Gene: Srrm2 (serine/arginine repetitive matrix 2)
Rattus norvegicus |
| Symbol: |
Srrm2
|
| Name: |
serine/arginine repetitive matrix 2
|
| Description: |
INTERACTS WITH 2,4-dinitrotoluene; diuron; 17beta-estradiol (ortholog) |
| Type: |
protein-coding
|
| RefSeq Status: |
VALIDATED
|
| Also known as: |
LOC302969; serine/arginine repetitive matrix 2; serine/arginine repetitive matrix 2 (predicted); serine/arginine repetitive matrix protein 2; Srrm2_predicted
|
| Latest Assembly: |
RGSC Genome Assembly v3.4
|
| Position: |
| Map | Chr | Position | Strand | Source |
|---|
Rat Cytogenetic Map | 10 | q12 | | NCBI | RGSC Genome Assembly v5.0 | 10 | 12,948,282 - 12,982,936 | + | NCBI | RGSC Genome Assembly v3.4 | 10 | 13,066,871 - 13,081,983 | + | NCBI | Rat Celera Assembly | 10 | 12,522,113 - 12,543,685 | + | NCBI | Genome Assembly 3.1 | 10 | 13,051,311 - 13,084,720 | + | NCBI |
|
| Model |
|
|
 Gene-Chemical Interaction Annotations
References - curated References - uncurated Genomics
Position Markers
| RH129535 |
| Map | Chr | Position | Strand | Source |
|---|
Rat Cytogenetic Map | 10 | q12 | | UniSTS | RGSC Genome Assembly v5.0 | 10 | 12,982,650 - 12,982,861 | | UniSTS | RGSC Genome Assembly v3.4 | 10 | 13,084,446 - 13,084,657 | | UniSTS | Rat Celera Assembly | 10 | 12,543,399 - 12,543,610 | | UniSTS | RH 3.4 | 10 | 143.67 | | UniSTS |
|
| BF403722 |
| Map | Chr | Position | Strand | Source |
|---|
Rat Cytogenetic Map | 10 | q12 | | UniSTS | RGSC Genome Assembly v5.0 | 10 | 12,974,797 - 12,975,010 | | UniSTS | RGSC Genome Assembly v3.4 | 10 | 13,076,593 - 13,076,806 | | UniSTS | Rat Celera Assembly | 10 | 12,535,546 - 12,535,759 | | UniSTS |
|
| RH137181 |
| Map | Chr | Position | Strand | Source |
|---|
Rat Cytogenetic Map | 10 | q12 | | UniSTS | RGSC Genome Assembly v5.0 | 10 | 12,982,672 - 12,982,860 | | UniSTS | RGSC Genome Assembly v3.4 | 10 | 13,084,468 - 13,084,656 | | UniSTS | Rat Celera Assembly | 10 | 12,543,421 - 12,543,609 | | UniSTS |
|
| AU049834 |
| Map | Chr | Position | Strand | Source |
|---|
Rat Cytogenetic Map | 10 | q12 | | UniSTS | RGSC Genome Assembly v5.0 | 10 | 12,956,525 - 12,956,821 | | UniSTS | RGSC Genome Assembly v3.4 | 10 | 13,059,511 - 13,059,807 | | UniSTS | Rat Celera Assembly | 10 | 12,518,669 - 12,518,967 | | UniSTS |
|
| MARC_7863-7864:996688108:1 |
| Map | Chr | Position | Strand | Source |
|---|
Rat Cytogenetic Map | 10 | q12 | | UniSTS | RGSC Genome Assembly v5.0 | 10 | 12,966,478 - 12,967,639 | | UniSTS | RGSC Genome Assembly v3.4 | 10 | 13,068,273 - 13,069,435 | | UniSTS | Rat Celera Assembly | 10 | 12,527,351 - 12,528,512 | | UniSTS |
|
| TCEB2_3482 |
| Map | Chr | Position | Strand | Source |
|---|
Rat Cytogenetic Map | 10 | q12 | | UniSTS | RGSC Genome Assembly v5.0 | 10 | 12,982,899 - 12,983,193 | | UniSTS | RGSC Genome Assembly v3.4 | 10 | 13,084,695 - 13,084,989 | | UniSTS | Rat Celera Assembly | 10 | 12,543,648 - 12,543,942 | | UniSTS |
|
QTLs in Region (RGSC Genome Assembly v3.4)
| 2293680 | Bss40 | Bone structure and strength QTL 40 | 5.66 | .0001 | Bone strength | | 10 | 1 | 35460104 | Rat | | 634327 | Hc4 | Hypercalciuria QTL 4 | 2.4 | | Renal function | calcium excretion | 10 | 1 | 38576664 | Rat | | 1576304 | Schws7 | Schwannoma susceptibility QTL 7 | | .0115 | Neural tumor susceptibility | tumor incidence | 10 | 1 | 41641939 | Rat | | 631554 | Bp133 | Blood pressure QTL 133 | | .005 | Blood pressure | systolic | 10 | 666709 | 65072453 | Rat | | 1581497 | Esta1 | Estrogen-induced thymic atrophy QTL 1 | | | Gland mass | thymus | 10 | 4831560 | 67678060 | Rat | | 631828 | Alc5 | Alcohol consumption QTL 5 | 2.4 | | Consumption level | alcohol preference | 10 | 5090008 | 17515458 | Rat | | 737820 | Alc9 | Alcohol consumption QTL 9 | 2.2 | | Consumption level | alcohol preference | 10 | 5090008 | 19648894 | Rat | | 2313064 | Bmd71 | Bone mineral density QTL 71 | .9 | .0001 | Bone mineral density | | 10 | 5339759 | 21607865 | Rat | | 2313066 | Bss63 | Bone structure and strength QTL 63 | 1.4 | .0001 | Bone strength | | 10 | 5339759 | 21607865 | Rat | | 2313081 | Bss64 | Bone structure and strength QTL 64 | 1.3 | .0001 | Bone strength | | 10 | 5339759 | 21607865 | Rat | | 2313095 | Bss62 | Bone structure and strength QTL 62 | 1.5 | .0001 | Bone structure | | 10 | 5339759 | 21607865 | Rat | | 2313104 | Bss61 | Bone structure and strength QTL 61 | .9 | .0001 | Bone structure | | 10 | 5339759 | 21607865 | Rat | | 2298544 | Neuinf9 | Neuroinflammation QTL 9 | 4.6 | | Neuroinflammation | | 10 | 5761138 | 65668639 | Rat | | 631660 | Hcar1 | Hepatocarcinoma resistance QTL 1 | 3.4 | .0001 | Liver tumor resistance | nodule volume | 10 | 6172805 | 36254741 | Rat | | 61427 | Cia16 | Collagen induced arthritis QTL 16 | 3.2 | | Joint/bone inflammation | type II collagen induced | 10 | 6380753 | 100633982 | Rat | | 1578761 | Stresp21 | Stress response QTL 21 | 3.3 | | Stress response | thymus weight | 10 | 7041744 | 52041744 | Rat | | 2303118 | Mamtr7 | Mammary tumor resistance QTL 7 | | .003 | Mammary tumor resistance | | 10 | 9762188 | 108776963 | Rat | |
