682 GO_REF:0000024 MGI:3663200 NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321 		JBrowse link
G Tcf21 transcription factor 21 involved_in ISS
ISO		 GO_REF:0000024
(MGI:2651771|PMID:12619136)		 UniProt
RGD		 PMID:12619136 GO_REF:0000024 MGI:2651771 NCBI chr 1:22,701,353...22,704,212
Ensembl chr 1:22,701,353...22,704,202 		JBrowse link
metanephric podocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamb2 laminin subunit beta 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2138070 (PMID:16886065)		 Ensembl
RGD		 PMID:16886065 GO_REF:0000107 NCBI chr 8:109,178,367...109,190,552
Ensembl chr 8:109,178,409...109,190,549 		JBrowse link
G Nphs2 NPHS2 stomatin family member, podocin involved_in ISO (PMID:11786407) RGD PMID:11786407 NCBI chr13:68,448,720...68,461,312
Ensembl chr13:68,448,926...68,461,313 		JBrowse link
negative regulation of epithelial cell differentiation involved in kidney development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mmp9 matrix metallopeptidase 9 involved_in IEA
ISO		 GO_REF:0000107
(MGI:6270954|PMID:24503540)		 Ensembl
RGD		 PMID:24503540 GO_REF:0000107 MGI:6270954 NCBI chr 3:153,684,158...153,692,118
Ensembl chr 3:153,683,858...153,692,120 		JBrowse link
negative regulation of kidney smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:2388350|PMID:12399320)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:12399320 GO_REF:0000024 GO_REF:0000107 MGI:2388350 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
negative regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 involved_in IMP PMID:15843474 UniProt PMID:15843474 RGD:8554075 NCBI chr  X:67,350,376...67,355,072
Ensembl chr  X:67,350,373...67,355,162 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:17537789)		 Ensembl
RGD		 PMID:17537789 GO_REF:0000107 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Sall1 spalt-like transcription factor 1 acts_upstream_of_or_within ISO MGI:3603818 (PMID:24550112) RGD PMID:24550112 NCBI chr19:18,005,782...18,022,705
Ensembl chr19:18,007,503...18,022,705 		JBrowse link
negative regulation of nephron tubule epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3697513|PMID:16790474)		 UniProt
RGD		 PMID:16790474 GO_REF:0000024 MGI:3697513 NCBI chr 6:32,369,561...32,380,822
Ensembl chr 6:32,373,816...32,380,817 		JBrowse link
nephron tubule epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mef2c myocyte enhancer factor 2C involved_in ISS
ISO		 GO_REF:0000024
(MGI:4440396|PMID:20181743)		 UniProt
RGD		 PMID:20181743 GO_REF:0000024 MGI:4440396 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880 		JBrowse link
G Mtss1 MTSS I-BAR domain containing 1 involved_in ISO
ISS		 (MGI:4440396|PMID:20181743)
GO_REF:0000024		 RGD
UniProt		 PMID:20181743 GO_REF:0000024 MGI:4440396 NCBI chr 7:90,488,751...90,628,007
Ensembl chr 7:90,488,754...90,627,968 		JBrowse link
podocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ampd2 adenosine monophosphate deaminase 2 acts_upstream_of_or_within ISO MGI:3848348 (PMID:25361754) RGD PMID:25361754 NCBI chr 2:195,707,609...195,720,454
Ensembl chr 2:195,707,610...195,720,271 		JBrowse link
G Asxl1 ASXL transcriptional regulator 1 involved_in ISO (MGI:5751943|PMID:26385183) RGD PMID:26385183 MGI:5751943 NCBI chr 3:141,814,012...141,881,526
Ensembl chr 3:141,813,433...141,881,538 		JBrowse link
G Glcci1 glucocorticoid induced 1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 4:36,307,956...36,635,614
Ensembl chr 4:36,307,903...36,635,612 		JBrowse link
G Jag1 jagged canonical Notch ligand 1 involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:5498584|PMID:23806616)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:23806616 GO_REF:0000024 GO_REF:0000107 MGI:5498584 NCBI chr 3:124,406,783...124,442,220
Ensembl chr 3:124,406,794...124,442,209 		JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in IEP PMID:15994232 UniProt PMID:15994232 RGD:8553727 NCBI chr 4:14,386,389...15,870,036
Ensembl chr 4:14,386,399...15,870,240 		JBrowse link
G Myo1e myosin IE involved_in ISS
ISO		 GO_REF:0000024
(MGI:4441423|PMID:19005011)		 UniProt
RGD		 PMID:19005011 GO_REF:0000024 MGI:4441423 NCBI chr 8:70,887,934...71,080,180
Ensembl chr 8:70,887,870...71,080,169 		JBrowse link
G Notch2 notch receptor 2 involved_in IEA
ISO		 GO_REF:0000107
(MGI:3576186|PMID:15821257)		 Ensembl
RGD		 PMID:15821257 GO_REF:0000107 MGI:3576186 NCBI chr 2:185,610,594...185,744,088
Ensembl chr 2:185,610,589...185,744,088 		JBrowse link
G Nphs1 NPHS1 adhesion molecule, nephrin involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:85,720,812...85,749,079
Ensembl chr 1:85,720,812...85,749,078 		JBrowse link
G Podxl podocalyxin-like involved_in IEP PMID:15994232 UniProt PMID:15994232 RGD:8553727 NCBI chr 4:60,135,124...60,181,829
Ensembl chr 4:60,135,109...60,181,899 		JBrowse link
G Wt1 WT1 transcription factor involved_in ISO (MGI:3806730|PMID:18618131) RGD PMID:18618131 MGI:3806730 NCBI chr 3:91,566,540...91,613,653
Ensembl chr 3:91,567,001...91,613,643 		JBrowse link
podocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Basp1 brain abundant, membrane attached signal protein 1 involved_in ISO
IEA		 (MGI:4418604|PMID:19050011)
GO_REF:0000107		 RGD
Ensembl		 PMID:19050011 GO_REF:0000107 MGI:4418604 NCBI chr 2:75,816,130...75,863,801
Ensembl chr 2:75,816,122...75,864,043 		JBrowse link
G Cd24 CD24 molecule involved_in ISO
ISS		 (PMID:19092120)
GO_REF:0000024		 RGD
UniProt		 PMID:19092120 GO_REF:0000024 NCBI chr20:47,074,353...47,079,662
Ensembl chr20:47,073,512...47,079,662 		JBrowse link
G Cd2ap CD2-associated protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2664945 (PMID:25968128)		 Ensembl
RGD		 PMID:25968128 GO_REF:0000107 NCBI chr 9:18,086,744...18,182,744
Ensembl chr 9:18,086,984...18,182,199 		JBrowse link
G Edn1 endothelin 1 involved_in ISO (PMID:31402170) RGD PMID:31402170 NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885 		JBrowse link
G Ednra endothelin receptor type A involved_in IEA
ISO		 GO_REF:0000107
MGI:102720|MGI:105923 (PMID:24722437), (PMID:31402170)		 Ensembl
RGD		 PMID:24722437 PMID:31402170 GO_REF:0000107 NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049 		JBrowse link
G Ednrb endothelin receptor type B involved_in ISO MGI:102720|MGI:105923 (PMID:24722437) RGD PMID:24722437 NCBI chr15:80,640,839...80,672,115
Ensembl chr15:80,643,043...80,672,115 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within_positive_effect ISO (PMID:18480751) RGD PMID:18480751 NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357 		JBrowse link
G Foxc2 forkhead box C2 acts_upstream_of_or_within ISO MGI:1857740 (PMID:16498405) RGD PMID:16498405 NCBI chr19:49,186,034...49,188,736
Ensembl chr19:49,185,662...49,188,737 		JBrowse link
G Klf15 KLF transcription factor 15 involved_in ISO (MGI:5431194|PMID:22493483) RGD PMID:22493483 MGI:5431194 NCBI chr 4:122,965,718...122,978,403
Ensembl chr 4:122,965,807...122,978,374 		JBrowse link
G Prom1 prominin 1 involved_in ISO (PMID:19092120) RGD PMID:19092120 NCBI chr14:66,989,545...67,094,534
Ensembl chr14:66,990,160...67,094,527 		JBrowse link
G Ptpro protein tyrosine phosphatase, receptor type, O involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(MGI:1927435|PMID:11086029)		 UniProt
GO_Central
RGD		 PMID:11086029 GO_REF:0000024 GO_REF:0000033 MGI:1927435 NCBI chr 4:170,164,071...170,374,790
Ensembl chr 4:170,164,431...170,374,771 		JBrowse link
G Wt1 WT1 transcription factor involved_in ISS
ISO		 GO_REF:0000024
(MGI:4418604|PMID:19050011)		 UniProt
RGD		 PMID:19050011 GO_REF:0000024 MGI:4418604 NCBI chr 3:91,566,540...91,613,653
Ensembl chr 3:91,567,001...91,613,643 		JBrowse link
positive regulation of kidney smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:2388350|PMID:12399320)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:12399320 GO_REF:0000024 GO_REF:0000107 MGI:2388350 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
positive regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gdnf glial cell derived neurotrophic factor involved_in IEA
ISO		 GO_REF:0000107
(MGI:81286|PMID:8657306)		 Ensembl
RGD		 PMID:8657306 GO_REF:0000107 MGI:81286 NCBI chr 2:56,894,022...56,919,935
Ensembl chr 2:56,895,010...56,917,209 		JBrowse link
G Lif LIF, interleukin 6 family cytokine involved_in ISO (PMID:20624457) RGD PMID:20624457 NCBI chr14:79,131,049...79,140,486
Ensembl chr14:79,134,574...79,140,482 		JBrowse link
G Pax2 paired box 2 involved_in ISS
ISO		 GO_REF:0000024
UniProtKB:Q00288 (MGI:2445273|PMID:12435636)		 UniProt
RGD		 PMID:12435636 GO_REF:0000024 MGI:2445273 NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321 		JBrowse link
G Pax8 paired box 8 involved_in ISS
ISO		 GO_REF:0000024
(MGI:2445273|PMID:12435636)		 UniProt
RGD		 PMID:12435636 GO_REF:0000024 MGI:2445273 NCBI chr 3:7,185,721...7,242,363
Ensembl chr 3:7,185,723...7,242,363 		JBrowse link
positive regulation of metanephric DCT cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3704067|PMID:17314325)		 UniProt
RGD		 PMID:17314325 GO_REF:0000024 MGI:3704067 NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321 		JBrowse link
G Pax8 paired box 8 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3704067|PMID:17314325)		 UniProt
RGD		 PMID:17314325 GO_REF:0000024 MGI:3704067 NCBI chr 3:7,185,721...7,242,363
Ensembl chr 3:7,185,723...7,242,363 		JBrowse link
positive regulation of metanephric podocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adipoq adiponectin, C1Q and collagen domain containing involved_in ISS
ISO		 GO_REF:0000024
(MGI:3795840|PMID:18431508)		 UniProt
RGD		 PMID:18431508 GO_REF:0000024 MGI:3795840 NCBI chr11:77,721,912...77,735,644
Ensembl chr11:77,721,912...77,735,564 		JBrowse link
positive regulation of nephron tubule epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd24 CD24 molecule involved_in ISS
ISO		 GO_REF:0000024
(PMID:16885410)		 UniProt
RGD		 PMID:16885410 GO_REF:0000024 NCBI chr20:47,074,353...47,079,662
Ensembl chr20:47,073,512...47,079,662 		JBrowse link
G Lhx1 LIM homeobox 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3613206|PMID:16216236)		 UniProt
RGD		 PMID:16216236 GO_REF:0000024 MGI:3613206 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617 		JBrowse link
G Prom1 prominin 1 involved_in ISO (PMID:16885410) RGD PMID:16885410 NCBI chr14:66,989,545...67,094,534
Ensembl chr14:66,990,160...67,094,527 		JBrowse link
regulation of epithelial cell differentiation involved in kidney development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prkx protein kinase cAMP-dependent X-linked catalytic subunit involved_in ISO (PMID:17980165) RGD PMID:17980165 NCBI chr  X:41,823,349...41,866,844
Ensembl chr  X:41,823,355...41,866,669 		JBrowse link
regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt9b Wnt family member 9B acts_upstream_of_or_within ISO MGI:3526437 (PMID:16054034) RGD PMID:16054034 NCBI chr10:88,635,330...88,657,035
Ensembl chr10:88,635,331...88,657,035 		JBrowse link
regulation of metanephric nephron tubule epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fat4 FAT atypical cadherin 4 acts_upstream_of_or_within ISO (PMID:23974041) RGD PMID:23974041 NCBI chr 2:121,927,266...122,056,700
Ensembl chr 2:121,927,942...122,056,707 		JBrowse link
G Lif LIF, interleukin 6 family cytokine involved_in ISO (PMID:20624457) RGD PMID:20624457 NCBI chr14:79,131,049...79,140,486
Ensembl chr14:79,134,574...79,140,482 		JBrowse link
G Pax2 paired box 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3704067|PMID:17314325)		 UniProt
RGD		 PMID:17314325 GO_REF:0000024 MGI:3704067 NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321 		JBrowse link
G Pax8 paired box 8 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3704067|PMID:17314325)		 UniProt
RGD		 PMID:17314325 GO_REF:0000024 MGI:3704067 NCBI chr 3:7,185,721...7,242,363
Ensembl chr 3:7,185,723...7,242,363 		JBrowse link
G Wwtr1 WW domain containing transcription regulator 1 acts_upstream_of_or_within ISO MGI:103262 (PMID:23974041) RGD PMID:23974041 NCBI chr 2:141,651,159...141,766,919
Ensembl chr 2:141,648,108...141,766,968 		JBrowse link
G Yap1 Yes1 associated transcriptional regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1917649 (PMID:23974041)		 Ensembl
RGD		 PMID:23974041 GO_REF:0000107 NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010 		JBrowse link
regulation of nephron tubule epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 involved_in ISO
IEA		 (MGI:3822373|PMID:19112489)
GO_REF:0000107		 RGD
Ensembl		 PMID:19112489 GO_REF:0000107 MGI:3822373 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Gata3 GATA binding protein 3 involved_in ISO (MGI:3822373|PMID:19112489) RGD PMID:19112489 MGI:3822373 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391 		JBrowse link
renal interstitial fibroblast development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 involved_in IEA
ISO		 GO_REF:0000107
(MGI:3576186|PMID:15821257)		 Ensembl
RGD		 PMID:15821257 GO_REF:0000107 MGI:3576186 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192 		JBrowse link
renal vesicle progenitor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3826342|PMID:18835385)		 UniProt
RGD		 PMID:18835385 GO_REF:0000024 MGI:3826342 NCBI chr 6:32,369,561...32,380,822
Ensembl chr 6:32,373,816...32,380,817 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20413
    developmental process 7068
      cellular developmental process 4768
        cell differentiation 4767
          cell differentiation involved in kidney development 63
            DCT cell differentiation + 3
            cell differentiation involved in mesonephros development + 0
            cell differentiation involved in metanephros development + 22
            cell differentiation involved in pronephros development + 0
            epithelial cell differentiation involved in kidney development + 54
            juxtaglomerulus cell differentiation + 0
            kidney interstitial fibroblast differentiation + 2
            kidney smooth muscle cell differentiation + 2
            mesangial cell differentiation + 10
            mesenchymal cell differentiation involved in kidney development + 5
            mesenchymal stem cell differentiation involved in nephron morphogenesis + 0
            proximal convoluted tubule segment 1 cell differentiation + 0
            renal vesicle progenitor cell differentiation 1
Path 2
Term Annotations click to browse term
  biological_process 20413
    developmental process 7068
      anatomical structure development 6575
        multicellular organism development 5290
          system development 4576
            renal system development 422
              kidney development 409
                cell differentiation involved in kidney development 63
                  DCT cell differentiation + 3
                  cell differentiation involved in mesonephros development + 0
                  cell differentiation involved in metanephros development + 22
                  cell differentiation involved in pronephros development + 0
                  epithelial cell differentiation involved in kidney development + 54
                  juxtaglomerulus cell differentiation + 0
                  kidney interstitial fibroblast differentiation + 2
                  kidney smooth muscle cell differentiation + 2
                  mesangial cell differentiation + 10
                  mesenchymal cell differentiation involved in kidney development + 5
                  mesenchymal stem cell differentiation involved in nephron morphogenesis + 0
                  proximal convoluted tubule segment 1 cell differentiation + 0
                  renal vesicle progenitor cell differentiation 1
paths to the root