CHKA (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 18 | 49,717,512 - 49,784,653 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 18 | 49,745,437 - 49,781,882 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 18 | 48,326,328 - 48,395,961 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 18 | 50,633,890 - 50,707,854 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 18 | 50,633,254 - 50,704,171 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 18 | 49,851,764 - 49,917,733 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 18 | 49,426,624 - 49,492,553 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 18 | 50,219,763 - 50,289,786 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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CHKA (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 11 | 68,052,859 - 68,121,388 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 11 | 68,052,859 - 68,121,444 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 11 | 67,820,326 - 67,888,855 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 11 | 67,576,902 - 67,645,434 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 11 | 65,154,000 - 65,222,386 (-) | NCBI | | Celera | | | Cytogenetic Map | 11 | q13.2 | NCBI | | | | | HuRef | 11 | 64,155,675 - 64,231,363 (-) | NCBI | | HuRef | | | CHM1_1 | 11 | 67,704,080 - 67,773,223 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 11 | 68,056,500 - 68,125,033 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Chka (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 19 | 3,901,585 - 3,944,368 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 19 | 3,901,773 - 3,944,369 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 19 | 3,851,585 - 3,894,369 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 19 | 3,851,773 - 3,894,369 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 19 | 3,851,773 - 3,894,367 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 19 | 3,851,773 - 3,894,369 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 19 | 3,732,122 - 3,774,742 (+) | NCBI | | Celera | | | Cytogenetic Map | 19 | A | NCBI | | | | | cM Map | 19 | 3.57 | NCBI | | | | |
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Chka (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 1 | 210,506,069 - 210,554,753 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 1 | 201,076,804 - 201,125,517 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 1 | 201,076,860 - 201,125,516 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 1 | 209,450,243 - 209,498,722 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 1 | 216,538,854 - 216,587,504 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 1 | 209,213,056 - 209,261,706 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 1 | 219,076,618 - 219,126,221 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 1 | 219,077,771 - 219,126,220 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 1 | 225,950,340 - 225,998,826 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 1 | 206,368,963 - 206,418,526 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 1 | 206,522,415 - 206,571,978 (+) | NCBI | | | | | Celera | 1 | 198,630,045 - 198,678,068 (+) | NCBI | | Celera | | | Cytogenetic Map | 1 | q43 | NCBI | | | | |
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Chka (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955422 | 17,710,434 - 17,766,256 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955422 | 17,710,981 - 17,766,256 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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CHKA (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 9 | 69,003,455 - 69,071,569 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 11 | 70,046,717 - 70,114,782 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 11 | 63,134,776 - 63,202,516 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 11 | 66,443,275 - 66,486,517 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 11 | 66,444,406 - 66,510,221 (-) | Ensembl | panpan1.1 | | panPan2 | |
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Chka (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024404947 | 5,589,711 - 5,626,074 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936599 | 2,001,673 - 2,067,399 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936599 | 2,031,953 - 2,068,423 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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CHKA (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 2 | 4,788,213 - 4,846,665 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 2 | 4,788,508 - 4,846,667 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 2 | 3,416,315 - 3,474,471 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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CHKA (Chlorocebus sabaeus - green monkey) |
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Chka (Heterocephalus glaber - naked mole-rat) |
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