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Gene: Chka (choline kinase alpha) Rattus norvegicus
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Symbol: Chka
Name: choline kinase alpha
Description: Exhibits ATP binding activity; choline binding activity; and kinase activity. Involved in several processes, including choline metabolic process; ethanolamine metabolic process; and response to 3-methylcholanthrene. Predicted to localize to the cytoplasm. Biomarker of colon cancer and transient cerebral ischemia. Orthologous to human CHKA (choline kinase alpha); PARTICIPATES IN glycerophospholipid metabolic pathway; INTERACTS WITH 1-naphthyl isothiocyanate; 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: CHETK-alpha; Chk; choline kinase; choline kinase R; CK; CK-R; EK; ethanolamine kinase; MGC93538
Orthologs:
Homo sapiens (human) : CHKA (choline kinase alpha)  HGNC  Alliance
Mus musculus (house mouse) : Chka (choline kinase alpha)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Chka (choline kinase alpha)
Pan paniscus (bonobo/pygmy chimpanzee) : CHKA (choline kinase alpha)
Canis lupus familiaris (dog) : CHKA (choline kinase alpha)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Chka (choline kinase alpha)
Sus scrofa (pig) : CHKA (choline kinase alpha)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01219,076,618 - 219,126,221 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01225,950,340 - 225,998,826 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41206,368,963 - 206,418,526 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11206,522,415 - 206,571,978 (+)NCBI
Celera1198,630,045 - 198,678,068 (+)NCBICelera
Cytogenetic Map1q43NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Chka
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 61944
Created: 2001-04-11
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.