ONTOLOGY REPORT - ANNOTATIONS |
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Term: | macrophage differentiation |
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Accession: | GO:0030225
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browse the term
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Definition: | The process in which a relatively unspecialized monocyte acquires the specialized features of a macrophage. |
Synonyms: | exact_synonym: | macrophage cell differentiation |
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Asxl2 |
ASXL transcriptional regulator 2 |
acts_upstream_of |
ISO |
(PMID:21490954) |
RGD |
PMID:21490954 |
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NCBI chr 6:26,425,017...26,514,899
Ensembl chr 6:26,425,954...26,507,477
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Bmp4 |
bone morphogenetic protein 4 |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:21149635) |
Ensembl RGD |
PMID:21149635 |
GO_REF:0000107 |
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
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Casp8 |
caspase 8 |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 MGI:2176089 (PMID:15322156) |
GO_Central RGD |
PMID:15322156 |
GO_REF:0000033 |
NCBI chr 9:60,263,863...60,312,542
Ensembl chr 9:60,264,075...60,312,542
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Cd4 |
Cd4 molecule |
involved_in |
ISO |
(PMID:24942581) |
RGD |
PMID:24942581 |
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NCBI chr 4:157,668,878...157,695,366
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Cebpa |
CCAAT/enhancer binding protein alpha |
acts_upstream_of_or_within |
ISO |
MGI:2177135 (PMID:15073037) |
RGD |
PMID:15073037 |
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NCBI chr 1:87,759,631...87,762,303
Ensembl chr 1:87,759,433...87,762,412
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Cebpe |
CCAAT/enhancer binding protein epsilon |
acts_upstream_of_or_within |
ISO |
MGI:2178607 (PMID:11861297) |
RGD |
PMID:11861297 |
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NCBI chr15:28,169,711...28,171,471
Ensembl chr15:28,169,704...28,171,814
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Csf1 |
colony stimulating factor 1 |
acts_upstream_of |
IEP ISO IDA |
MGI:1856333 (PMID:9215625) |
RGD |
PMID:9215625 PMID:12379742 PMID:20628067 |
RGD:628338, RGD:5131511 |
NCBI chr 2:195,377,215...195,396,608
Ensembl chr 2:195,377,215...195,411,704
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Csf2 |
colony stimulating factor 2 |
involved_in |
ISO |
(PMID:24942581) |
RGD |
PMID:24942581 |
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NCBI chr10:38,386,945...38,388,926
Ensembl chr10:38,386,945...38,389,199
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Diaph3 |
diaphanous-related formin 3 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (PMID:26471482) |
Ensembl RGD |
PMID:26471482 |
GO_REF:0000107 |
NCBI chr15:62,543,375...63,013,060
Ensembl chr15:62,543,375...63,012,975
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Eif2ak1 |
eukaryotic translation initiation factor 2 alpha kinase 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2679454 (PMID:17932563) |
Ensembl RGD |
PMID:17932563 |
GO_REF:0000107 |
NCBI chr12:10,710,771...10,744,597
Ensembl chr12:10,705,874...10,744,573
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Enpp1 |
ectonucleotide pyrophosphatase/phosphodiesterase 1 |
involved_in |
ISO |
MGI:1857079 (PMID:23717624) |
RGD |
PMID:23717624 |
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NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
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Fosl2 |
FOS like 2, AP-1 transcription factor subunit |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:3757560 (PMID:30181393), (PMID:31135379) |
Ensembl RGD |
PMID:30181393 PMID:31135379 |
GO_REF:0000107 |
NCBI chr 6:24,297,898...24,319,219
Ensembl chr 6:24,300,956...24,320,034
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Gata3 |
GATA binding protein 3 |
involved_in |
ISO |
(MGI:6856556|PMID:34644537) |
RGD |
PMID:34644537 |
MGI:6856556 |
NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
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Ifng |
interferon gamma |
involved_in |
ISO |
(PMID:30634164) |
RGD |
PMID:30634164 |
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NCBI chr 7:53,903,339...53,907,375
Ensembl chr 7:53,903,337...53,907,375
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Ighe |
immunoglobulin heavy constant epsilon |
involved_in |
ISO |
(PMID:30956175) |
RGD |
PMID:30956175 |
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Il15 |
interleukin 15 |
involved_in |
ISO IEA |
(PMID:24942581) GO_REF:0000107 |
RGD Ensembl |
PMID:24942581 |
GO_REF:0000107 |
NCBI chr19:25,640,025...25,706,818
Ensembl chr19:25,640,251...25,706,820
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Il1rl1 |
interleukin 1 receptor-like 1 |
involved_in |
IEA ISO ISS |
GO_REF:0000107 (MGI:6856556|PMID:34644537) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:34644537 |
GO_REF:0000024 GO_REF:0000107 MGI:6856556 |
NCBI chr 9:42,661,694...42,727,266
Ensembl chr 9:42,697,192...42,727,256
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Il33 |
interleukin 33 |
involved_in |
IEA ISO ISS |
GO_REF:0000107 (MGI:6856556|PMID:34644537) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:34644537 |
GO_REF:0000024 GO_REF:0000107 MGI:6856556 |
NCBI chr 1:227,701,964...227,736,374
Ensembl chr 1:227,721,435...227,736,373
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L3mbtl3 |
L3MBTL histone methyl-lysine binding protein 3 |
acts_upstream_of_or_within |
ISO |
MGI:3579468 (PMID:15889154) |
RGD |
PMID:15889154 |
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NCBI chr 1:18,988,763...19,089,247
Ensembl chr 1:18,990,618...19,089,263
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Large1 |
LARGE xylosyl- and glucuronyltransferase 1 |
acts_upstream_of_or_within |
ISO |
MGI:1856965 (PMID:25661440) |
RGD |
PMID:25661440 |
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NCBI chr19:11,603,129...12,048,930
Ensembl chr19:11,603,129...12,048,930
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Nfix |
nuclear factor I X |
acts_upstream_of_or_within |
ISO |
MGI:3802570 (PMID:32183151) |
RGD |
PMID:32183151 |
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NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265
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Nkx2-3 |
NK2 homeobox 3 |
acts_upstream_of_or_within |
ISO |
MGI:2448069 (PMID:10926756) |
RGD |
PMID:10926756 |
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NCBI chr 1:242,478,130...242,481,083
Ensembl chr 1:242,478,130...242,481,083
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RT1-Db1 |
RT1 class II, locus Db1 |
involved_in |
ISO |
(PMID:24942581) |
RGD |
PMID:24942581 |
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NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258
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Sirt1 |
sirtuin 1 |
involved_in |
ISO IEA |
(MGI:5319292|PMID:22315447) GO_REF:0000107 |
RGD Ensembl |
PMID:22315447 |
GO_REF:0000107 MGI:5319292 |
NCBI chr20:25,307,225...25,329,273
Ensembl chr20:25,306,917...25,329,260
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Socs1 |
suppressor of cytokine signaling 1 |
involved_in |
ISO IEA |
(PMID:32634427) GO_REF:0000107 |
RGD Ensembl |
PMID:32634427 |
GO_REF:0000107 |
NCBI chr10:4,882,651...4,884,342
Ensembl chr10:4,882,560...4,884,383
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Spi1 |
Spi-1 proto-oncogene |
acts_upstream_of_or_within |
ISO |
(PMID:11980719) |
RGD |
PMID:11980719 |
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NCBI chr 3:77,059,744...77,093,730
Ensembl chr 3:77,073,012...77,092,393
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Spib |
Spi-B transcription factor |
acts_upstream_of_or_within |
ISO |
(PMID:11980719) |
RGD |
PMID:11980719 |
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NCBI chr 1:95,018,939...95,024,804
Ensembl chr 1:95,018,947...95,024,780
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Ucp2 |
uncoupling protein 2 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:6856556|PMID:34644537) |
UniProt RGD |
PMID:34644537 |
GO_REF:0000024 MGI:6856556 |
NCBI chr 1:154,839,242...154,845,612
Ensembl chr 1:154,839,209...154,845,611
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Vegfa |
vascular endothelial growth factor A |
involved_in |
ISO IEA |
(PMID:21149635) GO_REF:0000107 |
RGD Ensembl |
PMID:21149635 |
GO_REF:0000107 |
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
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Zbtb46 |
zinc finger and BTB domain containing 46 |
acts_upstream_of |
ISO |
MGI:5320483 (PMID:22615127) |
RGD |
PMID:22615127 |
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NCBI chr 3:168,497,294...168,567,799
Ensembl chr 3:168,499,583...168,568,782
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App |
amyloid beta precursor protein |
involved_in |
ISO IEA |
UniProtKB:P49768|UniProtKB:Q9QUN7 (PMID:22198949) GO_REF:0000107 |
RGD Ensembl |
PMID:22198949 |
GO_REF:0000107 |
NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
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Csf1r |
colony stimulating factor 1 receptor |
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IMP |
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RGD |
PMID:33450391 |
RGD:126781687 |
NCBI chr18:54,546,673...54,590,418
Ensembl chr18:54,546,659...54,590,415
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Itgam |
integrin subunit alpha M |
acts_upstream_of_or_within |
ISO |
(PMID:20578039) |
RGD |
PMID:20578039 |
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NCBI chr 1:182,659,047...182,709,501
Ensembl chr 1:182,659,000...182,709,503
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Nrros |
negative regulator of reactive oxygen species |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (MGI:6141908|PMID:28459434), (MGI:6192878|PMID:29909984) |
UniProt Ensembl RGD |
PMID:28459434 PMID:29909984 |
GO_REF:0000024 GO_REF:0000107 MGI:6141908 MGI:6192878 |
NCBI chr11:68,628,641...68,646,152
Ensembl chr11:68,628,712...68,646,142
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Tlr2 |
toll-like receptor 2 |
involved_in |
ISO |
UniProtKB:P05067|UniProtKB:P49768 (MGI:5307186|PMID:22198949) |
RGD |
PMID:22198949 |
MGI:5307186 |
NCBI chr 2:169,200,620...169,206,819
Ensembl chr 2:169,197,419...169,206,630
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Tspan2 |
tetraspanin 2 |
acts_upstream_of_or_within |
ISO |
MGI:5556057|MGI:97623 (PMID:24038504) |
RGD |
PMID:24038504 |
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NCBI chr 2:190,177,717...190,234,994
Ensembl chr 2:190,177,741...190,219,660
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Enpp1 |
ectonucleotide pyrophosphatase/phosphodiesterase 1 |
involved_in |
ISO |
MGI:1857079 (PMID:23717624) |
RGD |
PMID:23717624 |
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NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
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Gba1 |
glucosylceramidase beta 1 |
acts_upstream_of_or_within |
ISO |
(PMID:17954912) |
RGD |
PMID:17954912 |
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NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263
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Mfsd8 |
major facilitator superfamily domain containing 8 |
acts_upstream_of_or_within |
ISO |
(PMID:27654426) |
RGD |
PMID:27654426 |
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NCBI chr 2:123,822,042...123,847,808
Ensembl chr 2:123,816,614...123,857,971
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Myd88 |
MYD88, innate immune signal transduction adaptor |
acts_upstream_of_or_within |
ISO |
MGI:2385681 (PMID:18509511) |
RGD |
PMID:18509511 |
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NCBI chr 8:119,074,439...119,078,508
Ensembl chr 8:119,074,437...119,079,415
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Naglu |
N-acetyl-alpha-glucosaminidase |
acts_upstream_of_or_within |
ISO |
MGI:1934018 (PMID:18509511) |
RGD |
PMID:18509511 |
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NCBI chr10:86,001,545...86,009,049
Ensembl chr10:86,001,566...86,008,972
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Ndp |
norrin cystine knot growth factor NDP |
acts_upstream_of_or_within |
ISO |
MGI:2676199 (PMID:29654250) |
RGD |
PMID:29654250 |
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NCBI chr X:5,796,487...5,820,934
Ensembl chr X:5,796,487...5,820,934
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Nr3c1 |
nuclear receptor subfamily 3, group C, member 1 |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:29890290) |
Ensembl RGD |
PMID:29890290 |
GO_REF:0000107 |
NCBI chr18:31,271,681...31,393,320
Ensembl chr18:31,271,681...31,393,375
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Qki |
QKI, KH domain containing RNA binding |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (MGI:6514532|PMID:33378678) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:33378678 |
GO_REF:0000024 GO_REF:0000107 MGI:6514532 |
NCBI chr 1:50,387,716...50,501,568
Ensembl chr 1:50,387,698...50,498,831
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Tlr4 |
toll-like receptor 4 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1860885 (PMID:18509511) |
Ensembl RGD |
PMID:18509511 |
GO_REF:0000107 |
NCBI chr 5:80,145,867...80,159,501
Ensembl chr 5:80,145,826...80,159,628
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Vps13a |
vacuolar protein sorting 13 homolog A |
acts_upstream_of_or_within |
ISO |
(PMID:37714309) |
RGD |
PMID:37714309 |
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NCBI chr 1:213,901,999...214,128,638
Ensembl chr 1:213,901,999...214,128,555
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Vps54 |
VPS54 subunit of GARP complex |
involved_in |
IEA ISO |
GO_REF:0000107 MGI:1857091 (PMID:29890290) |
Ensembl RGD |
PMID:29890290 |
GO_REF:0000107 |
NCBI chr14:95,378,821...95,455,871
Ensembl chr14:95,378,012...95,455,857
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Adipoq |
adiponectin, C1Q and collagen domain containing |
involved_in |
ISO ISS |
(PMID:10961870) GO_REF:0000024 |
RGD UniProt |
PMID:10961870 |
GO_REF:0000024 |
NCBI chr11:77,721,912...77,735,644
Ensembl chr11:77,721,912...77,735,564
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C1qc |
complement C1q C chain |
involved_in |
ISO IEA |
(PMID:10961870) GO_REF:0000107 |
RGD Ensembl |
PMID:10961870 |
GO_REF:0000107 |
NCBI chr 5:149,127,412...149,130,757
Ensembl chr 5:149,127,415...149,131,017
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Gata2 |
GATA binding protein 2 |
acts_upstream_of_or_within |
ISO |
(PMID:16254139) |
RGD |
PMID:16254139 |
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NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761
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Mir486 |
microRNA 486 |
involved_in |
ISO |
(PMID:25857263) |
RGD |
PMID:25857263 |
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Ptpn2 |
protein tyrosine phosphatase, non-receptor type 2 |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (MGI:3629372|PMID:16705167) |
UniProt Ensembl RGD |
PMID:16705167 |
GO_REF:0000024 GO_REF:0000107 MGI:3629372 |
NCBI chr18:61,229,012...61,294,662
Ensembl chr18:61,229,014...61,294,627
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Qki |
QKI, KH domain containing RNA binding |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:22398723) |
UniProt RGD |
PMID:22398723 |
GO_REF:0000024 |
NCBI chr 1:50,387,716...50,501,568
Ensembl chr 1:50,387,698...50,498,831
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Thoc5 |
THO complex subunit 5 |
acts_upstream_of_or_within |
ISO |
(PMID:10597251) |
RGD |
PMID:10597251 |
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NCBI chr14:79,758,805...79,792,718
Ensembl chr14:79,758,917...79,792,718
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Zbtb46 |
zinc finger and BTB domain containing 46 |
acts_upstream_of_or_within |
ISO |
MGI:5320483 (PMID:22615127) |
RGD |
PMID:22615127 |
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NCBI chr 3:168,497,294...168,567,799
Ensembl chr 3:168,499,583...168,568,782
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Asxl2 |
ASXL transcriptional regulator 2 |
acts_upstream_of_or_within |
ISO |
(PMID:21490954) |
RGD |
PMID:21490954 |
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NCBI chr 6:26,425,017...26,514,899
Ensembl chr 6:26,425,954...26,507,477
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Calca |
calcitonin-related polypeptide alpha |
involved_in |
ISO |
(PMID:10822112) |
RGD |
PMID:10822112 |
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NCBI chr 1:168,878,212...168,883,176
Ensembl chr 1:168,878,214...168,883,105
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Casp8 |
caspase 8 |
involved_in |
ISO |
(PMID:17047155) |
RGD |
PMID:17047155 |
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NCBI chr 9:60,263,863...60,312,542
Ensembl chr 9:60,264,075...60,312,542
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Csf1 |
colony stimulating factor 1 |
involved_in acts_upstream_of_or_within |
ISO IBA IEA |
(PMID:2460758) MGI:1856333 (PMID:9215625) GO_REF:0000033 GO_REF:0000107 |
RGD GO_Central Ensembl |
PMID:2460758 PMID:9215625 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 2:195,377,215...195,396,608
Ensembl chr 2:195,377,215...195,411,704
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Csf2 |
colony stimulating factor 2 |
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TAS |
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RGD |
PMID:14504066 |
RGD:727979 |
NCBI chr10:38,386,945...38,388,926
Ensembl chr10:38,386,945...38,389,199
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Fadd |
Fas associated via death domain |
involved_in |
ISO |
(PMID:17047155) |
RGD |
PMID:17047155 |
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NCBI chr 1:199,743,200...199,745,746
Ensembl chr 1:199,739,994...199,745,653
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Hcls1 |
hematopoietic cell specific Lyn substrate 1 |
involved_in |
ISO |
(MGI:5448611|PMID:23001182) |
RGD |
PMID:23001182 |
MGI:5448611 |
NCBI chr11:63,817,482...63,840,943
Ensembl chr11:63,817,476...63,841,014
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Hsf1 |
heat shock transcription factor 1 |
involved_in |
ISO |
(PMID:24504023) |
RGD |
PMID:24504023 |
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NCBI chr 7:108,196,040...108,223,011
Ensembl chr 7:108,196,056...108,223,011
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Id2 |
inhibitor of DNA binding 2 |
acts_upstream_of_or_within |
ISO |
MGI:97874 (PMID:15616565) |
RGD |
PMID:15616565 |
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NCBI chr 6:41,740,556...41,742,393
Ensembl chr 6:41,728,946...41,744,400
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Il34 |
interleukin 34 |
involved_in |
ISO IBA IEA |
(PMID:23409120) GO_REF:0000033 GO_REF:0000107 |
RGD GO_Central Ensembl |
PMID:23409120 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr19:38,714,990...38,782,749
Ensembl chr19:38,714,991...38,764,000
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Lif |
LIF, interleukin 6 family cytokine |
acts_upstream_of_or_within |
ISO |
(PMID:7957045) |
RGD |
PMID:7957045 |
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NCBI chr14:79,131,049...79,140,486
Ensembl chr14:79,134,574...79,140,482
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Mir145 |
microRNA 145 |
acts_upstream_of |
ISO |
(PMID:30634164) |
RGD |
PMID:30634164 |
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NCBI chr18:55,099,640...55,099,727
Ensembl chr18:55,099,640...55,099,727
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Pf4 |
platelet factor 4 |
involved_in |
ISO |
(PMID:10666185) |
RGD |
PMID:10666185 |
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NCBI chr14:17,298,304...17,299,220
Ensembl chr14:17,298,308...17,299,365
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Prkca |
protein kinase C, alpha |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:5306334|PMID:9508782) |
UniProt RGD |
PMID:9508782 |
GO_REF:0000024 MGI:5306334 |
NCBI chr10:92,889,390...93,288,013
Ensembl chr10:92,894,012...93,288,012
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G |
Rb1 |
RB transcriptional corepressor 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:96397 (PMID:15616565) |
Ensembl RGD |
PMID:15616565 |
GO_REF:0000107 |
NCBI chr15:48,371,295...48,502,473
Ensembl chr15:48,371,296...48,502,302
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G |
Ripk1 |
receptor interacting serine/threonine kinase 1 |
involved_in |
ISO |
(PMID:17047155) |
RGD |
PMID:17047155 |
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NCBI chr17:30,839,639...30,871,824
Ensembl chr17:30,839,650...30,871,824
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G |
Ror2 |
receptor tyrosine kinase-like orphan receptor 2 |
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IMP |
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RGD |
PMID:25749876 |
RGD:11537353 |
NCBI chr17:11,972,830...12,148,152
Ensembl chr17:11,972,830...12,148,152
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G |
Trib1 |
tribbles pseudokinase 1 |
involved_in |
ISO |
(MGI:5488531|PMID:23515163) |
RGD |
PMID:23515163 |
MGI:5488531 |
NCBI chr 7:91,206,579...91,213,126
Ensembl chr 7:91,206,579...91,214,731
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G |
Tgfb1 |
transforming growth factor, beta 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:6192878|PMID:29909984) |
UniProt RGD |
PMID:29909984 |
GO_REF:0000024 MGI:6192878 |
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
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G |
Qki |
QKI, KH domain containing RNA binding |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:27029405) |
Ensembl RGD |
PMID:27029405 |
GO_REF:0000107 |
NCBI chr 1:50,387,716...50,501,568
Ensembl chr 1:50,387,698...50,498,831
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Term paths to the root
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