CHKA (choline kinase alpha) - Rat Genome Database

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Gene: CHKA (choline kinase alpha) Canis lupus familiaris
Analyze
Symbol: CHKA
Name: choline kinase alpha
RGD ID: 12242272
Description: ENCODES a protein that exhibits ATP binding (ortholog); choline binding (ortholog); choline kinase activity (ortholog); INVOLVED IN cellular response to glucose starvation (ortholog); choline metabolic process (ortholog); ethanolamine metabolic process (ortholog); PARTICIPATES IN glycerophospholipid metabolic pathway; ASSOCIATED WITH Aicardi-Goutieres Syndrome 3 (ortholog); colon adenoma (ortholog); colon cancer (ortholog); FOUND IN cytosol (ortholog); lipid droplet (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11849,717,512 - 49,784,653 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1849,745,437 - 49,781,882 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1848,326,328 - 48,395,961 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01850,633,890 - 50,707,854 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1850,633,254 - 50,704,171 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11849,851,764 - 49,917,733 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01849,426,624 - 49,492,553 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01850,219,763 - 50,289,786 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytosol  (IEA,ISO)
lipid droplet  (ISO)

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
CHKA
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11849,717,512 - 49,784,653 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1849,745,437 - 49,781,882 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1848,326,328 - 48,395,961 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01850,633,890 - 50,707,854 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1850,633,254 - 50,704,171 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11849,851,764 - 49,917,733 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01849,426,624 - 49,492,553 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01850,219,763 - 50,289,786 (+)NCBIUU_Cfam_GSD_1.0
CHKA
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381168,052,859 - 68,121,388 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1168,052,859 - 68,121,444 (-)EnsemblGRCh38hg38GRCh38
GRCh371167,820,326 - 67,888,855 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361167,576,902 - 67,645,434 (-)NCBINCBI36Build 36hg18NCBI36
Celera1165,154,000 - 65,222,386 (-)NCBICelera
Cytogenetic Map11q13.2NCBI
HuRef1164,155,675 - 64,231,363 (-)NCBIHuRef
CHM1_11167,704,080 - 67,773,223 (-)NCBICHM1_1
T2T-CHM13v2.01168,056,500 - 68,125,033 (-)NCBIT2T-CHM13v2.0
Chka
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39193,901,585 - 3,944,368 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl193,901,773 - 3,944,369 (+)EnsemblGRCm39 Ensembl
GRCm38193,851,585 - 3,894,369 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl193,851,773 - 3,894,369 (+)EnsemblGRCm38mm10GRCm38
MGSCv37193,851,773 - 3,894,367 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36193,851,773 - 3,894,369 (+)NCBIMGSCv36mm8
Celera193,732,122 - 3,774,742 (+)NCBICelera
Cytogenetic Map19ANCBI
cM Map193.57NCBI
Chka
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81210,506,069 - 210,554,753 (+)NCBIGRCr8
mRatBN7.21201,076,804 - 201,125,517 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1201,076,860 - 201,125,516 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1209,450,243 - 209,498,722 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01216,538,854 - 216,587,504 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01209,213,056 - 209,261,706 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01219,076,618 - 219,126,221 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1219,077,771 - 219,126,220 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01225,950,340 - 225,998,826 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41206,368,963 - 206,418,526 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11206,522,415 - 206,571,978 (+)NCBI
Celera1198,630,045 - 198,678,068 (+)NCBICelera
Cytogenetic Map1q43NCBI
Chka
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542217,710,434 - 17,766,256 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542217,710,981 - 17,766,256 (+)NCBIChiLan1.0ChiLan1.0
CHKA
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2969,003,455 - 69,071,569 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11170,046,717 - 70,114,782 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01163,134,776 - 63,202,516 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11166,443,275 - 66,486,517 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1166,444,406 - 66,510,221 (-)Ensemblpanpan1.1panPan2
Chka
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049475,589,711 - 5,626,074 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365992,001,673 - 2,067,399 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365992,031,953 - 2,068,423 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CHKA
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl24,788,213 - 4,846,665 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.124,788,508 - 4,846,667 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.223,416,315 - 3,474,471 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CHKA
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.116,411,606 - 6,482,508 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666038103,689,653 - 103,760,737 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Chka
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476718,744,547 - 18,807,352 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476718,744,647 - 18,807,352 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in CHKA
696 total Variants

Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 22 16 6 6 6 6 33 22 12 14 10

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_014121093 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014121094 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014121095 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014121097 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022405582 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022405584 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022405585 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022405586 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424772 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424773 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424774 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424775 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424776 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424777 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424778 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424779 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424780 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424781 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038454068 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038454069 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038454070 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038454071 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038454072 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038501024 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038563711 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038563712 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038563714 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038563715 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038563716 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038563717 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038563718 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038563719 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038563720 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038563721 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038627833 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_533210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005296630 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005311692 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005373586 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000018 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000214 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000037 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000176 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000018 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCAFT00000037523   ⟹   ENSCAFP00000033052
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1849,745,549 - 49,781,882 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000083131   ⟹   ENSCAFP00000061583
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1849,745,549 - 49,781,882 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000083336   ⟹   ENSCAFP00000043763
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1849,745,437 - 49,776,716 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845014673   ⟹   ENSCAFP00845011367
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1850,633,254 - 50,704,171 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845014734   ⟹   ENSCAFP00845011418
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1850,633,254 - 50,704,171 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845014793   ⟹   ENSCAFP00845011461
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1850,633,254 - 50,671,425 (+)Ensembl
RefSeq Acc Id: XM_014121093   ⟹   XP_013976568
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11849,717,597 - 49,782,932 (+)NCBI
Dog10K_Boxer_Tasha1848,326,873 - 48,392,270 (+)NCBI
Sequence:
RefSeq Acc Id: XM_014121094   ⟹   XP_013976569
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11849,734,068 - 49,782,932 (+)NCBI
Dog10K_Boxer_Tasha1848,343,201 - 48,392,270 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022405582   ⟹   XP_022261290
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11849,717,517 - 49,782,932 (+)NCBI
Dog10K_Boxer_Tasha1848,327,577 - 48,392,270 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022405585   ⟹   XP_022261293
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11849,717,519 - 49,782,932 (+)NCBI
Dog10K_Boxer_Tasha1848,327,577 - 48,392,270 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038424772   ⟹   XP_038280700
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01850,633,890 - 50,704,163 (+)NCBI
RefSeq Acc Id: XM_038424773   ⟹   XP_038280701
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01850,633,890 - 50,707,854 (+)NCBI
RefSeq Acc Id: XM_038424774   ⟹   XP_038280702
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01850,633,890 - 50,704,163 (+)NCBI
RefSeq Acc Id: XM_038424775   ⟹   XP_038280703
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01850,635,140 - 50,704,163 (+)NCBI
RefSeq Acc Id: XM_038424776   ⟹   XP_038280704
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01850,635,140 - 50,704,163 (+)NCBI
RefSeq Acc Id: XM_038424777   ⟹   XP_038280705
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01850,633,890 - 50,694,873 (+)NCBI
RefSeq Acc Id: XM_038424778   ⟹   XP_038280706
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01850,654,884 - 50,704,163 (+)NCBI
RefSeq Acc Id: XM_038424779   ⟹   XP_038280707
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01850,634,496 - 50,704,163 (+)NCBI
RefSeq Acc Id: XM_038424780   ⟹   XP_038280708
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01850,654,890 - 50,704,163 (+)NCBI
RefSeq Acc Id: XM_038424781   ⟹   XP_038280709
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01850,633,890 - 50,704,163 (+)NCBI
RefSeq Acc Id: XM_038454068   ⟹   XP_038309996
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1848,326,328 - 48,392,270 (+)NCBI
RefSeq Acc Id: XM_038454069   ⟹   XP_038309997
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1848,326,328 - 48,395,961 (+)NCBI
RefSeq Acc Id: XM_038454070   ⟹   XP_038309998
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1848,326,328 - 48,392,270 (+)NCBI
RefSeq Acc Id: XM_038454071   ⟹   XP_038309999
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1848,326,328 - 48,382,980 (+)NCBI
RefSeq Acc Id: XM_038454072   ⟹   XP_038310000
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1848,326,328 - 48,392,270 (+)NCBI
RefSeq Acc Id: XM_038501024   ⟹   XP_038356952
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11849,851,764 - 49,917,733 (+)NCBI
RefSeq Acc Id: XM_038563711   ⟹   XP_038419639
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01850,219,763 - 50,286,095 (+)NCBI
RefSeq Acc Id: XM_038563712   ⟹   XP_038419640
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01850,219,763 - 50,289,786 (+)NCBI
RefSeq Acc Id: XM_038563714   ⟹   XP_038419642
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01850,219,763 - 50,286,095 (+)NCBI
RefSeq Acc Id: XM_038563715   ⟹   XP_038419643
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01850,221,016 - 50,286,095 (+)NCBI
RefSeq Acc Id: XM_038563716   ⟹   XP_038419644
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01850,221,016 - 50,286,095 (+)NCBI
RefSeq Acc Id: XM_038563717   ⟹   XP_038419645
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01850,219,763 - 50,276,803 (+)NCBI
RefSeq Acc Id: XM_038563718   ⟹   XP_038419646
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01850,236,791 - 50,286,095 (+)NCBI
RefSeq Acc Id: XM_038563719   ⟹   XP_038419647
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01850,220,366 - 50,286,095 (+)NCBI
RefSeq Acc Id: XM_038563720   ⟹   XP_038419648
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01850,236,797 - 50,286,095 (+)NCBI
RefSeq Acc Id: XM_038563721   ⟹   XP_038419649
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01850,219,763 - 50,286,095 (+)NCBI
RefSeq Acc Id: XM_038627833   ⟹   XP_038483761
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01849,426,624 - 49,492,553 (+)NCBI
RefSeq Acc Id: XM_533210   ⟹   XP_533210
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11849,734,068 - 49,782,932 (+)NCBI
Dog10K_Boxer_Tasha1848,343,195 - 48,392,270 (+)NCBI
Sequence:
RefSeq Acc Id: XR_005296630
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01850,633,890 - 50,696,326 (+)NCBI
RefSeq Acc Id: XR_005311692
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1848,326,328 - 48,384,433 (+)NCBI
RefSeq Acc Id: XR_005373586
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01850,219,763 - 50,278,256 (+)NCBI
Protein Sequences
Protein RefSeqs XP_013976568 (Get FASTA)   NCBI Sequence Viewer  
  XP_013976569 (Get FASTA)   NCBI Sequence Viewer  
  XP_022261290 (Get FASTA)   NCBI Sequence Viewer  
  XP_022261293 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280700 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280701 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280702 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280703 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280704 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280705 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280706 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280707 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280708 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280709 (Get FASTA)   NCBI Sequence Viewer  
  XP_038309996 (Get FASTA)   NCBI Sequence Viewer  
  XP_038309997 (Get FASTA)   NCBI Sequence Viewer  
  XP_038309998 (Get FASTA)   NCBI Sequence Viewer  
  XP_038309999 (Get FASTA)   NCBI Sequence Viewer  
  XP_038310000 (Get FASTA)   NCBI Sequence Viewer  
  XP_038356952 (Get FASTA)   NCBI Sequence Viewer  
  XP_038419639 (Get FASTA)   NCBI Sequence Viewer  
  XP_038419640 (Get FASTA)   NCBI Sequence Viewer  
  XP_038419642 (Get FASTA)   NCBI Sequence Viewer  
  XP_038419643 (Get FASTA)   NCBI Sequence Viewer  
  XP_038419644 (Get FASTA)   NCBI Sequence Viewer  
  XP_038419645 (Get FASTA)   NCBI Sequence Viewer  
  XP_038419646 (Get FASTA)   NCBI Sequence Viewer  
  XP_038419647 (Get FASTA)   NCBI Sequence Viewer  
  XP_038419648 (Get FASTA)   NCBI Sequence Viewer  
  XP_038419649 (Get FASTA)   NCBI Sequence Viewer  
  XP_038483761 (Get FASTA)   NCBI Sequence Viewer  
  XP_533210 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000033052.4
  ENSCAFP00000061583.2
  ENSCAFP00000072307.1
  ENSCAFP00040014317.1
  ENSCAFP00040014355.1
  ENSCAFP00845011367
  ENSCAFP00845011367.1
  ENSCAFP00845011418
  ENSCAFP00845011418.1
  ENSCAFP00845011461.1
RefSeq Acc Id: XP_013976568   ⟸   XM_014121093
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_533210   ⟸   XM_533210
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_013976569   ⟸   XM_014121094
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_022261290   ⟸   XM_022405582
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_022261293   ⟸   XM_022405585
- Peptide Label: isoform X7
- Sequence:
Ensembl Acc Id: ENSCAFP00000043763   ⟸   ENSCAFT00000083336
Ensembl Acc Id: ENSCAFP00000061583   ⟸   ENSCAFT00000083131
Ensembl Acc Id: ENSCAFP00000033052   ⟸   ENSCAFT00000037523
RefSeq Acc Id: XP_038356952   ⟸   XM_038501024
- Peptide Label: isoform X9
RefSeq Acc Id: XP_038483761   ⟸   XM_038627833
- Peptide Label: isoform X9
RefSeq Acc Id: XP_038280701   ⟸   XM_038424773
- Peptide Label: isoform X1
- UniProtKB: A0A8C0S154 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038280709   ⟸   XM_038424781
- Peptide Label: isoform X8
- UniProtKB: A0A8C0S154 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038280700   ⟸   XM_038424772
- Peptide Label: isoform X9
- UniProtKB: A0A8I3N8C3 (UniProtKB/TrEMBL),   A0A8P0NMI9 (UniProtKB/TrEMBL),   A0A8C0S154 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038280702   ⟸   XM_038424774
- Peptide Label: isoform X2
- UniProtKB: A0A8I3N5H8 (UniProtKB/TrEMBL),   A0A8P0TD97 (UniProtKB/TrEMBL),   A0A8C0YR55 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038280705   ⟸   XM_038424777
- Peptide Label: isoform X3
- UniProtKB: A0A8C0S154 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038280707   ⟸   XM_038424779
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038280703   ⟸   XM_038424775
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038280704   ⟸   XM_038424776
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038280706   ⟸   XM_038424778
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038280708   ⟸   XM_038424780
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038309997   ⟸   XM_038454069
- Peptide Label: isoform X1
- UniProtKB: A0A8C0S154 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038310000   ⟸   XM_038454072
- Peptide Label: isoform X8
- UniProtKB: A0A8C0S154 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038309996   ⟸   XM_038454068
- Peptide Label: isoform X9
- UniProtKB: A0A8I3N8C3 (UniProtKB/TrEMBL),   A0A8P0NMI9 (UniProtKB/TrEMBL),   A0A8C0S154 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038309998   ⟸   XM_038454070
- Peptide Label: isoform X2
- UniProtKB: A0A8I3N5H8 (UniProtKB/TrEMBL),   A0A8P0TD97 (UniProtKB/TrEMBL),   A0A8C0YR55 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038309999   ⟸   XM_038454071
- Peptide Label: isoform X3
- UniProtKB: A0A8C0S154 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038419640   ⟸   XM_038563712
- Peptide Label: isoform X1
- UniProtKB: A0A8C0S154 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038419649   ⟸   XM_038563721
- Peptide Label: isoform X8
- UniProtKB: A0A8C0S154 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038419639   ⟸   XM_038563711
- Peptide Label: isoform X9
- UniProtKB: A0A8C0S154 (UniProtKB/TrEMBL),   A0A8I3N8C3 (UniProtKB/TrEMBL),   A0A8P0NMI9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038419642   ⟸   XM_038563714
- Peptide Label: isoform X2
- UniProtKB: A0A8C0YR55 (UniProtKB/TrEMBL),   A0A8I3N5H8 (UniProtKB/TrEMBL),   A0A8P0TD97 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038419645   ⟸   XM_038563717
- Peptide Label: isoform X3
- UniProtKB: A0A8C0S154 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038419647   ⟸   XM_038563719
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038419643   ⟸   XM_038563715
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038419644   ⟸   XM_038563716
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038419646   ⟸   XM_038563718
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038419648   ⟸   XM_038563720
- Peptide Label: isoform X6
Ensembl Acc Id: ENSCAFP00845011418   ⟸   ENSCAFT00845014734
Ensembl Acc Id: ENSCAFP00845011367   ⟸   ENSCAFT00845014673
Ensembl Acc Id: ENSCAFP00845011461   ⟸   ENSCAFT00845014793


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000010937 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00040008751 UniProtKB/TrEMBL
  ENSCAFG00845008304 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000037523.4 UniProtKB/TrEMBL
  ENSCAFT00000083131.2 UniProtKB/TrEMBL
  ENSCAFT00000097582.1 UniProtKB/TrEMBL
  ENSCAFT00040016520.1 UniProtKB/TrEMBL
  ENSCAFT00040016561.1 UniProtKB/TrEMBL
  ENSCAFT00845014673 ENTREZGENE
  ENSCAFT00845014673.1 UniProtKB/TrEMBL
  ENSCAFT00845014734 ENTREZGENE
  ENSCAFT00845014734.1 UniProtKB/TrEMBL
  ENSCAFT00845014793.1 UniProtKB/TrEMBL
Gene3D-CATH 3.90.1200.10 UniProtKB/TrEMBL
InterPro Kinase-like_dom_sf UniProtKB/TrEMBL
NCBI Gene CHKA ENTREZGENE
PANTHER CHOLINE KINASE ALPHA UniProtKB/TrEMBL
  CHOLINE/ETHANOALAMINE KINASE UniProtKB/TrEMBL
Pfam Choline_kinase UniProtKB/TrEMBL
PRINTS PRICHEXTENSN UniProtKB/TrEMBL
  WILMSTUMOUR UniProtKB/TrEMBL
Superfamily-SCOP SSF56112 UniProtKB/TrEMBL
UniProt A0A8C0S154 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0YR55 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3N5H8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3N8C3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3N8U3_CANLF UniProtKB/TrEMBL
  A0A8P0NMI9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0PN93_CANLF UniProtKB/TrEMBL
  A0A8P0TD97 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:39218 ENTREZGENE