SLC27A1 (solute carrier family 27 member 1) - Rat Genome Database

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Gene: SLC27A1 (solute carrier family 27 member 1) Homo sapiens
Analyze
Symbol: SLC27A1
Name: solute carrier family 27 member 1
RGD ID: 1604940
HGNC Page HGNC:10995
Description: Enables biotin transmembrane transporter activity; efflux transmembrane transporter activity; and long-chain fatty acid transmembrane transporter activity. Involved in several processes, including glycerophospholipid biosynthetic process; lipid transport across blood-brain barrier; and monocarboxylic acid transport. Located in plasma membrane.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: ACSVL5; arachidonate--CoA ligase; FATP; FATP-1; FATP1; fatty acid transport protein 1; FLJ00336; long-chain fatty acid transport protein 1; long-chain-fatty-acid--CoA ligase; MGC71751; solute carrier family 27 (fatty acid transporter), member 1; very long-chain acyl-CoA synthetase
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381917,468,767 - 17,506,168 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1917,468,769 - 17,506,168 (+)EnsemblGRCh38hg38GRCh38
GRCh371917,581,333 - 17,616,977 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361917,442,300 - 17,477,977 (+)NCBINCBI36Build 36hg18NCBI36
Celera1917,482,907 - 17,518,593 (+)NCBICelera
Cytogenetic Map19p13.11NCBI
HuRef1917,146,725 - 17,182,058 (+)NCBIHuRef
CHM1_11917,580,668 - 17,616,359 (+)NCBICHM1_1
T2T-CHM13v2.01917,602,871 - 17,640,805 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (ISO)
1,1-dichloroethene  (ISO)
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-Ethylhexanoic acid  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
3,4-methylenedioxymethamphetamine  (ISO)
3-iodothyronamine  (EXP)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
3-methylcholanthrene  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (EXP)
4-hydroxyphenyl retinamide  (ISO)
5-aza-2'-deoxycytidine  (EXP)
6-(4-chlorophenyl)imidazo[2,1-b][1,3]thiazole-5-carbaldehyde O-(3,4-dichlorobenzyl)oxime  (EXP)
9-cis-retinoic acid  (EXP,ISO)
actinomycin D  (ISO)
aflatoxin B1  (EXP)
Aflatoxin B2 alpha  (EXP)
all-trans-retinoic acid  (ISO)
alpha-Zearalanol  (ISO)
ammonium chloride  (ISO)
anthra[1,9-cd]pyrazol-6(2H)-one  (ISO)
arsenite(3-)  (EXP)
atrazine  (ISO)
benzo[a]pyrene  (ISO)
beta-hexachlorocyclohexane  (ISO)
bexarotene  (ISO)
bezafibrate  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (EXP,ISO)
calcitriol  (EXP)
captan  (ISO)
cisplatin  (EXP)
clofibrate  (ISO)
copper(II) sulfate  (EXP)
DDE  (EXP)
dexamethasone  (ISO)
dextran sulfate  (ISO)
Dibutyl phosphate  (EXP)
dibutyl phthalate  (ISO)
diquat  (ISO)
doxorubicin  (EXP,ISO)
epoxiconazole  (ISO)
ethanol  (ISO)
farnesol  (EXP)
fenofibrate  (ISO)
flutamide  (ISO)
folic acid  (ISO)
folpet  (ISO)
FR900359  (EXP)
genistein  (ISO)
gentamycin  (ISO)
GW 4064  (EXP)
GW 7647  (EXP)
indometacin  (ISO)
inulin  (ISO)
ivermectin  (EXP)
lead(0)  (EXP,ISO)
lipopolysaccharide  (ISO)
Mesaconitine  (ISO)
methamphetamine  (ISO)
methotrexate  (EXP)
methoxychlor  (ISO)
mono(2-ethylhexyl) phthalate  (ISO)
Monobutylphthalate  (ISO)
monosodium L-glutamate  (ISO)
nickel atom  (EXP)
oleic acid  (EXP)
paracetamol  (ISO)
perfluorododecanoic acid  (ISO)
perfluorohexanesulfonic acid  (ISO)
perfluorononanoic acid  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (EXP,ISO)
perfluoroundecanoic acid  (ISO)
permethrin  (ISO)
phenformin  (ISO)
phenobarbital  (ISO)
pioglitazone  (ISO)
pirinixic acid  (ISO)
rebaudioside A  (ISO)
rifampicin  (ISO)
rotenone  (ISO)
silicon dioxide  (EXP)
sodium dodecyl sulfate  (EXP)
steviol  (ISO)
stevioside  (ISO)
streptozocin  (ISO)
sulfluramid  (EXP)
sulforaphane  (ISO)
tamoxifen  (ISO)
temozolomide  (EXP)
testosterone  (EXP)
tetrachloroethene  (ISO)
tetrachloromethane  (ISO)
titanium dioxide  (ISO)
tributylstannane  (ISO)
trichostatin A  (EXP)
urethane  (EXP)
valproic acid  (EXP,ISO)
vanadyl sulfate  (ISO)
vinclozolin  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)
zoledronic acid  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
References

References - curated
# Reference Title Reference Citation
1. Fatty acid transporter levels and palmitate oxidation rate correlate with ejection fraction in the infarcted rat heart. Heather LC, etal., Cardiovasc Res. 2006 Dec 1;72(3):430-7. Epub 2006 Sep 1.
2. Fiber type- and fatty acid composition-dependent effects of high-fat diets on rat muscle triacylglyceride and fatty acid transporter protein-1 content. Marotta M, etal., Metabolism. 2004 Aug;53(8):1032-6.
3. Intronic polymorphism in the fatty acid transport protein 1 gene is associated with increased plasma triglyceride levels in a French population. Meirhaeghe A, etal., Arterioscler Thromb Vasc Biol. 2000 May;20(5):1330-4.
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
5. FATP1 is an insulin-sensitive fatty acid transporter involved in diet-induced obesity. Wu Q, etal., Mol Cell Biol. 2006 May;26(9):3455-67.
Additional References at PubMed
PMID:7954810   PMID:9671728   PMID:10873384   PMID:12235169   PMID:12477932   PMID:12818409   PMID:15146197   PMID:15489334   PMID:15897321   PMID:15978856   PMID:18660489   PMID:19361580  
PMID:19523918   PMID:19913121   PMID:19946888   PMID:20356843   PMID:20360315   PMID:20416077   PMID:20628086   PMID:20965718   PMID:21395585   PMID:21873635   PMID:23024797   PMID:23528296  
PMID:24113382   PMID:24120574   PMID:24937540   PMID:25163924   PMID:25961023   PMID:26590417   PMID:26760575   PMID:26867681   PMID:28035674   PMID:28178239   PMID:28890335   PMID:29180619  
PMID:30199545   PMID:30280653   PMID:30674874   PMID:30970241   PMID:31091338   PMID:31575907   PMID:32457219   PMID:33486652   PMID:33961781   PMID:35575683   PMID:36215168   PMID:37314216  


Genomics

Comparative Map Data
SLC27A1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381917,468,767 - 17,506,168 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1917,468,769 - 17,506,168 (+)EnsemblGRCh38hg38GRCh38
GRCh371917,581,333 - 17,616,977 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361917,442,300 - 17,477,977 (+)NCBINCBI36Build 36hg18NCBI36
Celera1917,482,907 - 17,518,593 (+)NCBICelera
Cytogenetic Map19p13.11NCBI
HuRef1917,146,725 - 17,182,058 (+)NCBIHuRef
CHM1_11917,580,668 - 17,616,359 (+)NCBICHM1_1
T2T-CHM13v2.01917,602,871 - 17,640,805 (+)NCBIT2T-CHM13v2.0
Slc27a1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39872,021,372 - 72,039,951 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl872,021,526 - 72,039,946 (+)EnsemblGRCm39 Ensembl
GRCm38871,568,728 - 71,587,307 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl871,568,882 - 71,587,302 (+)EnsemblGRCm38mm10GRCm38
MGSCv37874,092,826 - 74,110,607 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36874,497,916 - 74,515,697 (+)NCBIMGSCv36mm8
Celera874,083,284 - 74,101,015 (+)NCBICelera
Cytogenetic Map8B3.3NCBI
cM Map834.43NCBI
Slc27a1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81618,311,859 - 18,337,024 (+)NCBIGRCr8
mRatBN7.21618,278,984 - 18,300,173 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1618,278,984 - 18,296,063 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1618,329,890 - 18,346,962 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01619,461,772 - 19,478,909 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01618,382,827 - 18,399,900 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01619,997,823 - 20,016,193 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1619,999,112 - 20,016,190 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01619,859,540 - 19,880,871 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41618,769,909 - 18,786,988 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11618,769,906 - 18,786,985 (+)NCBI
Celera1618,482,929 - 18,499,970 (+)NCBICelera
Cytogenetic Map16p14NCBI
Slc27a1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955524805,014 - 821,838 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955524803,793 - 821,920 (-)NCBIChiLan1.0ChiLan1.0
SLC27A1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22022,340,328 - 22,376,533 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11921,345,812 - 21,383,151 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01916,956,000 - 16,993,429 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11917,929,785 - 17,966,171 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1917,929,785 - 17,966,171 (+)Ensemblpanpan1.1panPan2
SLC27A1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12045,309,094 - 45,341,101 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2045,310,088 - 45,340,230 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2045,223,163 - 45,255,236 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02045,796,156 - 45,828,264 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2045,796,156 - 45,829,217 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12045,032,656 - 45,064,717 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02045,442,740 - 45,474,725 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02045,718,788 - 45,750,750 (-)NCBIUU_Cfam_GSD_1.0
Slc27a1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118203,877,674 - 203,901,327 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365963,427,874 - 3,449,489 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365963,426,807 - 3,451,259 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC27A1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl260,203,388 - 60,235,588 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1260,203,374 - 60,235,689 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2259,752,658 - 59,771,672 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SLC27A1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1615,967,126 - 15,995,039 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660743,430,291 - 3,458,931 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Slc27a1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624908531,308 - 549,990 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624908531,313 - 549,570 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in SLC27A1
39 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 19p13.11-q13.11(chr19:17176767-34924150)x3 copy number gain See cases [RCV000050635] Chr19:17176767..34924150 [GRCh38]
Chr19:17287576..35415054 [GRCh37]
Chr19:17148576..40106894 [NCBI36]
Chr19:19p13.11-q13.11		 pathogenic
GRCh38/hg38 19p13.12-q11(chr19:13974677-27839676)x3 copy number gain See cases [RCV000052912] Chr19:13974677..27839676 [GRCh38]
Chr19:14085489..28330584 [GRCh37]
Chr19:13946489..33022424 [NCBI36]
Chr19:19p13.12-q11		 pathogenic
GRCh38/hg38 19p13.2-q13.31(chr19:11227942-44626354)x3 copy number gain See cases [RCV000133888] Chr19:11227942..44626354 [GRCh38]
Chr19:11338618..45129651 [GRCh37]
Chr19:11199618..49821491 [NCBI36]
Chr19:19p13.2-q13.31		 pathogenic
GRCh38/hg38 19p13.12-12(chr19:15133594-24193591)x3 copy number gain See cases [RCV000136696] Chr19:15133594..24193591 [GRCh38]
Chr19:15244405..24376393 [GRCh37]
Chr19:15105405..24168233 [NCBI36]
Chr19:19p13.12-12		 pathogenic|likely pathogenic
GRCh38/hg38 19p13.11(chr19:17308207-17705382)x1 copy number loss See cases [RCV000141610] Chr19:17308207..17705382 [GRCh38]
Chr19:17419016..17816191 [GRCh37]
Chr19:17280016..17677191 [NCBI36]
Chr19:19p13.11		 uncertain significance
GRCh38/hg38 19p13.11(chr19:17246895-17730147)x1 copy number loss See cases [RCV000143571] Chr19:17246895..17730147 [GRCh38]
Chr19:17357704..17840956 [GRCh37]
Chr19:17218704..17701956 [NCBI36]
Chr19:19p13.11		 uncertain significance
GRCh37/hg19 19p13.11(chr19:17514059-17899363)x3 copy number gain See cases [RCV000240346] Chr19:17514059..17899363 [GRCh37]
Chr19:19p13.11		 uncertain significance
NM_198580.3(SLC27A1):c.643C>T (p.Pro215Ser) single nucleotide variant not specified [RCV004321179] Chr19:17487254 [GRCh38]
Chr19:17598063 [GRCh37]
Chr19:19p13.11		 uncertain significance
GRCh37/hg19 19p13.11-11(chr19:16526787-24631604)x3 copy number gain not provided [RCV000752593] Chr19:16526787..24631604 [GRCh37]
Chr19:19p13.11-11		 pathogenic
GRCh37/hg19 19p13.12-13.11(chr19:15970389-17893528)x1 copy number loss not provided [RCV000487468] Chr19:15970389..17893528 [GRCh37]
Chr19:19p13.12-13.11		 pathogenic
GRCh37/hg19 19p13.11(chr19:17325373-17840956)x1 copy number loss See cases [RCV000511154] Chr19:17325373..17840956 [GRCh37]
Chr19:19p13.11		 uncertain significance
GRCh37/hg19 19p13.3-q13.43(chr19:260912-58956888)x3 copy number gain See cases [RCV000511289] Chr19:260912..58956888 [GRCh37]
Chr19:19p13.3-q13.43		 pathogenic|uncertain significance
GRCh37/hg19 19p13.3-q13.43(chr19:260912-58956888) copy number gain See cases [RCV000512296] Chr19:260912..58956888 [GRCh37]
Chr19:19p13.3-q13.43		 pathogenic
NM_198580.3(SLC27A1):c.1805C>T (p.Thr602Met) single nucleotide variant not specified [RCV004297408] Chr19:17504476 [GRCh38]
Chr19:17615285 [GRCh37]
Chr19:19p13.11		 uncertain significance
GRCh37/hg19 19p13.3-q13.43(chr19:260912-59097160)x3 copy number gain not provided [RCV000752444] Chr19:260912..59097160 [GRCh37]
Chr19:19p13.3-q13.43		 pathogenic
GRCh37/hg19 19p13.3-q13.43(chr19:68029-59110290)x3 copy number gain not provided [RCV000752439] Chr19:68029..59110290 [GRCh37]
Chr19:19p13.3-q13.43		 pathogenic
NM_198580.3(SLC27A1):c.702G>A (p.Gln234=) single nucleotide variant not provided [RCV000881264] Chr19:17487313 [GRCh38]
Chr19:17598122 [GRCh37]
Chr19:19p13.11		 benign
NM_198580.3(SLC27A1):c.453G>A (p.Ala151=) single nucleotide variant not provided [RCV000964387] Chr19:17486848 [GRCh38]
Chr19:17597657 [GRCh37]
Chr19:19p13.11		 benign
NM_198580.3(SLC27A1):c.1614C>T (p.Ala538=) single nucleotide variant not provided [RCV000892329] Chr19:17500854 [GRCh38]
Chr19:17611663 [GRCh37]
Chr19:19p13.11		 benign
NM_198580.3(SLC27A1):c.1934C>T (p.Ala645Val) single nucleotide variant not provided [RCV000887269] Chr19:17504605 [GRCh38]
Chr19:17615414 [GRCh37]
Chr19:19p13.11		 benign
NM_198580.3(SLC27A1):c.887-6C>A single nucleotide variant not provided [RCV000962699] Chr19:17489002 [GRCh38]
Chr19:17599811 [GRCh37]
Chr19:19p13.11		 benign
NM_198580.3(SLC27A1):c.179T>C (p.Val60Ala) single nucleotide variant not specified [RCV004298213] Chr19:17486574 [GRCh38]
Chr19:17597383 [GRCh37]
Chr19:19p13.11		 uncertain significance
NM_198580.3(SLC27A1):c.794+8G>A single nucleotide variant not provided [RCV000901790] Chr19:17487537 [GRCh38]
Chr19:17598346 [GRCh37]
Chr19:19p13.11		 benign
NM_198580.3(SLC27A1):c.896T>A (p.Ile299Asn) single nucleotide variant not specified [RCV004683636] Chr19:17489017 [GRCh38]
Chr19:17599826 [GRCh37]
Chr19:19p13.11		 uncertain significance
GRCh37/hg19 19p13.12-12(chr19:14286624-20956753)x3 copy number gain not provided [RCV001259370] Chr19:14286624..20956753 [GRCh37]
Chr19:19p13.12-12		 pathogenic
NM_198580.3(SLC27A1):c.1477G>A (p.Val493Met) single nucleotide variant not specified [RCV004310193] Chr19:17500717 [GRCh38]
Chr19:17611526 [GRCh37]
Chr19:19p13.11		 uncertain significance
NM_198580.3(SLC27A1):c.1579G>A (p.Val527Met) single nucleotide variant not specified [RCV004136776] Chr19:17500819 [GRCh38]
Chr19:17611628 [GRCh37]
Chr19:19p13.11		 uncertain significance
NM_198580.3(SLC27A1):c.1597G>A (p.Gly533Ser) single nucleotide variant not specified [RCV004124616] Chr19:17500837 [GRCh38]
Chr19:17611646 [GRCh37]
Chr19:19p13.11		 uncertain significance
NM_198580.3(SLC27A1):c.967T>C (p.Trp323Arg) single nucleotide variant not specified [RCV004134905] Chr19:17489088 [GRCh38]
Chr19:17599897 [GRCh37]
Chr19:19p13.11		 uncertain significance
NM_198580.3(SLC27A1):c.1666G>A (p.Val556Ile) single nucleotide variant not specified [RCV004203321] Chr19:17501302 [GRCh38]
Chr19:17612111 [GRCh37]
Chr19:19p13.11		 likely benign
NM_198580.3(SLC27A1):c.1093G>C (p.Gly365Arg) single nucleotide variant not specified [RCV004102926] Chr19:17497351 [GRCh38]
Chr19:17608160 [GRCh37]
Chr19:19p13.11		 uncertain significance
NM_198580.3(SLC27A1):c.487C>T (p.Arg163Trp) single nucleotide variant not specified [RCV004165332] Chr19:17486882 [GRCh38]
Chr19:17597691 [GRCh37]
Chr19:19p13.11		 uncertain significance
NM_198580.3(SLC27A1):c.1742G>A (p.Arg581Gln) single nucleotide variant not specified [RCV004162322] Chr19:17501378 [GRCh38]
Chr19:17612187 [GRCh37]
Chr19:19p13.11		 uncertain significance
NM_198580.3(SLC27A1):c.385G>A (p.Asp129Asn) single nucleotide variant not specified [RCV004069354] Chr19:17486780 [GRCh38]
Chr19:17597589 [GRCh37]
Chr19:19p13.11		 uncertain significance
NM_198580.3(SLC27A1):c.1000G>A (p.Val334Ile) single nucleotide variant not specified [RCV004146395] Chr19:17497258 [GRCh38]
Chr19:17608067 [GRCh37]
Chr19:19p13.11		 uncertain significance
NM_198580.3(SLC27A1):c.1835G>A (p.Arg612His) single nucleotide variant not specified [RCV004225047] Chr19:17504506 [GRCh38]
Chr19:17615315 [GRCh37]
Chr19:19p13.11		 uncertain significance
NM_198580.3(SLC27A1):c.1532C>T (p.Thr511Ile) single nucleotide variant not specified [RCV004073876] Chr19:17500772 [GRCh38]
Chr19:17611581 [GRCh37]
Chr19:19p13.11		 uncertain significance
NM_198580.3(SLC27A1):c.1547G>A (p.Gly516Glu) single nucleotide variant not specified [RCV004180464] Chr19:17500787 [GRCh38]
Chr19:17611596 [GRCh37]
Chr19:19p13.11		 uncertain significance
NM_198580.3(SLC27A1):c.839A>G (p.Gln280Arg) single nucleotide variant not specified [RCV004325840] Chr19:17488892 [GRCh38]
Chr19:17599701 [GRCh37]
Chr19:19p13.11		 likely benign
GRCh37/hg19 19p13.13-13.11(chr19:13970692-18139376)x3 copy number gain not specified [RCV003986122] Chr19:13970692..18139376 [GRCh37]
Chr19:19p13.13-13.11		 uncertain significance
NM_198580.3(SLC27A1):c.613T>C (p.Ser205Pro) single nucleotide variant not specified [RCV004456750] Chr19:17487224 [GRCh38]
Chr19:17598033 [GRCh37]
Chr19:19p13.11		 uncertain significance
NM_198580.3(SLC27A1):c.781G>A (p.Val261Ile) single nucleotide variant not specified [RCV004456751] Chr19:17487516 [GRCh38]
Chr19:17598325 [GRCh37]
Chr19:19p13.11		 uncertain significance
NM_198580.3(SLC27A1):c.1135G>C (p.Gly379Arg) single nucleotide variant not specified [RCV004456738] Chr19:17497393 [GRCh38]
Chr19:17608202 [GRCh37]
Chr19:19p13.11		 uncertain significance
NM_198580.3(SLC27A1):c.1312C>T (p.Leu438Phe) single nucleotide variant not specified [RCV004456740] Chr19:17500383 [GRCh38]
Chr19:17611192 [GRCh37]
Chr19:19p13.11		 uncertain significance
NM_198580.3(SLC27A1):c.1817G>A (p.Arg606Gln) single nucleotide variant not specified [RCV004456744] Chr19:17504488 [GRCh38]
Chr19:17615297 [GRCh37]
Chr19:19p13.11		 uncertain significance
NM_198580.3(SLC27A1):c.1258C>G (p.Arg420Gly) single nucleotide variant not specified [RCV004456739] Chr19:17500329 [GRCh38]
Chr19:17611138 [GRCh37]
Chr19:19p13.11		 uncertain significance
NM_198580.3(SLC27A1):c.1741C>T (p.Arg581Trp) single nucleotide variant not specified [RCV004456743] Chr19:17501377 [GRCh38]
Chr19:17612186 [GRCh37]
Chr19:19p13.11		 uncertain significance
NM_198580.3(SLC27A1):c.459G>A (p.Met153Ile) single nucleotide variant not specified [RCV004456748] Chr19:17486854 [GRCh38]
Chr19:17597663 [GRCh37]
Chr19:19p13.11		 uncertain significance
NM_198580.3(SLC27A1):c.218G>T (p.Arg73Leu) single nucleotide variant not specified [RCV004456745] Chr19:17486613 [GRCh38]
Chr19:17597422 [GRCh37]
Chr19:19p13.11		 uncertain significance
NM_198580.3(SLC27A1):c.241A>G (p.Ile81Val) single nucleotide variant not specified [RCV004456746] Chr19:17486636 [GRCh38]
Chr19:17597445 [GRCh37]
Chr19:19p13.11		 uncertain significance
NM_198580.3(SLC27A1):c.1055C>T (p.Ala352Val) single nucleotide variant not specified [RCV004456737] Chr19:17497313 [GRCh38]
Chr19:17608122 [GRCh37]
Chr19:19p13.11		 uncertain significance
NM_198580.3(SLC27A1):c.1376C>T (p.Pro459Leu) single nucleotide variant not specified [RCV004456741] Chr19:17500537 [GRCh38]
Chr19:17611346 [GRCh37]
Chr19:19p13.11		 uncertain significance
NM_198580.3(SLC27A1):c.412C>T (p.Arg138Trp) single nucleotide variant not specified [RCV004456747] Chr19:17486807 [GRCh38]
Chr19:17597616 [GRCh37]
Chr19:19p13.11		 uncertain significance
NM_198580.3(SLC27A1):c.1538G>A (p.Arg513His) single nucleotide variant not specified [RCV004456742] Chr19:17500778 [GRCh38]
Chr19:17611587 [GRCh37]
Chr19:19p13.11		 uncertain significance
NM_198580.3(SLC27A1):c.600G>C (p.Leu200Phe) single nucleotide variant not specified [RCV004456749] Chr19:17487211 [GRCh38]
Chr19:17598020 [GRCh37]
Chr19:19p13.11		 uncertain significance
NM_198580.3(SLC27A1):c.1382G>A (p.Arg461His) single nucleotide variant not specified [RCV004672415] Chr19:17500543 [GRCh38]
Chr19:17611352 [GRCh37]
Chr19:19p13.11		 uncertain significance
NM_198580.3(SLC27A1):c.994A>G (p.Thr332Ala) single nucleotide variant not specified [RCV004672416] Chr19:17489115 [GRCh38]
Chr19:17599924 [GRCh37]
Chr19:19p13.11		 uncertain significance
NM_198580.3(SLC27A1):c.1909A>G (p.Thr637Ala) single nucleotide variant not specified [RCV004672417] Chr19:17504580 [GRCh38]
Chr19:17615389 [GRCh37]
Chr19:19p13.11		 uncertain significance
NM_198580.3(SLC27A1):c.380C>G (p.Pro127Arg) single nucleotide variant not specified [RCV004672418] Chr19:17486775 [GRCh38]
Chr19:17597584 [GRCh37]
Chr19:19p13.11		 uncertain significance
NM_198580.3(SLC27A1):c.718A>C (p.Met240Leu) single nucleotide variant not specified [RCV004672419] Chr19:17487329 [GRCh38]
Chr19:17598138 [GRCh37]
Chr19:19p13.11		 uncertain significance
NM_198580.3(SLC27A1):c.728G>A (p.Arg243His) single nucleotide variant not specified [RCV004672413] Chr19:17487463 [GRCh38]
Chr19:17598272 [GRCh37]
Chr19:19p13.11		 uncertain significance
NM_198580.3(SLC27A1):c.1051G>A (p.Glu351Lys) single nucleotide variant not specified [RCV004672412] Chr19:17497309 [GRCh38]
Chr19:17608118 [GRCh37]
Chr19:19p13.11		 uncertain significance
NM_198580.3(SLC27A1):c.1797C>G (p.Ile599Met) single nucleotide variant not specified [RCV004672411] Chr19:17504468 [GRCh38]
Chr19:17615277 [GRCh37]
Chr19:19p13.11		 uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:4640
Count of miRNA genes:1165
Interacting mature miRNAs:1472
Transcripts:ENST00000252595, ENST00000442725, ENST00000593701, ENST00000594962, ENST00000598424, ENST00000598848, ENST00000599380, ENST00000599965, ENST00000600277, ENST00000600297
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300034BP50_HBlood pressure QTL 50 (human)2.10.00094Blood pressuresystolic191108946337089463Human
407209188GWAS858164_Hgut microbiome measurement QTL GWAS858164 (human)0.000001gut microbiome measurement191750175917501760Human
407051681GWAS700657_Hresponse to antidepressant QTL GWAS700657 (human)0.000003response to antidepressant191747947217479473Human

Markers in Region
SLC27A1_7258  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371917,616,088 - 17,617,010UniSTSGRCh37
Build 361917,477,088 - 17,478,010RGDNCBI36
Celera1917,517,704 - 17,518,626RGD
HuRef1917,181,169 - 17,182,091UniSTS
D10S16   No map positions available.
SLC27A1  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371917,611,102 - 17,611,406UniSTSGRCh37
Celera1917,512,717 - 17,513,021UniSTS
HuRef1917,176,373 - 17,176,677UniSTS
D16S325  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map9q34.13UniSTS
Cytogenetic Map9q22.33UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map4q21.1UniSTS
Cytogenetic Map6q25.3UniSTS
Cytogenetic Map2q32.3UniSTS
Cytogenetic Map6q22UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map17q21.2-q21.3UniSTS
Cytogenetic Map13q14.3UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map2q33.3UniSTS
Cytogenetic Map20q13.32UniSTS
Cytogenetic Map1p21.2UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map12q13.2UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map12p13.32UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map8q22.3UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic Map1p13.1UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map4q25UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map7p22.2UniSTS
Cytogenetic Map7q33UniSTS
Cytogenetic Map1p31.3UniSTS
Cytogenetic Map16q24.1UniSTS
Cytogenetic Map6q13UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map10q11.2UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map3q13.32UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map6p22.3UniSTS
Cytogenetic Map12q22UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map3q22.1UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map6q25.2-q25.3UniSTS
Cytogenetic Map1p36.1UniSTS
Cytogenetic Map22q11.2UniSTS
Cytogenetic Map3q26.31UniSTS
Cytogenetic Map7p12.3UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map5p12UniSTS
Cytogenetic Map9q21.13UniSTS
Cytogenetic Map17q21.33UniSTS
Cytogenetic Map20p12.3-p11.21UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map2p13-p12UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map3q25.33UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic Map8q21.13UniSTS
Cytogenetic Map7q32.1UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map17q22UniSTS
Cytogenetic Map3p24.2UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic MapXp22.33UniSTS
Cytogenetic MapYp11.32UniSTS
Cytogenetic Map10q24.31UniSTS
Cytogenetic Map4q34.3UniSTS
Cytogenetic Map10p11.23UniSTS
Cytogenetic Map10p15.1UniSTS
Cytogenetic Map14q21.2UniSTS
Cytogenetic Map6p21.31UniSTS
Cytogenetic Map9p24.1-p23UniSTS
Cytogenetic Map15q15.3UniSTS
Cytogenetic Map12q12UniSTS
Cytogenetic Map5q32UniSTS
Cytogenetic Map10pter-q25.3UniSTS
Cytogenetic Map6q25.2-q27UniSTS
Cytogenetic Map15q26.3UniSTS
Cytogenetic Map15q14UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map1q21.2UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map11p11.2UniSTS
Cytogenetic Map17q21.32UniSTS
Cytogenetic Map11p15.5UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map7p21.1UniSTS
Cytogenetic Map17q23.2UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic Map1p36.3-p34.3UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map4p15.2UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map2q24.3UniSTS
Cytogenetic Map1q25.2UniSTS
Cytogenetic Map6q27UniSTS
Cytogenetic Map12q14.3UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic Map3q27.1UniSTS
Cytogenetic Map15q11.2UniSTS
Cytogenetic Map6p21.33UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map2q12.2UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map3p26UniSTS
Cytogenetic MapXq28UniSTS
Cytogenetic Map3p14.3UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map10q21-q22UniSTS
Cytogenetic Map5q22UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map10q22.2UniSTS
Cytogenetic Map8p22UniSTS
Cytogenetic Map22q11.23UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map12q14.2UniSTS
Cytogenetic Map11q22.3UniSTS
Cytogenetic Map10q26.11UniSTS
Cytogenetic Map10q25.3UniSTS
Cytogenetic Map6q22.32UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map19q13.31UniSTS
Cytogenetic Map17p13.1UniSTS
Cytogenetic Map12q23.3UniSTS
Cytogenetic Map3q21UniSTS
Cytogenetic Map3q21.3UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map13q14.11UniSTS
Cytogenetic Map7q36UniSTS
Cytogenetic Map4q26UniSTS
Cytogenetic Map19qterUniSTS
Cytogenetic Map7p13-p12UniSTS
Cytogenetic Map2p22UniSTS
Cytogenetic Map2q14.3UniSTS
Cytogenetic Map19q13.4UniSTS
D1S1425  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map1p33UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map1p31.3UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map6q25.3UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map2p13.1UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map4q21.23UniSTS
Cytogenetic Map22q12.1UniSTS
Cytogenetic Map8q24.13UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map1q23.1UniSTS
Cytogenetic Map10q22UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map10p14UniSTS
Cytogenetic Map6p21.33UniSTS
Cytogenetic Map10q26.3UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map7p22.2UniSTS
Cytogenetic Map12q13.12UniSTS
Cytogenetic Map18p11.21UniSTS
Cytogenetic Map14q32.12UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map18p11.31UniSTS
Cytogenetic Map13q34UniSTS
Cytogenetic Map4p14UniSTS
Cytogenetic Map8p23.1UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map3q21.3UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map8q12.1UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map10p12UniSTS
Cytogenetic Map12q13UniSTS
Cytogenetic Map11p15.4UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map8q24UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map5q13.2UniSTS
Cytogenetic Map5q32UniSTS
Cytogenetic Map1q21.2UniSTS
Cytogenetic Map3q26.2UniSTS
Cytogenetic Map6q25.2-q25.3UniSTS
Cytogenetic Map20q11.2-q13.2UniSTS
Cytogenetic Map12q13.3UniSTS
Cytogenetic Map1q21-q23UniSTS
Cytogenetic Map17q21.32UniSTS
Cytogenetic Map1p35.3UniSTS
Cytogenetic Map1p12UniSTS
Cytogenetic Map2p23-p22UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map2p16.1UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map16q12.1UniSTS
Cytogenetic Map17q22-q23UniSTS
Cytogenetic Map2p11.1UniSTS
Cytogenetic Map16q12.2UniSTS
Cytogenetic Map2p12-p11.2UniSTS
Cytogenetic Map3q11.1UniSTS
Cytogenetic Map2p21UniSTS
Cytogenetic Map17q11.2-q12UniSTS
Cytogenetic Map2q37.1UniSTS
Cytogenetic Map1p32-p31UniSTS
Cytogenetic Map1p21.3UniSTS
Cytogenetic Map1q32.2UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map7q21-q22UniSTS
Cytogenetic Map1q25.3UniSTS
Cytogenetic Map18p11.3-p11.2UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map21p11.1UniSTS
Cytogenetic Map12q24.31-q24.32UniSTS
Cytogenetic Map9q33.2UniSTS
Cytogenetic Map11q13.5UniSTS
Cytogenetic Map12p12.2-p11.2UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map2q14.3UniSTS
Cytogenetic Map19p13.3-p13.2UniSTS
Cytogenetic Map7q32.1UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map17q22-q23.2UniSTS
Cytogenetic Map3q27.1UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map4q21.21UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic Map14q24.2UniSTS
Cytogenetic Map20q13.33UniSTS
Cytogenetic Map3p21UniSTS
Cytogenetic Map10p11.23UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map1q25.2UniSTS
Cytogenetic Map18q12.1UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map15q23UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map13q12.11UniSTS
Cytogenetic Map1p36.31UniSTS
Cytogenetic Map3q21.1UniSTS
Cytogenetic Map12p12UniSTS
Cytogenetic Map21q22.11UniSTS
Cytogenetic Map15q15.3UniSTS
Cytogenetic MapXq12-q13UniSTS
Cytogenetic Map22q11.2UniSTS
Cytogenetic Map7q31.1-q31.3UniSTS
Cytogenetic MapXp22.11UniSTS
Cytogenetic Map3p21.1-p14.2UniSTS
Cytogenetic Map2p24UniSTS
Cytogenetic Map20p12.1UniSTS
Cytogenetic Map3q26.33UniSTS
Cytogenetic Map12q13.11-q14.3UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map9q21.33UniSTS
Cytogenetic Map12q12UniSTS
Cytogenetic MapXq13-q21UniSTS
Cytogenetic Map8q24.22UniSTS
Cytogenetic Map11p13UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map6q25.2-q27UniSTS
Cytogenetic Map12q24.32UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic MapXq13.1UniSTS
Cytogenetic Map22q12.2UniSTS
Cytogenetic Map14q12UniSTS
Cytogenetic Map12q23-q24.1UniSTS
Cytogenetic Map4q35.1UniSTS
Cytogenetic Map17q24.1UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map14q21UniSTS
Cytogenetic Map9p24.3UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map2p14UniSTS
Cytogenetic Map21q22.2UniSTS
Cytogenetic Map2q12.3UniSTS
Cytogenetic Map8p21.1UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map3q25.33UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic Map1p34UniSTS
Cytogenetic Map19p13.1UniSTS
Cytogenetic Map5q14.1UniSTS
Cytogenetic MapXq22.3UniSTS
Cytogenetic Map7p21.1UniSTS
Cytogenetic Map6p25.2UniSTS
Cytogenetic Map10q23.33UniSTS
Cytogenetic Map15q11-q12UniSTS
Cytogenetic Map3p22.2UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map15q21.1-q21.2UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map4q13.3UniSTS
Cytogenetic Map19p13.13UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map17q24.3UniSTS
Cytogenetic Map12p13.33UniSTS
Cytogenetic Map11q14.1UniSTS
Cytogenetic Map3p22-p21.3UniSTS
Cytogenetic Map16q22.3UniSTS
Cytogenetic Map1p22.1UniSTS
Cytogenetic Map6p12.1UniSTS
Cytogenetic Map19q13.33-q13.41UniSTS
Cytogenetic Map2p25.3UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map5p12UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map7q35UniSTS
Cytogenetic Map17p12UniSTS
Cytogenetic Map7q11.1UniSTS
Cytogenetic Map2p25.1-p24.1UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map4q31.21UniSTS
Cytogenetic Map5p13.1UniSTS
Cytogenetic MapXq22.1UniSTS
Cytogenetic Map9q21.11UniSTS
Cytogenetic Map5q13UniSTS
Cytogenetic Map1p22.2UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map12q24UniSTS
Cytogenetic MapXq24UniSTS
Cytogenetic Map1q24.2UniSTS
Cytogenetic Map22q13.31UniSTS
Cytogenetic Map8p11.23UniSTS
Cytogenetic Map1q23.3UniSTS
Cytogenetic Map16p12UniSTS
Cytogenetic Map10p15-p14UniSTS
Cytogenetic Map19q13UniSTS
Cytogenetic Map1q22-q23UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map7q31UniSTS
Cytogenetic Map10q26UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map6p22.3UniSTS
Cytogenetic Map6p21.2UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map11q24.2UniSTS
Cytogenetic MapXq28UniSTS
Cytogenetic Map1p33-p32UniSTS
Cytogenetic Map5q35.2UniSTS
Cytogenetic Map3p14.3UniSTS
Cytogenetic Map12q24.33UniSTS
Cytogenetic Map3q26.1-q26.2UniSTS
Cytogenetic Map12p13UniSTS
Cytogenetic Map7q36.1UniSTS
Cytogenetic Map8p11.21UniSTS
Cytogenetic Map12q13.1-q13.2UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map19q13.33UniSTS
Cytogenetic Map16p12.3UniSTS
Cytogenetic Map13q14.11UniSTS
Cytogenetic Map9p13.2UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map3q13.2UniSTS
Cytogenetic Map8p22UniSTS
Cytogenetic Map22q11.23UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map1q42.3UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map5q12.3UniSTS
Cytogenetic Map20q11.21UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map12q14.3UniSTS
Cytogenetic Map6q15UniSTS
Cytogenetic Map6q22.32UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map19q13.31UniSTS
Cytogenetic Map16p13.11UniSTS
Cytogenetic Map10q24.32UniSTS
Cytogenetic Map4p16.1UniSTS
Cytogenetic Map18q11.1UniSTS
Cytogenetic Map16q23.2UniSTS
Cytogenetic Map3q12.1UniSTS
Cytogenetic Map15q24-q25UniSTS
Cytogenetic Map7q31.1UniSTS
Cytogenetic Map15q26.1UniSTS
Cytogenetic Map8q13.1UniSTS
Cytogenetic Map6pter-p12.1UniSTS
Cytogenetic Map6q16UniSTS
Cytogenetic Map12q14.1UniSTS
Cytogenetic Map17q21.2UniSTS
Cytogenetic Map9q22.2UniSTS
Cytogenetic Map17q23.2UniSTS
Cytogenetic Map11q23.1-q23.2UniSTS
Cytogenetic Map13q14UniSTS
Cytogenetic Map4q23UniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map11q24.3UniSTS
Cytogenetic Map7p14UniSTS
Cytogenetic Map15q24.1UniSTS
Cytogenetic Map16q24.2UniSTS
Cytogenetic Map12q13.11UniSTS
Cytogenetic Map9p13.3UniSTS
Cytogenetic Map8q22.1UniSTS
Cytogenetic Map6q16.2UniSTS
Cytogenetic Map5p15.2UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic Map14q22.3UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map12q13.2UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map3q29UniSTS
Cytogenetic Map5q23.3-q31.1UniSTS
Cytogenetic Map1p36UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map12p13.31UniSTS
Cytogenetic Map3q12.3UniSTS
Cytogenetic Map11q23UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map20q11UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map5q23.3UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map1q42UniSTS
Cytogenetic MapXp11.23UniSTS
Cytogenetic Map12q24.13UniSTS
Cytogenetic Map3q27.3UniSTS
Cytogenetic Map14q21.3UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map2p15UniSTS
Cytogenetic Map17q22UniSTS
Cytogenetic Map20q13.32UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic MapXq21.1UniSTS
D10S16  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map3p24.2UniSTS
Cytogenetic Map21q21.3UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map16q24.1UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic Map11q24.2UniSTS
Cytogenetic Map5q23.3-q31.1UniSTS
Cytogenetic Map7q32UniSTS
Cytogenetic Map1q21-q23UniSTS
Cytogenetic MapXp11.23UniSTS
Cytogenetic Map2q11.2-q12UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map1p36.21UniSTS
Cytogenetic Map3p22UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map2p12UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map9p13.3-p12UniSTS
Cytogenetic Map3p21.1UniSTS
Cytogenetic Map5p13.1UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map2p25.2UniSTS
Cytogenetic Map5q21-q22UniSTS
Cytogenetic Map2p22.1UniSTS
Cytogenetic Map1q32.3UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map18q12UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map3q27.3UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map2p15UniSTS
Cytogenetic Map20q13.32UniSTS
Cytogenetic Map10q26UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map7q21.13UniSTS
Cytogenetic Map1p33UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map9q22.3UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map12q13.2UniSTS
Cytogenetic Map22q13.31-q13.33UniSTS
Cytogenetic Map1q24.1UniSTS
Cytogenetic Map7q32.2UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map1q42.11UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map19p13.1UniSTS
Cytogenetic Map11q13.5UniSTS
Cytogenetic Map11q24UniSTS
Cytogenetic Map2q11.2-q12.1UniSTS
Cytogenetic Map3q21.2UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map19p13UniSTS
Cytogenetic Map8p11.21UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map20q12UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic Map17q22.2UniSTS
Cytogenetic Map18q21UniSTS
Cytogenetic Map11q14.2UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map4q34UniSTS
Cytogenetic Map2p22-p21UniSTS
Cytogenetic Map10q26.3UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map2q37.1UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map1p36.23UniSTS
Cytogenetic Map7p22.2UniSTS
Cytogenetic Map12q24.13UniSTS
Cytogenetic Map8p21.2UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map14q32.12UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map1p36.31UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic MapXq26.3UniSTS
Cytogenetic Map8p23.1UniSTS
Cytogenetic Map6q13UniSTS
Cytogenetic Map3p21.31UniSTS
Cytogenetic Map9p13.2UniSTS
Cytogenetic Map17q25UniSTS
Cytogenetic Map9q22.2UniSTS
Cytogenetic Map14q32.33UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map13q12.11UniSTS
Cytogenetic Map16p13.13UniSTS
Cytogenetic Map11p15.4UniSTS
Cytogenetic Map7q22UniSTS
Cytogenetic Map3q21UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map22q13UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map11p15.3-p15.1UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map10q22.2UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map7p22.3UniSTS
Cytogenetic Map3p21UniSTS
Cytogenetic MapXp22.3UniSTS
Cytogenetic Map1q42.3UniSTS
Cytogenetic Map18q11.2UniSTS
Cytogenetic Map6p24.3UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map1q25UniSTS
Cytogenetic Map15q11.2UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map3q26UniSTS
Cytogenetic Map12p12.1-p11.2UniSTS
Cytogenetic Map11q23.1UniSTS
Cytogenetic Map13q14.11UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map7p15.2UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map10q11.22UniSTS
Cytogenetic Map5p12UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map9q21.13UniSTS
Cytogenetic Map5q13.2UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic MapXq23UniSTS
Cytogenetic Map2p21UniSTS
Cytogenetic Map22q11.1UniSTS
Cytogenetic Map16q13UniSTS
Cytogenetic Map16pUniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic MapXp11.3UniSTS
Cytogenetic Map1q25.1UniSTS
Cytogenetic Map10q23-q24UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map7q31UniSTS
Cytogenetic Map6q23.3UniSTS
Cytogenetic MapXp22.2UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map20q11.22UniSTS
Cytogenetic Map4q35.1UniSTS
Cytogenetic Map3q21.3UniSTS
Cytogenetic Map5q12.3UniSTS
Cytogenetic Map6q25.1UniSTS
Cytogenetic Map14q24.1UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map14q23.2UniSTS
Cytogenetic Map15q24.1UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map8q23.1UniSTS
Cytogenetic Map2q14.3UniSTS
Cytogenetic Map20q13.33UniSTS
Cytogenetic Map21q22.11UniSTS
Cytogenetic Map5p15.1UniSTS
Cytogenetic Map15q13.1UniSTS
Cytogenetic Map15q26.1UniSTS
Cytogenetic Map7q32.1UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map1p31.1UniSTS
Cytogenetic Map17qterUniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map12q22UniSTS
Cytogenetic Map16q22.2UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic MapXp22.33UniSTS
Cytogenetic MapYp11.32UniSTS
Cytogenetic Map14q24.2UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map13q34UniSTS
Cytogenetic Map10p11.23UniSTS
Cytogenetic Map15q15.2UniSTS
Cytogenetic Map8p21.1UniSTS
Cytogenetic Map22q12.2UniSTS
Cytogenetic Map15q22.2UniSTS
Cytogenetic Map15q21UniSTS
Cytogenetic Map6p21.31UniSTS
Cytogenetic Map10q23.1UniSTS
Cytogenetic Map1p36.2UniSTS
Cytogenetic Map2p16.1UniSTS
Cytogenetic Map22q11.2UniSTS
Cytogenetic Map17q23.3UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map20q12-q13.12UniSTS
Cytogenetic Map3q26.33UniSTS
Cytogenetic Map5q31.2-q34UniSTS
Cytogenetic Map5q31.2UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic MapXq13-q21UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map1pter-q31.3UniSTS
Cytogenetic Map15q21.1UniSTS
Cytogenetic Map3q13.33UniSTS
Cytogenetic MapXq13.1UniSTS
Cytogenetic Map3p23-p21UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map1p34.1UniSTS
Cytogenetic Map2q21.1UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map17q21.33UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map10q11.21UniSTS
Cytogenetic Map16q22UniSTS
Cytogenetic Map2q24UniSTS
Cytogenetic Map1q23.3UniSTS
Cytogenetic Map3q13.13UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map16p13.1UniSTS
Cytogenetic Map19q13.11UniSTS
Cytogenetic MapXp22.12UniSTS
Cytogenetic Map9q21.33UniSTS
Cytogenetic Map5q32UniSTS
Cytogenetic Map16q11.2UniSTS
Cytogenetic Map10p12.31UniSTS
Cytogenetic Map3q25.33UniSTS
Cytogenetic Map8q21.2UniSTS
Cytogenetic Map10q26.13UniSTS
Cytogenetic Map10q25.3UniSTS
Cytogenetic Map15q14-q15UniSTS
Cytogenetic Map8p11.2UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map4p15.2UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map7p21.1UniSTS
Cytogenetic Map1p36.32UniSTS
Cytogenetic Map1p36.1-p34UniSTS
Cytogenetic Map4p13UniSTS
Cytogenetic Map7q31.1-q31.2UniSTS
Cytogenetic Map8q22.2UniSTS
Cytogenetic Map15q21.1-q21.2UniSTS
Cytogenetic Map16q21UniSTS
Cytogenetic MapXq12UniSTS
Cytogenetic Map7q36.1UniSTS
Cytogenetic Map7p14.1UniSTS
Cytogenetic Map6p23UniSTS
Cytogenetic Map3p11.1UniSTS
Cytogenetic Map15q21.3UniSTS
Cytogenetic Map13q12UniSTS
Cytogenetic Map12q23.2UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map16q22.3UniSTS
Cytogenetic MapXq21UniSTS
Cytogenetic Map15q15UniSTS
Cytogenetic Map4q25UniSTS
Cytogenetic Map3q22.1UniSTS
Cytogenetic Map1q25.2UniSTS
Cytogenetic Map11q14.3UniSTS
Cytogenetic Map10q21.3UniSTS
Cytogenetic Map14q11.2UniSTS
Cytogenetic Map15q24.2UniSTS
Cytogenetic Map2p14UniSTS
Cytogenetic Map7q11.1UniSTS
Cytogenetic Map6p21UniSTS
Cytogenetic Map2p25.1-p24.1UniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map4q13.3UniSTS
Cytogenetic Map12p11.21UniSTS
Cytogenetic Map18q21.3UniSTS
Cytogenetic Map17p13UniSTS
Cytogenetic Map8q12UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map21q22.13UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map17q24.3UniSTS
Cytogenetic Map1p21UniSTS
Cytogenetic MapXq24UniSTS
Cytogenetic Map2q34UniSTS
Cytogenetic Map8p11.23UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map9q33.3UniSTS
Cytogenetic Map16p12UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map12q15UniSTS
Cytogenetic Map2q12.2UniSTS
Cytogenetic Map8p12UniSTS
Cytogenetic Map7q22.3UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map4q35UniSTS
Cytogenetic Map19q13.1-q13.2UniSTS
Cytogenetic Map16p13.12UniSTS
Cytogenetic Map9q34.1UniSTS
Cytogenetic Map7q36.2UniSTS
Cytogenetic Map3p23UniSTS
Cytogenetic Map6p25UniSTS
Cytogenetic Map9q22.1-q22.2UniSTS
Cytogenetic Map3q26.1-q26.2UniSTS
Cytogenetic Map5q31-q34UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map12p13UniSTS
Cytogenetic Map4q26UniSTS
Cytogenetic Map4p15.3UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map1p32-p31UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map3q13.2UniSTS
Cytogenetic Map2q33.3UniSTS
Cytogenetic Map8p22UniSTS
Cytogenetic Map22q11.23UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map18q21.32UniSTS
Cytogenetic Map15q26.3UniSTS
Cytogenetic Map12q14.2UniSTS
Cytogenetic Map2q31.1-q31.2UniSTS
Cytogenetic Map12q13.11UniSTS
Cytogenetic Map9p13.3UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map6p12.3UniSTS
Cytogenetic Map6q22.32UniSTS
Cytogenetic Map5q15UniSTS
Cytogenetic Map3p14.2UniSTS
Cytogenetic Map3p25.1UniSTS
Cytogenetic Map3q27.1UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map2q37UniSTS
Cytogenetic Map19q13.31UniSTS
Cytogenetic Map4q23UniSTS
Cytogenetic Map16q24.3UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map10q22.1UniSTS
Cytogenetic Map18q11.1UniSTS
Cytogenetic Map16q23.2UniSTS
Cytogenetic Map12q13UniSTS
Cytogenetic Map18q21.1UniSTS
Cytogenetic Map12q12-q13UniSTS
Cytogenetic Map9p22.3UniSTS
Cytogenetic Map6p21.2UniSTS
Cytogenetic Map6p22.1UniSTS
Cytogenetic Map11p15.1UniSTS
Cytogenetic Map19qterUniSTS
Cytogenetic Map20q13.3-qterUniSTS
Cytogenetic Map12q14.1UniSTS
Cytogenetic Map7p11UniSTS
Cytogenetic Map7p15UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map16p12.3UniSTS
Cytogenetic Map3q29UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map13q14UniSTS
Cytogenetic Map17pUniSTS
Cytogenetic Map11p14.1UniSTS
Cytogenetic Map2p13.2UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map10q11.23UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic Map13q22.1UniSTS
Cytogenetic Map17p13.1UniSTS
Cytogenetic Map14q23.3UniSTS
Cytogenetic Map3q26.2UniSTS


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
pharyngeal arch
renal system
reproductive system
respiratory system
sensory system
visual system
1204 2439 2788 2253 4974 1726 2351 6 624 1951 465 2270 7306 6472 53 3734 1 852 1744 1617 175 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_198580 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011528000 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011528001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011528002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011528003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017026781 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047438789 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047438790 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047438791 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047438792 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054320935 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054320936 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054320937 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054320938 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054320939 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054320940 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054320941 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001753680 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001753681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC010319 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC010618 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK131101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK294238 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK296355 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK299852 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK315935 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AX101332 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC013149 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC059399 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471106 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN333611 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENST00000252595   ⟹   ENSP00000252595
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1917,470,524 - 17,506,168 (+)Ensembl
Ensembl Acc Id: ENST00000593701
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1917,488,760 - 17,500,555 (+)Ensembl
Ensembl Acc Id: ENST00000594962
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1917,495,415 - 17,506,168 (+)Ensembl
Ensembl Acc Id: ENST00000598424   ⟹   ENSP00000472313
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1917,470,489 - 17,504,986 (+)Ensembl
Ensembl Acc Id: ENST00000598848
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1917,499,870 - 17,504,601 (+)Ensembl
Ensembl Acc Id: ENST00000599380   ⟹   ENSP00000469459
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1917,470,528 - 17,499,398 (+)Ensembl
Ensembl Acc Id: ENST00000599965   ⟹   ENSP00000470457
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1917,500,366 - 17,504,900 (+)Ensembl
Ensembl Acc Id: ENST00000600277   ⟹   ENSP00000472082
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1917,468,769 - 17,497,314 (+)Ensembl
Ensembl Acc Id: ENST00000600297   ⟹   ENSP00000469881
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1917,470,538 - 17,489,065 (+)Ensembl
RefSeq Acc Id: NM_198580   ⟹   NP_940982
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381917,470,524 - 17,506,168 (+)NCBI
GRCh371917,581,300 - 17,616,977 (+)ENTREZGENE
Build 361917,442,300 - 17,477,977 (+)NCBI Archive
HuRef1917,146,725 - 17,182,058 (+)ENTREZGENE
CHM1_11917,580,621 - 17,616,359 (+)NCBI
T2T-CHM13v2.01917,605,160 - 17,640,805 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011528000   ⟹   XP_011526302
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381917,468,767 - 17,506,168 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011528002   ⟹   XP_011526304
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381917,469,597 - 17,506,168 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011528003   ⟹   XP_011526305
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381917,468,767 - 17,506,168 (+)NCBI
Sequence:
RefSeq Acc Id: XM_047438789   ⟹   XP_047294745
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381917,469,597 - 17,506,168 (+)NCBI
RefSeq Acc Id: XM_047438790   ⟹   XP_047294746
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381917,469,981 - 17,506,168 (+)NCBI
RefSeq Acc Id: XM_047438791   ⟹   XP_047294747
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381917,470,524 - 17,500,404 (+)NCBI
RefSeq Acc Id: XM_047438792   ⟹   XP_047294748
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381917,470,524 - 17,500,404 (+)NCBI
RefSeq Acc Id: XM_054320935   ⟹   XP_054176910
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01917,603,352 - 17,640,805 (+)NCBI
RefSeq Acc Id: XM_054320936   ⟹   XP_054176911
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01917,604,245 - 17,640,805 (+)NCBI
RefSeq Acc Id: XM_054320937   ⟹   XP_054176912
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01917,604,187 - 17,640,805 (+)NCBI
RefSeq Acc Id: XM_054320938   ⟹   XP_054176913
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01917,604,617 - 17,640,805 (+)NCBI
RefSeq Acc Id: XM_054320939   ⟹   XP_054176914
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01917,602,871 - 17,640,805 (+)NCBI
RefSeq Acc Id: XM_054320940   ⟹   XP_054176915
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01917,605,160 - 17,635,047 (+)NCBI
RefSeq Acc Id: XM_054320941   ⟹   XP_054176916
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01917,605,160 - 17,635,047 (+)NCBI
Protein Sequences
Protein RefSeqs NP_940982 (Get FASTA)   NCBI Sequence Viewer  
  XP_011526302 (Get FASTA)   NCBI Sequence Viewer  
  XP_011526304 (Get FASTA)   NCBI Sequence Viewer  
  XP_011526305 (Get FASTA)   NCBI Sequence Viewer  
  XP_047294745 (Get FASTA)   NCBI Sequence Viewer  
  XP_047294746 (Get FASTA)   NCBI Sequence Viewer  
  XP_047294747 (Get FASTA)   NCBI Sequence Viewer  
  XP_047294748 (Get FASTA)   NCBI Sequence Viewer  
  XP_054176910 (Get FASTA)   NCBI Sequence Viewer  
  XP_054176911 (Get FASTA)   NCBI Sequence Viewer  
  XP_054176912 (Get FASTA)   NCBI Sequence Viewer  
  XP_054176913 (Get FASTA)   NCBI Sequence Viewer  
  XP_054176914 (Get FASTA)   NCBI Sequence Viewer  
  XP_054176915 (Get FASTA)   NCBI Sequence Viewer  
  XP_054176916 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH13149 (Get FASTA)   NCBI Sequence Viewer  
  AAH59399 (Get FASTA)   NCBI Sequence Viewer  
  BAC85151 (Get FASTA)   NCBI Sequence Viewer  
  BAH11711 (Get FASTA)   NCBI Sequence Viewer  
  BAH12327 (Get FASTA)   NCBI Sequence Viewer  
  BAH13148 (Get FASTA)   NCBI Sequence Viewer  
  BAH14306 (Get FASTA)   NCBI Sequence Viewer  
  CAC36512 (Get FASTA)   NCBI Sequence Viewer  
  EAW84609 (Get FASTA)   NCBI Sequence Viewer  
  EAW84610 (Get FASTA)   NCBI Sequence Viewer  
  EAW84611 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000252595
  ENSP00000252595.6
  ENSP00000469459.1
  ENSP00000469881.1
  ENSP00000470457.1
  ENSP00000472082.1
  ENSP00000472313.1
GenBank Protein Q6PCB7 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_940982   ⟸   NM_198580
- UniProtKB: Q6PCB7 (UniProtKB/Swiss-Prot),   B7Z662 (UniProtKB/Swiss-Prot),   A6NIH2 (UniProtKB/Swiss-Prot),   B7Z3U1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011526302   ⟸   XM_011528000
- Peptide Label: isoform X1
- UniProtKB: B7Z3U1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011526305   ⟸   XM_011528003
- Peptide Label: isoform X2
- UniProtKB: Q6PCB7 (UniProtKB/Swiss-Prot),   B7Z662 (UniProtKB/Swiss-Prot),   A6NIH2 (UniProtKB/Swiss-Prot),   B7Z3U1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011526304   ⟸   XM_011528002
- Peptide Label: isoform X1
- UniProtKB: B7Z3U1 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSP00000252595   ⟸   ENST00000252595
Ensembl Acc Id: ENSP00000472313   ⟸   ENST00000598424
Ensembl Acc Id: ENSP00000469459   ⟸   ENST00000599380
Ensembl Acc Id: ENSP00000470457   ⟸   ENST00000599965
Ensembl Acc Id: ENSP00000472082   ⟸   ENST00000600277
Ensembl Acc Id: ENSP00000469881   ⟸   ENST00000600297
RefSeq Acc Id: XP_047294745   ⟸   XM_047438789
- Peptide Label: isoform X2
- UniProtKB: Q6PCB7 (UniProtKB/Swiss-Prot),   B7Z662 (UniProtKB/Swiss-Prot),   A6NIH2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047294746   ⟸   XM_047438790
- Peptide Label: isoform X2
- UniProtKB: Q6PCB7 (UniProtKB/Swiss-Prot),   B7Z662 (UniProtKB/Swiss-Prot),   A6NIH2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047294747   ⟸   XM_047438791
- Peptide Label: isoform X3
RefSeq Acc Id: XP_047294748   ⟸   XM_047438792
- Peptide Label: isoform X4
RefSeq Acc Id: XP_054176914   ⟸   XM_054320939
- Peptide Label: isoform X2
- UniProtKB: Q6PCB7 (UniProtKB/Swiss-Prot),   B7Z662 (UniProtKB/Swiss-Prot),   A6NIH2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054176910   ⟸   XM_054320935
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054176912   ⟸   XM_054320937
- Peptide Label: isoform X2
- UniProtKB: Q6PCB7 (UniProtKB/Swiss-Prot),   B7Z662 (UniProtKB/Swiss-Prot),   A6NIH2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054176911   ⟸   XM_054320936
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054176913   ⟸   XM_054320938
- Peptide Label: isoform X2
- UniProtKB: Q6PCB7 (UniProtKB/Swiss-Prot),   B7Z662 (UniProtKB/Swiss-Prot),   A6NIH2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054176915   ⟸   XM_054320940
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054176916   ⟸   XM_054320941
- Peptide Label: isoform X4
Protein Domains
AMP-binding enzyme C-terminal   AMP-dependent synthetase/ligase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q6PCB7-F1-model_v2 AlphaFold Q6PCB7 1-646 view protein structure

Promoters
RGD ID:6795442
Promoter ID:HG_KWN:29250
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell_12Hour,   HeLa_S3,   K562,   Lymphoblastoid
Transcripts:ENST00000300969,   NM_198580,   UC002NGT.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361917,441,431 - 17,442,477 (+)MPROMDB
RGD ID:6811744
Promoter ID:HG_ACW:40429
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:HeLa_S3
Transcripts:SLC27A1.EAPR07
Position:
Human AssemblyChrPosition (strand)Source
Build 361917,460,541 - 17,461,041 (+)MPROMDB
RGD ID:6796046
Promoter ID:HG_KWN:29251
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour
Transcripts:UC002NGV.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361917,467,941 - 17,468,441 (+)MPROMDB
RGD ID:7239047
Promoter ID:EPDNEW_H25268
Type:initiation region
Name:SLC27A1_2
Description:solute carrier family 27 member 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H25269  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381917,468,792 - 17,468,852EPDNEW
RGD ID:7239045
Promoter ID:EPDNEW_H25269
Type:initiation region
Name:SLC27A1_1
Description:solute carrier family 27 member 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H25268  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381917,470,530 - 17,470,590EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:10995 AgrOrtholog
COSMIC SLC27A1 COSMIC
Ensembl Genes ENSG00000130304 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000252595 ENTREZGENE
  ENST00000252595.12 UniProtKB/Swiss-Prot
  ENST00000598424.5 UniProtKB/Swiss-Prot
  ENST00000599380.5 UniProtKB/TrEMBL
  ENST00000599965.1 UniProtKB/TrEMBL
  ENST00000600277.5 UniProtKB/TrEMBL
  ENST00000600297.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.300.30 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.40.50.12780 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000130304 GTEx
HGNC ID HGNC:10995 ENTREZGENE
Human Proteome Map SLC27A1 Human Proteome Map
InterPro AMP-bd_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  AMP-bd_C_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  AMP-binding_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  AMP-dep_Synth/Lig UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  AMP-dep_Synthh-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:376497 UniProtKB/Swiss-Prot
NCBI Gene SLC27A1 ENTREZGENE
OMIM 600691 OMIM
PANTHER LONG-CHAIN FATTY ACID TRANSPORT PROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR43107:SF7 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam AMP-binding UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  AMP-binding_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA35869 PharmGKB
PROSITE AMP_BINDING UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP Acetyl-CoA synthetase-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A6NIH2 ENTREZGENE
  B7Z225_HUMAN UniProtKB/TrEMBL
  B7Z3U1 ENTREZGENE, UniProtKB/TrEMBL
  B7Z662 ENTREZGENE
  M0QXY2_HUMAN UniProtKB/TrEMBL
  M0QZC9_HUMAN UniProtKB/TrEMBL
  Q6PCB7 ENTREZGENE
  Q96DY3_HUMAN UniProtKB/TrEMBL
  S27A1_HUMAN UniProtKB/Swiss-Prot
UniProt Secondary A6NIH2 UniProtKB/Swiss-Prot
  B7Z662 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-02-23 SLC27A1  solute carrier family 27 member 1    solute carrier family 27 (fatty acid transporter), member 1  Symbol and/or name change 5135510 APPROVED