ONTOLOGY REPORT - ANNOTATIONS
Term: RNA splicing, via transesterification reactions with bulged adenosine as nucleophile
Accession: GO:0000377
browse the term
Definition: Splicing of RNA via a series of two transesterification reactions with a bulged adenosine residue from the intron branch point as the initiating nucleophile. When the initial RNA for the splicing reaction is a single molecule (cis splicing), the excised intron is released in a lariat structure.
Synonyms: related_synonym: lariat RNA biosynthesis; lariat RNA formation
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AABR07001435.1
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
Ensembl chr 1:43,640,876...43,641,875
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AABR07056845.1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
Ensembl chr 7:37,066,520...37,067,514
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Cdk13
cyclin-dependent kinase 13
involved_in
ISO
(MGI:3699439|PMID:17261272)
RGD
PMID:17261272
MGI:3699439
NCBI chr17:47,251,145...47,344,675
Ensembl chr17:47,251,163...47,341,721
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Celf4
CUGBP, Elav-like family member 4
acts_upstream_of_or_within
ISO
(PMID:19720736)
RGD
PMID:19720736
NCBI chr18:16,786,578...17,065,045
Ensembl chr18:16,786,867...17,064,786
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Ddx17
DEAD-box helicase 17
involved_in
ISO IBA
(PMID:24275493), (PMID:24910439) GO_REF:0000033 (MGI:5883203|PMID:24910439)
RGD GO_Central
PMID:24275493 PMID:24910439
GO_REF:0000033 MGI:5883203
NCBI chr 7:111,091,127...111,109,353
Ensembl chr 7:111,089,445...111,109,193
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Ddx5
DEAD-box helicase 5
involved_in
ISO IBA
(PMID:24275493), (PMID:24910439) GO_REF:0000033 (MGI:5883203|PMID:24910439)
RGD GO_Central
PMID:24275493 PMID:24910439
GO_REF:0000033 MGI:5883203
NCBI chr10:91,723,508...91,732,210
Ensembl chr10:91,723,508...91,732,283
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Dhx9
DExH-box helicase 9
involved_in
ISO
(PMID:28221134)
RGD
PMID:28221134
NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069
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Esrp1
epithelial splicing regulatory protein 1
acts_upstream_of_or_within
ISO
MGI:1924661 (PMID:26371508)
RGD
PMID:26371508
NCBI chr 5:24,427,611...24,482,157
Ensembl chr 5:24,428,717...24,482,062
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Esrp2
epithelial splicing regulatory protein 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1917326 (PMID:26371508)
Ensembl RGD
PMID:26371508
GO_REF:0000107
NCBI chr19:34,034,559...34,041,726
Ensembl chr19:34,034,559...34,041,726
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Hnrnpa1
heterogeneous nuclear ribonucleoprotein A1
acts_upstream_of_or_within
ISO
(PMID:15798186)
RGD
PMID:15798186
NCBI chr 7:134,375,318...134,381,610
Ensembl chr 7:134,375,150...134,381,609
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Hnrnpm
heterogeneous nuclear ribonucleoprotein M
involved_in
ISO
(PMID:19874820)
RGD
PMID:19874820
NCBI chr 7:14,438,703...14,476,781
Ensembl chr 7:14,438,688...14,476,762
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Mbnl1
muscleblind-like splicing regulator 1
acts_upstream_of_or_within
ISO
MGI:3052922 (PMID:19075228), (PMID:19720736)
RGD
PMID:19075228 PMID:19720736
NCBI chr 2:144,639,819...144,814,395
Ensembl chr 2:144,670,285...144,814,368
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Pqbp1
polyglutamine binding protein 1
involved_in
ISO IBA ISS
(PMID:23512658) GO_REF:0000033 (MGI:5477858|PMID:23512658) GO_REF:0000024
RGD GO_Central UniProt
PMID:23512658
GO_REF:0000024 GO_REF:0000033 MGI:5477858
NCBI chr X:14,603,516...14,608,091
Ensembl chr X:14,603,539...14,608,087
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Puf60
poly-U binding splicing factor 60
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:107,782,799...107,793,759
Ensembl chr 7:107,782,770...107,794,531
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Rbm17
RNA binding motif protein 17
involved_in
ISO IBA
(PMID:17589525) GO_REF:0000033
RGD GO_Central
PMID:17589525
GO_REF:0000033
NCBI chr17:66,937,140...66,954,034
Ensembl chr17:66,937,140...66,954,014
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Rsrc1
arginine and serine rich coiled-coil 1
involved_in acts_upstream_of_or_within
IEA ISO IBA
GO_REF:0000002 (PMID:15798186) GO_REF:0000033
InterPro RGD GO_Central
PMID:15798186
GO_REF:0000002 GO_REF:0000033
NCBI chr 2:151,226,821...151,632,771
Ensembl chr 2:151,231,156...151,632,765
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Sfpq
splicing factor proline and glutamine rich
involved_in
ISO IBA
(PMID:19874820) GO_REF:0000033
RGD GO_Central
PMID:19874820
GO_REF:0000033
NCBI chr 5:139,338,034...139,353,476
Ensembl chr 5:139,338,075...139,353,472
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Sfswap
splicing factor SWAP
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:8940107)
Ensembl RGD
PMID:8940107
GO_REF:0000107
NCBI chr12:27,109,607...27,179,941
Ensembl chr12:27,109,611...27,179,884
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Slu7
SLU7 homolog, splicing factor
involved_in
ISO ISS
(PMID:15728250) PMID:15181151
RGD
PMID:15728250 PMID:15181151
RGD:1304333
NCBI chr10:27,908,325...27,923,784
Ensembl chr10:27,908,396...27,923,349
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Smptb
polypyrimidine tract-binding protein
IDA
RGD
PMID:12578833
RGD:1299129
NCBI chr X:16,609,016...16,610,898
Ensembl chr X:16,606,597...16,610,874
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Srsf1
serine and arginine rich splicing factor 1
involved_in
IMP IBA ISO
GO_REF:0000033 (PMID:8940107)
GO_Central RGD
PMID:8940107 PMID:23462647
GO_REF:0000033, RGD:11038736
NCBI chr10:72,838,926...72,859,066
Ensembl chr10:72,839,274...72,845,336
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Srsf6
serine and arginine rich splicing factor 6
involved_in
ISS ISO
GO_REF:0000024 (PMID:22767602)
UniProt RGD
PMID:22767602
GO_REF:0000024
NCBI chr 3:151,589,546...151,594,869
Ensembl chr 3:151,589,535...151,594,860
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Srsf9
serine and arginine rich splicing factor 9
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr12:41,278,225...41,284,502
Ensembl chr12:41,275,687...41,284,499
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Strap
serine/threonine kinase receptor associated protein
involved_in
ISO
(PMID:33230114)
RGD
PMID:33230114
NCBI chr 4:170,646,042...170,660,291
Ensembl chr 4:170,646,001...170,660,828
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LOC134482366
splicing factor YJU2-like
involved_in
IEA
GO_REF:0000104
UniProt
GO_REF:0000104
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Xab2
XPA binding protein 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr12:1,667,672...1,679,702
Ensembl chr12:1,667,672...1,679,692
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Yju2
YJU2 splicing factor
involved_in
IEA
GO_REF:0000104
UniProt
GO_REF:0000104
NCBI chr 9:789,603...799,505
Ensembl chr 9:789,606...799,496
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Isy1
ISY1 splicing factor homolog
involved_in
IEA IBA
GO_REF:0000002 GO_REF:0000033
InterPro GO_Central
GO_REF:0000002 GO_REF:0000033
NCBI chr 4:120,276,535...120,297,227
Ensembl chr 4:120,276,292...120,297,188
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Prpf18
pre-mRNA processing factor 18
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr17:73,630,560...73,661,210
Ensembl chr17:73,630,571...73,690,979
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Isy1
ISY1 splicing factor homolog
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:120,276,535...120,297,227
Ensembl chr 4:120,276,292...120,297,188
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Slu7
SLU7 homolog, splicing factor
involved_in
ISO ISS
(PMID:15728250) PMID:15181151
RGD
PMID:15728250 PMID:15181151
RGD:1304333
NCBI chr10:27,908,325...27,923,784
Ensembl chr10:27,908,396...27,923,349
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ENSRNOG00000066758
involved_in
IEA
GO_REF:0000104
UniProt
GO_REF:0000104
Ensembl chr X:14,995,412...14,996,454
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LOC120099250
U1 small nuclear ribonucleoprotein C-like
involved_in
IEA
GO_REF:0000104
UniProt
GO_REF:0000104
NCBI chr X:135,673,708...135,678,865
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Prpf39
pre-mRNA processing factor 39
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 6:83,088,981...83,113,826
Ensembl chr 6:83,088,986...83,113,825
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Psip1
PC4 and SRSF1 interacting protein 1
involved_in
ISO IEA ISS
(PMID:9885563) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:9885563
GO_REF:0000024 GO_REF:0000107
NCBI chr 5:97,847,010...97,879,280
Ensembl chr 5:97,847,015...97,879,257
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Sfswap
splicing factor SWAP
involved_in acts_upstream_of_or_within
IEA ISO IBA
GO_REF:0000107 (PMID:8940107) GO_REF:0000033
Ensembl RGD GO_Central
PMID:8940107
GO_REF:0000033 GO_REF:0000107
NCBI chr12:27,109,607...27,179,941
Ensembl chr12:27,109,611...27,179,884
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Snrpc
small nuclear ribonucleoprotein polypeptide C
involved_in
IEA IBA
GO_REF:0000104 GO_REF:0000033
UniProt GO_Central
GO_REF:0000033 GO_REF:0000104
NCBI chr20:5,888,453...5,906,638
Ensembl chr20:5,888,453...5,906,638
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Srsf1
serine and arginine rich splicing factor 1
involved_in
ISO
(PMID:8940107), (PMID:9885563)
RGD
PMID:8940107 PMID:9885563
NCBI chr10:72,838,926...72,859,066
Ensembl chr10:72,839,274...72,845,336
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Srsf12
serine and arginine rich splicing factor 12
involved_in
ISO
(PMID:11684676)
RGD
PMID:11684676
NCBI chr 5:47,606,526...47,631,509
Ensembl chr 5:47,606,285...47,629,778
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C3h9orf78
similar to human chromosome 9 open reading frame 78
involved_in
ISO
(PMID:35241646)
RGD
PMID:35241646
NCBI chr 3:14,264,262...14,272,552
Ensembl chr 3:14,264,083...14,272,764
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Cactin
cactin, spliceosome C complex subunit
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:8,391,396...8,397,219
Ensembl chr 7:8,391,397...8,396,829
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Clns1a
chloride nucleotide-sensitive channel 1A
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:152,019,369...152,039,670
Ensembl chr 1:152,019,378...152,039,661
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Cwc15
CWC15 spliceosome-associated protein
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:11,305,401...11,316,326
Ensembl chr 8:11,305,424...11,316,325
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Dcps
decapping enzyme, scavenger
involved_in
ISS ISO
GO_REF:0000024 (PMID:18426921)
UniProt RGD
PMID:18426921
GO_REF:0000024
NCBI chr 8:33,468,669...33,524,407
Ensembl chr 8:33,415,671...33,524,389
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Ncbp2
nuclear cap binding protein subunit 2
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 GO_REF:0000002 (PMID:18426921)
UniProt Ensembl InterPro RGD
PMID:18426921
GO_REF:0000002 GO_REF:0000024 GO_REF:0000107
NCBI chr11:68,821,026...68,829,863
Ensembl chr11:68,817,740...68,851,885
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Prpf40a
pre-mRNA processing factor 40 homolog A
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 3:37,625,585...37,689,859
Ensembl chr 3:37,627,690...37,690,886
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Prpf40b
pre-mRNA processing factor 40 homolog B
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 7:130,392,611...130,454,053
Ensembl chr 7:130,432,112...130,454,052
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Prpf4b
pre-mRNA processing factor 4B
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr17:29,985,343...30,020,285
Ensembl chr17:29,985,343...30,019,625
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Rbm17
RNA binding motif protein 17
involved_in
IEA
GO_REF:0000104
UniProt
GO_REF:0000104
NCBI chr17:66,937,140...66,954,034
Ensembl chr17:66,937,140...66,954,014
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Rbm22
RNA binding motif protein 22
involved_in
ISO ISS
(PMID:22246180) GO_REF:0000024
RGD UniProt
PMID:22246180
GO_REF:0000024
NCBI chr18:54,013,374...54,024,182
Ensembl chr18:54,013,351...54,024,569
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Sart1
spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:202,690,472...202,699,136
Ensembl chr 1:202,690,459...202,699,136
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Sde2
SDE2 telomere maintenance homolog
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:34365507) GO_REF:0000024
Ensembl RGD UniProt
PMID:34365507
GO_REF:0000024 GO_REF:0000107
NCBI chr13:92,578,843...92,595,142
Ensembl chr13:92,578,874...92,595,140
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Sf3a1
splicing factor 3A subunit 1
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr14:79,031,394...79,052,144
Ensembl chr14:79,031,394...79,052,144
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Wbp4
WW domain binding protein 4
involved_in
ISO IEA ISS
(PMID:19592703) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:19592703
GO_REF:0000024 GO_REF:0000107
NCBI chr15:54,862,700...54,890,668
Ensembl chr15:54,862,843...54,890,647
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Celf1
CUGBP, Elav-like family member 1
involved_in acts_upstream_of_or_within
ISO IBA IEA
(PMID:11158314) GO_REF:0000033 GO_REF:0000107
RGD GO_Central Ensembl
PMID:11158314
GO_REF:0000033 GO_REF:0000107
NCBI chr 3:76,924,591...76,999,429
Ensembl chr 3:76,924,613...76,999,426
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Celf2
CUGBP, Elav-like family member 2
involved_in acts_upstream_of_or_within
ISO IBA IEA
(PMID:11158314) GO_REF:0000033 GO_REF:0000107
RGD GO_Central Ensembl
PMID:11158314
GO_REF:0000033 GO_REF:0000107
NCBI chr17:70,904,462...71,729,072
Ensembl chr17:71,210,853...71,728,333
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Celf3
CUGBP, Elav-like family member 3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 2:182,116,034...182,130,163
Ensembl chr 2:182,116,073...182,130,163
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Celf4
CUGBP, Elav-like family member 4
acts_upstream_of_or_within
ISO
(PMID:11158314)
RGD
PMID:11158314
NCBI chr18:16,786,578...17,065,045
Ensembl chr18:16,786,867...17,064,786
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Celf5
CUGBP, Elav-like family member 5
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:8,225,787...8,250,322
Ensembl chr 7:8,225,825...8,250,322
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Celf6
CUGBP, Elav-like family member 6
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:59,975,095...60,006,060
Ensembl chr 8:59,975,088...60,005,041
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Khdc4
KH domain containing 4, pre-mRNA splicing factor
involved_in
ISO
(PMID:19641227)
RGD
PMID:19641227
NCBI chr 2:174,149,059...174,177,816
Ensembl chr 2:174,149,141...174,177,504
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Luc7l
LUC7-like
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:15,273,340...15,307,131
Ensembl chr10:15,273,348...15,303,112
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Luc7l2
LUC7-like 2 pre-mRNA splicing factor
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:67,287,593...67,347,986
Ensembl chr 4:67,287,640...67,347,964
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Luc7l3
LUC7-like 3 pre-mRNA splicing factor
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:79,240,050...79,276,555
Ensembl chr10:79,240,563...79,276,538
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Mbnl1
muscleblind-like splicing regulator 1
acts_upstream_of_or_within
ISO
MGI:3052922 (PMID:14671308), (PMID:16717059)
RGD
PMID:14671308 PMID:16717059
NCBI chr 2:144,639,819...144,814,395
Ensembl chr 2:144,670,285...144,814,368
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Nol3
nucleolar protein 3
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:10196175)
UniProt Ensembl RGD
PMID:10196175
GO_REF:0000024 GO_REF:0000107
NCBI chr19:33,154,061...33,158,250
Ensembl chr19:33,154,062...33,158,250
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Ptbp2
polypyrimidine tract binding protein 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:4124189 (PMID:10829067), (PMID:22802532)
Ensembl RGD
PMID:10829067 PMID:22802532
GO_REF:0000107
NCBI chr 2:207,812,659...207,874,019
Ensembl chr 2:207,812,920...207,873,506
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Puf60
poly-U binding splicing factor 60
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:107,782,799...107,793,759
Ensembl chr 7:107,782,770...107,794,531
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Rbmx
RNA binding motif protein, X-linked
IMP
RGD
PMID:19282290
RGD:2316827
NCBI chr X:135,305,237...135,314,806
Ensembl chr X:135,305,325...135,314,743
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Rbmxl1
Rbmx like 1
involved_in
IDA
PMID:19282290
UniProt
PMID:19282290
RGD:2316827
NCBI chr19:29,407,902...29,411,519
Ensembl chr19:29,407,912...29,412,859
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Setx
senataxin
involved_in
ISO
(PMID:19515850)
RGD
PMID:19515850
NCBI chr 3:12,428,091...12,480,801
Ensembl chr 3:12,427,635...12,480,803
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Srsf10
serine and arginine rich splicing factor 10
involved_in
ISO
(PMID:9774382)
RGD
PMID:9774382
NCBI chr 5:148,088,759...148,102,964
Ensembl chr 5:148,088,823...148,101,768
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Srsf6
serine and arginine rich splicing factor 6
involved_in
ISS ISO
GO_REF:0000024 (PMID:12549914)
UniProt RGD
PMID:12549914
GO_REF:0000024
NCBI chr 3:151,589,546...151,594,869
Ensembl chr 3:151,589,535...151,594,860
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Ythdc1
YTH N6-methyladenosine RNA binding protein C1
involved_in
ISS ISO
GO_REF:0000024 (PMID:20167602)
UniProt RGD
PMID:20167602
GO_REF:0000024
NCBI chr14:21,185,438...21,215,934
Ensembl chr14:21,185,440...21,216,028
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AABR07037800.1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
Ensembl chr X:29,333,112...29,334,044
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AABR07042226.1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
Ensembl chr X:144,806,986...144,812,552
G
AABR07048397.1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
Ensembl chr 2:246,755,907...246,757,455
G
AC109707.1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
Ensembl chr14:43,128,814...43,130,403
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AC126899.1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
Ensembl chr19:40,146,975...40,147,500
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Aqr
aquarius intron-binding spliceosomal factor
involved_in
ISO
(PMID:28076346)
RGD
PMID:28076346
NCBI chr 3:100,874,987...100,945,026
Ensembl chr 3:100,874,987...100,945,044
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Bcas2
BCAS2, pre-mRNA processing factor
involved_in
ISO
(PMID:28076346)
RGD
PMID:28076346
NCBI chr 2:190,692,503...190,700,386
Ensembl chr 2:190,692,461...190,700,389
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Bud13
BUD13 homolog
involved_in
ISO IBA IEA ISS
(PMID:29360106) GO_REF:0000033 GO_REF:0000107 GO_REF:0000024
RGD GO_Central Ensembl UniProt
PMID:29360106
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr 8:46,575,124...46,590,964
Ensembl chr 8:46,575,115...46,590,958
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Bud31
BUD31 homolog
involved_in
ISO IBA
(PMID:28076346) GO_REF:0000033
RGD GO_Central
PMID:28076346
GO_REF:0000033
NCBI chr12:9,462,838...9,470,387
Ensembl chr12:9,462,441...9,470,509
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C3h9orf78
similar to human chromosome 9 open reading frame 78
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:14,264,262...14,272,552
Ensembl chr 3:14,264,083...14,272,764
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Cactin
cactin, spliceosome C complex subunit
involved_in
ISO
(PMID:28062851)
RGD
PMID:28062851
NCBI chr 7:8,391,396...8,397,219
Ensembl chr 7:8,391,397...8,396,829
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Casc3
CASC3 exon junction complex subunit
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:29301961)
UniProt Ensembl RGD
PMID:29301961
GO_REF:0000024 GO_REF:0000107
NCBI chr10:83,769,014...83,788,966
Ensembl chr10:83,769,001...83,788,966
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Cdc40
cell division cycle 40
involved_in
ISO IBA
(PMID:28076346), (PMID:33220177) GO_REF:0000033
RGD GO_Central
PMID:28076346 PMID:33220177
GO_REF:0000033
NCBI chr20:44,273,080...44,325,605
Ensembl chr20:44,273,089...44,325,358
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Cdc5l
cell division cycle 5-like
involved_in
ISO IBA IEA ISS
(PMID:28076346) GO_REF:0000033 GO_REF:0000107 GO_REF:0000002 GO_REF:0000024
RGD GO_Central Ensembl InterPro UniProt
PMID:28076346
GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr 9:15,564,949...15,603,453
Ensembl chr 9:15,564,767...15,603,450
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Cenatac
centrosomal AT-AC splicing factor
involved_in
ISO
(PMID:34009673)
RGD
PMID:34009673
NCBI chr 8:44,735,968...44,742,859
Ensembl chr 8:44,735,972...44,742,837
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Crnkl1
crooked neck pre-mRNA splicing factor 1
involved_in
ISO IBA IEA ISS
(PMID:28076346) GO_REF:0000033 GO_REF:0000002 GO_REF:0000024
RGD GO_Central InterPro UniProt
PMID:28076346
GO_REF:0000002 GO_REF:0000024 GO_REF:0000033
NCBI chr 3:133,338,593...133,354,329
Ensembl chr 3:133,337,039...133,354,302 Ensembl chr 6:133,337,039...133,354,302
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Cwc15
CWC15 spliceosome-associated protein
involved_in
ISS ISO
GO_REF:0000024 (PMID:28076346)
UniProt RGD
PMID:28076346
GO_REF:0000024
NCBI chr 8:11,305,401...11,316,326
Ensembl chr 8:11,305,424...11,316,325
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Cwc22
CWC22 spliceosome associated protein
involved_in
ISO IBA
(PMID:29360106) GO_REF:0000033
RGD GO_Central
PMID:29360106
GO_REF:0000033
NCBI chr 3:62,815,230...62,864,269
Ensembl chr 3:62,802,045...62,864,228
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Cwc25
CWC25 spliceosome-associated protein homolog
involved_in
ISO IBA
(PMID:29301961) GO_REF:0000033
RGD GO_Central
PMID:29301961
GO_REF:0000033
NCBI chr10:82,735,698...82,760,373
Ensembl chr10:82,736,995...82,760,354
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Cwf19l1
CWF19 like cell cycle control factor 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:242,997,720...243,020,989
Ensembl chr 1:242,997,726...243,020,961
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Cwf19l2
CWF19 like cell cycle control factor 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 6:290,148...356,636
Ensembl chr 6:281,685...356,604
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Dbr1
debranching RNA lariats 1
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:10982890)
GO_Central RGD
PMID:10982890
GO_REF:0000033
NCBI chr 8:100,139,039...100,150,768
Ensembl chr 8:100,139,034...100,151,030
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Ddx23
DEAD-box helicase 23
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:129,797,620...129,814,909
Ensembl chr 7:129,797,614...129,814,949
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Ddx39a
DExD-box helicase 39A
involved_in
ISO IBA IEA
UniProtKB:Q07478 (PMID:15047853) GO_REF:0000033 GO_REF:0000107
RGD GO_Central Ensembl
PMID:15047853
GO_REF:0000033 GO_REF:0000107
NCBI chr19:24,418,743...24,427,422
Ensembl chr19:24,418,114...24,426,954
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Ddx39b
DExD-box helicase 39B
involved_in
ISO IBA
UniProtKB:Q07478 (PMID:15047853) GO_REF:0000033
RGD GO_Central
PMID:15047853
GO_REF:0000033
NCBI chr20:3,547,702...3,585,064
Ensembl chr20:3,572,056...3,584,996
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Ddx41
DEAD-box helicase 41
involved_in
ISO IBA
(PMID:25920683) GO_REF:0000033
RGD GO_Central
PMID:25920683
GO_REF:0000033
NCBI chr17:9,102,926...9,108,415
Ensembl chr17:9,103,010...9,108,415
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Ddx41l1
DEAD-box helicase 41 like 1
involved_in
IEA IBA
GO_REF:0000002 GO_REF:0000033
InterPro GO_Central
GO_REF:0000002 GO_REF:0000033
NCBI chr 6:107,185,923...107,187,961
Ensembl chr 6:107,186,096...107,187,961
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Ddx46
DEAD-box helicase 46
involved_in
ISS IBA ISO
GO_REF:0000024 GO_REF:0000033 (PMID:32494006), (PMID:34822310), (PMID:36797247)
UniProt GO_Central RGD
PMID:32494006 PMID:34822310 PMID:36797247
GO_REF:0000024 GO_REF:0000033
NCBI chr17:8,942,070...8,988,440
Ensembl chr17:8,944,454...8,988,439
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Dhx16
DEAH-box helicase 16
involved_in
ISO
(PMID:20423332), (PMID:25296192), (PMID:29360106)
RGD
PMID:20423332 PMID:25296192 PMID:29360106
NCBI chr20:2,862,000...2,874,991
Ensembl chr20:2,862,000...2,874,948
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Dhx38
DEAH-box helicase 38
involved_in
ISO IBA
(PMID:9524131) GO_REF:0000033
RGD GO_Central
PMID:9524131
GO_REF:0000033
NCBI chr19:37,512,893...37,530,135
Ensembl chr19:37,512,891...37,530,140
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Dhx8
DEAH-box helicase 8
involved_in
ISO
(PMID:28076346)
RGD
PMID:28076346
NCBI chr10:86,667,641...86,704,198
Ensembl chr10:86,667,834...86,705,137
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Eftud2
elongation factor Tu GTP binding domain containing 2
involved_in
ISO IBA
(PMID:28076346) GO_REF:0000033
RGD GO_Central
PMID:28076346
GO_REF:0000033
NCBI chr10:87,804,893...87,852,181
Ensembl chr10:87,804,892...87,846,079
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Eif4a3
eukaryotic translation initiation factor 4A3
involved_in
ISS IBA ISO
GO_REF:0000024 GO_REF:0000033 (PMID:29301961)
UniProt GO_Central RGD
PMID:29301961
GO_REF:0000024 GO_REF:0000033
NCBI chr10:104,549,038...104,559,032
Ensembl chr10:104,549,038...104,559,057
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ENSRNOG00000063412
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
Ensembl chr X:133,163,165...133,163,784
G
ENSRNOG00000065450
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
Ensembl chr18:73,476,936...73,477,748
G
ENSRNOG00000069332
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
Ensembl chr 2:89,339,501...89,339,701
G
Ess2
ess-2 splicing factor homolog
involved_in
ISO
(PMID:34694367)
RGD
PMID:34694367
NCBI chr11:83,075,893...83,085,849
Ensembl chr11:83,075,925...83,084,846
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Fra10ac1
FRA10A associated CGG repeat 1
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:34694367)
UniProt Ensembl RGD
PMID:34694367
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:235,969,071...236,001,074
Ensembl chr 1:235,969,112...236,001,210
G
Gcfc2
GC-rich sequence DNA-binding factor 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:114,481,613...114,519,268
Ensembl chr 4:114,481,607...114,519,962
G
Gpkow
G patch domain and KOW motifs
involved_in
ISO IBA
(PMID:25296192) GO_REF:0000033
RGD GO_Central
PMID:25296192
GO_REF:0000033
NCBI chr X:14,791,601...14,806,384
Ensembl chr X:14,791,610...14,806,384
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Hars2
histidyl-tRNA synthetase 2, mitochondrial
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr18:28,398,790...28,408,075
Ensembl chr18:28,398,795...28,414,747
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Hnrnpa1
heterogeneous nuclear ribonucleoprotein A1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:134,375,318...134,381,610
Ensembl chr 7:134,375,150...134,381,609
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Hnrnpa2b1
heterogeneous nuclear ribonucleoprotein A2/B1
involved_in
ISS IBA IEA ISO
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 (PMID:26321680)
UniProt GO_Central Ensembl RGD
PMID:26321680
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr 4:80,534,659...80,545,297
Ensembl chr 4:80,534,651...80,545,249
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Hnrnpa3
heterogeneous nuclear ribonucleoprotein A3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:60,578,574...60,588,755
Ensembl chr 3:60,578,673...60,588,306
G
Hnrnpc
heterogeneous nuclear ribonucleoprotein C
involved_in
ISO ISS
(PMID:25719671) GO_REF:0000024
RGD UniProt
PMID:25719671
GO_REF:0000024
NCBI chr15:24,779,593...24,809,213
Ensembl chr15:24,779,450...24,809,183
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Htatsf1
HIV-1 Tat specific factor 1
involved_in
ISO
(PMID:32494006), (PMID:34822310), (PMID:36797247)
RGD
PMID:32494006 PMID:34822310 PMID:36797247
NCBI chr X:134,935,426...134,949,607
Ensembl chr X:134,935,426...134,949,607
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Ik
IK cytokine
involved_in
ISO IBA ISS
(PMID:28781166) GO_REF:0000033 GO_REF:0000024
RGD GO_Central UniProt
PMID:28781166
GO_REF:0000024 GO_REF:0000033
NCBI chr18:28,358,004...28,372,809
Ensembl chr18:28,357,977...28,378,832
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Isy1
ISY1 splicing factor homolog
involved_in
ISO ISS
(PMID:29301961) GO_REF:0000024
RGD UniProt
PMID:29301961
GO_REF:0000024
NCBI chr 4:120,276,535...120,297,227
Ensembl chr 4:120,276,292...120,297,188
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LOC100911361
heterogeneous nuclear ribonucleoprotein A3-like
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:78,217,733...78,219,237
Ensembl chr10:78,217,761...78,218,895
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LOC100912568
probable ATP-dependent RNA helicase DDX41-like
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 6:107,230,038...107,231,786
Ensembl chr 6:107,226,563...107,244,212
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LOC102548514
crooked neck-like protein 1-like
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
Ensembl chr 6:1,140,615...1,142,918
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LOC120096281
heterogeneous nuclear ribonucleoprotein A3-like
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr13:65,940,732...65,942,250
Ensembl chr13:65,941,100...65,942,227
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Lsm2
LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
involved_in
ISO IBA
(PMID:28781166) GO_REF:0000033
RGD GO_Central
PMID:28781166
GO_REF:0000033
NCBI chr20:3,843,467...3,847,217
Ensembl chr20:3,843,466...3,847,266
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Lsm3
LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated
involved_in acts_upstream_of_or_within
ISO IBA
(PMID:28781166) GO_REF:0000033 (PMID:10369684), (PMID:10523320)
RGD GO_Central
PMID:10369684 PMID:10523320 PMID:28781166
GO_REF:0000033
NCBI chr 4:124,021,023...124,027,269
Ensembl chr 4:124,021,023...124,027,269
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Lsm4
LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
involved_in
ISO
(PMID:28781166)
RGD
PMID:28781166
NCBI chr16:18,755,481...18,761,106
Ensembl chr16:18,755,484...18,760,926
G
Lsm5
LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
involved_in
ISO IBA
(PMID:28781166) GO_REF:0000033
RGD GO_Central
PMID:28781166
GO_REF:0000033
NCBI chr 4:85,951,073...85,954,289
Ensembl chr 6:104,652,477...104,654,165 Ensembl chr 4:104,652,477...104,654,165
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Lsm5l1
LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated like 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr16:1,339,769...1,340,198
Ensembl chr16:1,339,784...1,340,056
G
Lsm6
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
involved_in
ISO IBA
(PMID:28781166) GO_REF:0000033
RGD GO_Central
PMID:28781166
GO_REF:0000033
NCBI chr19:29,098,254...29,112,858
Ensembl chr13:42,114,032...42,116,484 Ensembl chr19:42,114,032...42,116,484
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Lsm6l1
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated like 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr13:42,114,013...42,116,559
Ensembl chr13:42,114,032...42,116,484
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Lsm7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
involved_in
ISO
(PMID:28781166)
RGD
PMID:28781166
NCBI chr 7:8,856,698...8,859,113
Ensembl chr 7:8,856,489...8,859,119
G
Lsm8
LSM8 homolog, U6 small nuclear RNA associated
involved_in
ISO IBA
(PMID:28781166) GO_REF:0000033
RGD GO_Central
PMID:28781166
GO_REF:0000033
NCBI chr 4:47,306,259...47,312,125
Ensembl chr 4:47,306,295...47,314,293
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Magohb
mago homolog B, exon junction complex subunit
involved_in
ISO
(PMID:28502770)
RGD
PMID:28502770
NCBI chr 4:165,034,131...165,041,977
Ensembl chr 4:165,034,122...165,041,967
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Mettl14
methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit
involved_in
ISO
(PMID:25719671)
RGD
PMID:25719671
NCBI chr 2:211,530,598...211,546,845
Ensembl chr 2:211,530,602...211,546,821
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Mettl3
methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit
involved_in NOT|involved_in
ISO
(PMID:25719671), (PMID:26321680) (MGI:5621227|PMID:25569111) (MGI:6095345|PMID:28637692)
RGD
PMID:25569111 PMID:25719671 PMID:26321680 PMID:28637692
MGI:5621227 MGI:6095345
NCBI chr15:25,002,505...25,014,097
Ensembl chr15:25,003,172...25,014,041
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Mfap1a
microfibrillar-associated protein 1A
involved_in
ISO
(PMID:28781166)
RGD
PMID:28781166
NCBI chr 3:108,440,163...108,456,744
Ensembl chr 3:108,438,845...108,456,750
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Ncbp2
nuclear cap binding protein subunit 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr11:68,821,026...68,829,863
Ensembl chr11:68,817,740...68,851,885
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Nhp2
NHP2 ribonucleoprotein
involved_in
IEA
GO_REF:0000104
UniProt
GO_REF:0000104
NCBI chr10:35,877,057...35,880,399
Ensembl chr10:35,877,054...35,882,545
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Nova1
NOVA alternative splicing regulator 1
involved_in acts_upstream_of_or_within
IEA ISO IBA
GO_REF:0000107 MGI:2386947 (PMID:10719891) GO_REF:0000033
Ensembl RGD GO_Central
PMID:10719891
GO_REF:0000033 GO_REF:0000107
NCBI chr 6:63,780,105...63,905,567
Ensembl chr 6:63,783,489...63,906,289
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Nova2
NOVA alternative splicing regulator 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:78,572,253...78,613,703
Ensembl chr 1:78,572,279...78,608,021
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Paxbp1
PAX3 and PAX7 binding protein 1
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr11:30,272,037...30,301,504
Ensembl chr11:30,272,037...30,301,648
G
Phf5a
PHD finger protein 5A
involved_in
ISS IBA ISO IEA
GO_REF:0000024 GO_REF:0000033 (PMID:12234937), (PMID:27720643), (PMID:29360106), (PMID:32494006), (PMID:34822310), (PMID:36797247) GO_REF:0000002
UniProt GO_Central RGD InterPro
PMID:12234937 PMID:27720643 PMID:29360106 PMID:32494006 PMID:34822310 PMID:36797247 More...
GO_REF:0000002 GO_REF:0000024 GO_REF:0000033
NCBI chr 7:113,378,469...113,385,035
Ensembl chr 7:113,378,471...113,385,460
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Plrg1
pleiotropic regulator 1
involved_in
ISO IBA IEA ISS
(PMID:28076346) GO_REF:0000033 GO_REF:0000107 GO_REF:0000002 GO_REF:0000024
RGD GO_Central Ensembl InterPro UniProt
PMID:28076346
GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr 2:168,408,139...168,424,470
Ensembl chr 2:168,408,124...168,424,522
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Ppie
peptidylprolyl isomerase E
involved_in
ISO
(PMID:28076346)
RGD
PMID:28076346
NCBI chr 5:135,406,172...135,419,332
Ensembl chr 5:135,406,176...135,419,235
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Ppil1
peptidylprolyl isomerase like 1
involved_in
ISO
(PMID:28076346), (PMID:33220177)
RGD
PMID:28076346 PMID:33220177
NCBI chr20:7,302,292...7,322,349
Ensembl chr20:7,302,621...7,322,354
G
Prpf19
pre-mRNA processing factor 19
involved_in
ISO IBA IEA ISS
(PMID:20176811) GO_REF:0000033 GO_REF:0000002 GO_REF:0000024
RGD GO_Central InterPro UniProt
PMID:20176811
GO_REF:0000002 GO_REF:0000024 GO_REF:0000033
NCBI chr 1:207,541,582...207,552,664
Ensembl chr 1:207,541,595...207,552,662
G
Prpf3
pre-mRNA processing factor 3
involved_in
ISO IBA
(PMID:28781166) GO_REF:0000033
RGD GO_Central
PMID:28781166
GO_REF:0000033
NCBI chr 2:183,379,041...183,403,526
Ensembl chr 2:183,378,718...183,403,489
G
Prpf31
pre-mRNA processing factor 31
involved_in acts_upstream_of_or_within
ISO IBA
(PMID:28781166) GO_REF:0000033 (PMID:11867543)
RGD GO_Central
PMID:11867543 PMID:28781166
GO_REF:0000033
NCBI chr 1:65,575,887...65,587,561
Ensembl chr 1:65,575,887...65,587,873
G
Prpf38a
pre-mRNA processing factor 38A
involved_in
ISO
(PMID:26673105), (PMID:28781166)
RGD
PMID:26673105 PMID:28781166
NCBI chr 5:123,312,461...123,324,160
Ensembl chr 5:123,311,482...123,323,972
G
Prpf38b
pre-mRNA processing factor 38B
involved_in
IEA
GO_REF:0000104
UniProt
GO_REF:0000104
NCBI chr 2:196,553,224...196,562,271
Ensembl chr 2:196,553,225...196,562,250
G
Prpf4
pre-mRNA splicing tri-snRNP complex factor 4
involved_in
ISO IBA
(PMID:28781166) GO_REF:0000033
RGD GO_Central
PMID:28781166
GO_REF:0000033
NCBI chr 5:75,859,934...75,873,924
Ensembl chr 5:75,859,924...75,873,919
G
Prpf40a
pre-mRNA processing factor 40 homolog A
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:37,625,585...37,689,859
Ensembl chr 3:37,627,690...37,690,886
G
Prpf40b
pre-mRNA processing factor 40 homolog B
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:130,392,611...130,454,053
Ensembl chr 7:130,432,112...130,454,052
G
Prpf6
pre-mRNA processing factor 6
involved_in
ISS IBA IEA ISO
GO_REF:0000024 GO_REF:0000033 GO_REF:0000002 (PMID:21549338), (PMID:28781166)
UniProt GO_Central InterPro RGD
PMID:21549338 PMID:28781166
GO_REF:0000002 GO_REF:0000024 GO_REF:0000033
NCBI chr 3:168,706,952...168,771,191
Ensembl chr 3:168,704,299...168,774,991
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Prpf8
pre-mRNA processing factor 8
involved_in
ISO
(PMID:28781166), (PMID:29301961)
RGD
PMID:28781166 PMID:29301961
NCBI chr10:60,331,494...60,354,606
Ensembl chr10:60,331,494...60,354,606
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Rbm10
RNA binding motif protein 10
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr X:1,540,399...1,572,571
Ensembl chr X:1,540,398...1,572,575
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Rbm14
RNA binding motif protein 14
involved_in
IBA ISO
GO_REF:0000033 (PMID:31794640)
GO_Central RGD
PMID:31794640
GO_REF:0000033
NCBI chr 1:202,076,940...202,105,688
Ensembl chr 1:202,078,287...202,105,665
G
Rbm19
RNA binding motif protein 19
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr12:36,365,775...36,451,033
Ensembl chr12:36,365,772...36,450,993
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Rbm41
RNA binding motif protein 41
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr X:103,605,732...103,660,381
Ensembl chr X:103,608,585...103,660,381
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Rbm44
RNA binding motif protein 44
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 9:91,731,153...91,756,783
Ensembl chr 9:91,731,115...91,756,772
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Rbm4b
RNA binding motif protein 4B
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:202,047,934...202,058,025
Ensembl chr 1:202,047,927...202,058,020
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Rbm5
RNA binding motif protein 5
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:108,420,220...108,449,481
Ensembl chr 8:108,420,222...108,449,430
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Rbm6
RNA binding motif protein 6
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:108,452,687...108,552,783
Ensembl chr 8:108,452,687...108,552,771
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Rbm8a
RNA binding motif protein 8A
involved_in
ISS ISO
GO_REF:0000024 (PMID:29301961)
UniProt RGD
PMID:29301961
GO_REF:0000024
NCBI chr 2:184,165,189...184,167,959
Ensembl chr 2:184,165,193...184,167,959
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Rbmx2
RNA binding motif protein, X-linked 2
involved_in
ISS IBA IEA ISO
GO_REF:0000024 GO_REF:0000033 GO_REF:0000002 (PMID:29360106)
UniProt GO_Central InterPro RGD
PMID:29360106
GO_REF:0000002 GO_REF:0000024 GO_REF:0000033
NCBI chr X:127,888,514...127,896,239
Ensembl chr X:127,888,438...127,896,869
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Rnf113a1
ring finger protein 113A1
involved_in
ISO
(PMID:29360106)
RGD
PMID:29360106
NCBI chr X:116,427,941...116,429,164
Ensembl chr X:116,427,684...116,433,762
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Rnpc3
RNA-binding region (RNP1, RRM) containing 3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 2:201,432,769...201,457,015
Ensembl chr 2:201,432,684...201,456,747
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Rnps1
RNA binding protein with serine rich domain 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:13,445,516...13,455,858
Ensembl chr10:13,445,653...13,455,858
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Rsrc1
arginine and serine rich coiled-coil 1
involved_in
ISO ISS
(PMID:15798186) GO_REF:0000024
RGD UniProt
PMID:15798186
GO_REF:0000024
NCBI chr 2:151,226,821...151,632,771
Ensembl chr 2:151,231,156...151,632,765
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Sart1
spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP
involved_in
ISO IEA
(PMID:28781166) GO_REF:0000002
RGD InterPro
PMID:28781166
GO_REF:0000002
NCBI chr 1:202,690,472...202,699,136
Ensembl chr 1:202,690,459...202,699,136
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Sart3
spliceosome associated factor 3, U4/U6 recycling protein
involved_in
ISO IBA
(PMID:15314151) GO_REF:0000033
RGD GO_Central
PMID:15314151
GO_REF:0000033
NCBI chr12:42,859,026...42,887,041
Ensembl chr12:42,859,305...42,887,038
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Sf1
splicing factor 1
involved_in
IEA
GO_REF:0000104
UniProt
GO_REF:0000104
NCBI chr 1:203,670,016...203,683,432
Ensembl chr 1:203,670,018...203,684,330
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Sf3a1
splicing factor 3A subunit 1
involved_in
ISO
(PMID:10882114), (PMID:29360106), (PMID:32494006), (PMID:36797247)
RGD
PMID:10882114 PMID:29360106 PMID:32494006 PMID:36797247
NCBI chr14:79,031,394...79,052,144
Ensembl chr14:79,031,394...79,052,144
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Sf3a2
splicing factor 3A subunit 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:29360106), (PMID:32494006), (PMID:34822310), (PMID:36797247)
UniProt RGD
PMID:29360106 PMID:32494006 PMID:34822310 PMID:36797247
GO_REF:0000024
NCBI chr 7:8,909,507...8,916,104
Ensembl chr 7:8,909,507...8,915,530
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Sf3a3
splicing factor 3a, subunit 3
involved_in
ISO IBA
(PMID:29360106), (PMID:32494006), (PMID:34822310), (PMID:36797247) GO_REF:0000033
RGD GO_Central
PMID:29360106 PMID:32494006 PMID:34822310 PMID:36797247
GO_REF:0000033
NCBI chr 5:136,967,713...136,987,345
Ensembl chr 5:136,967,691...136,987,361
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Sf3b1
splicing factor 3b, subunit 1
acts_upstream_of_or_within involved_in
ISO
(PMID:11252167) (PMID:23211737) (PMID:27720643), (PMID:28781166), (PMID:29360106), (PMID:32494006), (PMID:34822310), (PMID:36797247)
RGD
PMID:11252167 PMID:23211737 PMID:27720643 PMID:28781166 PMID:29360106 PMID:32494006 PMID:34822310 PMID:36797247 More...
NCBI chr 9:56,492,403...56,532,300
Ensembl chr 9:56,492,403...56,532,300
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Sf3b2
splicing factor 3b, subunit 2
involved_in
ISO IBA
(PMID:27720643), (PMID:29360106), (PMID:32494006), (PMID:34822310), (PMID:36797247) GO_REF:0000033
RGD GO_Central
PMID:27720643 PMID:29360106 PMID:32494006 PMID:34822310 PMID:36797247
GO_REF:0000033
NCBI chr 1:202,570,423...202,590,774
Ensembl chr 1:202,570,423...202,590,759
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Sf3b3
splicing factor 3b, subunit 3
involved_in
ISO IBA
(PMID:27720643), (PMID:28781166), (PMID:29360106), (PMID:32494006), (PMID:34822310), (PMID:36797247) GO_REF:0000033
RGD GO_Central
PMID:27720643 PMID:28781166 PMID:29360106 PMID:32494006 PMID:34822310 PMID:36797247 More...
GO_REF:0000033
NCBI chr19:38,782,749...38,820,271
Ensembl chr19:38,783,040...38,820,245
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Sf3b4
splicing factor 3B subunit 4
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:27720643), (PMID:29360106), (PMID:32494006), (PMID:36797247) GO_REF:0000024
Ensembl RGD UniProt
PMID:27720643 PMID:29360106 PMID:32494006 PMID:36797247
GO_REF:0000024 GO_REF:0000107
NCBI chr 2:183,732,791...183,737,545
Ensembl chr 2:183,732,754...183,737,959
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Sf3b5
splicing factor 3b, subunit 5
involved_in
ISO IBA
(PMID:27720643), (PMID:28781166), (PMID:29360106), (PMID:32494006), (PMID:34822310), (PMID:36797247) GO_REF:0000033
RGD GO_Central
PMID:27720643 PMID:28781166 PMID:29360106 PMID:32494006 PMID:34822310 PMID:36797247 More...
GO_REF:0000033
NCBI chr 1:7,357,040...7,357,752
Ensembl chr 1:7,350,731...7,357,839
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Sf3b6
splicing factor 3B, subunit 6
involved_in acts_upstream_of_or_within
ISO IBA
(PMID:27720643), (PMID:32494006), (PMID:34822310) (PMID:23211737) GO_REF:0000033
RGD GO_Central
PMID:23211737 PMID:27720643 PMID:32494006 PMID:34822310
GO_REF:0000033
NCBI chr 6:27,826,044...27,835,086
Ensembl chr 6:27,826,029...27,835,156
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Slu7
SLU7 homolog, splicing factor
involved_in
IEA
GO_REF:0000104
UniProt
GO_REF:0000104
NCBI chr10:27,908,325...27,923,784
Ensembl chr10:27,908,396...27,923,349
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Smu1
SMU1, DNA replication regulator and spliceosomal factor
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000002 GO_REF:0000107 (PMID:28781166)
UniProt InterPro Ensembl RGD
PMID:28781166
GO_REF:0000002 GO_REF:0000024 GO_REF:0000107
NCBI chr 5:55,856,691...55,875,262
Ensembl chr 5:55,856,246...55,875,300
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Snip1
Smad nuclear interacting protein 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:29360106)
UniProt RGD
PMID:29360106
GO_REF:0000024
NCBI chr 5:137,328,371...137,335,846
Ensembl chr 5:137,328,371...137,335,845
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Snrnp200
small nuclear ribonucleoprotein U5 subunit 200
involved_in
ISS ISO
GO_REF:0000024 (PMID:29301961), (PMID:8670905)
UniProt RGD
PMID:8670905 PMID:29301961
GO_REF:0000024
NCBI chr 3:114,428,854...114,458,194
Ensembl chr 3:114,428,854...114,458,182
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Snrnp25
small nuclear ribonucleoprotein U11/U12 subunit 25
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr10:15,420,482...15,423,806
Ensembl chr10:15,420,486...15,423,804
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Snrnp35
small nuclear ribonucleoprotein U11/U12 subunit 35
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr12:32,112,032...32,119,829
Ensembl chr12:32,110,993...32,122,660
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Snrnp70
small nuclear ribonucleoprotein U1 subunit 70
involved_in
ISO IBA ISS
(PMID:9531537) GO_REF:0000033 GO_REF:0000024
RGD GO_Central UniProt
PMID:9531537
GO_REF:0000024 GO_REF:0000033
NCBI chr 1:95,856,038...95,876,434
Ensembl chr 1:95,856,036...95,876,392
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Snrpa
small nuclear ribonucleoprotein polypeptide A
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:82,481,770...82,490,540
Ensembl chr 1:82,481,770...82,490,538
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Snrpa1
small nuclear ribonucleoprotein polypeptide A'
involved_in
ISO IBA
(PMID:28076346), (PMID:28781166), (PMID:32494006), (PMID:36797247) GO_REF:0000033
RGD GO_Central
PMID:28076346 PMID:28781166 PMID:32494006 PMID:36797247
GO_REF:0000033
NCBI chr 1:119,641,402...119,654,653
Ensembl chr 1:119,638,481...119,654,653
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Snrpb
small nuclear ribonucleoprotein polypeptides B and B1
involved_in
ISS IBA ISO
GO_REF:0000024 GO_REF:0000033 (PMID:28076346), (PMID:28781166), (PMID:32494006), (PMID:36797247)
UniProt GO_Central RGD
PMID:28076346 PMID:28781166 PMID:32494006 PMID:36797247
GO_REF:0000024 GO_REF:0000033
NCBI chr 3:117,369,816...117,379,344
Ensembl chr 3:117,370,100...117,379,339
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Snrpb2
small nuclear ribonucleoprotein polypeptide B2
involved_in
ISO IBA
(PMID:28076346), (PMID:28781166), (PMID:32494006), (PMID:36797247) GO_REF:0000033
RGD GO_Central
PMID:28076346 PMID:28781166 PMID:32494006 PMID:36797247
GO_REF:0000033
NCBI chr 3:130,399,239...130,408,821
Ensembl chr 3:130,399,248...130,408,812
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Snrpc
small nuclear ribonucleoprotein polypeptide C
involved_in
ISO
(PMID:8972845)
RGD
PMID:8972845
NCBI chr20:5,888,453...5,906,638
Ensembl chr20:5,888,453...5,906,638
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Snrpd1
small nuclear ribonucleoprotein D1 polypeptide
involved_in
ISO
(PMID:28076346), (PMID:32494006), (PMID:36797247)
RGD
PMID:28076346 PMID:32494006 PMID:36797247
NCBI chr18:1,696,838...1,707,400
Ensembl chr18:1,696,852...1,708,256
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Snrpd2
small nuclear ribonucleoprotein D2 polypeptide
involved_in
ISO
(PMID:28076346), (PMID:32494006), (PMID:36797247)
RGD
PMID:28076346 PMID:32494006 PMID:36797247
NCBI chr 1:78,798,377...78,801,227
Ensembl chr 1:78,798,377...78,803,351
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Snrpd3
small nuclear ribonucleoprotein D3 polypeptide
involved_in
ISO
(PMID:28076346), (PMID:32494006), (PMID:36797247)
RGD
PMID:28076346 PMID:32494006 PMID:36797247
NCBI chr20:13,130,112...13,145,947
Ensembl chr20:13,130,119...13,145,978
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Snrpe
small nuclear ribonucleoprotein polypeptide E
involved_in
ISO
(PMID:28076346), (PMID:32494006), (PMID:36797247)
RGD
PMID:28076346 PMID:32494006 PMID:36797247
NCBI chr13:45,050,986...45,057,231
Ensembl chr13:45,050,986...45,057,310 Ensembl chr 8:45,050,986...45,057,310
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Snrpf
small nuclear ribonucleoprotein polypeptide F
involved_in
ISO IBA
(PMID:28076346), (PMID:32494006), (PMID:36797247) GO_REF:0000033
RGD GO_Central
PMID:28076346 PMID:32494006 PMID:36797247
GO_REF:0000033
NCBI chr 7:28,130,427...28,137,129
Ensembl chr 7:28,130,427...28,137,129
G
Snrpg
small nuclear ribonucleoprotein polypeptide G
involved_in
ISO IBA
(PMID:28076346), (PMID:32494006), (PMID:36797247) GO_REF:0000033
RGD GO_Central
PMID:28076346 PMID:32494006 PMID:36797247
GO_REF:0000033
NCBI chr 4:118,812,278...118,819,827
Ensembl chr 4:118,812,252...118,819,826
G
Snrpgl1
small nuclear ribonucleoprotein polypeptide G like 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:87,982,629...87,983,056
Ensembl chr 1:87,982,626...87,983,118 Ensembl chr 4:87,982,626...87,983,118
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Snrpn
small nuclear ribonucleoprotein polypeptide N
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:111,101,327...111,123,400
Ensembl chr 1:111,101,329...111,123,634
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Snu13
small nuclear ribonucleoprotein 13
involved_in
ISO IBA ISS
(PMID:28781166) GO_REF:0000033 GO_REF:0000024
RGD GO_Central UniProt
PMID:28781166
GO_REF:0000024 GO_REF:0000033
NCBI chr 7:113,565,293...113,570,887
Ensembl chr 7:113,565,295...113,570,872 Ensembl chr 1:113,565,295...113,570,872
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Snu13l1
small nuclear ribonucleoprotein 13 like 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr X:150,624,087...150,624,525
Ensembl chr X:150,624,087...150,624,473
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Snw1
SNW domain containing 1
involved_in
ISO
(PMID:15194481), (PMID:28076346)
RGD
PMID:15194481 PMID:28076346
NCBI chr 6:107,095,450...107,119,536
Ensembl chr 6:107,095,457...107,119,536
G
Srrm2
serine/arginine repetitive matrix 2
involved_in
ISO
(PMID:28076346)
RGD
PMID:28076346
NCBI chr10:12,815,471...12,848,750
Ensembl chr10:12,815,471...12,848,751
G
Srsf10
serine and arginine rich splicing factor 10
involved_in
ISO IBA
(PMID:9774382) GO_REF:0000033
RGD GO_Central
PMID:9774382
GO_REF:0000033
NCBI chr 5:148,088,759...148,102,964
Ensembl chr 5:148,088,823...148,101,768
G
Srsf12
serine and arginine rich splicing factor 12
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:47,606,526...47,631,509
Ensembl chr 5:47,606,285...47,629,778
G
Srsf2
serine and arginine rich splicing factor 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:102,052,158...102,055,365
Ensembl chr10:102,052,314...102,055,338
G
Srsf3
serine and arginine rich splicing factor 3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:7,091,928...7,101,860
Ensembl chr20:7,091,910...7,101,078
G
Srsf5
serine and arginine rich splicing factor 5
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 6:100,605,165...100,610,192
Ensembl chr 6:100,605,456...100,610,177
G
Srsf7
serine and arginine rich splicing factor 7
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 6:14,811,775...14,818,968
Ensembl chr 6:14,811,808...14,818,965
G
Srsf8
serine and arginine rich splicing factor 8
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr X:45,695,314...45,741,153
Ensembl chr X:45,695,313...45,741,134
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Syf2
SYF2 pre-mRNA-splicing factor
involved_in
ISO ISS
(PMID:28076346) GO_REF:0000024
RGD UniProt
PMID:28076346
GO_REF:0000024
NCBI chr 5:147,156,492...147,164,416
Ensembl chr 5:147,156,480...147,164,414
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Tra2a
transformer 2 alpha
involved_in
ISO
(PMID:9546399)
RGD
PMID:9546399
NCBI chr 4:78,220,838...78,239,737
Ensembl chr 4:78,220,883...78,239,712
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Tra2b
transformer 2 beta
involved_in acts_upstream_of
ISO IEA ISS
(PMID:9546399) MGI:2176173|MGI:4450919 (PMID:22194695) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:9546399 PMID:22194695
GO_REF:0000024 GO_REF:0000107
NCBI chr11:78,788,880...78,807,252
Ensembl chr11:78,788,884...78,807,249
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Txnl4a
thioredoxin-like 4A
involved_in
ISO
(PMID:28781166)
RGD
PMID:28781166
NCBI chr18:73,659,107...73,674,893
Ensembl chr18:73,659,107...73,674,893
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Txnl4b
thioredoxin-like 4B
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr19:37,530,157...37,539,827
Ensembl chr19:37,530,152...37,538,521
G
U2af1
U2 small nuclear RNA auxiliary factor 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:9,742,904...9,753,840
Ensembl chr20:9,742,905...9,753,832
G
U2af1l4
U2 small nuclear RNA auxiliary factor 1-like 4
involved_in
IEA IBA
GO_REF:0000002 GO_REF:0000033
InterPro GO_Central
GO_REF:0000002 GO_REF:0000033
NCBI chr 1:85,816,268...85,818,462
Ensembl chr 1:85,815,101...85,818,462
G
U2af2
U2 small nuclear RNA auxiliary factor 2
involved_in
ISO
(PMID:1824937)
RGD
PMID:1824937
NCBI chr 1:68,760,911...68,779,730
Ensembl chr 1:68,760,924...68,778,492
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Ubl5
ubiquitin-like 5
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:19,181,504...19,185,224
Ensembl chr 8:19,181,615...19,185,217
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Usp39
ubiquitin specific peptidase 39
involved_in
ISO
(PMID:11350945)
RGD
PMID:11350945
NCBI chr 4:104,373,948...104,406,359
Ensembl chr 4:104,373,955...104,406,359
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Usp49
ubiquitin specific peptidase 49
involved_in
ISO
(PMID:23824326)
RGD
PMID:23824326
NCBI chr 9:13,305,640...13,366,132
Ensembl chr 9:13,308,178...13,366,132
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Wbp4
WW domain binding protein 4
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000002 (PMID:28781166)
UniProt InterPro RGD
PMID:28781166
GO_REF:0000002 GO_REF:0000024
NCBI chr15:54,862,700...54,890,668
Ensembl chr15:54,862,843...54,890,647
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Wdr83
WD repeat domain 83
involved_in
ISO IBA IEA
(PMID:11991638) GO_REF:0000033 GO_REF:0000107
RGD GO_Central Ensembl
PMID:11991638
GO_REF:0000033 GO_REF:0000107
NCBI chr19:23,076,948...23,082,569
Ensembl chr19:23,077,010...23,082,563
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Xab2
XPA binding protein 2
involved_in
ISO IBA IEA ISS
(PMID:28076346) GO_REF:0000033 GO_REF:0000002 GO_REF:0000107 GO_REF:0000024
RGD GO_Central InterPro Ensembl UniProt
PMID:28076346
GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr12:1,667,672...1,679,702
Ensembl chr12:1,667,672...1,679,692
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Yju2b
YJU2 splicing factor homolog B
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr19:23,894,587...23,906,084
Ensembl chr19:23,894,649...23,906,077
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Ythdc1
YTH N6-methyladenosine RNA binding protein C1
involved_in
IDA IBA
GO_REF:0000033
GO_Central RGD
PMID:10564280
GO_REF:0000033, RGD:634512
NCBI chr14:21,185,438...21,215,934
Ensembl chr14:21,185,440...21,216,028
G
Zcrb1
zinc finger CCHC-type and RNA binding motif containing 1
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 7:124,525,227...124,538,564
Ensembl chr 7:124,524,870...124,571,261
G
Zmat2
zinc finger, matrin type 2
involved_in
ISO IBA
(PMID:28781166) GO_REF:0000033
RGD GO_Central
PMID:28781166
GO_REF:0000033
NCBI chr18:28,409,606...28,414,241
Ensembl chr18:28,398,795...28,414,747
G
Zrsr2
zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2
involved_in
ISO IBA IGI
(PMID:9237760) GO_REF:0000033
RGD GO_Central
PMID:9237760 PMID:33691379
GO_REF:0000033, RGD:151232289
NCBI chr X:30,547,424...30,571,613
Ensembl chr X:30,547,536...30,570,125
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Zrsr2-ps1
zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2, pseudogene 1
involved_in
ISO IBA
(MGI:6192413|PMID:29617656) GO_REF:0000033
RGD GO_Central
PMID:29617656
GO_REF:0000033 MGI:6192413
NCBI chr14:96,972,651...96,978,364
Ensembl chr14:96,972,580...96,978,891
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Acin1
apoptotic chromatin condensation inducer 1
involved_in
ISO
(PMID:12665594)
RGD
PMID:12665594
NCBI chr15:28,102,112...28,147,001
Ensembl chr15:28,102,112...28,147,001
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Akr1c1
aldo-keto reductase family 1, member C1
acts_upstream_of_or_within
ISO
(PMID:23636947)
RGD
PMID:23636947
NCBI chr17:65,810,474...65,837,385
Ensembl chr17:65,810,475...65,837,326
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C1qbp
complement C1q binding protein
involved_in
ISO ISS IEA IBA
(PMID:10022843) GO_REF:0000024 GO_REF:0000107 GO_REF:0000033
RGD UniProt Ensembl GO_Central
PMID:10022843
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr10:55,699,954...55,704,605
Ensembl chr10:55,699,954...55,704,649
G
Celf4
CUGBP, Elav-like family member 4
acts_upstream_of_or_within
ISO
(PMID:23636947)
RGD
PMID:23636947
NCBI chr18:16,786,578...17,065,045
Ensembl chr18:16,786,867...17,064,786
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Dyrk1a
dual specificity tyrosine phosphorylation regulated kinase 1A
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:21470964)
Ensembl RGD
PMID:21470964
GO_REF:0000107
NCBI chr11:33,890,706...34,009,420
Ensembl chr11:33,890,490...34,009,420
G
Hnrnpa2b1
heterogeneous nuclear ribonucleoprotein A2/B1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:18480465)
Ensembl RGD
PMID:18480465
GO_REF:0000107
NCBI chr 4:80,534,659...80,545,297
Ensembl chr 4:80,534,651...80,545,249
G
Hnrnpk
heterogeneous nuclear ribonucleoprotein K
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:23636947)
Ensembl RGD
PMID:23636947
GO_REF:0000107
NCBI chr17:6,262,936...6,275,001
Ensembl chr17:6,262,998...6,274,997
G
Hnrnpl
heterogeneous nuclear ribonucleoprotein L
IMP
RGD
PMID:22570490
RGD:9999428
NCBI chr 1:84,098,558...84,111,568
Ensembl chr 1:84,100,879...84,111,553
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LOC100359916
heterogeneous nuclear ribonucleoprotein K-like
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr 5:58,668,326...58,670,222
Ensembl chr 5:58,668,327...58,670,220
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Npm1
nucleophosmin 1
acts_upstream_of_or_within
ISO
(PMID:16376875)
RGD
PMID:16376875
NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645
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Pcbp4
poly(rC) binding protein 4
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:23636947)
GO_Central RGD
PMID:23636947
GO_REF:0000033
NCBI chr 8:107,092,688...107,103,276
Ensembl chr 8:107,093,013...107,103,276
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Ptbp1
polypyrimidine tract binding protein 1
involved_in acts_upstream_of_or_within
ISO ISS
(PMID:15009664) (PMID:23636947) (MGI:6271441|PMID:17679093) GO_REF:0000024
RGD UniProt
PMID:15009664 PMID:17679093 PMID:23636947
GO_REF:0000024 MGI:6271441
NCBI chr 7:9,842,574...9,852,332
Ensembl chr 7:9,842,574...9,852,397
G
Ptbp3
polypyrimidine tract binding protein 3
acts_upstream_of_or_within
ISO
(PMID:23636947)
RGD
PMID:23636947
NCBI chr 5:74,313,367...74,399,439
Ensembl chr 5:74,315,101...74,399,791
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Rbm10
RNA binding motif protein 10
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:23636947)
Ensembl RGD
PMID:23636947
GO_REF:0000107
NCBI chr X:1,540,399...1,572,571
Ensembl chr X:1,540,398...1,572,575
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Rbm20
RNA binding motif protein 20
involved_in
IMP ISO IDA
PMID:35394688 (PMID:24960161), (PMID:34732726) (MGI:5817050|PMID:27630136), (MGI:6162809|PMID:29895960), (MGI:6472247|PMID:33110103) PMID:25573899 PMID:23307558
RGD
PMID:24960161 PMID:27630136 PMID:29895960 PMID:33110103 PMID:34732726 PMID:35394688 PMID:25573899 PMID:23307558 PMID:24960161 More...
MGI:5817050 MGI:6162809 MGI:6472247 , RGD:152025505 , RGD:152025519 , RGD:152025504 , RGD:152025509
NCBI chr 1:252,683,760...252,907,465
Ensembl chr 1:252,683,771...252,886,060
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Rbm42
RNA binding motif protein 42
acts_upstream_of_or_within
ISO
(PMID:23636947)
RGD
PMID:23636947
NCBI chr 1:85,898,618...85,908,569
Ensembl chr 1:85,898,625...85,908,573
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Rbmxl1
Rbmx like 1
involved_in
IDA
PMID:15009664
UniProt
PMID:15009664
RGD:8554197
NCBI chr19:29,407,902...29,411,519
Ensembl chr19:29,407,912...29,412,859
G
Rnps1
RNA binding protein with serine rich domain 1
involved_in
ISO ISS
(PMID:12665594) GO_REF:0000024
RGD UniProt
PMID:12665594
GO_REF:0000024
NCBI chr10:13,445,516...13,455,858
Ensembl chr10:13,445,653...13,455,858
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Sap18
Sin3A associated protein 18
involved_in
ISO
(PMID:12665594)
RGD
PMID:12665594
NCBI chr15:31,943,228...31,947,534
Ensembl chr15:31,943,230...31,950,038 Ensembl chr10:31,943,230...31,950,038
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Sfswap
splicing factor SWAP
involved_in
IDA
PMID:15009664
UniProt
PMID:15009664
RGD:8554197
NCBI chr12:27,109,607...27,179,941
Ensembl chr12:27,109,611...27,179,884
G
Srsf10
serine and arginine rich splicing factor 10
involved_in
ISO
(PMID:11684676) (MGI:3688015|PMID:11684676)
RGD
PMID:11684676
MGI:3688015
NCBI chr 5:148,088,759...148,102,964
Ensembl chr 5:148,088,823...148,101,768
G
Srsf4
serine and arginine rich splicing factor 4
involved_in
ISO
(PMID:15009664)
RGD
PMID:15009664
NCBI chr 5:144,060,981...144,090,798
Ensembl chr 5:144,061,463...144,089,229
G
Srsf6
serine and arginine rich splicing factor 6
involved_in
ISO
(PMID:15009664)
RGD
PMID:15009664
NCBI chr 3:151,589,546...151,594,869
Ensembl chr 3:151,589,535...151,594,860
G
Srsf7
serine and arginine rich splicing factor 7
involved_in
ISO
(PMID:15009664)
RGD
PMID:15009664
NCBI chr 6:14,811,775...14,818,968
Ensembl chr 6:14,811,808...14,818,965
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Srsf9
serine and arginine rich splicing factor 9
involved_in
ISO ISS
(PMID:15009664) GO_REF:0000024
RGD UniProt
PMID:15009664
GO_REF:0000024
NCBI chr12:41,278,225...41,284,502
Ensembl chr12:41,275,687...41,284,499
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U2af2
U2 small nuclear RNA auxiliary factor 2
involved_in
ISO
(PMID:15009664)
RGD
PMID:15009664
NCBI chr 1:68,760,911...68,779,730
Ensembl chr 1:68,760,924...68,778,492
G
Eif1
eukaryotic translation initiation factor 1
acts_upstream_of_or_within
ISO
(PMID:16789828)
RGD
PMID:16789828
NCBI chr10:85,246,751...85,248,842
Ensembl chr10:85,246,764...85,427,327
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Exosc10
exosome component 10
acts_upstream_of_or_within
ISO
(PMID:16789828)
RGD
PMID:16789828
NCBI chr 5:158,995,313...159,018,940
Ensembl chr 5:158,995,313...159,018,940
G
Upf1
UPF1, RNA helicase and ATPase
acts_upstream_of_or_within
ISO
(PMID:16789828)
RGD
PMID:16789828
NCBI chr16:19,076,594...19,097,365
Ensembl chr16:19,076,322...19,096,568
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Upf3a
UPF3A, regulator of nonsense mediated mRNA decay
acts_upstream_of_or_within
ISO
(PMID:16789828)
RGD
PMID:16789828
NCBI chr16:75,757,442...75,768,478
Ensembl chr16:75,757,441...75,769,345
G
Upf3b
UPF3B, regulator of nonsense mediated mRNA decay
acts_upstream_of_or_within
ISO
(PMID:16789828)
RGD
PMID:16789828
NCBI chr X:116,335,308...116,353,332
Ensembl chr X:116,335,308...116,353,236
G
Celf3
CUGBP, Elav-like family member 3
involved_in
ISO
(PMID:15009664)
RGD
PMID:15009664
NCBI chr 2:182,116,034...182,130,163
Ensembl chr 2:182,116,073...182,130,163
G
Celf4
CUGBP, Elav-like family member 4
involved_in
ISO
(PMID:15009664)
RGD
PMID:15009664
NCBI chr18:16,786,578...17,065,045
Ensembl chr18:16,786,867...17,064,786
G
Cirbp
cold inducible RNA binding protein
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:9,533,857...9,538,899
Ensembl chr 7:9,424,178...9,538,818
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Dazap1
DAZ associated protein 1
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:23636947)
GO_Central RGD
PMID:23636947
GO_REF:0000033
NCBI chr 7:9,423,673...9,448,116
Ensembl chr 7:9,424,178...9,538,818
G
Eif4a3
eukaryotic translation initiation factor 4A3
acts_upstream_of_or_within
ISO
(PMID:18480465)
RGD
PMID:18480465
NCBI chr10:104,549,038...104,559,032
Ensembl chr10:104,549,038...104,559,057
G
Haus8l2
HAUS augmin-like complex, subunit 8 like 2
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr11:5,628,432...5,630,535
Ensembl chr11:5,628,427...5,630,533
G
Hmx2
H6 family homeobox 2
acts_upstream_of_or_within
ISO
(PMID:23636947)
RGD
PMID:23636947
NCBI chr 1:186,319,110...186,326,771
Ensembl chr 1:186,319,110...186,326,771
G
Hspa8
heat shock protein family A (Hsp70) member 8
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:23636947)
Ensembl RGD
PMID:23636947
GO_REF:0000107
NCBI chr 8:41,183,397...41,187,260
Ensembl chr 8:41,183,264...41,187,259
G
Lmntd2
lamin tail domain containing 2
acts_upstream_of_or_within
ISO
(PMID:23636947)
RGD
PMID:23636947
NCBI chr 1:196,315,112...196,320,880
Ensembl chr 1:196,315,115...196,319,156
G
Ncbp1
nuclear cap binding protein subunit 1
involved_in
ISO
(PMID:23793891)
RGD
PMID:23793891
NCBI chr 5:60,416,023...60,449,004
Ensembl chr 5:60,415,982...60,449,089
G
Ncl
nucleolin
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 9:86,999,588...87,008,112
Ensembl chr 9:86,998,019...87,008,136
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Nup98
nucleoporin 98 and 96 precursor
involved_in
ISO ISS
(PMID:28221134) GO_REF:0000024
RGD UniProt
PMID:28221134
GO_REF:0000024
NCBI chr 1:156,494,423...156,591,415
Ensembl chr 1:156,494,423...156,591,415
G
Obi1
ORC ubiquitin ligase 1
acts_upstream_of_or_within
ISO
(PMID:23636947)
RGD
PMID:23636947
NCBI chr15:81,269,413...81,308,734
Ensembl chr15:81,269,416...81,308,734
G
Prdx6
peroxiredoxin 6
involved_in
ISO
UniProtKB:Q8IWL8 (PMID:16186110)
RGD
PMID:16186110
NCBI chr13:73,528,746...73,539,295
Ensembl chr13:73,528,210...73,539,355
G
Prpf19
pre-mRNA processing factor 19
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:18480465)
Ensembl RGD
PMID:18480465
GO_REF:0000107
NCBI chr 1:207,541,582...207,552,664
Ensembl chr 1:207,541,595...207,552,662
G
Rbm3
RNA binding motif protein 3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr X:14,348,909...14,352,387
Ensembl chr X:14,348,910...14,353,580
G
Rbmx
RNA binding motif protein, X-linked
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr X:135,305,237...135,314,806
Ensembl chr X:135,305,325...135,314,743
G
Rbmxl1
Rbmx like 1
involved_in
IDA IBA
PMID:19282290 GO_REF:0000033
GO_Central
PMID:19282290
GO_REF:0000033, RGD:2316827
NCBI chr19:29,407,902...29,411,519
Ensembl chr19:29,407,912...29,412,859
G
Rbmxl1b
Rbmx like 1B
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:43,956,275...43,957,957
Ensembl chr 4:43,956,281...43,957,944
G
Rbmy1j
RNA binding motif protein, Y-linked, family 1, member J
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr Y:415,160...425,460
Ensembl chr Y:415,178...425,426
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Sf3b4
splicing factor 3B subunit 4
involved_in acts_upstream_of_or_within
IEA ISO IBA
GO_REF:0000107 (PMID:23636947) GO_REF:0000033
Ensembl RGD GO_Central
PMID:23636947
GO_REF:0000033 GO_REF:0000107
NCBI chr 2:183,732,791...183,737,545
Ensembl chr 2:183,732,754...183,737,959
G
Slc39a5
solute carrier family 39 member 5
acts_upstream_of_or_within
ISO
(PMID:23636947)
RGD
PMID:23636947
NCBI chr 7:822,873...830,865
Ensembl chr 7:824,818...830,242
G
Slirp
SRA stem-loop interacting RNA binding protein
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 6:107,088,760...107,097,791
Ensembl chr 6:107,088,403...107,097,791
G
Snrnp70
small nuclear ribonucleoprotein U1 subunit 70
acts_upstream_of_or_within
ISO
(PMID:23636947)
RGD
PMID:23636947
NCBI chr 1:95,856,038...95,876,434
Ensembl chr 1:95,856,036...95,876,392
G
Snw1
SNW domain containing 1
involved_in
ISO
(PMID:12840015)
RGD
PMID:12840015
NCBI chr 6:107,095,450...107,119,536
Ensembl chr 6:107,095,457...107,119,536
G
Thrap3
thyroid hormone receptor associated protein 3
involved_in
ISS ISO
GO_REF:0000024 (PMID:20123736)
UniProt RGD
PMID:20123736
GO_REF:0000024
NCBI chr 5:138,445,284...138,487,544
Ensembl chr 5:138,445,295...138,487,477
G
Tra2a
transformer 2 alpha
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:22194695)
GO_Central RGD
PMID:22194695
GO_REF:0000033
NCBI chr 4:78,220,838...78,239,737
Ensembl chr 4:78,220,883...78,239,712
G
Tra2b
transformer 2 beta
involved_in acts_upstream_of_or_within
ISS ISO IEA IBA
GO_REF:0000024 (PMID:15009664) GO_REF:0000107 GO_REF:0000033 MGI:2176173|MGI:4450919 (PMID:22194695)
UniProt RGD Ensembl GO_Central
PMID:15009664 PMID:22194695
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr11:78,788,880...78,807,252
Ensembl chr11:78,788,884...78,807,249
G
Zfp64
zinc finger protein 64
acts_upstream_of_or_within
ISO
(PMID:23636947)
RGD
PMID:23636947
NCBI chr 3:157,666,819...157,695,774
Ensembl chr 3:157,633,211...157,695,809
G
Arb2a
ARB2 cotranscriptional regulator A
involved_in
ISO
(MGI:6113784|PMID:29311329)
RGD
PMID:29311329
MGI:6113784
NCBI chr 2:7,553,873...8,018,183
Ensembl chr 2:7,553,891...8,018,162
G
Celf1
CUGBP, Elav-like family member 1
involved_in acts_upstream_of_or_within
IEA ISO IBA
GO_REF:0000107 (PMID:32109384) GO_REF:0000033
Ensembl RGD GO_Central
PMID:32109384
GO_REF:0000033 GO_REF:0000107
NCBI chr 3:76,924,591...76,999,429
Ensembl chr 3:76,924,613...76,999,426
G
Celf2
CUGBP, Elav-like family member 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr17:70,904,462...71,729,072
Ensembl chr17:71,210,853...71,728,333
G
Celf3
CUGBP, Elav-like family member 3
involved_in
ISO IBA
(PMID:11158314) GO_REF:0000033
RGD GO_Central
PMID:11158314
GO_REF:0000033
NCBI chr 2:182,116,034...182,130,163
Ensembl chr 2:182,116,073...182,130,163
G
Celf4
CUGBP, Elav-like family member 4
involved_in acts_upstream_of_or_within
ISO
(PMID:11158314) (PMID:19720736)
RGD
PMID:11158314 PMID:19720736
NCBI chr18:16,786,578...17,065,045
Ensembl chr18:16,786,867...17,064,786
G
Celf5
CUGBP, Elav-like family member 5
involved_in
ISO IBA
(PMID:11158314) GO_REF:0000033
RGD GO_Central
PMID:11158314
GO_REF:0000033
NCBI chr 7:8,225,787...8,250,322
Ensembl chr 7:8,225,825...8,250,322
G
Celf6
CUGBP, Elav-like family member 6
involved_in
ISO IBA
(PMID:14761971) GO_REF:0000033
RGD GO_Central
PMID:14761971
GO_REF:0000033
NCBI chr 8:59,975,095...60,006,060
Ensembl chr 8:59,975,088...60,005,041
G
Ddx17
DEAD-box helicase 17
involved_in
ISO
(PMID:23022728) (MGI:5819339|PMID:23022728)
RGD
PMID:23022728
MGI:5819339
NCBI chr 7:111,091,127...111,109,353
Ensembl chr 7:111,089,445...111,109,193
G
Ddx5
DEAD-box helicase 5
involved_in
ISO
(PMID:21343338), (PMID:23022728) (MGI:5819339|PMID:23022728)
RGD
PMID:21343338 PMID:23022728
MGI:5819339
NCBI chr10:91,723,508...91,732,210
Ensembl chr10:91,723,508...91,732,283
G
Dyrk1a
dual specificity tyrosine phosphorylation regulated kinase 1A
involved_in
IDA
PMID:22767602
UniProt
PMID:22767602
RGD:8554210
NCBI chr11:33,890,706...34,009,420
Ensembl chr11:33,890,490...34,009,420
G
Eif4a3
eukaryotic translation initiation factor 4A3
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr10:104,549,038...104,559,032
Ensembl chr10:104,549,038...104,559,057
G
Fblim1
filamin binding LIM protein 1
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr 5:153,883,945...153,915,524
Ensembl chr 5:153,883,960...153,913,757
G
Fmr1
fragile X messenger ribonucleoprotein 1
involved_in
ISO ISS
(PMID:18653529) (MGI:5009520|PMID:18653529) GO_REF:0000024
RGD UniProt
PMID:18653529
GO_REF:0000024 MGI:5009520
NCBI chr X:147,240,239...147,278,057
Ensembl chr X:147,240,301...147,278,050
G
Hnrnpa1
heterogeneous nuclear ribonucleoprotein A1
involved_in
ISO
(PMID:25689357)
RGD
PMID:25689357
NCBI chr 7:134,375,318...134,381,610
Ensembl chr 7:134,375,150...134,381,609
G
Hnrnpl
heterogeneous nuclear ribonucleoprotein L
involved_in
ISO IEA ISS
(PMID:25623890) GO_REF:0000107 (MGI:5441689|PMID:22523384) GO_REF:0000024
RGD Ensembl UniProt
PMID:22523384 PMID:25623890
GO_REF:0000024 GO_REF:0000107 MGI:5441689
NCBI chr 1:84,098,558...84,111,568
Ensembl chr 1:84,100,879...84,111,553
G
Hnrnpu
heterogeneous nuclear ribonucleoprotein U
involved_in
IEA ISO
GO_REF:0000107 (PMID:22325991)
Ensembl RGD
PMID:22325991
GO_REF:0000107
NCBI chr13:90,069,058...90,086,905
Ensembl chr13:90,074,181...90,086,588
G
Khdrbs1
KH RNA binding domain containing, signal transduction associated 1
involved_in
ISS IBA IDA ISO
GO_REF:0000024 GO_REF:0000033 PMID:15345239 (PMID:24514149)
UniProt GO_Central RGD
PMID:24514149 PMID:15345239
GO_REF:0000024 GO_REF:0000033, RGD:1358238
NCBI chr 5:142,051,844...142,089,175
Ensembl chr 5:142,063,570...142,089,180
G
Khdrbs2
KH RNA binding domain containing, signal transduction associated 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 9:34,447,023...34,953,684
Ensembl chr 9:34,447,056...34,915,530
G
Khdrbs3
KH RNA binding domain containing, signal transduction associated 3
involved_in
IDA IBA
PMID:15345239 GO_REF:0000033
GO_Central
PMID:15345239
GO_REF:0000033, RGD:1358238
NCBI chr 7:100,837,707...100,995,644
Ensembl chr 7:100,837,934...100,988,460
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Magoh
mago homolog, exon junction complex subunit
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:22203037)
UniProt Ensembl RGD
PMID:22203037
GO_REF:0000024 GO_REF:0000107
NCBI chr 5:122,639,268...122,646,650
Ensembl chr 5:122,639,308...122,646,617
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Mbnl1
muscleblind-like splicing regulator 1
involved_in
IMP
PMID:31283468
UniProt
PMID:31283468
RGD:243049249
NCBI chr 2:144,639,819...144,814,395
Ensembl chr 2:144,670,285...144,814,368
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Mbnl2
muscleblind-like splicing regulator 2
involved_in acts_upstream_of_or_within
IMP ISO
PMID:31283468 (PMID:19720736)
RGD
PMID:19720736 PMID:31283468
RGD:243049249
NCBI chr15:97,385,278...97,542,924
Ensembl chr15:97,385,244...97,542,937
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Myod1
myogenic differentiation 1
involved_in acts_upstream_of_or_within
ISS ISO
PMID:9525963 (PMID:9525963)
RGD
PMID:9525963 PMID:9525963
RGD:8553451
NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554
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Nova1
NOVA alternative splicing regulator 1
involved_in
ISS IBA IEA ISO
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 (MGI:5789071|PMID:27223325), (MGI:6716952|PMID:17065982), (MGI:6718240|PMID:14615540)
UniProt GO_Central Ensembl RGD
PMID:14615540 PMID:17065982 PMID:27223325
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:5789071 MGI:6716952 MGI:6718240
NCBI chr 6:63,780,105...63,905,567
Ensembl chr 6:63,783,489...63,906,289
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Nova2
NOVA alternative splicing regulator 2
involved_in
ISO IBA
(PMID:32197073) GO_REF:0000033 (MGI:3587155|PMID:16041372), (MGI:5789071|PMID:27223325), (MGI:6716952|PMID:17065982), (MGI:6718240|PMID:14615540)
RGD GO_Central
PMID:14615540 PMID:16041372 PMID:17065982 PMID:27223325 PMID:32197073
GO_REF:0000033 MGI:3587155 MGI:5789071 MGI:6716952 MGI:6718240
NCBI chr 1:78,572,253...78,613,703
Ensembl chr 1:78,572,279...78,608,021
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Nsrp1
nuclear speckle splicing regulatory protein 1
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 GO_REF:0000002 (PMID:21296756)
UniProt Ensembl InterPro RGD
PMID:21296756
GO_REF:0000002 GO_REF:0000024 GO_REF:0000107
NCBI chr10:61,880,807...61,914,471
Ensembl chr10:61,880,825...61,914,471
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Ptbp1
polypyrimidine tract binding protein 1
involved_in
ISO ISS
(PMID:16260624), (PMID:21518792) GO_REF:0000024
RGD UniProt
PMID:16260624 PMID:21518792
GO_REF:0000024
NCBI chr 7:9,842,574...9,852,332
Ensembl chr 7:9,842,574...9,852,397
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Puf60
poly-U binding splicing factor 60
involved_in
IEA IBA
GO_REF:0000002 GO_REF:0000033
InterPro GO_Central
GO_REF:0000002 GO_REF:0000033
NCBI chr 7:107,782,799...107,793,759
Ensembl chr 7:107,782,770...107,794,531
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Rbfox1
RNA binding fox-1 homolog 1
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:23300487)
GO_Central RGD
PMID:23300487
GO_REF:0000033
NCBI chr10:8,152,198...10,248,120
Ensembl chr10:8,152,198...9,686,659
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Rbfox2
RNA binding fox-1 homolog 2
involved_in acts_upstream_of_or_within
ISO IBA IMP IEA
(MGI:3770484|PMID:17715393), (MGI:5284784|PMID:17101796) MGI:1926224|MGI:4838182 (PMID:22357600) GO_REF:0000033 PMID:37548402 Cacna1c Fxr1, Mef2a, Mtmr3 Atp2b1, Mef2a Mcl1 GO_REF:0000107 GO_REF:0000002
RGD GO_Central Ensembl InterPro
PMID:17101796 PMID:17715393 PMID:22357600 PMID:37548402 PMID:28993448 PMID:27239029 PMID:31778749 PMID:35641779 More...
GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 MGI:3770484 MGI:5284784 , RGD:401901235 , RGD:329848961 , RGD:329845874 , RGD:329845873 , RGD:329845872
NCBI chr 7:108,810,627...109,054,420
Ensembl chr 7:108,810,628...109,054,691
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Rbfox3
RNA binding fox-1 homolog 3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:103,720,355...104,157,277
Ensembl chr10:103,720,636...104,156,935
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Rbm11
RNA binding motif protein 11
acts_upstream_of_or_within involved_in
ISO IBA
(PMID:21984414) GO_REF:0000033
RGD GO_Central
PMID:21984414
GO_REF:0000033
NCBI chr11:14,234,851...14,244,092
Ensembl chr11:14,234,890...14,244,090
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Rbm15
RNA binding motif protein 15
involved_in
ISO IBA
(PMID:26575292) GO_REF:0000033 (MGI:6158801|PMID:25468569)
RGD GO_Central
PMID:25468569 PMID:26575292
GO_REF:0000033 MGI:6158801
NCBI chr 2:194,945,974...194,954,498
Ensembl chr 2:194,945,974...194,954,703
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Rbm15b
RNA binding motif protein 15B
involved_in
ISO IBA
(PMID:16129689) GO_REF:0000033
RGD GO_Central
PMID:16129689
GO_REF:0000033
NCBI chr 8:107,543,613...107,546,678
Ensembl chr 8:107,525,898...107,551,696
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Rbm20
RNA binding motif protein 20
involved_in
IMP IDA
PMID:33805770 PMID:27289039
UniProt
PMID:33805770 PMID:27289039
RGD:152995553 , RGD:152995577
NCBI chr 1:252,683,760...252,907,465
Ensembl chr 1:252,683,771...252,886,060
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Rbm24
RNA binding motif protein 24
involved_in
ISO IBA IDA
(PMID:26844700), (PMID:26990106), (PMID:29104163) GO_REF:0000033 PMID:27289039 (MGI:6148527|PMID:25313962)
RGD GO_Central
PMID:25313962 PMID:26844700 PMID:26990106 PMID:29104163 PMID:27289039
GO_REF:0000033 MGI:6148527 , RGD:152995577
NCBI chr17:18,275,681...18,288,231
Ensembl chr17:18,275,688...18,288,102
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Rbm25
RNA binding motif protein 25
involved_in
ISO IBA
(PMID:18663000) GO_REF:0000033
RGD GO_Central
PMID:18663000
GO_REF:0000033
NCBI chr 6:103,271,775...103,319,090
Ensembl chr 6:103,271,801...103,317,854
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Rbm25l1
RNA binding motif protein 25-like 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:10,267,026...10,270,510
Ensembl chr10:10,267,260...10,269,710
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Rbm4
RNA binding motif protein 4
involved_in acts_upstream_of_or_within
ISO
(PMID:12628928), (PMID:16260624), (PMID:16777844), (PMID:16934801), (PMID:21518792) MGI:5467987|MGI:5467988 (PMID:23129807)
RGD
PMID:12628928 PMID:16260624 PMID:16777844 PMID:16934801 PMID:21518792 PMID:23129807 More...
NCBI chr 1:202,078,442...202,087,506
Ensembl chr 1:202,085,279...202,105,380
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Rbm47
RNA binding motif protein 47
involved_in
ISO
(PMID:31358901)
RGD
PMID:31358901
NCBI chr14:42,053,290...42,191,572
Ensembl chr14:42,154,142...42,189,431
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Rbm5
RNA binding motif protein 5
involved_in
ISO IEA ISS
(PMID:18840686), (PMID:18951082) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:18840686 PMID:18951082
GO_REF:0000024 GO_REF:0000107
NCBI chr 8:108,420,220...108,449,481
Ensembl chr 8:108,420,222...108,449,430
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Rbm8a
RNA binding motif protein 8A
involved_in
ISS ISO
GO_REF:0000024 (PMID:22203037)
UniProt RGD
PMID:22203037
GO_REF:0000024
NCBI chr 2:184,165,189...184,167,959
Ensembl chr 2:184,165,193...184,167,959
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Rbmx
RNA binding motif protein, X-linked
involved_in
ISO
(PMID:12165565), (PMID:12761049)
RGD
PMID:12165565 PMID:12761049
NCBI chr X:135,305,237...135,314,806
Ensembl chr X:135,305,325...135,314,743
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Rbmxl1
Rbmx like 1
involved_in
IDA
PMID:19282290
UniProt
PMID:19282290
RGD:2316827
NCBI chr19:29,407,902...29,411,519
Ensembl chr19:29,407,912...29,412,859
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Rbpms
RNA binding protein, mRNA processing factor
involved_in
IMP
PMID:37548402
UniProt
PMID:37548402
RGD:401901235
NCBI chr16:58,239,370...58,395,424
Ensembl chr16:58,239,474...58,395,426
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Rbpms2
RNA binding protein, mRNA processing factor 2
involved_in
IDA
PMID:31283468
UniProt
PMID:31283468
RGD:243049249
NCBI chr 8:66,153,169...66,184,278
Ensembl chr 8:66,153,593...66,184,268
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Rest
RE1-silencing transcription factor
involved_in
ISS ISO
GO_REF:0000024 (MGI:6201823|PMID:21884984)
UniProt RGD
PMID:21884984
GO_REF:0000024 MGI:6201823
NCBI chr14:30,859,109...30,879,828
Ensembl chr14:30,862,553...30,894,354
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Rnps1
RNA binding protein with serine rich domain 1
involved_in
ISO ISS
(PMID:22203037) GO_REF:0000024
RGD UniProt
PMID:22203037
GO_REF:0000024
NCBI chr10:13,445,516...13,455,858
Ensembl chr10:13,445,653...13,455,858
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Sap18
Sin3A associated protein 18
involved_in
ISO
(PMID:20966198), (PMID:22203037)
RGD
PMID:20966198 PMID:22203037
NCBI chr15:31,943,228...31,947,534
Ensembl chr15:31,943,230...31,950,038 Ensembl chr10:31,943,230...31,950,038
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Smu1
SMU1, DNA replication regulator and spliceosomal factor
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr 5:55,856,691...55,875,262
Ensembl chr 5:55,856,246...55,875,300
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Srrm4
serine/arginine repetitive matrix 4
involved_in acts_upstream_of_or_within
ISO
(PMID:29961578) MGI:1856676 (PMID:23055939) (MGI:6201863|PMID:25727884)
RGD
PMID:23055939 PMID:25727884 PMID:29961578
MGI:6201863
NCBI chr12:39,998,975...40,158,897
Ensembl chr12:39,999,488...40,155,725
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Srsf12
serine and arginine rich splicing factor 12
involved_in
ISO
(PMID:11684676)
RGD
PMID:11684676
NCBI chr 5:47,606,526...47,631,509
Ensembl chr 5:47,606,285...47,629,778
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Srsf2
serine and arginine rich splicing factor 2
acts_upstream_of_or_within
ISO
(PMID:21470964)
RGD
PMID:21470964
NCBI chr10:102,052,158...102,055,365
Ensembl chr10:102,052,314...102,055,338
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Srsf6
serine and arginine rich splicing factor 6
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 (PMID:23132731) (PMID:24440982)
UniProt RGD
PMID:23132731 PMID:24440982
GO_REF:0000024
NCBI chr 3:151,589,546...151,594,869
Ensembl chr 3:151,589,535...151,594,860
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Thrap3
thyroid hormone receptor associated protein 3
involved_in
ISO ISS
(PMID:20932480) GO_REF:0000024
RGD UniProt
PMID:20932480
GO_REF:0000024
NCBI chr 5:138,445,284...138,487,544
Ensembl chr 5:138,445,295...138,487,477
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Tia1
TIA1 cytotoxic granule-associated RNA binding protein
involved_in
ISO
(PMID:14966131), (PMID:17580305) (MGI:6827199|PMID:11514562), (MGI:6827311|PMID:10938105)
RGD
PMID:10938105 PMID:11514562 PMID:14966131 PMID:17580305
MGI:6827199 MGI:6827311
NCBI chr 4:118,852,765...118,883,252
Ensembl chr 4:118,852,837...118,880,586
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Tra2b
transformer 2 beta
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:12165565), (PMID:12761049), (PMID:25689357)
UniProt Ensembl RGD
PMID:12165565 PMID:12761049 PMID:25689357
GO_REF:0000024 GO_REF:0000107
NCBI chr11:78,788,880...78,807,252
Ensembl chr11:78,788,884...78,807,249
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Wtap
WT1 associated protein
involved_in
ISO IBA
(PMID:24407421) GO_REF:0000033
RGD GO_Central
PMID:24407421
GO_REF:0000033
NCBI chr 1:47,665,965...47,691,067
Ensembl chr 1:47,665,965...47,691,065
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Ythdc1
YTH N6-methyladenosine RNA binding protein C1
involved_in acts_upstream_of_or_within
IEA ISO IBA
GO_REF:0000107 (PMID:29799838) GO_REF:0000033
Ensembl RGD GO_Central
PMID:29799838
GO_REF:0000033 GO_REF:0000107
NCBI chr14:21,185,438...21,215,934
Ensembl chr14:21,185,440...21,216,028
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Zbtb7a
zinc finger and BTB domain containing 7a
involved_in
ISO ISS IEA
(PMID:24514149) GO_REF:0000024 GO_REF:0000107
RGD UniProt Ensembl
PMID:24514149
GO_REF:0000024 GO_REF:0000107
NCBI chr 7:8,561,015...8,578,243
Ensembl chr 7:8,563,779...8,576,539
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Hnrnpk
heterogeneous nuclear ribonucleoprotein K
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr17:6,262,936...6,275,001
Ensembl chr17:6,262,998...6,274,997
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Jmjd6
jumonji domain containing 6, arginine demethylase and lysine hydroxylase
involved_in
ISO IEA ISS
(PMID:19574390) GO_REF:0000107 (MGI:4940413|PMID:21300889) GO_REF:0000024
RGD Ensembl UniProt
PMID:19574390 PMID:21300889
GO_REF:0000024 GO_REF:0000107 MGI:4940413
NCBI chr10:102,041,131...102,047,182
Ensembl chr10:102,041,120...102,047,182
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Khdrbs1
KH RNA binding domain containing, signal transduction associated 1
involved_in
ISO
(MGI:5302133|PMID:22196734)
RGD
PMID:22196734
MGI:5302133
NCBI chr 5:142,051,844...142,089,175
Ensembl chr 5:142,063,570...142,089,180
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Khdrbs2
KH RNA binding domain containing, signal transduction associated 2
involved_in
ISO
(MGI:5302133|PMID:22196734)
RGD
PMID:22196734
MGI:5302133
NCBI chr 9:34,447,023...34,953,684
Ensembl chr 9:34,447,056...34,915,530
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Khdrbs3
KH RNA binding domain containing, signal transduction associated 3
involved_in
ISO IEA
(MGI:5302133|PMID:22196734) GO_REF:0000117
RGD UniProt
PMID:22196734
GO_REF:0000117 MGI:5302133
NCBI chr 7:100,837,707...100,995,644
Ensembl chr 7:100,837,934...100,988,460
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Larp7
La ribonucleoprotein 7, transcriptional regulator
involved_in
ISO ISS
(PMID:32017898) (MGI:6400674|PMID:32017896) GO_REF:0000024
RGD UniProt
PMID:32017896 PMID:32017898
GO_REF:0000024 MGI:6400674
NCBI chr 2:215,997,641...216,012,833
Ensembl chr 2:215,997,649...216,012,865
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LOC100359916
heterogeneous nuclear ribonucleoprotein K-like
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:58,668,326...58,670,222
Ensembl chr 5:58,668,327...58,670,220
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Mettl16
methyltransferase 16, RNA N6-adenosine
involved_in NOT|involved_in
ISO
(PMID:28525753) (MGI:6114846|PMID:29262316)
RGD
PMID:28525753 PMID:29262316
MGI:6114846
NCBI chr10:59,640,915...59,697,291
Ensembl chr10:59,640,972...59,687,061
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Qki
QKI, KH domain containing RNA binding
involved_in
ISS IBA ISO IEA
GO_REF:0000024 GO_REF:0000033 (MGI:6108922|PMID:29021242), (MGI:6504661|PMID:33397958), (MGI:6514532|PMID:33378678), (MGI:7485690|PMID:36627242) (PMID:27029405), (PMID:31331967) (PMID:34428287) GO_REF:0000107
UniProt GO_Central RGD Ensembl
PMID:27029405 PMID:29021242 PMID:31331967 PMID:33378678 PMID:33397958 PMID:34428287 PMID:36627242 More...
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:6108922 MGI:6504661 MGI:6514532 MGI:7485690
NCBI chr 1:50,387,716...50,501,568
Ensembl chr 1:50,387,698...50,498,831
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Rbm20
RNA binding motif protein 20
involved_in
ISO
(PMID:26604136), (PMID:27496873), (PMID:30948719), (PMID:32840935) (PMID:33188278)
RGD
PMID:26604136 PMID:27496873 PMID:30948719 PMID:32840935 PMID:33188278
NCBI chr 1:252,683,760...252,907,465
Ensembl chr 1:252,683,771...252,886,060
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Rbm39
RNA binding motif protein 39
involved_in
ISO
(PMID:15694343), (PMID:28302793), (PMID:28437394)
RGD
PMID:15694343 PMID:28302793 PMID:28437394
NCBI chr 3:144,662,998...144,696,222
Ensembl chr 3:144,663,001...144,696,213
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Sf1
splicing factor 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:203,670,016...203,683,432
Ensembl chr 1:203,670,018...203,684,330
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Son
SON DNA and RNA binding protein
involved_in
ISO IBA
(PMID:21504830) GO_REF:0000033
RGD GO_Central
PMID:21504830
GO_REF:0000033
NCBI chr11:30,850,890...30,923,167
Ensembl chr11:30,892,005...30,923,167
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Srrm1
serine and arginine repetitive matrix 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:147,559,515...147,591,895
Ensembl chr 5:147,559,514...147,591,849
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Srsf10
serine and arginine rich splicing factor 10
involved_in
ISO
(PMID:26876937)
RGD
PMID:26876937
NCBI chr 5:148,088,759...148,102,964
Ensembl chr 5:148,088,823...148,101,768
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Srsf3
serine and arginine rich splicing factor 3
involved_in
ISO
(PMID:26876937), (PMID:32440474)
RGD
PMID:26876937 PMID:32440474
NCBI chr20:7,091,928...7,101,860
Ensembl chr20:7,091,910...7,101,078
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Tia1
TIA1 cytotoxic granule-associated RNA binding protein
involved_in
ISO
(PMID:11106748), (PMID:7488725)
RGD
PMID:7488725 PMID:11106748
NCBI chr 4:118,852,765...118,883,252
Ensembl chr 4:118,852,837...118,880,586
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Ythdc1
YTH N6-methyladenosine RNA binding protein C1
involved_in
ISO ISS
(PMID:26876937), (PMID:28984244) GO_REF:0000024
RGD UniProt
PMID:26876937 PMID:28984244
GO_REF:0000024
NCBI chr14:21,185,438...21,215,934
Ensembl chr14:21,185,440...21,216,028
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Crnkl1
crooked neck pre-mRNA splicing factor 1
involved_in
ISO IBA ISS
(PMID:12084575) GO_REF:0000033 GO_REF:0000024
RGD GO_Central UniProt
PMID:12084575
GO_REF:0000024 GO_REF:0000033
NCBI chr 3:133,338,593...133,354,329
Ensembl chr 3:133,337,039...133,354,302 Ensembl chr 6:133,337,039...133,354,302
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Ddx39b
DExD-box helicase 39B
involved_in
ISO IEA
(PMID:18593880) GO_REF:0000107
RGD Ensembl
PMID:18593880
GO_REF:0000107
NCBI chr20:3,547,702...3,585,064
Ensembl chr20:3,572,056...3,584,996
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Gcfc2
GC-rich sequence DNA-binding factor 2
involved_in
ISO
(PMID:24304693)
RGD
PMID:24304693
NCBI chr 4:114,481,613...114,519,268
Ensembl chr 4:114,481,607...114,519,962
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Gemin2
gem (nuclear organelle) associated protein 2
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 6:76,706,424...76,721,154
Ensembl chr 6:76,707,523...76,721,153
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Gemin6
gem (nuclear organelle) associated protein 6
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 6:14,786,090...14,790,617
Ensembl chr 6:14,786,070...14,790,612
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Ncbp1
nuclear cap binding protein subunit 1
involved_in
ISO
(PMID:23793891)
RGD
PMID:23793891
NCBI chr 5:60,416,023...60,449,004
Ensembl chr 5:60,415,982...60,449,089
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Prpf19
pre-mRNA processing factor 19
involved_in
ISO IEA
(PMID:16332694) GO_REF:0000107
RGD Ensembl
PMID:16332694
GO_REF:0000107
NCBI chr 1:207,541,582...207,552,664
Ensembl chr 1:207,541,595...207,552,662
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Rbm5
RNA binding motif protein 5
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:18951082)
UniProt Ensembl RGD
PMID:18951082
GO_REF:0000024 GO_REF:0000107
NCBI chr 8:108,420,220...108,449,481
Ensembl chr 8:108,420,222...108,449,430
G
Rsrp1
arginine and serine rich protein 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:34042961)
UniProt RGD
PMID:34042961
GO_REF:0000024
NCBI chr 5:147,147,774...147,151,523
Ensembl chr 5:147,147,784...147,151,523
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Scaf11
SR-related CTD-associated factor 11
involved_in
ISO IBA
(PMID:9447963) GO_REF:0000033
RGD GO_Central
PMID:9447963
GO_REF:0000033
NCBI chr 7:127,571,678...127,624,089
Ensembl chr 7:127,574,463...127,624,101
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Sf3a2
splicing factor 3A subunit 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:8,909,507...8,916,104
Ensembl chr 7:8,909,507...8,915,530
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Sf3b1
splicing factor 3b, subunit 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 9:56,492,403...56,532,300
Ensembl chr 9:56,492,403...56,532,300
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Smn1
survival of motor neuron 1, telomeric
involved_in
ISO
(PMID:9845364)
RGD
PMID:9845364
NCBI chr 2:31,490,018...31,501,065
Ensembl chr 2:31,490,015...31,501,060
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Srpk1
SRSF protein kinase 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:6,645,809...6,682,448
Ensembl chr20:6,645,809...6,682,134
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Srpk2
SRSF protein kinase 2
involved_in
ISO IBA
(PMID:9472028) GO_REF:0000033 (MGI:1195449|PMID:9446799)
RGD GO_Central
PMID:9446799 PMID:9472028
GO_REF:0000033 MGI:1195449
NCBI chr 4:11,464,684...11,655,993
Ensembl chr 4:11,464,674...11,655,990
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Srpk3
SRSF protein kinase 3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr X:151,510,452...151,515,208
Ensembl chr X:151,510,539...151,515,198
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U2af2
U2 small nuclear RNA auxiliary factor 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:68,760,911...68,779,730
Ensembl chr 1:68,760,924...68,778,492
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Usp39
ubiquitin specific peptidase 39
involved_in
ISO
(PMID:11350945)
RGD
PMID:11350945
NCBI chr 4:104,373,948...104,406,359
Ensembl chr 4:104,373,955...104,406,359
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Zrsr2
zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2
involved_in
ISO
(PMID:21041408)
RGD
PMID:21041408
NCBI chr X:30,547,424...30,571,613
Ensembl chr X:30,547,536...30,570,125
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Dhx8
DEAH-box helicase 8
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:86,667,641...86,704,198
Ensembl chr10:86,667,834...86,705,137
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Dnajc17
DnaJ heat shock protein family (Hsp40) member C17
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:106,162,197...106,195,771
Ensembl chr 3:106,162,197...106,195,751
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Tfip11
tuftelin interacting protein 11
involved_in
ISO IBA IEA ISS
(PMID:19103666) GO_REF:0000033 GO_REF:0000002 (MGI:5545993|PMID:19857462) GO_REF:0000024
RGD GO_Central InterPro UniProt
PMID:19103666 PMID:19857462
GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 MGI:5545993
NCBI chr12:44,299,619...44,311,851
Ensembl chr12:44,299,622...44,311,855
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AABR07042226.1
involved_in
IEA
GO_REF:0000104
UniProt
GO_REF:0000104
Ensembl chr X:144,806,986...144,812,552
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Clns1a
chloride nucleotide-sensitive channel 1A
involved_in
ISS IBA IEA ISO
GO_REF:0000024 GO_REF:0000033 GO_REF:0000002 (PMID:18984161)
UniProt GO_Central InterPro RGD
PMID:18984161
GO_REF:0000002 GO_REF:0000024 GO_REF:0000033
NCBI chr 1:152,019,369...152,039,670
Ensembl chr 1:152,019,378...152,039,661
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Coil
coilin
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:73,789,077...73,810,378
Ensembl chr10:73,789,488...73,810,393
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Ddx20
DEAD-box helicase 20
involved_in
ISO IBA
(PMID:12067652), (PMID:18984161) GO_REF:0000033
RGD GO_Central
PMID:12067652 PMID:18984161
GO_REF:0000033
NCBI chr 2:193,158,761...193,168,484
Ensembl chr 2:193,158,823...193,166,774
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ENSRNOG00000063060
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
Ensembl chr 6:84,273,587...84,274,496
G
ENSRNOG00000063333
involved_in
IEA
GO_REF:0000104
UniProt
GO_REF:0000104
Ensembl chr X:93,293,758...93,294,114
G
ENSRNOG00000064062
involved_in
IEA
GO_REF:0000104
UniProt
GO_REF:0000104
Ensembl chr19:33,454,456...33,455,388
G
ENSRNOG00000066758
involved_in
IEA
GO_REF:0000104
UniProt
GO_REF:0000104
Ensembl chr X:14,995,412...14,996,454
G
ENSRNOG00000068015
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
Ensembl chr X:133,878,251...133,878,959
G
ENSRNOG00000068876
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
Ensembl chr 9:112,301,511...112,302,585
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Gemin2
gem (nuclear organelle) associated protein 2
involved_in
ISS IBA ISO
GO_REF:0000024 GO_REF:0000033 (PMID:12067652), (PMID:18984161), (PMID:31799625)
UniProt GO_Central RGD
PMID:12067652 PMID:18984161 PMID:31799625
GO_REF:0000024 GO_REF:0000033
NCBI chr 6:76,706,424...76,721,154
Ensembl chr 6:76,707,523...76,721,153
G
Gemin4
gem (nuclear organelle) associated protein 4
involved_in
ISO IBA
(PMID:12067652), (PMID:18984161) GO_REF:0000033
RGD GO_Central
PMID:12067652 PMID:18984161
GO_REF:0000033
NCBI chr10:61,062,420...61,073,529
Ensembl chr10:61,066,425...61,073,431 Ensembl chr10:61,066,425...61,073,431
G
Gemin5
gem (nuclear organelle) associated protein 5
involved_in
ISO IBA
(PMID:12067652), (PMID:18984161) GO_REF:0000033
RGD GO_Central
PMID:12067652 PMID:18984161
GO_REF:0000033
NCBI chr10:42,295,729...42,342,902
Ensembl chr10:42,297,515...42,342,892
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Gemin6
gem (nuclear organelle) associated protein 6
involved_in
ISO IBA
(PMID:12067652), (PMID:18984161) GO_REF:0000033
RGD GO_Central
PMID:12067652 PMID:18984161
GO_REF:0000033
NCBI chr 6:14,786,090...14,790,617
Ensembl chr 6:14,786,070...14,790,612
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Gemin7
gem (nuclear organelle) associated protein 7
involved_in
ISO IBA
(PMID:12067652), (PMID:18984161) GO_REF:0000033
RGD GO_Central
PMID:12067652 PMID:18984161
GO_REF:0000033
NCBI chr 1:79,215,054...79,228,769
Ensembl chr 1:79,214,919...79,224,994
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Gemin7l1
gem (nuclear organelle) associated protein 7-like 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:78,269,910...78,270,681
Ensembl chr 4:78,269,888...78,270,669
G
Gemin8
gem (nuclear organelle) associated protein 8
involved_in
ISO IBA
(PMID:12067652), (PMID:16434402), (PMID:18984161) GO_REF:0000033
RGD GO_Central
PMID:12067652 PMID:16434402 PMID:18984161
GO_REF:0000033
NCBI chr X:28,259,806...28,278,641
Ensembl chr X:28,259,793...28,278,663
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Glod4
glyoxalase domain containing 4
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:61,077,535...61,095,876
Ensembl chr10:61,066,421...61,095,898
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LOC108350623
small nuclear ribonucleoprotein F-like
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 3:155,116,497...155,116,945
G
LOC108352309
small nuclear ribonucleoprotein F-like
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr11:33,533,614...33,533,927
Ensembl chr11:33,533,512...33,533,871
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LOC120099250
U1 small nuclear ribonucleoprotein C-like
involved_in
IEA
GO_REF:0000104
UniProt
GO_REF:0000104
NCBI chr X:135,673,708...135,678,865
G
LOC120100604
small nuclear ribonucleoprotein G-like
involved_in
IEA
GO_REF:0000104
UniProt
GO_REF:0000104
NCBI chr 2:186,400,521...186,402,953
Ensembl chr 2:186,400,857...186,401,087
G
Lsm4
LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr16:18,755,481...18,761,106
Ensembl chr16:18,755,484...18,760,926
G
Prmt5
protein arginine methyltransferase 5
involved_in
ISO
(PMID:17709427)
RGD
PMID:17709427
NCBI chr15:27,968,893...27,978,291
Ensembl chr15:27,968,910...27,978,296
G
Prmt7
protein arginine methyltransferase 7
involved_in
ISO IEA ISS
(PMID:17709427) GO_REF:0000104 GO_REF:0000024
RGD UniProt
PMID:17709427
GO_REF:0000024 GO_REF:0000104
NCBI chr19:34,110,724...34,161,531
Ensembl chr19:34,110,747...34,162,577
G
Prpf4b
pre-mRNA processing factor 4B
involved_in
ISS ISO
GO_REF:0000024 (PMID:12077342)
UniProt RGD
PMID:12077342
GO_REF:0000024
NCBI chr17:29,985,343...30,020,285
Ensembl chr17:29,985,343...30,019,625
G
Sart3
spliceosome associated factor 3, U4/U6 recycling protein
involved_in NOT|involved_in
ISO
(PMID:14749385), (PMID:15314151) (PMID:15314151)
RGD
PMID:14749385 PMID:15314151
NCBI chr12:42,859,026...42,887,041
Ensembl chr12:42,859,305...42,887,038
G
Smn1
survival of motor neuron 1, telomeric
involved_in
ISS IBA ISO
GO_REF:0000024 GO_REF:0000033 (PMID:12067652), (PMID:18984161)
UniProt GO_Central RGD
PMID:12067652 PMID:18984161
GO_REF:0000024 GO_REF:0000033
NCBI chr 2:31,490,018...31,501,065
Ensembl chr 2:31,490,015...31,501,060
G
Snrpb
small nuclear ribonucleoprotein polypeptides B and B1
involved_in
ISO ISS
(PMID:18984161) GO_REF:0000024
RGD UniProt
PMID:18984161
GO_REF:0000024
NCBI chr 3:117,369,816...117,379,344
Ensembl chr 3:117,370,100...117,379,339
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Snrpc
small nuclear ribonucleoprotein polypeptide C
involved_in
ISO IEA
(PMID:8972845) GO_REF:0000104
RGD UniProt
PMID:8972845
GO_REF:0000104
NCBI chr20:5,888,453...5,906,638
Ensembl chr20:5,888,453...5,906,638
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Snrpd1
small nuclear ribonucleoprotein D1 polypeptide
involved_in
ISO IBA
(PMID:18984161) GO_REF:0000033
RGD GO_Central
PMID:18984161
GO_REF:0000033
NCBI chr18:1,696,838...1,707,400
Ensembl chr18:1,696,852...1,708,256
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Snrpd2
small nuclear ribonucleoprotein D2 polypeptide
involved_in
ISO IBA
(PMID:18984161) GO_REF:0000033
RGD GO_Central
PMID:18984161
GO_REF:0000033
NCBI chr 1:78,798,377...78,801,227
Ensembl chr 1:78,798,377...78,803,351
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Snrpd3
small nuclear ribonucleoprotein D3 polypeptide
involved_in
ISO IBA
(PMID:18984161) GO_REF:0000033
RGD GO_Central
PMID:18984161
GO_REF:0000033
NCBI chr20:13,130,112...13,145,947
Ensembl chr20:13,130,119...13,145,978
G
Snrpd3l1
small nuclear ribonucleoprotein D3 polypeptide like 1
involved_in
IEA
GO_REF:0000104
UniProt
GO_REF:0000104
NCBI chr19:12,396,026...12,396,454
Ensembl chr19:12,396,026...12,396,454
G
Snrpe
small nuclear ribonucleoprotein polypeptide E
involved_in
ISO IBA
(PMID:18984161) GO_REF:0000033
RGD GO_Central
PMID:18984161
GO_REF:0000033
NCBI chr13:45,050,986...45,057,231
Ensembl chr13:45,050,986...45,057,310 Ensembl chr 8:45,050,986...45,057,310
G
Snrpepl2
small nuclear ribonucleoprotein polypeptide E like 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:133,709,656...133,710,137
Ensembl chr 1:133,709,797...133,710,075
G
Snrpf
small nuclear ribonucleoprotein polypeptide F
involved_in
ISO
(PMID:18984161)
RGD
PMID:18984161
NCBI chr 7:28,130,427...28,137,129
Ensembl chr 7:28,130,427...28,137,129
G
Snrpg
small nuclear ribonucleoprotein polypeptide G
involved_in
ISO
(PMID:18984161)
RGD
PMID:18984161
NCBI chr 4:118,812,278...118,819,827
Ensembl chr 4:118,812,252...118,819,826
G
Strap
serine/threonine kinase receptor associated protein
involved_in
ISS IBA ISO
GO_REF:0000024 GO_REF:0000033 (PMID:12067652), (PMID:18984161)
UniProt GO_Central RGD
PMID:12067652 PMID:18984161
GO_REF:0000024 GO_REF:0000033
NCBI chr 4:170,646,042...170,660,291
Ensembl chr 4:170,646,001...170,660,828
G
Tdrd6
tudor domain containing 6
involved_in
ISO
(MGI:5904379|PMID:28263986)
RGD
PMID:28263986
MGI:5904379
NCBI chr 9:17,344,033...17,359,348
Ensembl chr 9:17,344,026...17,359,344
G
Tssc4
tumor suppressing subtransferable candidate 4
involved_in
ISO ISS
(PMID:35188580) GO_REF:0000024
RGD UniProt
PMID:35188580
GO_REF:0000024
NCBI chr 1:198,251,986...198,254,810
Ensembl chr 1:198,235,487...198,254,980
G
Zfp341
zinc finger protein 341
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:143,122,699...143,156,250
Ensembl chr 3:143,119,093...143,156,249
G
Aar2
AAR2 splicing factor
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:145,057,368...145,079,838
Ensembl chr 3:145,057,458...145,080,166
G
Linc00176
long intergenic non-protein coding RNA 176
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr 3:168,771,350...168,775,133
Ensembl chr 3:168,704,299...168,774,991
G
Lsm2
LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
acts_upstream_of_or_within
ISO
(PMID:10523320)
RGD
PMID:10523320
NCBI chr20:3,843,467...3,847,217
Ensembl chr20:3,843,466...3,847,266
G
Prpf19
pre-mRNA processing factor 19
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:20595234)
UniProt Ensembl RGD
PMID:20595234
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:207,541,582...207,552,664
Ensembl chr 1:207,541,595...207,552,662
G
Prpf3
pre-mRNA processing factor 3
involved_in
ISO
(PMID:20595234)
RGD
PMID:20595234
NCBI chr 2:183,379,041...183,403,526
Ensembl chr 2:183,378,718...183,403,489
G
Prpf31
pre-mRNA processing factor 31
acts_upstream_of_or_within involved_in
ISO
(PMID:11867543) (PMID:15257298), (PMID:20118938)
RGD
PMID:11867543 PMID:15257298 PMID:20118938
NCBI chr 1:65,575,887...65,587,561
Ensembl chr 1:65,575,887...65,587,873
G
Prpf4b
pre-mRNA processing factor 4B
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:20118938) GO_REF:0000024
Ensembl RGD UniProt
PMID:20118938
GO_REF:0000024 GO_REF:0000107
NCBI chr17:29,985,343...30,020,285
Ensembl chr17:29,985,343...30,019,625
G
Prpf6
pre-mRNA processing factor 6
involved_in
IEA ISO ISS IBA
GO_REF:0000107 (PMID:15257298), (PMID:20118938) GO_REF:0000024 GO_REF:0000033
Ensembl RGD UniProt GO_Central
PMID:15257298 PMID:20118938
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr 3:168,706,952...168,771,191
Ensembl chr 3:168,704,299...168,774,991
G
Prpf8
pre-mRNA processing factor 8
involved_in
ISO IBA
(PMID:20595234) GO_REF:0000033
RGD GO_Central
PMID:20595234
GO_REF:0000033
NCBI chr10:60,331,494...60,354,606
Ensembl chr10:60,331,494...60,354,606
G
Sart3
spliceosome associated factor 3, U4/U6 recycling protein
involved_in
ISO
(PMID:12032085), (PMID:20595234)
RGD
PMID:12032085 PMID:20595234
NCBI chr12:42,859,026...42,887,041
Ensembl chr12:42,859,305...42,887,038
G
Tssc4
tumor suppressing subtransferable candidate 4
involved_in
ISO IEA ISS
(PMID:34131137) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:34131137
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:198,251,986...198,254,810
Ensembl chr 1:198,235,487...198,254,980
G
Usp4
ubiquitin specific peptidase 4
involved_in
ISS ISO
GO_REF:0000024 (PMID:20595234)
UniProt RGD
PMID:20595234
GO_REF:0000024
NCBI chr 8:109,035,402...109,079,382
Ensembl chr 8:109,036,099...109,080,427
G
Snrnp200
small nuclear ribonucleoprotein U5 subunit 200
involved_in
ISO IBA IEA
(PMID:35241646) GO_REF:0000033 GO_REF:0000107
RGD GO_Central Ensembl
PMID:35241646
GO_REF:0000033 GO_REF:0000107
NCBI chr 3:114,428,854...114,458,194
Ensembl chr 3:114,428,854...114,458,182
G
Ddx42
DEAD-box helicase 42
involved_in
ISO
(PMID:36797247)
RGD
PMID:36797247
NCBI chr10:91,148,926...91,180,940
Ensembl chr10:91,148,254...91,180,939
G
Ddx46
DEAD-box helicase 46
involved_in
ISS ISO
GO_REF:0000024 (PMID:36797247)
UniProt RGD
PMID:36797247
GO_REF:0000024
NCBI chr17:8,942,070...8,988,440
Ensembl chr17:8,944,454...8,988,439
G
Htatsf1
HIV-1 Tat specific factor 1
involved_in
ISO
(PMID:32494006), (PMID:34822310)
RGD
PMID:32494006 PMID:34822310
NCBI chr X:134,935,426...134,949,607
Ensembl chr X:134,935,426...134,949,607
G
Sf3a1
splicing factor 3A subunit 1
involved_in
ISO
(PMID:10882114), (PMID:11533230)
RGD
PMID:10882114 PMID:11533230
NCBI chr14:79,031,394...79,052,144
Ensembl chr14:79,031,394...79,052,144
G
Sf3a2
splicing factor 3A subunit 2
involved_in
ISO ISS
(PMID:11533230) GO_REF:0000024
RGD UniProt
PMID:11533230
GO_REF:0000024
NCBI chr 7:8,909,507...8,916,104
Ensembl chr 7:8,909,507...8,915,530
G
Sf3a3
splicing factor 3a, subunit 3
involved_in
ISO
(PMID:11533230)
RGD
PMID:11533230
NCBI chr 5:136,967,713...136,987,345
Ensembl chr 5:136,967,691...136,987,361
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all