nucleic acid metabolic process - Ontology Report

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ONTOLOGY REPORT - ANNOTATIONS

Term:	nucleic acid metabolic process	go back to main search page
Accession:	GO:0090304	browse the term
Definition:	Any cellular metabolic process involving nucleic acids.

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age-dependent telomere shortening
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Terf1	telomeric repeat binding factor (NIMA-interacting) 1			ISO	5	2,556,918	2,586,086	RGD:1624291	RGD
G	Terf1	telomeric repeat binding factor (NIMA-interacting) 1			IEA	5	2,556,918	2,586,086	RGD:1600115	ENSEMBL
base-excision repair, DNA ligation
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Hmgb1	high mobility group box 1			ISO				RGD:1624291	RGD
G	Hmgb2	high mobility group box 2			ISO	16	36,131,304	36,133,878	RGD:1624291	RGD
G	Hmgb2	high mobility group box 2			ISS	16	36,131,304	36,133,878	RGD:1600115	UniProtKB
DNA double-strand break processing involved in repair via single-strand annealing
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Rbbp8	retinoblastoma binding protein 8			IEA	18	3,266,565	3,333,153	RGD:1600115	ENSEMBL
G	Rbbp8	retinoblastoma binding protein 8			ISO	18	3,266,565	3,333,153	RGD:1624291	RGD
G	Rbbp8	retinoblastoma binding protein 8			ISO	18	3,266,565	3,333,153	RGD:1624291	RGD
G	Slx1b	SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)			ISO	1	185,843,372	185,848,919	RGD:1624291	RGD
G	Slx4	SLX4 structure-specific endonuclease subunit			ISO	10	11,778,216	11,816,839	RGD:1624291	RGD
DNA ligation
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Aptx	aprataxin			ISO	5	58,060,210	58,081,165	RGD:1624291	RGD
G	Aptx	aprataxin			IEA	5	58,060,210	58,081,165	RGD:1600115	ENSEMBL
G	Lig3	ligase III, DNA, ATP-dependent			IBA	10	71,000,287	71,021,398	RGD:1600115	RefGenome
G	Lig4	ligase IV, DNA, ATP-dependent			IDA	16	84,881,880	84,888,448	RGD:1601271	RGD
G	Lig4	ligase IV, DNA, ATP-dependent			ISO	16	84,881,880	84,888,448	RGD:1624291	RGD
G	Lig4	ligase IV, DNA, ATP-dependent			ISO	16	84,881,880	84,888,448	RGD:1624291	RGD
G	Lig4	ligase IV, DNA, ATP-dependent			ISO	16	84,881,880	84,888,448	RGD:1624291	RGD
G	Top2a	topoisomerase (DNA) II alpha			ISO	10	87,771,337	87,800,960	RGD:1624291	RGD
G	Xrcc4	X-ray repair complementing defective repair in Chinese hamster cells 4			ISO	2	19,904,490	20,158,358	RGD:1624291	RGD
DNA ligation involved in DNA recombination
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Lig4	ligase IV, DNA, ATP-dependent			ISO	16	84,881,880	84,888,448	RGD:1624291	RGD
G	Lig4	ligase IV, DNA, ATP-dependent			IEA	16	84,881,880	84,888,448	RGD:1600115	ENSEMBL
DNA ligation involved in DNA repair
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Lig1	ligase I, DNA, ATP-dependent			IEA	1	73,728,892	73,767,429	RGD:1600115	InterPro
G	Lig3	ligase III, DNA, ATP-dependent			IEA	10	71,000,287	71,021,398	RGD:1600115	InterPro
G	Lig4	ligase IV, DNA, ATP-dependent			ISO	16	84,881,880	84,888,448	RGD:1624291	RGD
G	Lig4	ligase IV, DNA, ATP-dependent			ISO	16	84,881,880	84,888,448	RGD:1624291	RGD
G	Lig4	ligase IV, DNA, ATP-dependent			IEA	16	84,881,880	84,888,448	RGD:1600115	ENSEMBL
G	LOC100911727	DNA ligase 1-like			IEA				RGD:1600115	InterPro
G	Xrcc4	X-ray repair complementing defective repair in Chinese hamster cells 4			ISO	2	19,904,490	20,158,358	RGD:1624291	RGD
G	Xrcc4	X-ray repair complementing defective repair in Chinese hamster cells 4			IEA	2	19,904,490	20,158,358	RGD:1600115	ENSEMBL
DNA metabolic process
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Dnase2b	deoxyribonuclease II beta			IEA	2	244,779,607	244,794,980	RGD:1600115	InterPro
G	Dntt	DNA nucleotidylexotransferase			ISO	1	246,199,856	246,231,792	RGD:1624291	RGD
G	Dntt	DNA nucleotidylexotransferase			IEA	1	246,199,856	246,231,792	RGD:1600115	ENSEMBL
G	Eme1	essential meiotic endonuclease 1 homolog 1 (S. pombe)			IEA	10	83,279,086	83,285,091	RGD:1600115	InterPro
G	Eme2	essential meiotic endonuclease 1 homolog 2 (S. pombe)			IEA	10	14,140,925	14,144,052	RGD:1600115	InterPro
G	LOC100912736	DNA repair protein RAD51 homolog 2-like			IEA				RGD:1600115	InterPro
G	Mki67	antigen identified by monoclonal antibody Ki-67			IEP	1	195,310,027	195,336,224	RGD:2317713	RGD
G	Parp1	poly (ADP-ribose) polymerase 1			ISO	13	96,309,670	96,341,486	RGD:1624291	RGD
G	Parp1	poly (ADP-ribose) polymerase 1			ISO	13	96,309,670	96,341,486	RGD:1624291	RGD
G	Rad51b	RAD51 homolog B (S. cerevisiae)			IEA	6	102,069,799	102,134,176	RGD:1600115	InterPro
G	Rad51d	RAD51 homolog D (S. cerevisiae)			IEA	10	71,092,798	71,107,418	RGD:1600115	InterPro
G	RGD1307897	similar to RIKEN cDNA C730036B14 gene			IEA	6	86,424,156	86,476,902	RGD:1600115	InterPro
G	Smarcal1	Swi/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1			ISS	9	71,780,870	71,827,780	RGD:1600115	UniProtKB
G	Smarcal1	Swi/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1			ISO	9	71,780,870	71,827,780	RGD:1624291	RGD
G	Spo11	SPO11 meiotic protein covalently bound to DSB			IEA	3	163,842,817	163,854,067	RGD:1600115	InterPro
G	Tefm	transcription elongation factor, mitochondrial			ISS	10	68,341,244	68,345,583	RGD:1600115	GOC
G	Wrn	Werner syndrome, RecQ helicase-like			ISO	16	62,535,144	62,668,700	RGD:1624291	RGD
G	Wrn	Werner syndrome, RecQ helicase-like			ISO	16	62,535,144	62,668,700	RGD:1624291	RGD
G	Wrn	Werner syndrome, RecQ helicase-like			ISO	16	62,535,144	62,668,700	RGD:1624291	RGD
DNA repair
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Alkbh1	alkB, alkylation repair homolog 1 (E. coli)			ISO	6	111,662,506	111,682,061	RGD:1624291	RGD
G	Alkbh1	alkB, alkylation repair homolog 1 (E. coli)			ISO	6	111,662,506	111,682,061	RGD:1624291	RGD
G	Alkbh3	alkB, alkylation repair homolog 3 (E. coli)			ISO	3	78,386,098	78,418,432	RGD:1624291	RGD
G	Alkbh3	alkB, alkylation repair homolog 3 (E. coli)			ISS	3	78,386,098	78,418,432	RGD:1600115	UniProtKB
G	Apex1	APEX nuclease (multifunctional DNA repair enzyme) 1			ISO	15	26,904,124	26,906,224	RGD:1624291	RGD
G	Apex1	APEX nuclease (multifunctional DNA repair enzyme) 1			ISS	15	26,904,124	26,906,224	RGD:1600115	UniProtKB
G	Apex2	APEX nuclease (apurinic/apyrimidinic endonuclease) 2			IEA	X	39,811,484	39,832,225	RGD:1600115	InterPro
G	Asf1a	ASF1 anti-silencing function 1 homolog A (S. cerevisiae)			IEA	20	32,261,624	32,276,470	RGD:1600115	ENSEMBL
G	Asf1a	ASF1 anti-silencing function 1 homolog A (S. cerevisiae)			ISO	20	32,261,624	32,276,470	RGD:1624291	RGD
G	Aste1	asteroid homolog 1 (Drosophila)			IEA	8	110,501,422	110,516,965	RGD:1600115	InterPro
G	Atm	ataxia telangiectasia mutated			ISO	8	56,894,746	56,996,565	RGD:1624291	RGD
G	Atm	ataxia telangiectasia mutated			ISO	8	56,894,746	56,996,565	RGD:1624291	RGD
G	Atm	ataxia telangiectasia mutated			ISO	8	56,894,746	56,996,565	RGD:1624291	RGD
G	Atm	ataxia telangiectasia mutated			IEA	8	56,894,746	56,996,565	RGD:1600115	ENSEMBL
G	Atr	ataxia telangiectasia and Rad3 related			ISO	8	100,936,342	101,014,881	RGD:1624291	RGD
G	Atrx	alpha thalassemia/mental retardation syndrome X-linked			IEA	X	93,903,794	94,051,337	RGD:1600115	UniProtKB
G	Bard1	BRCA1 associated RING domain 1			IEA	9	70,120,151	70,198,591	RGD:1600115	UniProtKB
G	Bccip	BRCA2 and CDKN1A interacting protein			IEA	1	193,205,778	193,211,504	RGD:1600115	UniProtKB
G	Blm	Bloom syndrome, RecQ helicase-like			ISO	1	136,271,573	136,358,077	RGD:1624291	RGD
G	Brca1	breast cancer 1, early onset			TAS	10	90,513,630	90,572,676	RGD:625542	RGD
G	Brca1	breast cancer 1, early onset			IEA	10	90,513,630	90,572,676	RGD:1600115	InterPro
G	Cdk2	cyclin dependent kinase 2			IEA	7	2,000,196	2,007,682	RGD:1600115	UniProtKB
G	Cdk7	cyclin-dependent kinase 7			IEA	2	31,500,629	31,525,590	RGD:1600115	UniProtKB
G	Cdk9	cyclin-dependent kinase 9			IEA	3	11,672,861	11,677,709	RGD:1600115	UniProtKB
G	Chek1	checkpoint kinase 1			ISO	8	37,954,322	37,974,748	RGD:1624291	RGD
G	Chek1	checkpoint kinase 1			ISO	8	37,954,322	37,974,748	RGD:1624291	RGD
G	Chek1	checkpoint kinase 1			IEA	8	37,954,322	37,974,748	RGD:1600115	ENSEMBL
G	Chrna4	cholinergic receptor, nicotinic, alpha 4 (neuronal)			ISO	3	170,171,214	170,185,998	RGD:1624291	RGD
G	Cry1	cryptochrome 1 (photolyase-like)			IEA	7	20,643,879	20,709,216	RGD:1600115	InterPro
G	Cry2	cryptochrome 2 (photolyase-like)			IEA	3	76,802,782	76,830,902	RGD:1600115	InterPro
G	Dclre1b	DNA cross-link repair 1B			IEA	2	199,025,718	199,034,230	RGD:1600115	UniProtKB
G	Ddb1	damage-specific DNA binding protein 1, 127kDa			TAS	1	213,095,187	213,120,986	RGD:632554	RGD
G	Dmap1	DNA methyltransferase 1-associated protein 1			IEA	5	137,997,648	138,005,652	RGD:1600115	InterPro
G	Dmc1	DNA meiotic recombinase 1			IEA	7	117,476,702	117,520,670	RGD:1600115	InterPro
G	Eepd1	endonuclease/exonuclease/phosphatase family domain containing 1			IEA	8	25,173,429	25,286,246	RGD:1600115	InterPro
G	Eid3	EP300 interacting inhibitor of differentiation 3			IEA	7	23,085,569	23,086,894	RGD:1600115	UniProtKB
G	Ercc1	excision repair cross-complementing rodent repair deficiency, complementation group 1			ISO	1	78,711,249	78,722,474	RGD:1624291	RGD
G	Ercc2	excision repair cross-complementing rodent repair deficiency, complementation group 2			ISO				RGD:1624291	RGD
G	Ercc3	excision repair cross-complementing rodent repair deficiency, complementation group 3			ISO	18	24,684,912	24,716,143	RGD:1624291	RGD
G	Ercc4	excision repair cross-complementing rodent repair deficiency, complementation group 4			ISO	10	2,144,262	2,177,554	RGD:1624291	RGD
G	Ercc4	excision repair cross-complementing rodent repair deficiency, complementation group 4			IEA	10	2,144,262	2,177,554	RGD:1600115	InterPro
G	Ercc4	excision repair cross-complementing rodent repair deficiency, complementation group 4			ISO	10	2,144,262	2,177,554	RGD:1624291	RGD
G	Ercc5	excision repair cross-complementing rodent repair deficiency, complementation group 5			ISO	9	43,248,023	43,293,196	RGD:1624291	RGD
G	Ercc6	excision repair cross-complementing rodent repair deficiency, complementation group 6			ISO	16	8,024,881	8,091,587	RGD:1624291	RGD
G	Ercc6	excision repair cross-complementing rodent repair deficiency, complementation group 6			ISO	16	8,024,881	8,091,587	RGD:1624291	RGD
G	Ercc6	excision repair cross-complementing rodent repair deficiency, complementation group 6			ISO	16	8,024,881	8,091,587	RGD:1624291	RGD
G	Exo1	exonuclease 1			IEA	13	91,619,024	91,644,366	RGD:1600115	InterPro
G	Fan1	FANCD2/FANCI-associated nuclease 1			ISO	1	118,784,938	118,811,928	RGD:1624291	RGD
G	Fancc	Fanconi anemia, complementation group C			IEA	17	7,254,528	7,341,500	RGD:1600115	UniProtKB
G	Fancd2	Fanconi anemia, complementation group D2			IEA	4	149,424,558	149,500,006	RGD:1600115	UniProtKB
G	Fanci	Fanconi anemia, complementation group I			IEA	1	135,144,029	135,196,828	RGD:1600115	InterPro
G	Fancl	Fanconi anemia, complementation group L			IEA	14	107,211,448	107,276,828	RGD:1600115	ENSEMBL
G	Fancl	Fanconi anemia, complementation group L			ISO	14	107,211,448	107,276,828	RGD:1624291	RGD
G	Fbxo6	F-box protein 6			IEA	5	165,223,009	165,226,420	RGD:1600115	UniProtKB
G	Fen1	flap structure-specific endonuclease 1			ISO	1	212,688,118	212,692,486	RGD:1624291	RGD
G	Foxm1	forkhead box M1			IEA	4	165,383,666	165,394,688	RGD:1600115	UniProtKB
G	Gen1	GEN1 Holliday junction 5' flap endonuclease			IEA	6	34,679,618	34,709,812	RGD:1600115	InterPro
G	H2afx	H2A histone family, member X			ISO	8	47,312,609	47,313,938	RGD:1624291	RGD
G	H2afx	H2A histone family, member X			ISO	8	47,312,609	47,313,938	RGD:1624291	RGD
G	Herc2	HECT and RLD domain containing E3 ubiquitin protein ligase 2			ISO	1	107,440,126	107,645,117	RGD:1624291	RGD
G	Hinfp	histone H4 transcription factor			IEA	8	47,274,973	47,281,678	RGD:1600115	ENSEMBL
G	Hinfp	histone H4 transcription factor			ISO	8	47,274,973	47,281,678	RGD:1624291	RGD
G	Hspa1a	heat shock protein 1A			ISO	20	3,945,716	3,959,552	RGD:1624291	RGD
G	Hspa1b	heat shock protein 1B			ISO	20	3,955,274	3,957,748	RGD:1624291	RGD
G	Hus1b	HUS1 checkpoint homolog b (S. pombe)			IEA	17	39,978,923	39,979,753	RGD:1600115	InterPro
G	Inip	INTS3 and NABP interacting protein			IEA	5	77,890,067	77,901,083	RGD:1600115	ENSEMBL
G	Inip	INTS3 and NABP interacting protein			ISO	5	77,890,067	77,901,083	RGD:1624291	RGD
G	Ino80c	INO80 complex subunit C			IEA	18	15,863,573	15,878,207	RGD:1600115	UniProtKB
G	Ino80e	INO80 complex subunit E			IEA	1	186,030,837	186,041,424	RGD:1600115	UniProtKB
G	Ints3	integrator complex subunit 3			IEA	2	182,650,164	182,702,440	RGD:1600115	ENSEMBL
G	Ints3	integrator complex subunit 3			ISO	2	182,650,164	182,702,440	RGD:1624291	RGD
G	Ints3	integrator complex subunit 3			ISO	2	182,650,164	182,702,440	RGD:1624291	RGD
G	Kctd13	potassium channel tetramerisation domain containing 13			TAS	1	186,104,306	186,122,853	RGD:1357162	UniProtKB
G	Kif22	kinesin family member 22			IEA	1	186,205,162	186,293,437	RGD:1600115	InterPro
G	Lig1	ligase I, DNA, ATP-dependent			IDA	1	73,728,892	73,767,429	RGD:724410	RGD
G	Lig1	ligase I, DNA, ATP-dependent			ISO	1	73,728,892	73,767,429	RGD:1624291	RGD
G	Lig1	ligase I, DNA, ATP-dependent		NOT	ISO	1	73,728,892	73,767,429	RGD:1624291	RGD
G	Lig4	ligase IV, DNA, ATP-dependent			ISO	16	84,881,880	84,888,448	RGD:1624291	RGD
G	Lig4	ligase IV, DNA, ATP-dependent			ISO	16	84,881,880	84,888,448	RGD:1624291	RGD
G	LOC498029	similar to RIKEN cDNA A730011L01 gene			IEA	10	108,867,383	108,882,929	RGD:1600115	ENSEMBL
G	LOC682704	similar to CG7220-PA, isoform A			IEA				RGD:1600115	UniProtKB
G	LOC684558	similar to regulator of nonsense transcripts 1			IEA				RGD:1600115	ENSEMBL
G	Mdc1	mediator of DNA damage checkpoint 1			IEA	20	3,042,953	3,057,607	RGD:1600115	UniProtKB
G	Mgmt	O-6-methylguanine-DNA methyltransferase			ISO	1	196,629,366	196,866,937	RGD:1624291	RGD
G	Mlh1	mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)			ISO	8	115,616,396	115,653,471	RGD:1624291	RGD
G	Mlh1	mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)			ISO	8	115,616,396	115,653,471	RGD:1624291	RGD
G	Morf4l2	mortality factor 4 like 2			IEA	X	124,382,809	124,393,906	RGD:1600115	UniProtKB
G	Msh2	mutS homolog 2 (E. coli)			ISO	6	11,199,906	11,258,350	RGD:1624291	RGD
G	Msh2	mutS homolog 2 (E. coli)			ISO	6	11,199,906	11,258,350	RGD:1624291	RGD
G	Msh3	mutS homolog 3 (E. coli)			ISO	2	22,462,934	22,606,874	RGD:1624291	RGD
G	Msh6	mutS homolog 6 (E. coli)			ISO	6	11,525,292	11,542,592	RGD:1624291	RGD
G	Mum1	melanoma associated antigen (mutated) 1			ISS	7	10,976,555	10,993,327	RGD:1600115	UniProtKB
G	Mum1	melanoma associated antigen (mutated) 1			ISO	7	10,976,555	10,993,327	RGD:1624291	RGD
G	Mus81	MUS81 structure-specific endonuclease			ISO	1	208,126,545	208,131,820	RGD:1624291	RGD
G	Mus81	MUS81 structure-specific endonuclease			IEA	1	208,126,545	208,131,820	RGD:1600115	UniProtKB
G	Nabp1	nucleic acid binding protein 1			ISO	9	47,194,891	47,201,876	RGD:1624291	RGD
G	Nabp1	nucleic acid binding protein 1			ISS	9	47,194,891	47,201,876	RGD:1600115	UniProtKB
G	Nabp2	nucleic acid binding protein 2			ISO	7	1,693,100	1,698,698	RGD:1624291	RGD
G	Nabp2	nucleic acid binding protein 2			ISO	7	1,693,100	1,698,698	RGD:1624291	RGD
G	Nabp2	nucleic acid binding protein 2			ISS	7	1,693,100	1,698,698	RGD:1600115	UniProtKB
G	Neil1	nei endonuclease VIII-like 1 (E. coli)			ISO	8	60,898,923	60,904,767	RGD:1624291	RGD
G	Nono	non-POU domain containing, octamer-binding			IEA	X	89,502,318	89,520,178	RGD:1600115	UniProtKB
G	Npm1	nucleophosmin (nucleolar phosphoprotein B23, numatrin)			ISO	10	18,051,990	18,062,714	RGD:1624291	RGD
G	Npm1	nucleophosmin (nucleolar phosphoprotein B23, numatrin)			ISS	10	18,051,990	18,062,714	RGD:1600115	UniProtKB
G	Nsmce1	non-SMC element 1 homolog (S. cerevisiae)			IEA	1	184,528,343	184,553,824	RGD:1600115	UniProtKB
G	Nsmce4a	non-SMC element 4 homolog A (S. cerevisiae)			IEA	1	189,857,633	189,864,721	RGD:1600115	InterPro
G	Nudt1	nudix (nucleoside diphosphate linked moiety X)-type motif 1			IEA	12	14,775,536	14,778,845	RGD:1600115	InterPro
G	Ogg1	8-oxoguanine DNA glycosylase			TAS	4	149,209,745	149,219,081	RGD:628343	RGD
G	Ogg1	8-oxoguanine DNA glycosylase			ISO	4	149,209,745	149,219,081	RGD:1624291	RGD
G	Ogg1	8-oxoguanine DNA glycosylase			ISO	4	149,209,745	149,219,081	RGD:1624291	RGD
G	Ogg1	8-oxoguanine DNA glycosylase			ISO	4	149,209,745	149,219,081	RGD:1624291	RGD
G	Ogg1	8-oxoguanine DNA glycosylase			ISO	4	149,209,745	149,219,081	RGD:1624291	RGD
G	Otub1	OTU domain, ubiquitin aldehyde binding 1			IEA	1	209,871,581	209,879,518	RGD:1600115	UniProtKB
G	Parpbp	PARP1 binding protein			IEA	7	24,777,634	24,847,083	RGD:1600115	UniProtKB
G	Pms2	postmeiotic segregation increased 2 (S. cerevisiae)			ISO	12	11,004,507	11,028,754	RGD:1624291	RGD
G	Pnkp	polynucleotide kinase 3'-phosphatase			ISO	1	95,330,455	95,335,468	RGD:1624291	RGD
G	Pnkp	polynucleotide kinase 3'-phosphatase			IEA	1	95,330,455	95,335,468	RGD:1600115	ENSEMBL
G	Pola1	polymerase (DNA directed), alpha 1, catalytic subunit		NOT	ISO	X	80,650,454	80,965,833	RGD:1624291	RGD
G	Pola1	polymerase (DNA directed), alpha 1, catalytic subunit			ISS	X	80,650,454	80,965,833	RGD:1600115	UniProtKB
G	Polg2	polymerase (DNA directed), gamma 2, accessory subunit			IEA	10	96,120,205	96,130,221	RGD:1600115	InterPro
G	Poli	polymerase (DNA directed), iota			IEA	18	67,212,984	67,230,580	RGD:1600115	InterPro
G	Polk	polymerase (DNA directed) kappa			ISO	2	26,952,022	27,012,088	RGD:1624291	RGD
G	Polm	polymerase (DNA directed), mu			IEA	14	86,491,716	86,501,294	RGD:1600115	InterPro
G	Polq	polymerase (DNA directed), theta			ISO	11	65,474,661	65,577,382	RGD:1624291	RGD
G	Polq	polymerase (DNA directed), theta			ISO	11	65,474,661	65,577,382	RGD:1624291	RGD
G	Polq	polymerase (DNA directed), theta			IEA	11	65,474,661	65,577,382	RGD:1600115	ENSEMBL
G	Prpf19	PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)			IEA	1	213,390,564	213,401,943	RGD:1600115	UniProtKB
G	Pttg1	pituitary tumor-transforming 1			IEA	10	28,527,409	28,532,831	RGD:1600115	UniProtKB
G	Rad1	RAD1 homolog (S. pombe)			IEA	2	59,837,934	59,845,973	RGD:1600115	InterPro
G	Rad17	RAD17 homolog (S. pombe)			IEA	2	31,424,504	31,454,313	RGD:1600115	InterPro
G	Rad18	RAD18 homolog (S. cerevisiae)			IEA	4	148,452,664	148,543,743	RGD:1600115	InterPro
G	Rad50	RAD50 homolog (S. cerevisiae)			ISO	10	39,112,733	39,164,694	RGD:1624291	RGD
G	Rad50	RAD50 homolog (S. cerevisiae)			ISS	10	39,112,733	39,164,694	RGD:1600115	UniProtKB
G	Rad51ap1	RAD51 associated protein 1			IEA	4	163,308,788	163,321,854	RGD:1600115	InterPro
G	Rad51c	Rad51 homolog c (S. cerevisiae)			ISO	10	75,692,205	75,718,369	RGD:1624291	RGD
G	Rad51c	Rad51 homolog c (S. cerevisiae)			IEA	10	75,692,205	75,718,369	RGD:1600115	ENSEMBL
G	Rad52	RAD52 homolog (S. cerevisiae)			IEA	4	156,281,973	156,295,238	RGD:1600115	InterPro
G	Rad9a	RAD9 homolog A (S. pombe)			IEA	1	206,778,534	206,785,230	RGD:1600115	InterPro
G	Rad9b	RAD9 homolog B (S. pombe)			IEA	12	35,412,463	35,443,713	RGD:1600115	InterPro
G	Rdm1	RAD52 motif 1			IEA	10	90,659,199	90,669,362	RGD:1600115	InterPro
G	Recql	RecQ protein-like (DNA helicase Q1-like)			IEA	4	179,927,255	179,951,742	RGD:1600115	InterPro
G	Rev3l	REV3-like, polymerase (DNA directed), zeta, catalytic subunit			ISO	20	43,870,509	44,042,379	RGD:1624291	RGD
G	RGD1564719	similar to RIKEN cDNA C230052I12			IEA	1	87,917,502	87,923,706	RGD:1600115	InterPro
G	Rpain	RPA interacting protein			ISO	10	57,874,557	57,881,526	RGD:1624291	RGD
G	Rpain	RPA interacting protein			IEA	10	57,874,557	57,881,526	RGD:1600115	ENSEMBL
G	Rps27l	ribosomal protein S27-like			IEA				RGD:1600115	ENSEMBL
G	Rps27l	ribosomal protein S27-like			ISO				RGD:1624291	RGD
G	Rrm2b	ribonucleotide reductase M2 B (TP53 inducible)			ISO	7	73,432,161	73,459,541	RGD:1624291	RGD
G	Rtel1	regulator of telomere elongation helicase 1			IEA	3	170,461,613	170,496,959	RGD:1600115	UniProtKB
G	Ruvbl1	RuvB-like 1 (E. coli)			IEA	4	122,556,857	122,591,769	RGD:1600115	UniProtKB
G	Ruvbl2	RuvB-like 2 (E. coli)			IEA	1	95,894,029	95,906,885	RGD:1600115	InterPro
G	Slx1b	SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)			ISO	1	185,843,372	185,848,919	RGD:1624291	RGD
G	Slx1b	SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)			ISO	1	185,843,372	185,848,919	RGD:1624291	RGD
G	Slx1b	SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)			ISO	1	185,843,372	185,848,919	RGD:1624291	RGD
G	Slx1b	SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)			ISO	1	185,843,372	185,848,919	RGD:1624291	RGD
G	Slx1b	SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)			IEA	1	185,843,372	185,848,919	RGD:1600115	UniProtKB
G	Slx4	SLX4 structure-specific endonuclease subunit			IEA	10	11,778,216	11,816,839	RGD:1600115	InterPro
G	Slx4	SLX4 structure-specific endonuclease subunit			ISO	10	11,778,216	11,816,839	RGD:1624291	RGD
G	Smc1a	structural maintenance of chromosomes 1A			IEA	X	41,503,393	41,547,830	RGD:1600115	InterPro
G	Smc1a	structural maintenance of chromosomes 1A			IEA	X	41,503,393	41,547,830	RGD:1600115	UniProtKB
G	Smc1b	structural maintenance of chromosomes 1B			IEA	7	123,078,896	123,140,078	RGD:1600115	InterPro
G	Smc2	structural maintenance of chromosomes 2			IEA	5	69,561,142	69,607,373	RGD:1600115	InterPro
G	Smc3	structural maintenance of chromosomes 3			IEA	1	259,822,480	259,865,602	RGD:1600115	UniProtKB
G	Smc4	structural maintenance of chromosomes 4			IEA	2	158,987,318	159,015,705	RGD:1600115	InterPro
G	Smug1	single-strand-selective monofunctional uracil-DNA glycosylase 1			IDA	7	142,064,428	142,066,553	RGD:2317001	RGD
G	Ssrp1	structure specific recognition protein 1			IEA	3	68,272,947	68,282,596	RGD:1600115	UniProtKB
G	Taok1	TAO kinase 1			IEA	10	66,503,966	66,584,625	RGD:1600115	UniProtKB
G	Taok3	TAO kinase 3			IEA	12	40,502,499	40,583,816	RGD:1600115	UniProtKB
G	Tdp1	tyrosyl-DNA phosphodiesterase 1			ISO	6	124,095,259	124,162,815	RGD:1624291	RGD
G	Tdp1	tyrosyl-DNA phosphodiesterase 1			ISO	6	124,095,259	124,162,815	RGD:1624291	RGD
G	Tfpt	TCF3 (E2A) fusion partner			IEA	1	63,901,368	63,910,301	RGD:1600115	UniProtKB
G	Tnfaip1	tumor necrosis factor, alpha-induced protein 1 (endothelial)			TAS	10	64,632,189	64,646,879	RGD:1357162	UniProtKB
G	Tp53bp1	tumor protein p53 binding protein 1			ISO	3	107,994,425	108,071,133	RGD:1624291	RGD
G	Tp53bp1	tumor protein p53 binding protein 1			IEA	3	107,994,425	108,071,133	RGD:1600115	ENSEMBL
G	Trim28	tripartite motif-containing 28			ISO	1	72,892,399	72,899,070	RGD:1624291	RGD
G	Trim28	tripartite motif-containing 28			IEA	1	72,892,399	72,899,070	RGD:1600115	ENSEMBL
G	Trip12	thyroid hormone receptor interactor 12			IEA	9	83,961,411	84,085,077	RGD:1600115	UniProtKB
G	Ttc5	tetratricopeptide repeat domain 5			IEA	15	26,749,259	26,766,848	RGD:1600115	UniProtKB
G	Ube2a	ubiquitin-conjugating enzyme E2A			ISO	X	7,981,683	7,992,372	RGD:1624291	RGD
G	Ube2a	ubiquitin-conjugating enzyme E2A			IEA	X	7,981,683	7,992,372	RGD:1600115	ENSEMBL
G	Ube2b	ubiquitin-conjugating enzyme E2B			ISO	10	37,509,322	37,523,900	RGD:1624291	RGD
G	Ube2d3	ubiquitin-conjugating enzyme E2D 3			IEA	2	232,943,214	232,971,022	RGD:1600115	UniProtKB
G	Ube2n	ubiquitin-conjugating enzyme E2N			IEA	7	32,719,959	32,750,002	RGD:1600115	UniProtKB
G	Ube2t	ubiquitin-conjugating enzyme E2T (putative)			IEA	13	47,924,340	47,934,842	RGD:1600115	ENSEMBL
G	Ube2t	ubiquitin-conjugating enzyme E2T (putative)			ISO	13	47,924,340	47,934,842	RGD:1624291	RGD
G	Ubr5	ubiquitin protein ligase E3 component n-recognin 5			IEA	7	73,467,676	73,545,246	RGD:1600115	UniProtKB
G	Uhrf1	ubiquitin-like with PHD and ring finger domains 1			IEA				RGD:1600115	UniProtKB
G	Ung	uracil-DNA glycosylase			TAS	12	43,520,629	43,528,873	RGD:634481	RGD
G	Usp1	ubiquitin specific peptidase 1			IEA	5	119,364,515	119,375,885	RGD:1600115	UniProtKB
G	Usp10	ubiquitin specific peptidase 10			IEA	19	50,202,951	50,244,677	RGD:1600115	UniProtKB
G	Usp28	ubiquitin specific peptidase 28			IEA	8	52,245,642	52,305,922	RGD:1600115	UniProtKB
G	Usp3	ubiquitin specific peptidase 3			IEA	8	70,821,429	70,897,119	RGD:1600115	ENSEMBL
G	Usp3	ubiquitin specific peptidase 3			ISO	8	70,821,429	70,897,119	RGD:1624291	RGD
G	Wrn	Werner syndrome, RecQ helicase-like			IEA	16	62,535,144	62,668,700	RGD:1600115	InterPro
G	Xpa	xeroderma pigmentosum, complementation group A			ISO	5	62,706,719	62,750,771	RGD:1624291	RGD
G	Xpa	xeroderma pigmentosum, complementation group A			ISO	5	62,706,719	62,750,771	RGD:1624291	RGD
G	Xpc	xeroderma pigmentosum, complementation group C			ISO	4	125,672,674	125,699,925	RGD:1624291	RGD
G	Xrcc1	X-ray repair complementing defective repair in Chinese hamster cells 1			ISO	1	79,834,167	79,860,300	RGD:1624291	RGD
G	Xrcc2	X-ray repair complementing defective repair in Chinese hamster cells 2			ISO	4	4,817,222	4,835,725	RGD:1624291	RGD
G	Xrcc3	X-ray repair complementing defective repair in Chinese hamster cells 3			ISO	6	136,594,276	136,602,069	RGD:1624291	RGD
G	Xrcc3	X-ray repair complementing defective repair in Chinese hamster cells 3			IEA	6	136,594,276	136,602,069	RGD:1600115	ENSEMBL
G	Zranb3	zinc finger, RAN-binding domain containing 3			ISO	13	40,648,221	40,803,738	RGD:1624291	RGD
DNA replication
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Adra2a	adrenoceptor alpha 2A			IMP				RGD:1625185	RGD
G	Brca1	breast cancer 1, early onset			ISO	10	90,513,630	90,572,676	RGD:1624291	RGD
G	Brca1	breast cancer 1, early onset			IEA	10	90,513,630	90,572,676	RGD:1600115	ENSEMBL
G	Btc	betacellulin			TAS	14	18,194,470	18,235,228	RGD:1357906	RGD
G	Chtf18	CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae)			IEA	10	14,988,146	14,996,182	RGD:1600115	InterPro
G	Chtf8	CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)			IEA	19	36,731,970	36,734,444	RGD:1600115	UniProtKB
G	Ctgf	connective tissue growth factor			IEA	1	21,327,099	21,330,215	RGD:1600115	UniProtKB
G	Dna2	DNA replication helicase/nuclease 2			ISS	20	25,288,326	25,316,851	RGD:1600115	UniProtKB
G	Dna2	DNA replication helicase/nuclease 2			ISO	20	25,288,326	25,316,851	RGD:1624291	RGD
G	Dnajc2	DnaJ (Hsp40) homolog, subfamily C, member 2			ISO	4	8,719,916	8,746,752	RGD:1624291	RGD
G	Dnajc2	DnaJ (Hsp40) homolog, subfamily C, member 2			IEA	4	8,719,916	8,746,752	RGD:1600115	ENSEMBL
G	E4f1	E4F transcription factor 1			ISO	10	13,701,558	13,713,008	RGD:1624291	RGD
G	E4f1	E4F transcription factor 1			IEA	10	13,701,558	13,713,008	RGD:1600115	ENSEMBL
G	Fen1	flap structure-specific endonuclease 1			ISO	1	212,688,118	212,692,486	RGD:1624291	RGD
G	Fhit	fragile histidine triad			ISO	15	15,823,461	17,329,184	RGD:1624291	RGD
G	Fhit	fragile histidine triad			IEA	15	15,823,461	17,329,184	RGD:1600115	ENSEMBL
G	Gins1	GINS complex subunit 1 (Psf1 homolog)			ISO	3	141,535,210	141,557,391	RGD:1624291	RGD
G	Gins1	GINS complex subunit 1 (Psf1 homolog)			IEA	3	141,535,210	141,557,391	RGD:1600115	ENSEMBL
G	Gins2	GINS complex subunit 2 (Psf2 homolog)			IEA	19	50,915,108	50,927,668	RGD:1600115	UniProtKB
G	Gins3	GINS complex subunit 3 (Psf3 homolog)			IEA	19	9,876,690	9,885,226	RGD:1600115	UniProtKB
G	Gins4	GINS complex subunit 4 (Sld5 homolog)			IEA	16	73,245,883	73,257,267	RGD:1600115	UniProtKB
G	Gmnc	geminin coiled-coil domain containing			ISO	11	75,823,385	75,835,294	RGD:1624291	RGD
G	Gmnc	geminin coiled-coil domain containing			IEA	11	75,823,385	75,835,294	RGD:1600115	ENSEMBL
G	Helb	helicase (DNA) B			ISO	7	59,311,833	59,338,961	RGD:1624291	RGD
G	Ing4	inhibitor of growth family, member 4			IEA	4	161,161,044	161,169,603	RGD:1600115	ENSEMBL
G	Ing4	inhibitor of growth family, member 4			ISO	4	161,161,044	161,169,603	RGD:1624291	RGD
G	Ino80e	INO80 complex subunit E			IEA	1	186,030,837	186,041,424	RGD:1600115	InterPro
G	Kat7	K (lysine) acetyltransferase 7			ISO	10	83,960,245	83,995,124	RGD:1624291	RGD
G	Kat7	K (lysine) acetyltransferase 7			ISS	10	83,960,245	83,995,124	RGD:1600115	UniProtKB
G	Kctd13	potassium channel tetramerisation domain containing 13			IDA	1	186,104,306	186,122,853	RGD:1357162	UniProtKB
G	Kin	antigenic determinant of rec-A protein homolog (mouse)			ISO	17	79,728,511	79,738,856	RGD:1624291	RGD
G	Kin	antigenic determinant of rec-A protein homolog (mouse)			ISO	17	79,728,511	79,738,856	RGD:1624291	RGD
G	Kin	antigenic determinant of rec-A protein homolog (mouse)			IEA	17	79,728,511	79,738,856	RGD:1600115	ENSEMBL
G	Kin	antigenic determinant of rec-A protein homolog (mouse)			IEA	17	79,728,511	79,738,856	RGD:1600115	ENSEMBL
G	Krt7	keratin 7			IEA	7	140,160,829	140,226,474	RGD:1600115	ENSEMBL
G	Lig1	ligase I, DNA, ATP-dependent			ISO	1	73,728,892	73,767,429	RGD:1624291	RGD
G	Lig1	ligase I, DNA, ATP-dependent			IEA	1	73,728,892	73,767,429	RGD:1600115	UniProtKB
G	LOC100911727	DNA ligase 1-like			IEA				RGD:1600115	UniProtKB
G	LOC367042	similar to Activator 1 37 kDa subunit (Replication factor C 37 kDa subunit) (A1 37 kDa subunit) (RF-C 37 kDa subunit) (RFC37)			IEA	8	22,551,513	22,552,593	RGD:1600115	InterPro
G	LOC684558	similar to regulator of nonsense transcripts 1			IEA				RGD:1600115	ENSEMBL
G	Mcm10	minichromosome maintenance complex component 10			IEA	17	84,354,481	84,375,749	RGD:1600115	InterPro
G	Mcm7	minichromosome maintenance complex component 7			TAS	12	17,607,250	17,614,508	RGD:1304505	RGD
G	Mcm8	minichromosome maintenance complex component 8			IEA	3	120,614,429	120,644,673	RGD:1600115	UniProtKB
G	Mcmdc1	minichromosome maintenance deficient domain containing 1			ISS				RGD:1600115	UniProtKB
G	Mcmdc2	minichromosome maintenance domain containing 2			IEA	5	8,842,432	8,881,827	RGD:1600115	InterPro
G	Med1	mediator complex subunit 1			ISO	10	86,917,525	86,959,080	RGD:1624291	RGD
G	Med1	mediator complex subunit 1			IEA	10	86,917,525	86,959,080	RGD:1600115	ENSEMBL
G	Nae1	NEDD8 activating enzyme E1 subunit 1			ISO	19	382,556	408,667	RGD:1624291	RGD
G	Nasp	nuclear autoantigenic sperm protein (histone-binding)			ISO	5	136,884,705	136,910,192	RGD:1624291	RGD
G	Nasp	nuclear autoantigenic sperm protein (histone-binding)			ISS	5	136,884,705	136,910,192	RGD:1600115	UniProtKB
G	Nfia	nuclear factor I/A			IEA	5	118,152,938	118,507,056	RGD:1600115	InterPro
G	Nfia	nuclear factor I/A			IEA	5	118,152,938	118,507,056	RGD:1600115	UniProtKB
G	Nfib	nuclear factor I/B			IEA	5	101,184,253	101,409,907	RGD:1600115	UniProtKB
G	Nfic	nuclear factor I/C			IEA	7	9,768,135	9,793,584	RGD:1600115	UniProtKB
G	Nfix	nuclear factor I/X (CCAAT-binding transcription factor)			IEA	19	25,018,352	25,111,367	RGD:1600115	UniProtKB
G	Nol8	nucleolar protein 8			ISO	17	20,945,380	20,968,740	RGD:1624291	RGD
G	Ns5atp9	NS5A (hepatitis C virus) transactivated protein 9			ISO	8	70,159,283	70,172,116	RGD:1624291	RGD
G	Ns5atp9	NS5A (hepatitis C virus) transactivated protein 9			ISS	8	70,159,283	70,172,116	RGD:1600115	UniProtKB
G	Nup98	nucleoporin 98			ISO	1	159,598,048	159,696,720	RGD:1624291	RGD
G	Nup98	nucleoporin 98			IEA	1	159,598,048	159,696,720	RGD:1600115	ENSEMBL
G	Orc1	origin recognition complex, subunit 1			IEA	5	129,881,973	129,901,675	RGD:1600115	InterPro
G	Orc1	origin recognition complex, subunit 1			IEA	5	129,881,973	129,901,675	RGD:1600115	UniProtKB
G	Orc2	origin recognition complex, subunit 2			IEA	9	57,125,684	57,155,508	RGD:1600115	UniProtKB
G	Orc3	origin recognition complex, subunit 3			IEA	5	51,172,243	51,226,644	RGD:1600115	InterPro
G	Orc3	origin recognition complex, subunit 3			IEA	5	51,172,243	51,226,644	RGD:1600115	UniProtKB
G	Orc5	origin recognition complex, subunit 5			IEA	4	7,957,156	8,025,958	RGD:1600115	InterPro
G	Pcna	proliferating cell nuclear antigen			IEA	3	120,008,715	120,012,589	RGD:1600115	UniProtKB
G	Pdgfb	platelet-derived growth factor beta polypeptide			IEP	7	118,244,385	118,262,021	RGD:1581760	RGD
G	Phb	prohibitin			IEA				RGD:1600115	UniProtKB
G	Pola1	polymerase (DNA directed), alpha 1, catalytic subunit			IMP	X	80,650,454	80,965,833	RGD:1580606	RGD
G	Pola1	polymerase (DNA directed), alpha 1, catalytic subunit			ISO	X	80,650,454	80,965,833	RGD:1624291	RGD
G	Pola1	polymerase (DNA directed), alpha 1, catalytic subunit			ISO	X	80,650,454	80,965,833	RGD:1624291	RGD
G	Pola1	polymerase (DNA directed), alpha 1, catalytic subunit			ISO	X	80,650,454	80,965,833	RGD:1624291	RGD
G	Pola1	polymerase (DNA directed), alpha 1, catalytic subunit			IMP	X	80,650,454	80,965,833	RGD:2307013	RGD
G	Pola1	polymerase (DNA directed), alpha 1, catalytic subunit			ISO	X	80,650,454	80,965,833	RGD:1624291	RGD
G	Pola1	polymerase (DNA directed), alpha 1, catalytic subunit			ISO	X	80,650,454	80,965,833	RGD:1624291	RGD
G	Pola1	polymerase (DNA directed), alpha 1, catalytic subunit			ISO	X	80,650,454	80,965,833	RGD:1624291	RGD
G	Pola1	polymerase (DNA directed), alpha 1, catalytic subunit			IEA	X	80,650,454	80,965,833	RGD:1600115	UniProtKB
G	Pola1	polymerase (DNA directed), alpha 1, catalytic subunit			ISS	X	80,650,454	80,965,833	RGD:1600115	UniProtKB
G	Pola2	polymerase (DNA directed), alpha 2, accessory subunit			TAS	1	208,573,153	208,597,195	RGD:633584	RGD
G	Pola2	polymerase (DNA directed), alpha 2, accessory subunit			ISO	1	208,573,153	208,597,195	RGD:1624291	RGD
G	Pola2	polymerase (DNA directed), alpha 2, accessory subunit			IMP	1	208,573,153	208,597,195	RGD:2307013	RGD
G	Pola2	polymerase (DNA directed), alpha 2, accessory subunit			IEA	1	208,573,153	208,597,195	RGD:1600115	ENSEMBL
G	Polb	polymerase (DNA directed), beta			IEA	16	73,864,702	73,888,011	RGD:1600115	UniProtKB
G	Polb	polymerase (DNA directed), beta			IEA	16	73,864,702	73,888,011	RGD:1600115	UniProtKB
G	Pold1	polymerase (DNA directed), delta 1, catalytic subunit			ISO	1	95,010,719	95,021,686	RGD:1624291	RGD
G	Pole	polymerase (DNA directed), epsilon, catalytic subunit			IEA	12	46,491,498	46,539,988	RGD:1600115	UniProtKB
G	Pole	polymerase (DNA directed), epsilon, catalytic subunit			ISO	12	46,491,498	46,539,988	RGD:1624291	RGD
G	Polg2	polymerase (DNA directed), gamma 2, accessory subunit			IEA	10	96,120,205	96,130,221	RGD:1600115	InterPro
G	Poll	polymerase (DNA directed), lambda			IEA	1	250,718,414	250,726,874	RGD:1600115	UniProtKB
G	Poll	polymerase (DNA directed), lambda			IEA	1	250,718,414	250,726,874	RGD:1600115	UniProtKB
G	Polq	polymerase (DNA directed), theta			IEA	11	65,474,661	65,577,382	RGD:1600115	InterPro
G	Prim1	DNA primase, p49 subunit			NAS	7	1,293,137	1,323,029	RGD:724584	RGD
G	Prim2	primase, DNA, polypeptide 2			NAS	9	32,206,274	32,424,970	RGD:633584	RGD
G	Rbbp7	retinoblastoma binding protein 7			IEA	X	52,669,703	52,688,332	RGD:1600115	UniProtKB
G	Rbms1	RNA binding motif, single stranded interacting protein 1			IEA	3	42,438,537	42,663,729	RGD:1600115	UniProtKB
G	Recql	RecQ protein-like (DNA helicase Q1-like)			IEA	4	179,927,255	179,951,742	RGD:1600115	InterPro
G	Recql4	RecQ protein-like 4			ISO	7	114,752,863	114,760,027	RGD:1624291	RGD
G	Repin1	replication initiator 1			IEA	4	76,688,429	76,690,141	RGD:1600115	UniProtKB
G	Rev3l	REV3-like, polymerase (DNA directed), zeta, catalytic subunit			IEA	20	43,870,509	44,042,379	RGD:1600115	UniProtKB
G	Rfc1	replication factor C (activator 1) 1			IEA	14	45,665,717	45,741,391	RGD:1600115	InterPro
G	Rfc2	replication factor C (activator 1) 2			IEA	12	23,185,550	23,198,655	RGD:1600115	UniProtKB
G	Rfc3	replication factor C (activator 1) 3			ISO	12	3,224,493	3,235,256	RGD:1624291	RGD
G	Rfc3	replication factor C (activator 1) 3			IEA	12	3,224,493	3,235,256	RGD:1600115	ENSEMBL
G	Rfc4	replication factor C (activator 1) 4			IEA	11	79,935,273	79,950,589	RGD:1600115	InterPro
G	Rfc5	replication factor C (activator 1) 5			IEA	12	40,395,942	40,405,498	RGD:1600115	InterPro
G	RGD1560557	similar to minichromosome maintenance protein 8 isoform 1			IEA	20	32,217,045	32,300,032	RGD:1600115	InterPro
G	Rpa1	replication protein A1			IC	10	62,613,169	62,656,565	RGD:2307013	RGD
G	Rpa2	replication protein A2			IC	5	152,369,550	152,380,370	RGD:2307013	RGD
G	Rpa3	replication protein A3			IC	4	33,304,334	33,307,365	RGD:2307013	RGD
G	Rrm1	ribonucleotide reductase M1			IEA	1	159,930,994	159,937,860	RGD:1600115	UniPathway
G	Rrm2	ribonucleotide reductase M2			IEA	6	42,350,541	42,356,748	RGD:1600115	UniPathway
G	Sin3a	SIN3 transcription regulator homolog A (yeast)			IEA	8	60,832,595	60,884,764	RGD:1600115	ENSEMBL
G	Sin3a	SIN3 transcription regulator homolog A (yeast)			ISO	8	60,832,595	60,884,764	RGD:1624291	RGD
G	Slx4	SLX4 structure-specific endonuclease subunit			IEA	10	11,778,216	11,816,839	RGD:1600115	InterPro
G	Ssbp1	single-stranded DNA binding protein 1, mitochondrial			IEA	4	68,027,304	68,036,581	RGD:1600115	InterPro
G	Ssbp1	single-stranded DNA binding protein 1, mitochondrial			IEA	4	68,027,304	68,036,581	RGD:1600115	UniProtKB
G	Ssrp1	structure specific recognition protein 1			IEA	3	68,272,947	68,282,596	RGD:1600115	UniProtKB
G	Tbrg1	transforming growth factor beta regulator 1			ISO	8	38,890,730	38,898,388	RGD:1624291	RGD
G	Ticrr	TOPBP1-interacting checkpoint and replication regulator			IEA	1	135,428,695	135,471,349	RGD:1600115	InterPro
G	Tk1	thymidine kinase 1, soluble			IEA				RGD:1600115	UniProtKB
G	Tnfaip1	tumor necrosis factor, alpha-induced protein 1 (endothelial)			IDA	10	64,632,189	64,646,879	RGD:1357162	UniProtKB
G	Top1	topoisomerase (DNA) I			ISO	3	151,428,931	151,512,884	RGD:1624291	RGD
G	Top1	topoisomerase (DNA) I			IBA	3	151,428,931	151,512,884	RGD:1600115	RefGenome
G	Top1mt	topoisomerase (DNA) I, mitochondrial			IBA	7	113,596,083	113,619,109	RGD:1600115	RefGenome
G	Wrn	Werner syndrome, RecQ helicase-like			ISO	16	62,535,144	62,668,700	RGD:1624291	RGD
G	Wrn	Werner syndrome, RecQ helicase-like			ISO	16	62,535,144	62,668,700	RGD:1624291	RGD
G	Wrn	Werner syndrome, RecQ helicase-like			IEA	16	62,535,144	62,668,700	RGD:1600115	InterPro
G	Wrnip1	Werner helicase interacting protein 1			IEA	17	37,982,094	38,002,342	RGD:1600115	UniProtKB
DNA replication initiation
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Ccne1	cyclin E1			ISO	1	90,568,189	90,577,426	RGD:1624291	RGD
G	Ccne1	cyclin E1			IEA	1	90,568,189	90,577,426	RGD:1600115	ENSEMBL
G	Ccne2	cyclin E2			ISO	5	25,032,748	25,044,509	RGD:1624291	RGD
G	Ccne2	cyclin E2			IEA	5	25,032,748	25,044,509	RGD:1600115	ENSEMBL
G	Cdc45	cell division cycle 45			IEA				RGD:1600115	InterPro
G	Mcm2	minichromosome maintenance complex component 2			IEA	4	122,977,522	122,991,934	RGD:1600115	InterPro
G	Mcm2	minichromosome maintenance complex component 2			ISO	4	122,977,522	122,991,934	RGD:1624291	RGD
G	Mcm3	minichromosome maintenance complex component 3			IEA	9	19,536,922	19,554,871	RGD:1600115	InterPro
G	Mcm4	minichromosome maintenance complex component 4			IEA	11	87,169,742	87,183,443	RGD:1600115	InterPro
G	Mcm5	minichromosome maintenance complex component 5			IEA	19	13,978,940	14,000,641	RGD:1600115	InterPro
G	Mcm6	minichromosome maintenance complex component 6			IEA	13	41,045,677	41,070,868	RGD:1600115	InterPro
G	Mcm7	minichromosome maintenance complex component 7			IEA	12	17,607,250	17,614,508	RGD:1600115	InterPro
G	Orc4	origin recognition complex, subunit 4			ISO	3	29,813,264	29,851,852	RGD:1624291	RGD
G	Orc4	origin recognition complex, subunit 4			ISS	3	29,813,264	29,851,852	RGD:1600115	UniProtKB
G	Pola1	polymerase (DNA directed), alpha 1, catalytic subunit			ISS	X	80,650,454	80,965,833	RGD:1600115	UniProtKB
G	Pola1	polymerase (DNA directed), alpha 1, catalytic subunit			ISO	X	80,650,454	80,965,833	RGD:1624291	RGD
DNA replication proofreading
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Pold1	polymerase (DNA directed), delta 1, catalytic subunit			ISO	1	95,010,719	95,021,686	RGD:1624291	RGD
G	Pold1	polymerase (DNA directed), delta 1, catalytic subunit			IEA	1	95,010,719	95,021,686	RGD:1600115	ENSEMBL
G	Pold1	polymerase (DNA directed), delta 1, catalytic subunit			IBA	1	95,010,719	95,021,686	RGD:1600115	RefGenome
G	RGD1561931	similar to KIAA2022 protein			IBA	X	92,073,589	92,081,623	RGD:1600115	RefGenome
DNA replication, Okazaki fragment processing
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Dna2	DNA replication helicase/nuclease 2			ISS	20	25,288,326	25,316,851	RGD:1600115	UniProtKB
G	Dna2	DNA replication helicase/nuclease 2			ISO	20	25,288,326	25,316,851	RGD:1624291	RGD
DNA replication, removal of RNA primer
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Dna2	DNA replication helicase/nuclease 2			IEA	20	25,288,326	25,316,851	RGD:1600115	ENSEMBL
G	Dna2	DNA replication helicase/nuclease 2			ISO	20	25,288,326	25,316,851	RGD:1624291	RGD
G	Fen1	flap structure-specific endonuclease 1			ISO	1	212,688,118	212,692,486	RGD:1624291	RGD
G	Fen1	flap structure-specific endonuclease 1			IEA	1	212,688,118	212,692,486	RGD:1600115	UniProtKB
G	Pold1	polymerase (DNA directed), delta 1, catalytic subunit			IBA	1	95,010,719	95,021,686	RGD:1600115	RefGenome
G	RGD1561931	similar to KIAA2022 protein			IBA	X	92,073,589	92,081,623	RGD:1600115	RefGenome
DNA replication, synthesis of RNA primer
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Helb	helicase (DNA) B			IEA	7	59,311,833	59,338,961	RGD:1600115	InterPro
G	Helb	helicase (DNA) B			ISO	7	59,311,833	59,338,961	RGD:1624291	RGD
G	Pola1	polymerase (DNA directed), alpha 1, catalytic subunit			ISO	X	80,650,454	80,965,833	RGD:1624291	RGD
G	Pola1	polymerase (DNA directed), alpha 1, catalytic subunit			ISS	X	80,650,454	80,965,833	RGD:1600115	GOC
DNA strand elongation involved in DNA replication
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Pola1	polymerase (DNA directed), alpha 1, catalytic subunit			ISO	X	80,650,454	80,965,833	RGD:1624291	RGD
G	Pola1	polymerase (DNA directed), alpha 1, catalytic subunit			ISS	X	80,650,454	80,965,833	RGD:1600115	UniProtKB
DNA strand renaturation
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Blm	Bloom syndrome, RecQ helicase-like			ISO	1	136,271,573	136,358,077	RGD:1624291	RGD
G	Rad54l	RAD54 like (S. cerevisiae)			ISO				RGD:1624291	RGD
G	Recql	RecQ protein-like (DNA helicase Q1-like)			ISO	4	179,927,255	179,951,742	RGD:1624291	RGD
G	Recql	RecQ protein-like (DNA helicase Q1-like)			IEA	4	179,927,255	179,951,742	RGD:1600115	ENSEMBL
G	Recql4	RecQ protein-like 4			ISO	7	114,752,863	114,760,027	RGD:1624291	RGD
G	Smarca1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1			ISO	X	134,177,345	134,249,029	RGD:1624291	RGD
G	Smarcal1	Swi/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1			ISS	9	71,780,870	71,827,780	RGD:1600115	GOC
G	Smarcal1	Swi/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1			ISO	9	71,780,870	71,827,780	RGD:1624291	RGD
G	Smarcal1	Swi/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1			ISO	9	71,780,870	71,827,780	RGD:1624291	RGD
G	Tp53	tumor protein p53			ISS	10	56,399,721	56,411,150	RGD:1600115	UniProtKB
G	Tp53	tumor protein p53			ISO	10	56,399,721	56,411,150	RGD:1624291	RGD
G	Zranb3	zinc finger, RAN-binding domain containing 3			ISO	13	40,648,221	40,803,738	RGD:1624291	RGD
G	Zranb3	zinc finger, RAN-binding domain containing 3			ISO	13	40,648,221	40,803,738	RGD:1624291	RGD
G	Zranb3	zinc finger, RAN-binding domain containing 3			ISO	13	40,648,221	40,803,738	RGD:1624291	RGD
DNA synthesis involved in DNA repair
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Pola1	polymerase (DNA directed), alpha 1, catalytic subunit		NOT	ISO	X	80,650,454	80,965,833	RGD:1624291	RGD
G	Pola1	polymerase (DNA directed), alpha 1, catalytic subunit		NOT	ISO	X	80,650,454	80,965,833	RGD:1624291	RGD
G	Pola1	polymerase (DNA directed), alpha 1, catalytic subunit			ISS	X	80,650,454	80,965,833	RGD:1600115	UniProtKB
G	Pold1	polymerase (DNA directed), delta 1, catalytic subunit			ISO	1	95,010,719	95,021,686	RGD:1624291	RGD
G	Pold1	polymerase (DNA directed), delta 1, catalytic subunit			ISO	1	95,010,719	95,021,686	RGD:1624291	RGD
G	Pold1	polymerase (DNA directed), delta 1, catalytic subunit			IEA	1	95,010,719	95,021,686	RGD:1600115	ENSEMBL
G	Pole	polymerase (DNA directed), epsilon, catalytic subunit			IEA	12	46,491,498	46,539,988	RGD:1600115	ENSEMBL
G	Pole	polymerase (DNA directed), epsilon, catalytic subunit			ISO	12	46,491,498	46,539,988	RGD:1624291	RGD
G	Polh	polymerase (DNA directed), eta			IEA	9	10,341,975	10,375,983	RGD:1600115	ENSEMBL
G	Polh	polymerase (DNA directed), eta			ISO	9	10,341,975	10,375,983	RGD:1624291	RGD
G	Sirt1	sirtuin 1			ISO	20	25,675,302	25,686,494	RGD:1624291	RGD
G	Sirt1	sirtuin 1			IEA	20	25,675,302	25,686,494	RGD:1600115	ENSEMBL
G	Wrn	Werner syndrome, RecQ helicase-like			ISO	16	62,535,144	62,668,700	RGD:1624291	RGD
G	Wrnip1	Werner helicase interacting protein 1			ISO	17	37,982,094	38,002,342	RGD:1624291	RGD
G	Wrnip1	Werner helicase interacting protein 1			ISS	17	37,982,094	38,002,342	RGD:1600115	UniProtKB
DNA unwinding involved in replication
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	LOC100911267	DNA repair protein RAD51 homolog 1-like			IEA				RGD:1600115	ENSEMBL
G	Mcm2	minichromosome maintenance complex component 2			ISO	4	122,977,522	122,991,934	RGD:1624291	RGD
G	Mcm2	minichromosome maintenance complex component 2			IEA	4	122,977,522	122,991,934	RGD:1600115	ENSEMBL
G	Mcm4	minichromosome maintenance complex component 4			ISO	11	87,169,742	87,183,443	RGD:1624291	RGD
G	Mcm4	minichromosome maintenance complex component 4			IEA	11	87,169,742	87,183,443	RGD:1600115	ENSEMBL
G	Mcm6	minichromosome maintenance complex component 6			IEA	13	41,045,677	41,070,868	RGD:1600115	ENSEMBL
G	Mcm6	minichromosome maintenance complex component 6			ISO	13	41,045,677	41,070,868	RGD:1624291	RGD
G	Mcm7	minichromosome maintenance complex component 7			ISO	12	17,607,250	17,614,508	RGD:1624291	RGD
G	Mcm7	minichromosome maintenance complex component 7			IEA	12	17,607,250	17,614,508	RGD:1600115	ENSEMBL
G	Peo1	progressive external ophthalmoplegia 1			IEA	1	250,073,350	250,079,743	RGD:1600115	ENSEMBL
G	Peo1	progressive external ophthalmoplegia 1			ISO	1	250,073,350	250,079,743	RGD:1624291	RGD
G	Pura	purine rich element binding protein A			ISO	18	28,916,722	28,925,008	RGD:1624291	RGD
G	Pura	purine rich element binding protein A			IEA	18	28,916,722	28,925,008	RGD:1600115	ENSEMBL
G	Rad51	RAD51 homolog (S. cerevisiae)			ISO	3	105,625,265	105,650,392	RGD:1624291	RGD
DNA-dependent DNA replication
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Baz1a	bromodomain adjacent to zinc finger domain, 1A			ISO	6	75,239,089	75,327,488	RGD:1624291	RGD
G	Helb	helicase (DNA) B			ISO	7	59,311,833	59,338,961	RGD:1624291	RGD
G	Orc6	origin recognition complex, subunit 6			ISO	19	23,116,888	23,124,657	RGD:1624291	RGD
G	Orc6	origin recognition complex, subunit 6			IEA	19	23,116,888	23,124,657	RGD:1600115	ENSEMBL
G	Pold1	polymerase (DNA directed), delta 1, catalytic subunit			IDA	1	95,010,719	95,021,686	RGD:2299945	RGD
G	Pold1	polymerase (DNA directed), delta 1, catalytic subunit			IMP	1	95,010,719	95,021,686	RGD:2307013	RGD
G	Pold2	polymerase (DNA directed), delta 2, accessory subunit			IMP	14	86,535,757	86,541,920	RGD:2307013	RGD
G	Pold3	polymerase (DNA-directed), delta 3, accessory subunit			IMP	1	157,453,059	157,490,563	RGD:2307013	RGD
G	Pold4	polymerase (DNA-directed), delta 4, accessory subunit			IMP	1	206,815,462	206,817,131	RGD:2307013	RGD
G	Pole2	polymerase (DNA directed), epsilon 2, accessory subunit			IEA	6	91,155,518	91,180,121	RGD:1600115	InterPro
G	RGD1306730	similar to cDNA sequence BC025641			ISS	1	187,949,938	187,954,825	RGD:1600115	UniProtKB
G	Rpain	RPA interacting protein			ISO	10	57,874,557	57,881,526	RGD:1624291	RGD
G	Rpain	RPA interacting protein			IEA	10	57,874,557	57,881,526	RGD:1600115	ENSEMBL
G	Top2a	topoisomerase (DNA) II alpha			IBA	10	87,771,337	87,800,960	RGD:1600115	RefGenome
double-strand break repair via homologous recombination
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Ap5s1	adaptor-related protein complex 5, sigma 1 subunit			IEA	3	118,916,234	118,919,526	RGD:1600115	ENSEMBL
G	Ap5s1	adaptor-related protein complex 5, sigma 1 subunit			ISO	3	118,916,234	118,919,526	RGD:1624291	RGD
G	Brca1	breast cancer 1, early onset			ISO	10	90,513,630	90,572,676	RGD:1624291	RGD
G	Brca2	breast cancer 2, early onset			ISO	12	4,282,952	4,323,693	RGD:1624291	RGD
G	Brca2	breast cancer 2, early onset			ISO	12	4,282,952	4,323,693	RGD:1624291	RGD
G	Brca2	breast cancer 2, early onset			ISS	12	4,282,952	4,323,693	RGD:1600115	UniProtKB
G	Brca2	breast cancer 2, early onset			IBA	12	4,282,952	4,323,693	RGD:1600115	RefGenome
G	Brca2	breast cancer 2, early onset			IEA	12	4,282,952	4,323,693	RGD:1600115	ENSEMBL
G	Brca2	breast cancer 2, early onset			IEA	12	4,282,952	4,323,693	RGD:1600115	ENSEMBL
G	Ercc4	excision repair cross-complementing rodent repair deficiency, complementation group 4			IBA	10	2,144,262	2,177,554	RGD:1600115	RefGenome
G	Ercc4	excision repair cross-complementing rodent repair deficiency, complementation group 4			ISO	10	2,144,262	2,177,554	RGD:1624291	RGD
G	Fan1	FANCD2/FANCI-associated nuclease 1			IEA	1	118,784,938	118,811,928	RGD:1600115	ENSEMBL
G	Fan1	FANCD2/FANCI-associated nuclease 1			ISO	1	118,784,938	118,811,928	RGD:1624291	RGD
G	Fan1	FANCD2/FANCI-associated nuclease 1			ISO	1	118,784,938	118,811,928	RGD:1624291	RGD
G	H2afx	H2A histone family, member X			ISO	8	47,312,609	47,313,938	RGD:1624291	RGD
G	H2afx	H2A histone family, member X			IEA	8	47,312,609	47,313,938	RGD:1600115	ENSEMBL
G	Hus1	HUS1 checkpoint homolog (S. pombe)			ISO	14	89,527,997	89,542,730	RGD:1624291	RGD
G	Hus1	HUS1 checkpoint homolog (S. pombe)			IEA	14	89,527,997	89,542,730	RGD:1600115	ENSEMBL
G	Ino80	INO80 homolog (S. cerevisiae)			ISO	3	105,898,279	105,979,698	RGD:1624291	RGD
G	Kiaa0415	KIAA0415 protein			IEA	12	12,490,951	12,505,621	RGD:1600115	ENSEMBL
G	LOC100360113	mortality factor 4 like 1-like			ISO	8	95,006,476	95,027,439	RGD:1624291	RGD
G	LOC100911267	DNA repair protein RAD51 homolog 1-like			IEA				RGD:1600115	ENSEMBL
G	Mcm8	minichromosome maintenance complex component 8			ISS	3	120,614,429	120,644,673	RGD:1600115	UniProtKB
G	Mcm8	minichromosome maintenance complex component 8			ISO	3	120,614,429	120,644,673	RGD:1624291	RGD
G	Mcmdc1	minichromosome maintenance deficient domain containing 1			ISS				RGD:1600115	UniProtKB
G	Mms22l	MMS22-like, DNA repair protein			ISO	5	39,528,968	39,645,371	RGD:1624291	RGD
G	Mms22l	MMS22-like, DNA repair protein			ISO	5	39,528,968	39,645,371	RGD:1624291	RGD
G	Mms22l	MMS22-like, DNA repair protein			ISO	5	39,528,968	39,645,371	RGD:1624291	RGD
G	Morf4l1	mortality factor 4 like 1			ISS	13	91,235,625	91,237,345	RGD:1600115	UniProtKB
G	Nabp1	nucleic acid binding protein 1			ISO	9	47,194,891	47,201,876	RGD:1624291	RGD
G	Nabp1	nucleic acid binding protein 1			ISS	9	47,194,891	47,201,876	RGD:1600115	UniProtKB
G	Nabp2	nucleic acid binding protein 2			ISO	7	1,693,100	1,698,698	RGD:1624291	RGD
G	Nabp2	nucleic acid binding protein 2			ISS	7	1,693,100	1,698,698	RGD:1600115	UniProtKB
G	Nsmce2	non-SMC element 2, MMS21 homolog (S. cerevisiae)			ISO	7	96,167,635	96,393,594	RGD:1624291	RGD
G	Nsmce2	non-SMC element 2, MMS21 homolog (S. cerevisiae)			ISS	7	96,167,635	96,393,594	RGD:1600115	UniProtKB
G	Palb2	partner and localizer of BRCA2			ISO	1	180,928,710	180,952,518	RGD:1624291	RGD
G	Palb2	partner and localizer of BRCA2			ISO	1	180,928,710	180,952,518	RGD:1624291	RGD
G	Psmd14	proteasome (prosome, macropain) 26S subunit, non-ATPase, 14			IEA	3	43,660,136	43,699,412	RGD:1600115	ENSEMBL
G	Psmd14	proteasome (prosome, macropain) 26S subunit, non-ATPase, 14			ISO	3	43,660,136	43,699,412	RGD:1624291	RGD
G	Rad51	RAD51 homolog (S. cerevisiae)			ISO	3	105,625,265	105,650,392	RGD:1624291	RGD
G	Rad51	RAD51 homolog (S. cerevisiae)			ISO	3	105,625,265	105,650,392	RGD:1624291	RGD
G	Rad51	RAD51 homolog (S. cerevisiae)			ISO	3	105,625,265	105,650,392	RGD:1624291	RGD
G	Rad52	RAD52 homolog (S. cerevisiae)			ISO	4	156,281,973	156,295,238	RGD:1624291	RGD
G	Rad54b	RAD54 homolog B (S. cerevisiae)			ISO	5	25,830,524	25,899,650	RGD:1624291	RGD
G	Rad54l	RAD54 like (S. cerevisiae)			IEA				RGD:1600115	ENSEMBL
G	Rad54l	RAD54 like (S. cerevisiae)			ISO				RGD:1624291	RGD
G	Rbbp8	retinoblastoma binding protein 8			ISS	18	3,266,565	3,333,153	RGD:1600115	UniProtKB
G	Rbbp8	retinoblastoma binding protein 8			ISO	18	3,266,565	3,333,153	RGD:1624291	RGD
G	Rpa1	replication protein A1			ISO	10	62,613,169	62,656,565	RGD:1624291	RGD
G	Rpa1	replication protein A1			IEA	10	62,613,169	62,656,565	RGD:1600115	ENSEMBL
G	Sfr1	SWI5-dependent recombination repair 1			ISO	1	253,079,656	253,105,342	RGD:1624291	RGD
G	Sfr1	SWI5-dependent recombination repair 1			ISO	1	253,079,656	253,105,342	RGD:1624291	RGD
G	Sfr1	SWI5-dependent recombination repair 1			ISS	1	253,079,656	253,105,342	RGD:1600115	UniProtKB
G	Shfm1	split hand/foot malformation (ectrodactyly) type 1			ISO	4	31,316,084	31,336,240	RGD:1624291	RGD
G	Shfm1	split hand/foot malformation (ectrodactyly) type 1			IEA	4	31,316,084	31,336,240	RGD:1600115	ENSEMBL
G	Slx1b	SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)			ISO	1	185,843,372	185,848,919	RGD:1624291	RGD
G	Slx4	SLX4 structure-specific endonuclease subunit			ISO	10	11,778,216	11,816,839	RGD:1624291	RGD
G	Slx4	SLX4 structure-specific endonuclease subunit			ISO	10	11,778,216	11,816,839	RGD:1624291	RGD
G	Smc5	structural maintenance of chromosomes 5			IEA	1	226,494,137	226,566,143	RGD:1600115	ENSEMBL
G	Smc5	structural maintenance of chromosomes 5			ISO	1	226,494,137	226,566,143	RGD:1624291	RGD
G	Smc6	structural maintenance of chromosomes 6			IEA	6	34,710,177	34,763,158	RGD:1600115	InterPro
G	Swi5	SWI5 recombination repair homolog (yeast)			ISO	3	11,402,738	11,411,870	RGD:1624291	RGD
G	Swi5	SWI5 recombination repair homolog (yeast)			ISO	3	11,402,738	11,411,870	RGD:1624291	RGD
G	Swi5	SWI5 recombination repair homolog (yeast)			ISS	3	11,402,738	11,411,870	RGD:1600115	UniProtKB
G	Swsap1	SWIM-type zinc finger 7 associated protein 1			IEA	8	21,058,317	21,060,845	RGD:1600115	ENSEMBL
G	Swsap1	SWIM-type zinc finger 7 associated protein 1			ISO	8	21,058,317	21,060,845	RGD:1624291	RGD
G	Tonsl	tonsoku-like, DNA repair protein			ISS	7	114,674,549	114,689,284	RGD:1600115	UniProtKB
G	Tonsl	tonsoku-like, DNA repair protein			ISO	7	114,674,549	114,689,284	RGD:1624291	RGD
G	Tonsl	tonsoku-like, DNA repair protein			ISO	7	114,674,549	114,689,284	RGD:1624291	RGD
G	Tonsl	tonsoku-like, DNA repair protein			ISO	7	114,674,549	114,689,284	RGD:1624291	RGD
G	Ube2n	ubiquitin-conjugating enzyme E2N			ISO	7	32,719,959	32,750,002	RGD:1624291	RGD
G	Xrcc2	X-ray repair complementing defective repair in Chinese hamster cells 2			ISO	4	4,817,222	4,835,725	RGD:1624291	RGD
G	Xrcc2	X-ray repair complementing defective repair in Chinese hamster cells 2			IEA	4	4,817,222	4,835,725	RGD:1600115	ENSEMBL
G	Yy1	YY1 transcription factor			ISO	6	133,132,419	133,156,686	RGD:1624291	RGD
G	Yy1	YY1 transcription factor			IEA	6	133,132,419	133,156,686	RGD:1600115	ENSEMBL
G	Zfyve26	zinc finger, FYVE domain containing 26			IEA	6	101,999,868	102,065,689	RGD:1600115	ENSEMBL
G	Zfyve26	zinc finger, FYVE domain containing 26			ISO	6	101,999,868	102,065,689	RGD:1624291	RGD
G	Zswim7	zinc finger, SWIM-type containing 7			ISO	10	48,438,718	48,450,809	RGD:1624291	RGD
double-strand break repair via nonhomologous end joining
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Lig1	ligase I, DNA, ATP-dependent			ISO	1	73,728,892	73,767,429	RGD:1624291	RGD
G	Lig3	ligase III, DNA, ATP-dependent			ISO	10	71,000,287	71,021,398	RGD:1624291	RGD
G	Lig3	ligase III, DNA, ATP-dependent			IEA	10	71,000,287	71,021,398	RGD:1600115	ENSEMBL
G	Lig4	ligase IV, DNA, ATP-dependent			ISO	16	84,881,880	84,888,448	RGD:1624291	RGD
G	Lig4	ligase IV, DNA, ATP-dependent			ISO	16	84,881,880	84,888,448	RGD:1624291	RGD
G	Lig4	ligase IV, DNA, ATP-dependent			ISO	16	84,881,880	84,888,448	RGD:1624291	RGD
G	Lig4	ligase IV, DNA, ATP-dependent			ISO	16	84,881,880	84,888,448	RGD:1624291	RGD
G	Lig4	ligase IV, DNA, ATP-dependent			IBA	16	84,881,880	84,888,448	RGD:1600115	RefGenome
G	Mlh1	mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)			ISO	8	115,616,396	115,653,471	RGD:1624291	RGD
G	Mlh1	mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)			IEA	8	115,616,396	115,653,471	RGD:1600115	ENSEMBL
G	Nhej1	nonhomologous end-joining factor 1			ISO	9	74,309,152	74,408,397	RGD:1624291	RGD
G	Nhej1	nonhomologous end-joining factor 1			ISO	9	74,309,152	74,408,397	RGD:1624291	RGD
G	Nhej1	nonhomologous end-joining factor 1			ISS	9	74,309,152	74,408,397	RGD:1600115	UniProtKB
G	Nhej1	nonhomologous end-joining factor 1			ISS	9	74,309,152	74,408,397		UniProtKB
G	Nsmce2	non-SMC element 2, MMS21 homolog (S. cerevisiae)		NOT	ISO	7	96,167,635	96,393,594	RGD:1624291	RGD
G	Pola1	polymerase (DNA directed), alpha 1, catalytic subunit			ISO	X	80,650,454	80,965,833	RGD:1624291	RGD
G	Pola1	polymerase (DNA directed), alpha 1, catalytic subunit			ISS	X	80,650,454	80,965,833	RGD:1600115	UniProtKB
G	Pola1	polymerase (DNA directed), alpha 1, catalytic subunit			IBA	X	80,650,454	80,965,833	RGD:1600115	RefGenome
G	Prkdc	protein kinase, DNA activated, catalytic polypeptide			IEA	11	86,951,420	87,169,229	RGD:1600115	InterPro
G	Psmd14	proteasome (prosome, macropain) 26S subunit, non-ATPase, 14			IEA	3	43,660,136	43,699,412	RGD:1600115	ENSEMBL
G	Psmd14	proteasome (prosome, macropain) 26S subunit, non-ATPase, 14			ISO	3	43,660,136	43,699,412	RGD:1624291	RGD
G	Rnf8	ring finger protein 8, E3 ubiquitin protein ligase			ISO	20	7,929,802	7,954,697	RGD:1624291	RGD
G	Rnf8	ring finger protein 8, E3 ubiquitin protein ligase			ISS	20	7,929,802	7,954,697	RGD:1600115	UniProtKB
G	Rnf8	ring finger protein 8, E3 ubiquitin protein ligase			ISO	20	7,929,802	7,954,697	RGD:1624291	RGD
G	Smc5	structural maintenance of chromosomes 5		NOT	ISO	1	226,494,137	226,566,143	RGD:1624291	RGD
G	Xrcc4	X-ray repair complementing defective repair in Chinese hamster cells 4			ISO	2	19,904,490	20,158,358	RGD:1624291	RGD
G	Xrcc4	X-ray repair complementing defective repair in Chinese hamster cells 4			ISO	2	19,904,490	20,158,358	RGD:1624291	RGD
G	Xrcc4	X-ray repair complementing defective repair in Chinese hamster cells 4			ISO	2	19,904,490	20,158,358	RGD:1624291	RGD
G	Xrcc4	X-ray repair complementing defective repair in Chinese hamster cells 4			IEA	2	19,904,490	20,158,358	RGD:1600115	ENSEMBL
G	Xrcc4	X-ray repair complementing defective repair in Chinese hamster cells 4			IEA	2	19,904,490	20,158,358	RGD:1600115	ENSEMBL
G	Xrcc5	X-ray repair complementing defective repair in Chinese hamster cells 5			ISO	9	71,472,459	71,581,936	RGD:1624291	RGD
G	Xrcc5	X-ray repair complementing defective repair in Chinese hamster cells 5			IEA	9	71,472,459	71,581,936	RGD:1600115	InterPro
G	Xrcc6	X-ray repair complementing defective repair in Chinese hamster cells 6			ISO	7	120,401,944	120,422,923	RGD:1624291	RGD
G	Xrcc6	X-ray repair complementing defective repair in Chinese hamster cells 6			ISO	7	120,401,944	120,422,923	RGD:1624291	RGD
G	Xrcc6	X-ray repair complementing defective repair in Chinese hamster cells 6			IEA	7	120,401,944	120,422,923	RGD:1600115	ENSEMBL
G	Xrcc6	X-ray repair complementing defective repair in Chinese hamster cells 6			IEA	7	120,401,944	120,422,923	RGD:1600115	InterPro
lagging strand elongation
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Lig1	ligase I, DNA, ATP-dependent			IBA	1	73,728,892	73,767,429	RGD:1600115	RefGenome
G	Lig3	ligase III, DNA, ATP-dependent			IBA	10	71,000,287	71,021,398	RGD:1600115	RefGenome
G	Lig4	ligase IV, DNA, ATP-dependent			IBA	16	84,881,880	84,888,448	RGD:1600115	RefGenome
G	Pola1	polymerase (DNA directed), alpha 1, catalytic subunit			ISO	X	80,650,454	80,965,833	RGD:1624291	RGD
G	Pola1	polymerase (DNA directed), alpha 1, catalytic subunit			ISO	X	80,650,454	80,965,833	RGD:1624291	RGD
G	Pola1	polymerase (DNA directed), alpha 1, catalytic subunit			ISS	X	80,650,454	80,965,833	RGD:1600115	UniProtKB
leading strand elongation
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Pola1	polymerase (DNA directed), alpha 1, catalytic subunit			ISO	X	80,650,454	80,965,833	RGD:1624291	RGD
G	Pola1	polymerase (DNA directed), alpha 1, catalytic subunit			ISO	X	80,650,454	80,965,833	RGD:1624291	RGD
G	Pola1	polymerase (DNA directed), alpha 1, catalytic subunit			ISS	X	80,650,454	80,965,833	RGD:1600115	UniProtKB
meiotic DNA repair synthesis
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Spata22	spermatogenesis associated 22			ISO	10	60,205,533	60,221,778	RGD:1624291	RGD
mitochondrial DNA replication
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Dna2	DNA replication helicase/nuclease 2			IEA	20	25,288,326	25,316,851	RGD:1600115	ENSEMBL
G	Dna2	DNA replication helicase/nuclease 2			ISO	20	25,288,326	25,316,851	RGD:1624291	RGD
G	Dna2	DNA replication helicase/nuclease 2			ISO	20	25,288,326	25,316,851	RGD:1624291	RGD
G	Dnaja3	DnaJ (Hsp40) homolog, subfamily A, member 3			ISO	10	10,984,721	11,009,374	RGD:1624291	RGD
G	Dnaja3	DnaJ (Hsp40) homolog, subfamily A, member 3			IEA	10	10,984,721	11,009,374	RGD:1600115	ENSEMBL
G	Peo1	progressive external ophthalmoplegia 1			IEA	1	250,073,350	250,079,743	RGD:1600115	ENSEMBL
G	Peo1	progressive external ophthalmoplegia 1			ISO	1	250,073,350	250,079,743	RGD:1624291	RGD
G	Peo1	progressive external ophthalmoplegia 1			ISO	1	250,073,350	250,079,743	RGD:1624291	RGD
G	Polg	polymerase (DNA directed), gamma			ISO	1	135,197,075	135,212,178	RGD:1624291	RGD
G	Polg	polymerase (DNA directed), gamma			IEA	1	135,197,075	135,212,178	RGD:1600115	ENSEMBL
G	Rnaseh1	ribonuclease H1			ISO	6	46,528,591	46,537,960	RGD:1624291	RGD
G	Rnaseh1	ribonuclease H1			IEA	6	46,528,591	46,537,960	RGD:1600115	ENSEMBL
G	Rrm2b	ribonucleotide reductase M2 B (TP53 inducible)			ISO	7	73,432,161	73,459,541	RGD:1624291	RGD
G	Tefm	transcription elongation factor, mitochondrial		NOT	ISO	10	68,341,244	68,345,583	RGD:1624291	RGD
G	Tfam	transcription factor A, mitochondrial			TAS	20	18,100,629	18,112,682	RGD:727414	RGD
G	Tk2	thymidine kinase 2, mitochondrial			IEA	19	667,538	689,556	RGD:1600115	ENSEMBL
G	Tk2	thymidine kinase 2, mitochondrial			ISO	19	667,538	689,556	RGD:1624291	RGD
negative regulation of DNA endoreduplication
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Fbxw7	F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase			ISO	2	176,675,226	176,750,737	RGD:1624291	RGD
G	Mre11a	MRE11 meiotic recombination 11 homolog A (S. cerevisiae)			ISO	8	11,588,409	11,632,483	RGD:1624291	RGD
G	Mre11a	MRE11 meiotic recombination 11 homolog A (S. cerevisiae)			IEA	8	11,588,409	11,632,483	RGD:1600115	ENSEMBL
G	Smc1a	structural maintenance of chromosomes 1A			ISO	X	41,503,393	41,547,830	RGD:1624291	RGD
G	Smc3	structural maintenance of chromosomes 3			IEA	1	259,822,480	259,865,602	RGD:1600115	ENSEMBL
G	Smc3	structural maintenance of chromosomes 3			ISO	1	259,822,480	259,865,602	RGD:1624291	RGD
G	Stag2	stromal antigen 2			IEA	X	2,840,102	2,970,905	RGD:1600115	ENSEMBL
G	Stag2	stromal antigen 2			ISO	X	2,840,102	2,970,905	RGD:1624291	RGD
negative regulation of DNA repair
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Rps3	ribosomal protein S3			ISO	1	156,811,470	156,816,770	RGD:1624291	RGD
negative regulation of DNA replication
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Atr	ataxia telangiectasia and Rad3 related			ISO	8	100,936,342	101,014,881	RGD:1624291	RGD
G	Cdan1	codanin 1			IEA	3	107,495,860	107,508,249	RGD:1600115	ENSEMBL
G	Cdan1	codanin 1			ISO	3	107,495,860	107,508,249	RGD:1624291	RGD
G	Enpp7	ectonucleotide pyrophosphatase/phosphodiesterase 7			ISO				RGD:1624291	RGD
G	Gmnn	geminin			ISO	17	47,372,316	47,380,559	RGD:1624291	RGD
G	Gmnn	geminin			ISO	17	47,372,316	47,380,559	RGD:1624291	RGD
G	Gmnn	geminin			IEA	17	47,372,316	47,380,559	RGD:1600115	ENSEMBL
G	Gtpbp4	GTP binding protein 4			ISO	17	72,100,899	72,120,636	RGD:1624291	RGD
G	Gtpbp4	GTP binding protein 4			ISS	17	72,100,899	72,120,636	RGD:1600115	HGNC
G	Hcrt	hypocretin			IDA	10	89,699,633	89,700,847	RGD:1600965	RGD
G	Hmgb1	high mobility group box 1			IDA				RGD:2316772	RGD
G	Hus1	HUS1 checkpoint homolog (S. pombe)			ISO	14	89,527,997	89,542,730	RGD:1624291	RGD
G	Hus1	HUS1 checkpoint homolog (S. pombe)			IEA	14	89,527,997	89,542,730	RGD:1600115	ENSEMBL
G	Inppl1	inositol polyphosphate phosphatase-like 1			IMP	1	159,278,131	159,292,740	RGD:1626126	RGD
G	Mapk15	mitogen-activated protein kinase 15			IMP	7	114,026,694	114,032,007	RGD:632686	RGD
G	Nf2	neurofibromin 2 (merlin)			ISO	14	85,415,142	85,508,807	RGD:1624291	RGD
G	Nf2	neurofibromin 2 (merlin)			IEA	14	85,415,142	85,508,807	RGD:1600115	ENSEMBL
G	Pds5a	PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)			ISS	14	45,242,856	45,339,943	RGD:1600115	UniProtKB
G	Pds5a	PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)			ISO	14	45,242,856	45,339,943	RGD:1624291	RGD
G	Rad17	RAD17 homolog (S. pombe)			ISO	2	31,424,504	31,454,313	RGD:1624291	RGD
G	Rad17	RAD17 homolog (S. pombe)			IEA	2	31,424,504	31,454,313	RGD:1600115	ENSEMBL
G	Terf1	telomeric repeat binding factor (NIMA-interacting) 1			ISO	5	2,556,918	2,586,086	RGD:1624291	RGD
G	Tgfb1	transforming growth factor, beta 1			ISO	1	80,894,705	80,911,020	RGD:1624291	RGD
G	Tgfb1	transforming growth factor, beta 1			ISS	1	80,894,705	80,911,020	RGD:1600115	UniProtKB
G	Tgfb3	transforming growth factor, beta 3			ISO	6	110,173,443	110,195,215	RGD:1624291	RGD
G	Tgfb3	transforming growth factor, beta 3			IEA	6	110,173,443	110,195,215	RGD:1600115	ENSEMBL
G	Tp53	tumor protein p53			ISO	10	56,399,721	56,411,150	RGD:1624291	RGD
G	Tspyl2	TSPY-like 2			ISO	X	41,836,670	41,842,281	RGD:1624291	RGD
G	Wapal	wings apart-like homolog (Drosophila)			IEA	16	10,337,231	10,408,154	RGD:1600115	ENSEMBL
G	Wapal	wings apart-like homolog (Drosophila)			ISO	16	10,337,231	10,408,154	RGD:1624291	RGD
negative regulation of double-strand break repair
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Otub1	OTU domain, ubiquitin aldehyde binding 1			ISS	1	209,871,581	209,879,518	RGD:1600115	UniProtKB
G	Otub1	OTU domain, ubiquitin aldehyde binding 1			ISO	1	209,871,581	209,879,518	RGD:1624291	RGD
G	Rnf169	ring finger protein 169			ISO	1	157,289,186	157,313,978	RGD:1624291	RGD
G	Trip12	thyroid hormone receptor interactor 12			ISS	9	83,961,411	84,085,077	RGD:1600115	UniProtKB
G	Twist1	twist basic helix-loop-helix transcription factor 1			ISO	6	52,605,869	52,607,863	RGD:1624291	RGD
G	Ubr5	ubiquitin protein ligase E3 component n-recognin 5			ISO	7	73,467,676	73,545,246	RGD:1624291	RGD
G	Ubr5	ubiquitin protein ligase E3 component n-recognin 5			ISS	7	73,467,676	73,545,246	RGD:1600115	UniProtKB
negative regulation of double-strand break repair via homologous recombination
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Parpbp	PARP1 binding protein			ISO	7	24,777,634	24,847,083	RGD:1624291	RGD
G	Parpbp	PARP1 binding protein			ISS	7	24,777,634	24,847,083	RGD:1600115	UniProtKB
negative regulation of double-strand break repair via nonhomologous end joining
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Hmga2	high mobility group AT-hook 2			ISO	7	59,638,555	59,753,791	RGD:1624291	RGD
G	Hmga2	high mobility group AT-hook 2			ISS	7	59,638,555	59,753,791	RGD:1600115	UniProtKB
negative regulation of mitochondrial DNA replication
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Pid1	phosphotyrosine interaction domain containing 1			ISO	9	83,412,797	83,429,039	RGD:1624291	RGD
G	Pid1	phosphotyrosine interaction domain containing 1			IEA	9	83,412,797	83,429,039	RGD:1600115	ENSEMBL
negative regulation of telomere maintenance
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Ercc1	excision repair cross-complementing rodent repair deficiency, complementation group 1			IEA	1	78,711,249	78,722,474	RGD:1600115	ENSEMBL
G	Ercc1	excision repair cross-complementing rodent repair deficiency, complementation group 1			ISO	1	78,711,249	78,722,474	RGD:1624291	RGD
G	Ercc4	excision repair cross-complementing rodent repair deficiency, complementation group 4			ISO	10	2,144,262	2,177,554	RGD:1624291	RGD
G	Terf2	telomeric repeat binding factor 2			IEA	19	36,930,490	36,958,589	RGD:1600115	ENSEMBL
G	Terf2	telomeric repeat binding factor 2			ISO	19	36,930,490	36,958,589	RGD:1624291	RGD
G	Terf2ip	telomeric repeat binding factor 2, interacting protein			ISO	19	41,946,621	41,954,910	RGD:1624291	RGD
G	Terf2ip	telomeric repeat binding factor 2, interacting protein			ISO	19	41,946,621	41,954,910	RGD:1624291	RGD
G	Terf2ip	telomeric repeat binding factor 2, interacting protein			IEA	19	41,946,621	41,954,910	RGD:1600115	ENSEMBL
G	Tinf2	TERF1 (TRF1)-interacting nuclear factor 2			ISO	15	33,828,924	33,832,032	RGD:1624291	RGD
negative regulation of telomere maintenance via telomerase
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Acd	adrenocortical dysplasia homolog (mouse)			ISO	19	35,530,557	35,533,249	RGD:1624291	RGD
G	Acd	adrenocortical dysplasia homolog (mouse)			ISO	19	35,530,557	35,533,249	RGD:1624291	RGD
G	Acd	adrenocortical dysplasia homolog (mouse)			IEA	19	35,530,557	35,533,249	RGD:1600115	ENSEMBL
G	Pml	promyelocytic leukemia			ISO	8	62,020,438	62,051,927	RGD:1624291	RGD
G	Pot1	protection of telomeres 1			ISO	4	52,233,404	52,289,574	RGD:1624291	RGD
G	Terf1	telomeric repeat binding factor (NIMA-interacting) 1			ISO	5	2,556,918	2,586,086	RGD:1624291	RGD
G	Terf1	telomeric repeat binding factor (NIMA-interacting) 1			IEA	5	2,556,918	2,586,086	RGD:1600115	ENSEMBL
G	Tinf2	TERF1 (TRF1)-interacting nuclear factor 2			ISO	15	33,828,924	33,832,032	RGD:1624291	RGD
G	Tinf2	TERF1 (TRF1)-interacting nuclear factor 2			IEA	15	33,828,924	33,832,032	RGD:1600115	ENSEMBL
nuclear cell cycle DNA replication
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Slbp	stem-loop binding protein			IEA	14	82,767,415	82,778,030	RGD:1600115	ENSEMBL
G	Slbp	stem-loop binding protein			ISO	14	82,767,415	82,778,030	RGD:1624291	RGD
G	Zfp830	zinc finger protein 830			ISO	10	70,983,767	70,985,231	RGD:1624291	RGD
positive regulation of DNA endoreduplication
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	E2f7	E2F transcription factor 7			ISS	7	49,689,755	49,751,823	RGD:1600115	UniProtKB
G	E2f7	E2F transcription factor 7			ISO	7	49,689,755	49,751,823	RGD:1624291	RGD
G	E2f8	E2F transcription factor 8			ISS	1	98,640,381	98,694,764	RGD:1600115	UniProtKB
G	E2f8	E2F transcription factor 8			ISO	1	98,640,381	98,694,764	RGD:1624291	RGD
G	E2f8	E2F transcription factor 8			ISO	1	98,640,381	98,694,764	RGD:1624291	RGD
positive regulation of DNA ligation
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	LOC100911267	DNA repair protein RAD51 homolog 1-like			IEA				RGD:1600115	ENSEMBL
G	Rad51	RAD51 homolog (S. cerevisiae)			ISO	3	105,625,265	105,650,392	RGD:1624291	RGD
positive regulation of DNA replication
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Areg	amphiregulin			ISO	14	18,466,313	18,475,571	RGD:1624291	RGD
G	Atf1	activating transcription factor 1			IMP	7	138,971,063	139,014,690	RGD:625519	RGD
G	Cacybp	calcyclin binding protein			IDA	13	75,623,161	75,633,644	RGD:2326117	RGD
G	Calr	calreticulin			ISO	19	24,964,775	24,969,670	RGD:1624291	RGD
G	Calr	calreticulin			IEA	19	24,964,775	24,969,670	RGD:1600115	ENSEMBL
G	Cdc42	cell division cycle 42 (GTP binding protein)			IMP	5	156,106,123	156,143,040	RGD:2293350	RGD
G	Cdk1	cyclin-dependent kinase 1			IMP	20	20,018,044	20,044,030	RGD:2316313	RGD
G	Csf2	colony stimulating factor 2 (granulocyte-macrophage)			ISO	10	39,665,850	39,667,831	RGD:1624291	RGD
G	Csf2	colony stimulating factor 2 (granulocyte-macrophage)			IEA	10	39,665,850	39,667,831	RGD:1600115	ENSEMBL
G	Cst3	cystatin C			IDA	3	137,650,903	137,654,776	RGD:2306501	RGD
G	Ctc1	CTS telomere maintenance complex component 1			ISO	10	55,768,182	55,788,836	RGD:1624291	RGD
G	Ctc1	CTS telomere maintenance complex component 1			IEA	10	55,768,182	55,788,836	RGD:1600115	ENSEMBL
G	Dna2	DNA replication helicase/nuclease 2			IEA	20	25,288,326	25,316,851	RGD:1600115	ENSEMBL
G	Dna2	DNA replication helicase/nuclease 2			ISO	20	25,288,326	25,316,851	RGD:1624291	RGD
G	Egfr	epidermal growth factor receptor			ISO	14	97,617,358	97,788,211	RGD:1624291	RGD
G	Egfr	epidermal growth factor receptor			IEA	14	97,617,358	97,788,211	RGD:1600115	ENSEMBL
G	Epo	erythropoietin			ISO	12	19,551,768	19,555,208	RGD:1624291	RGD
G	Epo	erythropoietin			IEA	12	19,551,768	19,555,208	RGD:1600115	ENSEMBL
G	Ereg	epiregulin			ISO	14	18,521,069	18,534,844	RGD:1624291	RGD
G	Ereg	epiregulin			ISO	14	18,521,069	18,534,844	RGD:1624291	RGD
G	Ereg	epiregulin			ISO	14	18,521,069	18,534,844	RGD:1624291	RGD
G	Ereg	epiregulin			ISO	14	18,521,069	18,534,844	RGD:1624291	RGD
G	Ereg	epiregulin			ISS	14	18,521,069	18,534,844	RGD:1600115	UniProtKB
G	Ereg	epiregulin			IDA	14	18,521,069	18,534,844	RGD:632743	UniProtKB
G	Fgf10	fibroblast growth factor 10			ISO	2	50,866,799	50,940,319	RGD:1624291	RGD
G	Fgf10	fibroblast growth factor 10			IEA	2	50,866,799	50,940,319	RGD:1600115	ENSEMBL
G	Gli1	GLI family zinc finger 1			ISO	7	67,288,291	67,297,461	RGD:1624291	RGD
G	Gli1	GLI family zinc finger 1			IEA	7	67,288,291	67,297,461	RGD:1600115	ENSEMBL
G	Gli2	GLI family zinc finger 2			ISO	13	31,551,089	31,607,264	RGD:1624291	RGD
G	Gli2	GLI family zinc finger 2			IEA	13	31,551,089	31,607,264	RGD:1600115	ENSEMBL
G	Hras	Harvey rat sarcoma virus oncogene			IMP	1	201,385,705	201,388,987	RGD:2293350	RGD
G	Hras	Harvey rat sarcoma virus oncogene			ISO	1	201,385,705	201,388,987	RGD:1624291	RGD
G	Igf1	insulin-like growth factor 1			ISO	7	24,531,669	24,605,742	RGD:1624291	RGD
G	Igf1	insulin-like growth factor 1			ISO	7	24,531,669	24,605,742	RGD:1624291	RGD
G	Igf1r	insulin-like growth factor 1 receptor			ISO	1	122,704,976	122,990,007	RGD:1624291	RGD
G	Igf1r	insulin-like growth factor 1 receptor			IEA	1	122,704,976	122,990,007	RGD:1600115	ENSEMBL
G	Il3	interleukin 3			ISO	10	39,684,691	39,687,041	RGD:1624291	RGD
G	Il6	interleukin 6			IMP	4	456,799	461,376	RGD:2306943	RGD
G	Ins2	insulin 2			ISO	1	202,935,548	202,936,379	RGD:1624291	RGD
G	Insr	insulin receptor			ISO	12	2,934,967	3,087,691	RGD:1624291	RGD
G	Insr	insulin receptor			IEA	12	2,934,967	3,087,691	RGD:1600115	ENSEMBL
G	Jun	jun proto-oncogene			IMP	5	115,358,166	115,361,259	RGD:2293350	RGD
G	Kctd13	potassium channel tetramerisation domain containing 13			IDA	1	186,104,306	186,122,853	RGD:1357162	RGD
G	Kitlg	KIT ligand			ISO	7	37,714,157	37,795,722	RGD:1624291	RGD
G	Kitlg	KIT ligand			IEA	7	37,714,157	37,795,722	RGD:1600115	ENSEMBL
G	Map2k4	mitogen activated protein kinase kinase 4			IMP	10	52,009,149	52,041,599	RGD:2293350	RGD
G	Mapk8	mitogen-activated protein kinase 8			IMP	16	8,925,133	9,004,897	RGD:2293350	RGD
G	Mas1	MAS1 oncogene			IDA	1	42,154,786	42,185,750	RGD:2316794	RGD
G	Met	met proto-oncogene			IMP	4	43,134,183	43,211,355	RGD:2317489	RGD
G	Npm1	nucleophosmin (nucleolar phosphoprotein B23, numatrin)			IDA	10	18,051,990	18,062,714	RGD:1600909	RGD
G	Npm2	nucleophosmin/nucleoplasmin 2			IDA	15	51,049,549	51,056,301	RGD:1600909	RGD
G	Obfc1	oligonucleotide/oligosaccharide-binding fold containing 1			ISO	1	252,875,485	252,909,299	RGD:1624291	RGD
G	Obfc1	oligonucleotide/oligosaccharide-binding fold containing 1			ISS	1	252,875,485	252,909,299	RGD:1600115	UniProtKB
G	Pdgfa	platelet-derived growth factor alpha polypeptide			ISO	12	16,151,045	16,172,412	RGD:1624291	RGD
G	Pdgfa	platelet-derived growth factor alpha polypeptide			ISO	12	16,151,045	16,172,412	RGD:1624291	RGD
G	Pdgfa	platelet-derived growth factor alpha polypeptide			ISO	12	16,151,045	16,172,412	RGD:1624291	RGD
G	Pdgfa	platelet-derived growth factor alpha polypeptide			ISS	12	16,151,045	16,172,412	RGD:1600115	UniProtKB
G	Pdgfb	platelet-derived growth factor beta polypeptide			ISO	7	118,244,385	118,262,021	RGD:1624291	RGD
G	Pdgfb	platelet-derived growth factor beta polypeptide			ISO	7	118,244,385	118,262,021	RGD:1624291	RGD
G	Pdgfb	platelet-derived growth factor beta polypeptide			IEA	7	118,244,385	118,262,021	RGD:1600115	ENSEMBL
G	Pdgfb	platelet-derived growth factor beta polypeptide			ISS	7	118,244,385	118,262,021	RGD:1600115	UniProtKB
G	Pdgfc	platelet derived growth factor C			ISO	2	172,635,732	172,811,004	RGD:1624291	RGD
G	Pdgfc	platelet derived growth factor C			IEA	2	172,635,732	172,811,004	RGD:1600115	ENSEMBL
G	Pdgfra	platelet derived growth factor receptor, alpha polypeptide			ISO	14	35,369,422	35,418,126	RGD:1624291	RGD
G	Pdgfra	platelet derived growth factor receptor, alpha polypeptide			IEA	14	35,369,422	35,418,126	RGD:1600115	ENSEMBL
G	Pdgfra	platelet derived growth factor receptor, alpha polypeptide			ISS	14	35,369,422	35,418,126	RGD:1600115	UniProtKB
G	Pla2g1b	phospholipase A2, group IB, pancreas			ISO	12	42,405,475	42,415,189	RGD:1624291	RGD
G	Pla2g1b	phospholipase A2, group IB, pancreas			IDA	12	42,405,475	42,415,189		BHF-UCL
G	Rac1	ras-related C3 botulinum toxin substrate 1			IMP	12	11,380,314	11,400,531	RGD:2293350	RGD
G	Shc1	SHC (Src homology 2 domain containing) transforming protein 1			IMP	2	181,616,581	181,628,144		BHF-UCL
G	Tgfb3	transforming growth factor, beta 3			ISO	6	110,173,443	110,195,215	RGD:1624291	RGD
G	Tgfb3	transforming growth factor, beta 3			IEA	6	110,173,443	110,195,215	RGD:1600115	ENSEMBL
G	Tnfaip1	tumor necrosis factor, alpha-induced protein 1 (endothelial)			IDA	10	64,632,189	64,646,879	RGD:1357162	RGD
G	Ucn	urocortin			IDA	6	25,216,788	25,217,618	RGD:1642796	RGD
positive regulation of DNA-dependent DNA replication
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Bmp4	bone morphogenetic protein 4			ISO	15	22,283,171	22,286,757	RGD:1624291	RGD
G	Bmp4	bone morphogenetic protein 4			ISS	15	22,283,171	22,286,757	RGD:1600115	UniProtKB
G	Bmp4	bone morphogenetic protein 4			IEA	15	22,283,171	22,286,757	RGD:1600115	ENSEMBL
G	Bmp5	bone morphogenetic protein 5			ISO	8	80,593,053	80,717,015	RGD:1624291	RGD
G	Bmp5	bone morphogenetic protein 5			IEA	8	80,593,053	80,717,015	RGD:1600115	ENSEMBL
positive regulation of DNA-dependent DNA replication initiation
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Cdk2	cyclin dependent kinase 2			ISO	7	2,000,196	2,007,682	RGD:1624291	RGD
G	Cdk2	cyclin dependent kinase 2			IEA	7	2,000,196	2,007,682	RGD:1600115	ENSEMBL
G	Ciz1	CDKN1A interacting zinc finger protein 1			ISO	3	11,489,384	11,506,431	RGD:1624291	RGD
G	Ciz1	CDKN1A interacting zinc finger protein 1			ISO	3	11,489,384	11,506,431	RGD:1624291	RGD
positive regulation of mismatch repair
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Prkcg	protein kinase C, gamma			ISO	1	64,145,749	64,172,712	RGD:1624291	RGD
G	Prkcg	protein kinase C, gamma			IEA	1	64,145,749	64,172,712	RGD:1600115	ENSEMBL
positive regulation of mitochondrial DNA replication
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Stoml2	stomatin (Epb7.2)-like 2			ISS	5	59,518,467	59,522,064	RGD:1600115	UniProtKB
G	Stoml2	stomatin (Epb7.2)-like 2			ISO	5	59,518,467	59,522,064	RGD:1624291	RGD
positive regulation of nuclear cell cycle DNA replication
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Ino80	INO80 homolog (S. cerevisiae)			ISO	3	105,898,279	105,979,698	RGD:1624291	RGD
positive regulation of telomere maintenance
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Terf2	telomeric repeat binding factor 2			ISO	19	36,930,490	36,958,589	RGD:1624291	RGD
G	Terf2	telomeric repeat binding factor 2			IEA	19	36,930,490	36,958,589	RGD:1600115	ENSEMBL
G	Tinf2	TERF1 (TRF1)-interacting nuclear factor 2			ISO	15	33,828,924	33,832,032	RGD:1624291	RGD
G	Tinf2	TERF1 (TRF1)-interacting nuclear factor 2			IEA	15	33,828,924	33,832,032	RGD:1600115	ENSEMBL
positive regulation of telomere maintenance via telomerase
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Pot1	protection of telomeres 1			ISO	4	52,233,404	52,289,574	RGD:1624291	RGD
G	Pot1	protection of telomeres 1			ISO	4	52,233,404	52,289,574	RGD:1624291	RGD
G	Terc	telomerase RNA component			ISO	2	117,234,446	117,234,833	RGD:1624291	RGD
G	Tnks	tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase			IEA	16	60,953,917	61,095,523	RGD:1600115	ENSEMBL
protection from non-homologous end joining at telomere
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Acd	adrenocortical dysplasia homolog (mouse)			ISO	19	35,530,557	35,533,249	RGD:1624291	RGD
G	Acd	adrenocortical dysplasia homolog (mouse)			IEA	19	35,530,557	35,533,249	RGD:1600115	ENSEMBL
G	Dclre1b	DNA cross-link repair 1B			ISO	2	199,025,718	199,034,230	RGD:1624291	RGD
G	Dclre1b	DNA cross-link repair 1B			ISO	2	199,025,718	199,034,230	RGD:1624291	RGD
G	Dclre1b	DNA cross-link repair 1B			IEA	2	199,025,718	199,034,230	RGD:1600115	ENSEMBL
G	Dclre1b	DNA cross-link repair 1B			IEA	2	199,025,718	199,034,230	RGD:1600115	ENSEMBL
G	Dclre1b	DNA cross-link repair 1B			ISS	2	199,025,718	199,034,230	RGD:1600115	UniProtKB
G	Dclre1b	DNA cross-link repair 1B			ISS	2	199,025,718	199,034,230	RGD:1600115	UniProtKB
G	Dclre1b	DNA cross-link repair 1B			ISO	2	199,025,718	199,034,230	RGD:1624291	RGD
G	Pot1b	protection of telomeres 1B			ISO				RGD:1624291	RGD
G	Terf2	telomeric repeat binding factor 2			ISO	19	36,930,490	36,958,589	RGD:1624291	RGD
G	Terf2	telomeric repeat binding factor 2			ISO	19	36,930,490	36,958,589	RGD:1624291	RGD
G	Terf2	telomeric repeat binding factor 2			IEA	19	36,930,490	36,958,589	RGD:1600115	ENSEMBL
G	Terf2	telomeric repeat binding factor 2			IEA	19	36,930,490	36,958,589	RGD:1600115	ENSEMBL
G	Terf2	telomeric repeat binding factor 2			ISO	19	36,930,490	36,958,589	RGD:1624291	RGD
G	Terf2ip	telomeric repeat binding factor 2, interacting protein		NOT	ISO	19	41,946,621	41,954,910	RGD:1624291	RGD
G	Terf2ip	telomeric repeat binding factor 2, interacting protein		NOT	ISO	19	41,946,621	41,954,910	RGD:1624291	RGD
G	Terf2ip	telomeric repeat binding factor 2, interacting protein			ISO	19	41,946,621	41,954,910	RGD:1624291	RGD
G	Terf2ip	telomeric repeat binding factor 2, interacting protein			ISS	19	41,946,621	41,954,910	RGD:1600115	UniProtKB
recombinational repair
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	MGC94282	similar to 5930416I19Rik protein			IEA	4	165,378,057	165,383,443	RGD:1600115	ENSEMBL
regulation of DNA endoreduplication
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Senp2	Sumo1/sentrin/SMT3 specific peptidase 2			ISO	11	81,225,720	81,259,934	RGD:1624291	RGD
regulation of DNA repair
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Cdk9	cyclin-dependent kinase 9			ISO	3	11,672,861	11,677,709	RGD:1624291	RGD
G	Cdk9	cyclin-dependent kinase 9			IEA	3	11,672,861	11,677,709	RGD:1600115	ENSEMBL
G	Ier3	immediate early response 3			ISO	20	3,076,568	3,077,772	RGD:1624291	RGD
G	Usp1	ubiquitin specific peptidase 1			ISO	5	119,364,515	119,375,885	RGD:1624291	RGD
G	Usp1	ubiquitin specific peptidase 1			ISS	5	119,364,515	119,375,885	RGD:1600115	UniProtKB
regulation of DNA replication
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Ccdc88a	coiled coil domain containing 88A			ISO	14	110,376,486	110,525,468	RGD:1624291	RGD
G	Dscc1	DNA replication and sister chromatid cohesion 1			IEA	7	91,602,671	91,618,122	RGD:1600115	ENSEMBL
G	Dscc1	DNA replication and sister chromatid cohesion 1			ISO	7	91,602,671	91,618,122	RGD:1624291	RGD
G	Ehmt2	euchromatic histone lysine N-methyltransferase 2			ISO	20	4,021,679	4,033,709	RGD:1624291	RGD
G	Ehmt2	euchromatic histone lysine N-methyltransferase 2			ISO	20	4,021,679	4,033,709	RGD:1624291	RGD
G	Ehmt2	euchromatic histone lysine N-methyltransferase 2			IEA	20	4,021,679	4,033,709	RGD:1600115	ENSEMBL
G	Esco1	establishment of cohesion 1 homolog 1 (S. cerevisiae)			IEA	18	1,935,297	1,991,046	RGD:1600115	ENSEMBL
G	Esco1	establishment of cohesion 1 homolog 1 (S. cerevisiae)			ISO	18	1,935,297	1,991,046	RGD:1624291	RGD
G	Esco2	establishment of sister chromatid cohesion N-acetyltransferase 2			IEA	15	45,239,871	45,254,898	RGD:1600115	InterPro
G	Esco2	establishment of sister chromatid cohesion N-acetyltransferase 2			ISO	15	45,239,871	45,254,898	RGD:1624291	RGD
G	Id3	inhibitor of DNA binding 3			IMP	5	154,934,138	154,935,707	RGD:1549434	RGD
G	Mcidas	multiciliate differentiation and DNA synthesis associated cell cycle protein			IEA	2	44,384,186	44,390,539	RGD:1600115	InterPro
G	Pcna	proliferating cell nuclear antigen			IEA	3	120,008,715	120,012,589	RGD:1600115	InterPro
G	Smc3	structural maintenance of chromosomes 3			ISO	1	259,822,480	259,865,602	RGD:1624291	RGD
G	Smc3	structural maintenance of chromosomes 3			ISS	1	259,822,480	259,865,602	RGD:1600115	UniProtKB
regulation of DNA-dependent DNA replication initiation
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Cdt1	chromatin licensing and DNA replication factor 1			ISO	19	52,848,559	52,853,880	RGD:1624291	RGD
G	Cdt1	chromatin licensing and DNA replication factor 1			IEA	19	52,848,559	52,853,880	RGD:1600115	ENSEMBL
G	Cdt1	chromatin licensing and DNA replication factor 1			IEA	19	52,848,559	52,853,880	RGD:1600115	ENSEMBL
G	Cdt1	chromatin licensing and DNA replication factor 1			ISO	19	52,848,559	52,853,880	RGD:1624291	RGD
G	Ticrr	TOPBP1-interacting checkpoint and replication regulator			ISO	1	135,428,695	135,471,349	RGD:1624291	RGD
G	Wrnip1	Werner helicase interacting protein 1			ISO	17	37,982,094	38,002,342	RGD:1624291	RGD
G	Wrnip1	Werner helicase interacting protein 1			ISS	17	37,982,094	38,002,342	RGD:1600115	UniProtKB
regulation of double-strand break repair via homologous recombination
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Chek1	checkpoint kinase 1			ISO	8	37,954,322	37,974,748	RGD:1624291	RGD
G	Chek1	checkpoint kinase 1			ISS	8	37,954,322	37,974,748	RGD:1600115	UniProtKB
G	Ppp4c	protein phosphatase 4, catalytic subunit			ISO	1	185,961,286	185,967,851	RGD:1624291	RGD
G	Ppp4c	protein phosphatase 4, catalytic subunit			IEA	1	185,961,286	185,967,851	RGD:1600115	ENSEMBL
G	Ppp4c	protein phosphatase 4, catalytic subunit			ISS	1	185,961,286	185,967,851	RGD:1600115	UniProtKB
G	Ppp4r2	protein phosphatase 4, regulatory subunit 2			ISO	4	135,720,581	135,761,507	RGD:1624291	RGD
G	Rpa2	replication protein A2			ISO	5	152,369,550	152,380,370	RGD:1624291	RGD
G	Rpa2	replication protein A2			ISS	5	152,369,550	152,380,370	RGD:1600115	UniProtKB
G	Rtel1	regulator of telomere elongation helicase 1			ISO	3	170,461,613	170,496,959	RGD:1624291	RGD
G	Rtel1	regulator of telomere elongation helicase 1			ISS	3	170,461,613	170,496,959	RGD:1600115	UniProtKB
G	Sirt6	sirtuin 6			ISO	7	9,555,269	9,560,695	RGD:1624291	RGD
G	Sirt6	sirtuin 6			IEA	7	9,555,269	9,560,695	RGD:1600115	ENSEMBL
G	Terf2ip	telomeric repeat binding factor 2, interacting protein			ISO	19	41,946,621	41,954,910	RGD:1624291	RGD
G	Terf2ip	telomeric repeat binding factor 2, interacting protein			ISS	19	41,946,621	41,954,910	RGD:1600115	UniProtKB
G	Tex15	testis expressed 15			ISO	16	62,371,381	62,385,448	RGD:1624291	RGD
G	Tex15	testis expressed 15			IEA	16	62,371,381	62,385,448	RGD:1600115	ENSEMBL
regulation of double-strand break repair via nonhomologous end joining
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Dek	DEK oncogene			ISO	17	23,633,551	23,655,507	RGD:1624291	RGD
G	Dek	DEK oncogene			IEA	17	23,633,551	23,655,507	RGD:1600115	ENSEMBL
regulation of mismatch repair
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Axin2	axin 2			IEA	10	98,294,466	98,321,830	RGD:1600115	ENSEMBL
G	Axin2	axin 2			ISO	10	98,294,466	98,321,830	RGD:1624291	RGD
regulation of mitochondrial DNA replication
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Lonp1	lon peptidase 1, mitochondrial			IEA				RGD:1600115	UniProtKB
regulation of nuclear cell cycle DNA replication
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Cdt1	chromatin licensing and DNA replication factor 1			ISO	19	52,848,559	52,853,880	RGD:1624291	RGD
G	Ilkap	integrin-linked kinase-associated serine/threonine phosphatase			IDA	9	90,602,949	90,626,753	RGD:632254	RGD
regulation of telomere maintenance
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Bmyc	brain expressed myelocytomatosis oncogene			IEA	3	3,864,740	3,865,499	RGD:1600115	ENSEMBL
G	Myc	myelocytomatosis oncogene			ISO	7	98,953,142	98,958,060	RGD:1624291	RGD
G	Myc	myelocytomatosis oncogene			ISS	7	98,953,142	98,958,060	RGD:1600115	UniProtKB
G	Pif1	Pif1/Rrm3 DNA-helicase-like protein			IEA	8	69,844,293	69,851,508	RGD:1600115	ENSEMBL
G	Ylpm1	YLP motif containing 1			ISO	6	109,041,410	109,117,751	RGD:1624291	RGD
replication fork arrest
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Cdk9	cyclin-dependent kinase 9			ISO	3	11,672,861	11,677,709	RGD:1624291	RGD
G	Cdk9	cyclin-dependent kinase 9			IEA	3	11,672,861	11,677,709	RGD:1600115	ENSEMBL
replication fork processing
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Blm	Bloom syndrome, RecQ helicase-like			ISO	1	136,271,573	136,358,077	RGD:1624291	RGD
G	Blm	Bloom syndrome, RecQ helicase-like			IEA	1	136,271,573	136,358,077	RGD:1600115	ENSEMBL
G	Mms22l	MMS22-like, DNA repair protein			ISO	5	39,528,968	39,645,371	RGD:1624291	RGD
G	Mms22l	MMS22-like, DNA repair protein			ISO	5	39,528,968	39,645,371	RGD:1624291	RGD
G	Mms22l	MMS22-like, DNA repair protein			ISO	5	39,528,968	39,645,371	RGD:1624291	RGD
G	Tonsl	tonsoku-like, DNA repair protein			ISS	7	114,674,549	114,689,284	RGD:1600115	UniProtKB
G	Tonsl	tonsoku-like, DNA repair protein			ISO	7	114,674,549	114,689,284	RGD:1624291	RGD
G	Tonsl	tonsoku-like, DNA repair protein			ISO	7	114,674,549	114,689,284	RGD:1624291	RGD
G	Tonsl	tonsoku-like, DNA repair protein			ISO	7	114,674,549	114,689,284	RGD:1624291	RGD
G	Wrn	Werner syndrome, RecQ helicase-like			ISO	16	62,535,144	62,668,700	RGD:1624291	RGD
G	Wrn	Werner syndrome, RecQ helicase-like			ISO	16	62,535,144	62,668,700	RGD:1624291	RGD
G	Zranb3	zinc finger, RAN-binding domain containing 3			ISO	13	40,648,221	40,803,738	RGD:1624291	RGD
G	Zranb3	zinc finger, RAN-binding domain containing 3			ISO	13	40,648,221	40,803,738	RGD:1624291	RGD
replication fork protection
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Brca2	breast cancer 2, early onset			ISO	12	4,282,952	4,323,693	RGD:1624291	RGD
G	Brca2	breast cancer 2, early onset			IEA	12	4,282,952	4,323,693	RGD:1600115	ENSEMBL
G	Tipin	timeless interacting protein			IEA	8	68,480,152	68,502,451	RGD:1600115	InterPro
G	Tipin-ps1	timeless interacting protein, pseudogene 1			IEA				RGD:1600115	InterPro
G	Tipinl1	TIMELESS interacting protein like 1			IEA	9	112,832,275	112,833,123	RGD:1600115	InterPro
G	Zranb3	zinc finger, RAN-binding domain containing 3			ISO	13	40,648,221	40,803,738	RGD:1624291	RGD
G	Zranb3	zinc finger, RAN-binding domain containing 3			ISO	13	40,648,221	40,803,738	RGD:1624291	RGD
RNA-dependent DNA replication
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Hsd11b1	hydroxysteroid 11-beta dehydrogenase 1			IEA	13	109,063,491	109,089,468	RGD:1600115	InterPro
G	LOC500712	Ab1-233			IEA				RGD:1600115	InterPro
single strand break repair
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Aplf	aprataxin and PNKP like factor			ISO	4	121,796,926	121,849,410	RGD:1624291	RGD
G	Aptx	aprataxin			ISO	5	58,060,210	58,081,165	RGD:1624291	RGD
G	Aptx	aprataxin			ISO	5	58,060,210	58,081,165	RGD:1624291	RGD
G	Aptx	aprataxin			ISO	5	58,060,210	58,081,165	RGD:1624291	RGD
G	Aptx	aprataxin			IEA	5	58,060,210	58,081,165	RGD:1600115	ENSEMBL
G	Aptx	aprataxin			IEA	5	58,060,210	58,081,165	RGD:1600115	ENSEMBL
G	Lig4	ligase IV, DNA, ATP-dependent			ISO	16	84,881,880	84,888,448	RGD:1624291	RGD
G	Lig4	ligase IV, DNA, ATP-dependent			IEA	16	84,881,880	84,888,448	RGD:1600115	ENSEMBL
G	Sirt1	sirtuin 1			IEA	20	25,675,302	25,686,494	RGD:1600115	ENSEMBL
G	Sirt1	sirtuin 1			ISO	20	25,675,302	25,686,494	RGD:1624291	RGD
G	Tdp1	tyrosyl-DNA phosphodiesterase 1			ISO	6	124,095,259	124,162,815	RGD:1624291	RGD
G	Tdp1	tyrosyl-DNA phosphodiesterase 1			ISO	6	124,095,259	124,162,815	RGD:1624291	RGD
G	Tdp1	tyrosyl-DNA phosphodiesterase 1			ISO	6	124,095,259	124,162,815	RGD:1624291	RGD
G	Tdp1	tyrosyl-DNA phosphodiesterase 1			ISO	6	124,095,259	124,162,815	RGD:1624291	RGD
G	Tdp1	tyrosyl-DNA phosphodiesterase 1			IEA	6	124,095,259	124,162,815	RGD:1600115	ENSEMBL
G	Tnp1	transition protein 1			ISO	9	72,397,750	72,398,359	RGD:1624291	RGD
G	Tnp1	transition protein 1			ISS	9	72,397,750	72,398,359	RGD:1600115	UniProtKB
G	Trpc2	transient receptor potential cation channel, subfamily C, member 2			IEA	1	159,542,801	159,576,294	RGD:1600115	InterPro
G	Xrcc1	X-ray repair complementing defective repair in Chinese hamster cells 1			IEA	1	79,834,167	79,860,300	RGD:1600115	InterPro
telomere capping
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Acd	adrenocortical dysplasia homolog (mouse)			ISO	19	35,530,557	35,533,249	RGD:1624291	RGD
G	Acd	adrenocortical dysplasia homolog (mouse)			ISO	19	35,530,557	35,533,249	RGD:1624291	RGD
G	Pot1	protection of telomeres 1			ISO	4	52,233,404	52,289,574	RGD:1624291	RGD
G	Pot1	protection of telomeres 1			ISO	4	52,233,404	52,289,574	RGD:1624291	RGD
G	Pot1b	protection of telomeres 1B			ISO				RGD:1624291	RGD
G	Terf2	telomeric repeat binding factor 2			ISO	19	36,930,490	36,958,589	RGD:1624291	RGD
G	Terf2	telomeric repeat binding factor 2			ISO	19	36,930,490	36,958,589	RGD:1624291	RGD
telomere maintenance
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Acd	adrenocortical dysplasia homolog (mouse)			ISO	19	35,530,557	35,533,249	RGD:1624291	RGD
G	Atm	ataxia telangiectasia mutated			IEA	8	56,894,746	56,996,565	RGD:1600115	InterPro
G	Blm	Bloom syndrome, RecQ helicase-like			ISO	1	136,271,573	136,358,077	RGD:1624291	RGD
G	Blm	Bloom syndrome, RecQ helicase-like			IEA	1	136,271,573	136,358,077	RGD:1600115	ENSEMBL
G	Ctc1	CTS telomere maintenance complex component 1			IEA	10	55,768,182	55,788,836	RGD:1600115	ENSEMBL
G	Ctc1	CTS telomere maintenance complex component 1			ISO	10	55,768,182	55,788,836	RGD:1624291	RGD
G	Dclre1b	DNA cross-link repair 1B			ISS	2	199,025,718	199,034,230	RGD:1600115	UniProtKB
G	Dclre1b	DNA cross-link repair 1B			ISO	2	199,025,718	199,034,230	RGD:1624291	RGD
G	Dclre1c	DNA cross-link repair 1C			ISO	17	85,896,581	85,928,644	RGD:1624291	RGD
G	Dclre1c	DNA cross-link repair 1C			IEA	17	85,896,581	85,928,644	RGD:1600115	ENSEMBL
G	Ercc4	excision repair cross-complementing rodent repair deficiency, complementation group 4			ISO	10	2,144,262	2,177,554	RGD:1624291	RGD
G	Fbxo4	F-box protein 4			ISO	2	53,871,746	53,884,722	RGD:1624291	RGD
G	Hspa1a	heat shock protein 1A			ISO	20	3,945,716	3,959,552	RGD:1624291	RGD
G	Hspa1b	heat shock protein 1B			ISO	20	3,955,274	3,957,748	RGD:1624291	RGD
G	Mre11a	MRE11 meiotic recombination 11 homolog A (S. cerevisiae)			TAS	8	11,588,409	11,632,483	RGD:68816	RGD
G	Nbn	nibrin			TAS	5	30,541,610	30,576,168	RGD:68816	RGD
G	Nbn	nibrin			ISO	5	30,541,610	30,576,168	RGD:1624291	RGD
G	Nbn	nibrin			IEA	5	30,541,610	30,576,168	RGD:1600115	ENSEMBL
G	Nbn	nibrin			ISS	5	30,541,610	30,576,168	RGD:1600115	UniProtKB
G	Obfc1	oligonucleotide/oligosaccharide-binding fold containing 1			ISO	1	252,875,485	252,909,299	RGD:1624291	RGD
G	Obfc1	oligonucleotide/oligosaccharide-binding fold containing 1			ISS	1	252,875,485	252,909,299	RGD:1600115	UniProtKB
G	Parp1	poly (ADP-ribose) polymerase 1			ISO	13	96,309,670	96,341,486	RGD:1624291	RGD
G	Parp1	poly (ADP-ribose) polymerase 1			IEA	13	96,309,670	96,341,486	RGD:1600115	ENSEMBL
G	Pot1	protection of telomeres 1			IEA	4	52,233,404	52,289,574	RGD:1600115	InterPro
G	Pot1b	protection of telomeres 1B			IEA				RGD:1600115	InterPro
G	Prkdc	protein kinase, DNA activated, catalytic polypeptide			ISO	11	86,951,420	87,169,229	RGD:1624291	RGD
G	Rad50	RAD50 homolog (S. cerevisiae)			TAS	10	39,112,733	39,164,694	RGD:68816	RGD
G	Rtel1	regulator of telomere elongation helicase 1			ISO	3	170,461,613	170,496,959	RGD:1624291	RGD
G	Rtel1	regulator of telomere elongation helicase 1			ISS	3	170,461,613	170,496,959	RGD:1600115	UniProtKB
G	Smg6	Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)			ISO	10	62,234,450	62,470,611	RGD:1624291	RGD
G	Sp100	SP100 nuclear antigen			ISO	9	84,374,288	84,409,976	RGD:1624291	RGD
G	Terc	telomerase RNA component			ISO	2	117,234,446	117,234,833	RGD:1624291	RGD
G	Terc	telomerase RNA component			ISO	2	117,234,446	117,234,833	RGD:1624291	RGD
G	Terc	telomerase RNA component			ISO	2	117,234,446	117,234,833	RGD:1624291	RGD
G	Terf2	telomeric repeat binding factor 2			ISO	19	36,930,490	36,958,589	RGD:1624291	RGD
G	Terf2	telomeric repeat binding factor 2			ISO	19	36,930,490	36,958,589	RGD:1624291	RGD
G	Terf2ip	telomeric repeat binding factor 2, interacting protein			ISO	19	41,946,621	41,954,910	RGD:1624291	RGD
G	Tnks2	tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2		NOT	ISO	1	241,112,141	241,164,804	RGD:1624291	RGD
G	Tnks2	tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2		NOT	ISO	1	241,112,141	241,164,804	RGD:1624291	RGD
G	Wrn	Werner syndrome, RecQ helicase-like			ISO	16	62,535,144	62,668,700	RGD:1624291	RGD
G	Wrn	Werner syndrome, RecQ helicase-like			ISO	16	62,535,144	62,668,700	RGD:1624291	RGD
G	Wrn	Werner syndrome, RecQ helicase-like			ISO	16	62,535,144	62,668,700	RGD:1624291	RGD
G	Wrn	Werner syndrome, RecQ helicase-like			ISO	16	62,535,144	62,668,700	RGD:1624291	RGD
G	Xrcc5	X-ray repair complementing defective repair in Chinese hamster cells 5			IEA	9	71,472,459	71,581,936	RGD:1600115	InterPro
G	Xrcc6	X-ray repair complementing defective repair in Chinese hamster cells 6			IEA	7	120,401,944	120,422,923	RGD:1600115	InterPro
telomere maintenance in response to DNA damage
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Pot1b	protection of telomeres 1B			ISO				RGD:1624291	RGD
telomere maintenance via recombination
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Nsmce2	non-SMC element 2, MMS21 homolog (S. cerevisiae)			ISO	7	96,167,635	96,393,594	RGD:1624291	RGD
G	Nsmce2	non-SMC element 2, MMS21 homolog (S. cerevisiae)			ISS	7	96,167,635	96,393,594	RGD:1600115	UniProtKB
G	Smc5	structural maintenance of chromosomes 5			IEA	1	226,494,137	226,566,143	RGD:1600115	ENSEMBL
G	Smc5	structural maintenance of chromosomes 5			ISO	1	226,494,137	226,566,143	RGD:1624291	RGD
G	Smc6	structural maintenance of chromosomes 6			IEA	6	34,710,177	34,763,158	RGD:1600115	ENSEMBL
G	Smc6	structural maintenance of chromosomes 6			ISO	6	34,710,177	34,763,158	RGD:1624291	RGD
G	Tep1	telomerase associated protein 1			ISO	15	26,802,624	26,852,308	RGD:1624291	RGD
telomere maintenance via telomerase
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Acd	adrenocortical dysplasia homolog (mouse)			IEA	19	35,530,557	35,533,249	RGD:1600115	InterPro
G	Pinx1	PIN2/TERF1 interacting, telomerase inhibitor 1			IEA	15	43,124,973	43,184,374	RGD:1600115	ENSEMBL
G	Pinx1	PIN2/TERF1 interacting, telomerase inhibitor 1			ISO	15	43,124,973	43,184,374	RGD:1624291	RGD
G	Pot1	protection of telomeres 1			ISO	4	52,233,404	52,289,574	RGD:1624291	RGD
G	Rad50	RAD50 homolog (S. cerevisiae)			ISO	10	39,112,733	39,164,694	RGD:1624291	RGD
G	Rad50	RAD50 homolog (S. cerevisiae)			IEA	10	39,112,733	39,164,694	RGD:1600115	ENSEMBL
G	Rad50	RAD50 homolog (S. cerevisiae)			ISS	10	39,112,733	39,164,694	RGD:1600115	UniProtKB
G	Tep1	telomerase associated protein 1		NOT	ISO	15	26,802,624	26,852,308	RGD:1624291	RGD
G	Terc	telomerase RNA component			TAS	2	117,234,446	117,234,833	RGD:1299555	RGD
G	Terc	telomerase RNA component			ISO	2	117,234,446	117,234,833	RGD:1624291	RGD
G	Terf1	telomeric repeat binding factor (NIMA-interacting) 1			ISO	5	2,556,918	2,586,086	RGD:1624291	RGD
G	Tert	telomerase reverse transcriptase			ISO	1	30,445,180	30,465,942	RGD:1624291	RGD
G	Tert	telomerase reverse transcriptase			IEA	1	30,445,180	30,465,942	RGD:1600115	ENSEMBL
telomere maintenance via telomere lengthening
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Ctc1	CTS telomere maintenance complex component 1			ISO	10	55,768,182	55,788,836	RGD:1624291	RGD
G	Obfc1	oligonucleotide/oligosaccharide-binding fold containing 1			ISO	1	252,875,485	252,909,299	RGD:1624291	RGD
G	Obfc1	oligonucleotide/oligosaccharide-binding fold containing 1			ISS	1	252,875,485	252,909,299	RGD:1600115	UniProtKB
G	Terf2ip	telomeric repeat binding factor 2, interacting protein