SLC27A1 (solute carrier family 27 member 1) - Rat Genome Database

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Gene: SLC27A1 (solute carrier family 27 member 1) Homo sapiens
Analyze
Symbol: SLC27A1
Name: solute carrier family 27 member 1
RGD ID: 1604940
HGNC Page HGNC:10995
Description: Enables biotin transmembrane transporter activity; efflux transmembrane transporter activity; and long-chain fatty acid transmembrane transporter activity. Involved in export across plasma membrane; lipid transport across blood-brain barrier; and monocarboxylic acid transport. Located in plasma membrane.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: ACSVL5; arachidonate--CoA ligase; FATP; FATP-1; FATP1; fatty acid transport protein 1; FLJ00336; long-chain fatty acid transport protein 1; long-chain-fatty-acid--CoA ligase; MGC71751; solute carrier family 27 (fatty acid transporter), member 1; very long-chain acyl-CoA synthetase
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381917,468,767 - 17,506,168 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1917,468,769 - 17,506,168 (+)EnsemblGRCh38hg38GRCh38
GRCh371917,581,333 - 17,616,977 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361917,442,300 - 17,477,977 (+)NCBINCBI36Build 36hg18NCBI36
Celera1917,482,907 - 17,518,593 (+)NCBICelera
Cytogenetic Map19p13.11NCBI
HuRef1917,146,725 - 17,182,058 (+)NCBIHuRef
CHM1_11917,580,668 - 17,616,359 (+)NCBICHM1_1
T2T-CHM13v2.01917,602,871 - 17,640,805 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
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Reference
Notes
Source
Original Reference(s)
SLC27A1Humanfamilial hyperlipidemia  ISOSlc27a1 (Rattus norvegicus)1642794 RGD 
SLC27A1Humanglucose intolerance  ISOSlc27a1 (Rattus norvegicus)1642794 RGD 
SLC27A1Humanhyperinsulinism  ISOSlc27a1 (Rattus norvegicus)1642794 RGD 
SLC27A1HumanInsulin Resistance  ISOSlc27a1 (Rattus norvegicus)9068941protein::heart:basal level increased but unresponsive to insulin on a high cholesterol and high fructose dietRGDPMID:17400720 and REF_RGD_ID:1642795
SLC27A1HumanMetabolic Syndrome susceptibilityISOSlc27a1 (Mus musculus)1642790 RGD 
SLC27A1Humanmyocardial infarction  ISOSlc27a1 (Rattus norvegicus)1642800protein:decreased expression:heartRGD 
SLC27A1Humanobesity susceptibilityISOSlc27a1 (Mus musculus)1642790 RGD 
SLC27A1Humanobesity  ISOSlc27a1 (Rattus norvegicus)9068941protein:increased expression:soleus muscle and protein:decreased expression:gastrocnemius muscleRGDPMID:15281014 and REF_RGD_ID:1642794

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Original Reference(s)
SLC27A1Human(1->4)-beta-D-glucan multiple interactionsISOSlc27a1 (Mus musculus)6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of SLC27A1 mRNACTDPMID:36331819
SLC27A1Human1,1-dichloroethene increases expressionISOSlc27a1 (Rattus norvegicus)6480464vinylidene chloride results in increased expression of SLC27A1 proteinCTDPMID:14565772
SLC27A1Human1,2-dimethylhydrazine decreases expressionISOSlc27a1 (Mus musculus)64804641 and 2-Dimethylhydrazine results in decreased expression of SLC27A1 mRNACTDPMID:22206623
SLC27A1Human17alpha-ethynylestradiol decreases expressionISOSlc27a1 (Mus musculus)6480464Ethinyl Estradiol results in decreased expression of SLC27A1 mRNACTDPMID:17555576
SLC27A1Human2,2',4,4',5,5'-hexachlorobiphenyl multiple interactionsISOSlc27a1 (Mus musculus)6480464[Tetrachlorodibenzodioxin co-treated with 2 more ...CTDPMID:28433925
SLC27A1Human2,3,7,8-tetrachlorodibenzodioxine affects expressionEXP 6480464Tetrachlorodibenzodioxin affects the expression of SLC27A1 mRNACTDPMID:22574217
SLC27A1Human2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOSlc27a1 (Rattus norvegicus)6480464Tetrachlorodibenzodioxin results in decreased expression of SLC27A1 mRNACTDPMID:33387578
SLC27A1Human2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISOSlc27a1 (Mus musculus)6480464[Tetrachlorodibenzodioxin co-treated with 2 more ...CTDPMID:28433925
SLC27A1Human2,3,7,8-tetrachlorodibenzodioxine increases expressionISOSlc27a1 (Mus musculus)6480464Tetrachlorodibenzodioxin results in increased expression of SLC27A1 mRNACTDPMID:22977169
SLC27A1Human2,3,7,8-tetrachlorodibenzodioxine affects expressionISOSlc27a1 (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of SLC27A1 mRNACTDPMID:21570461 and PMID:22539624
SLC27A1Human2-Ethylhexanoic acid increases expressionISOSlc27a1 (Rattus norvegicus)64804642-ethylhexanoic acid results in increased expression of SLC27A1 mRNA and 2-ethylhexanoic acid results in increased expression of SLC27A1 proteinCTDPMID:15647598
SLC27A1Human3,3',4,4',5-pentachlorobiphenyl affects expressionISOSlc27a1 (Mus musculus)64804643 more ...CTDPMID:37080397
SLC27A1Human3,4-methylenedioxymethamphetamine increases expressionISOSlc27a1 (Mus musculus)6480464N-Methyl-3 and 4-methylenedioxyamphetamine results in increased expression of SLC27A1 mRNACTDPMID:20188158
SLC27A1Human3-iodothyronamine affects uptakeEXP 6480464SLC27A1 mRNA affects the uptake of 3-iodothyronamineCTDPMID:19074582
SLC27A1Human3-isobutyl-1-methyl-7H-xanthine multiple interactionsISOSlc27a1 (Mus musculus)6480464[[Dexamethasone co-treated with INS protein co-treated with 1-Methyl-3-isobutylxanthine] co-treated with alitretinoin] results in increased expression of SLC27A1 mRNA more ...CTDPMID:10777552
SLC27A1Human3-methylcholanthrene increases expressionISOSlc27a1 (Mus musculus)6480464Methylcholanthrene results in increased expression of SLC27A1 mRNACTDPMID:20713471
SLC27A1Human4,4'-diaminodiphenylmethane increases expressionISOSlc27a1 (Mus musculus)64804644 and 4'-diaminodiphenylmethane results in increased expression of SLC27A1 mRNACTDPMID:18648102
SLC27A1Human4,4'-sulfonyldiphenol increases expressionEXP 6480464bisphenol S results in increased expression of SLC27A1 proteinCTDPMID:34186270
SLC27A1Human4-hydroxyphenyl retinamide decreases expressionISOSlc27a1 (Mus musculus)6480464Fenretinide results in decreased expression of SLC27A1 mRNACTDPMID:28973697
SLC27A1Human5-aza-2'-deoxycytidine affects expressionEXP 6480464Decitabine affects the expression of SLC27A1 mRNACTDPMID:23300844

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Biological Process
1 to 20 of 32 rows

  
Object Symbol
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Original Reference(s)
SLC27A1Humanadiponectin-activated signaling pathway acts_upstream_of_or_withinIEAUniProtKB:Q60714 and ensembl:ENSMUSP00000034267150520179 EnsemblGO_REF:0000107
SLC27A1Humanbiotin import across plasma membrane involved_inIDA 150520179 PMID:28035674ARUK-UCLPMID:28035674
SLC27A1Humanbiotin transport involved_inIDA 150520179 PMID:28035674ARUK-UCLPMID:28035674
SLC27A1Humanexport across plasma membrane involved_inIMP 150520179 PMID:31091338ARUK-UCLPMID:31091338
SLC27A1Humanexport across plasma membrane involved_inIDA 150520179 PMID:28035674ARUK-UCLPMID:28035674
SLC27A1Humanfatty acid metabolic process involved_inIEAUniProtKB-KW:KW-0276150520179 UniProtGO_REF:0000043
SLC27A1Humanfatty acid transport involved_inIEAARBA:ARBA00043302150520179 UniProtGO_REF:0000117
SLC27A1Humanfatty acid transport acts_upstream_of_or_withinIEAUniProtKB:Q60714 and ensembl:ENSMUSP00000034267150520179 EnsemblGO_REF:0000107
SLC27A1Humanglucose import in response to insulin stimulus involved_inIEAUniProtKB:Q60714 and ensembl:ENSMUSP00000034267150520179 EnsemblGO_REF:0000107
SLC27A1Humanglucose import in response to insulin stimulus involved_inISSUniProtKB:Q60714150520179 ARUK-UCLGO_REF:0000024
SLC27A1Humanlipid metabolic process involved_inIEAUniProtKB-KW:KW-0443150520179 UniProtGO_REF:0000043
SLC27A1Humanlipid transport involved_inIEAUniProtKB-KW:KW-0445150520179 UniProtGO_REF:0000043
SLC27A1Humanlipid transport across blood-brain barrier involved_inIMP 150520179 PMID:21395585ARUK-UCLPMID:21395585
SLC27A1Humanlong-chain fatty acid import across plasma membrane involved_inIDA 150520179 PMID:28035674ARUK-UCLPMID:28035674
SLC27A1Humanlong-chain fatty acid import across plasma membrane involved_inIMP 150520179 PMID:28035674ARUK-UCLPMID:28035674
SLC27A1Humanlong-chain fatty acid import into cell involved_inIMP 150520179 PMID:28178239UniProtPMID:28178239
SLC27A1Humanlong-chain fatty acid import into cell involved_inIBAMGI:1347098 more ...150520179 GO_CentralGO_REF:0000033
SLC27A1Humanlong-chain fatty acid import into cell involved_inISSUniProtKB:Q60714150520179 ARUK-UCLGO_REF:0000024
SLC27A1Humanlong-chain fatty acid import into cell involved_inIEAUniProtKB:Q60714 and ensembl:ENSMUSP00000034267150520179 EnsemblGO_REF:0000107
SLC27A1Humanlong-chain fatty acid metabolic process involved_inIBAMGI:1347099 more ...150520179 GO_CentralGO_REF:0000033
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Cellular Component
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Original Reference(s)
SLC27A1Humanbasal plasma membrane located_inISSUniProtKB:Q60714150520179 ARUK-UCLGO_REF:0000024
SLC27A1Humanbasal plasma membrane located_inIEAUniProtKB:Q60714 and ensembl:ENSMUSP00000034267150520179 EnsemblGO_REF:0000107
SLC27A1Humancaveola  ISOSlc27a1 (Rattus norvegicus)9068941adipocytesRGDPMID:16803459 and REF_RGD_ID:1642797
SLC27A1Humancytoplasm located_inIEAUniProtKB-SubCell:SL-0086150520179 UniProtGO_REF:0000044
SLC27A1Humancytoplasm located_inIEAUniProtKB-KW:KW-0963150520179 UniProtGO_REF:0000043
SLC27A1Humanendomembrane system located_inIEAUniProtKB-SubCell:SL-0147150520179 UniProtGO_REF:0000044
SLC27A1Humanendoplasmic reticulum located_inISSUniProtKB:Q60714150520179 ARUK-UCLGO_REF:0000024
SLC27A1Humanendoplasmic reticulum located_inIEAUniProtKB:Q60714 and ensembl:ENSMUSP00000034267150520179 EnsemblGO_REF:0000107
SLC27A1Humanendoplasmic reticulum membrane is_active_inIBAPANTHER:PTN001186241 more ...150520179 GO_CentralGO_REF:0000033
SLC27A1Humanmembrane located_inHDA 150520179 PMID:19946888UniProtPMID:19946888
SLC27A1Humanmembrane located_inIEAUniProtKB-KW:KW-0472150520179 UniProtGO_REF:0000043
SLC27A1Humanmitochondrial inner membrane located_inISOSlc27a1 (Rattus norvegicus)9068941 RGDPMID:19429947 and REF_RGD_ID:2312787
SLC27A1Humanplasma membrane located_inIEAUniProtKB:Q60714 and ensembl:ENSMUSP00000034267150520179 EnsemblGO_REF:0000107
SLC27A1Humanplasma membrane located_inIEAUniProtKB-SubCell:SL-0039150520179 UniProtGO_REF:0000044
SLC27A1Humanplasma membrane located_inIEAUniProtKB-KW:KW-1003150520179 UniProtGO_REF:0000043
SLC27A1Humanplasma membrane located_inTAS 150520179 ReactomeReactome:R-HSA-1989750 and Reactome:R-HSA-879585
SLC27A1Humanplasma membrane located_inIDA 150520179 PMID:28035674 and PMID:31091338ARUK-UCLPMID:28035674 and PMID:31091338
SLC27A1Humanplasma membrane is_active_inIBAMGI:1347098 more ...150520179 GO_CentralGO_REF:0000033
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Molecular Function
1 to 20 of 27 rows

  
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Original Reference(s)
SLC27A1Humanarachidonate-CoA ligase activity enablesIEARHEA:19713150520179 RHEAGO_REF:0000116
SLC27A1Humanarachidonate-CoA ligase activity enablesIEAEC:6.2.1.15150520179 UniProtGO_REF:0000003
SLC27A1Humanbiotin transmembrane transporter activity enablesIDA 150520179 PMID:28035674ARUK-UCLPMID:28035674
SLC27A1Humanefflux transmembrane transporter activity enablesIMP 150520179 PMID:31091338ARUK-UCLPMID:31091338
SLC27A1Humanefflux transmembrane transporter activity enablesIDA 150520179 PMID:28035674ARUK-UCLPMID:28035674
SLC27A1Humanfatty acid transmembrane transporter activity enablesIEAUniProtKB:Q60714 and ensembl:ENSMUSP00000034267150520179 EnsemblGO_REF:0000107
SLC27A1Humanfatty acid transmembrane transporter activity enablesTAS 150520179 ReactomeReactome:R-HSA-879585
SLC27A1Humanicosanoid transmembrane transporter activity enablesISOSlc27a1 (Mus musculus)9068941 PMID:7954810ReactomePMID:7954810
SLC27A1Humanidentical protein binding enablesIEAUniProtKB:Q60714 and ensembl:ENSMUSP00000034267150520179 EnsemblGO_REF:0000107
SLC27A1Humanligase activity enablesIEAUniProtKB-KW:KW-0436150520179 UniProtGO_REF:0000043
SLC27A1Humanlong-chain fatty acid transmembrane transporter activity enablesIMP 150520179 PMID:21395585 more ...ARUK-UCLPMID:21395585 more ...
SLC27A1Humanlong-chain fatty acid transmembrane transporter activity enablesIBAMGI:1347099 more ...150520179 GO_CentralGO_REF:0000033
SLC27A1Humanlong-chain fatty acid transmembrane transporter activity enablesIDA 150520179 PMID:28035674ARUK-UCLPMID:28035674
SLC27A1Humanlong-chain fatty acid-CoA ligase activity enablesISSUniProtKB:Q60714150520179 UniProtGO_REF:0000024
SLC27A1Humanlong-chain fatty acid-CoA ligase activity enablesIEARHEA:15421150520179 RHEAGO_REF:0000116
SLC27A1Humanlong-chain fatty acid-CoA ligase activity enablesIEAUniProtKB:Q60714 and ensembl:ENSMUSP00000034267150520179 EnsemblGO_REF:0000107
SLC27A1Humannucleotide binding enablesIEAUniProtKB-KW:KW-0547150520179 UniProtGO_REF:0000043
SLC27A1Humanoleoyl-CoA ligase activity enablesISSUniProtKB:Q60714150520179 ARUK-UCLGO_REF:0000024
SLC27A1Humanoleoyl-CoA ligase activity enablesIBAMGI:1347098 more ...150520179 GO_CentralGO_REF:0000033
SLC27A1Humanoleoyl-CoA ligase activity enablesIEAUniProtKB:Q60714 and ensembl:ENSMUSP00000034267150520179 EnsemblGO_REF:0000107
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Original Reference(s)
SLC27A1HumanHypertriglyceridemia  IAGP 1642793DNA:SNP:intron 8 A/G polymorphism in French womenRGD 

#
Reference Title
Reference Citation
1. Fatty acid transporter levels and palmitate oxidation rate correlate with ejection fraction in the infarcted rat heart. Heather LC, etal., Cardiovasc Res. 2006 Dec 1;72(3):430-7. Epub 2006 Sep 1.
2. Fiber type- and fatty acid composition-dependent effects of high-fat diets on rat muscle triacylglyceride and fatty acid transporter protein-1 content. Marotta M, etal., Metabolism. 2004 Aug;53(8):1032-6.
3. Intronic polymorphism in the fatty acid transport protein 1 gene is associated with increased plasma triglyceride levels in a French population. Meirhaeghe A, etal., Arterioscler Thromb Vasc Biol. 2000 May;20(5):1330-4.
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
5. FATP1 is an insulin-sensitive fatty acid transporter involved in diet-induced obesity. Wu Q, etal., Mol Cell Biol. 2006 May;26(9):3455-67.
PMID:7954810   PMID:9671728   PMID:10873384   PMID:12235169   PMID:12477932   PMID:12818409   PMID:15146197   PMID:15489334   PMID:15897321   PMID:15978856   PMID:18660489   PMID:19361580  
PMID:19523918   PMID:19913121   PMID:19946888   PMID:20356843   PMID:20360315   PMID:20416077   PMID:20628086   PMID:20965718   PMID:21395585   PMID:21873635   PMID:23024797   PMID:23528296  
PMID:24113382   PMID:24120574   PMID:24937540   PMID:25163924   PMID:25961023   PMID:26590417   PMID:26760575   PMID:26867681   PMID:28035674   PMID:28178239   PMID:28890335   PMID:29180619  
PMID:30199545   PMID:30280653   PMID:30674874   PMID:30970241   PMID:31091338   PMID:31575907   PMID:32457219   PMID:33486652   PMID:33961781   PMID:35575683   PMID:36215168   PMID:37314216  



SLC27A1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381917,468,767 - 17,506,168 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1917,468,769 - 17,506,168 (+)EnsemblGRCh38hg38GRCh38
GRCh371917,581,333 - 17,616,977 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361917,442,300 - 17,477,977 (+)NCBINCBI36Build 36hg18NCBI36
Celera1917,482,907 - 17,518,593 (+)NCBICelera
Cytogenetic Map19p13.11NCBI
HuRef1917,146,725 - 17,182,058 (+)NCBIHuRef
CHM1_11917,580,668 - 17,616,359 (+)NCBICHM1_1
T2T-CHM13v2.01917,602,871 - 17,640,805 (+)NCBIT2T-CHM13v2.0
Slc27a1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39872,021,372 - 72,039,951 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl872,021,526 - 72,039,946 (+)EnsemblGRCm39 Ensembl
GRCm38871,568,728 - 71,587,307 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl871,568,882 - 71,587,302 (+)EnsemblGRCm38mm10GRCm38
MGSCv37874,092,826 - 74,110,607 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36874,497,916 - 74,515,697 (+)NCBIMGSCv36mm8
Celera874,083,284 - 74,101,015 (+)NCBICelera
Cytogenetic Map8B3.3NCBI
cM Map834.43NCBI
Slc27a1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81618,311,859 - 18,337,024 (+)NCBIGRCr8
mRatBN7.21618,278,984 - 18,300,173 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1618,278,984 - 18,296,063 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1618,329,890 - 18,346,962 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01619,461,772 - 19,478,909 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01618,382,827 - 18,399,900 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01619,997,823 - 20,016,193 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1619,999,112 - 20,016,190 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01619,859,540 - 19,880,871 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41618,769,909 - 18,786,988 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11618,769,906 - 18,786,985 (+)NCBI
Celera1618,482,929 - 18,499,970 (+)NCBICelera
Cytogenetic Map16p14NCBI
Slc27a1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955524805,014 - 821,838 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955524803,793 - 821,920 (-)NCBIChiLan1.0ChiLan1.0
SLC27A1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22022,340,328 - 22,376,533 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11921,345,812 - 21,383,151 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01916,956,000 - 16,993,429 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11917,929,785 - 17,966,171 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1917,929,785 - 17,966,171 (+)Ensemblpanpan1.1panPan2
SLC27A1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12045,309,094 - 45,341,101 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2045,310,088 - 45,340,230 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2045,223,163 - 45,255,236 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02045,796,156 - 45,828,264 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2045,796,156 - 45,829,217 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12045,032,656 - 45,064,717 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02045,442,740 - 45,474,725 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02045,718,788 - 45,750,750 (-)NCBIUU_Cfam_GSD_1.0
Slc27a1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118203,877,674 - 203,901,327 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365963,427,874 - 3,449,489 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365963,426,807 - 3,451,259 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC27A1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl260,203,388 - 60,235,588 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1260,203,374 - 60,235,689 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2259,752,658 - 59,771,672 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SLC27A1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1615,967,126 - 15,995,039 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660743,430,291 - 3,458,931 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Slc27a1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624908531,308 - 549,990 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624908531,313 - 549,570 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in SLC27A1
59 total Variants

1 to 10 of 105 rows
Name
Type
Condition(s)
Position(s)
Clinical significance
GRCh38/hg38 20q11.22-12(chr20:34541747-39663219)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052766]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052766]|See cases [RCV000052766] Chr20:34541747..39663219 [GRCh38]
Chr20:33129551..38291861 [GRCh37]
Chr20:32593212..37725275 [NCBI36]
Chr20:20q11.22-12		 pathogenic
GRCh38/hg38 20q11.22-13.11(chr20:34249453-43359749)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053002]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053002]|See cases [RCV000053002] Chr20:34249453..43359749 [GRCh38]
Chr20:32837259..41988389 [GRCh37]
Chr20:32300920..41421803 [NCBI36]
Chr20:20q11.22-13.11		 pathogenic
GRCh38/hg38 20p12.2-q12(chr20:9811433-39316956)x3 copy number gain See cases [RCV000052999] Chr20:9811433..39316956 [GRCh38]
Chr20:9792081..37945599 [GRCh37]
Chr20:9740081..37379013 [NCBI36]
Chr20:20p12.2-q12		 pathogenic
NM_020336.3(RALGAPB):c.2236A>G (p.Arg746Gly) single nucleotide variant Malignant melanoma [RCV000072627] Chr20:38532850 [GRCh38]
Chr20:37161493 [GRCh37]
Chr20:36594907 [NCBI36]
Chr20:20q11.23		 not provided
NM_020336.3(RALGAPB):c.2237G>A (p.Arg746Lys) single nucleotide variant Malignant melanoma [RCV000063729] Chr20:38532851 [GRCh38]
Chr20:37161494 [GRCh37]
Chr20:36594908 [NCBI36]
Chr20:20q11.23		 not provided
GRCh38/hg38 20p13-q13.33(chr20:99557-64277321)x3 copy number gain See cases [RCV000135859] Chr20:99557..64277321 [GRCh38]
Chr20:80198..62908674 [GRCh37]
Chr20:28198..62379118 [NCBI36]
Chr20:20p13-q13.33		 pathogenic
GRCh38/hg38 20q11.22-13.12(chr20:35237946-47631818)x1 copy number loss See cases [RCV000140816] Chr20:35237946..47631818 [GRCh38]
Chr20:33825749..46260562 [GRCh37]
Chr20:33289165..45693969 [NCBI36]
Chr20:20q11.22-13.12		 pathogenic
NM_020336.4(RALGAPB):c.2324G>T (p.Arg775Leu) single nucleotide variant Septo-optic dysplasia sequence [RCV000509009] Chr20:38535152 [GRCh38]
Chr20:37163795 [GRCh37]
Chr20:20q11.23		 likely pathogenic
GRCh37/hg19 20p13-q13.33(chr20:61569-62915555)x3 copy number gain See cases [RCV000510832] Chr20:61569..62915555 [GRCh37]
Chr20:20p13-q13.33		 pathogenic
NM_020336.4(RALGAPB):c.1151G>A (p.Arg384Gln) single nucleotide variant not specified [RCV004298605] Chr20:38517605 [GRCh38]
Chr20:37146248 [GRCh37]
Chr20:20q11.23		 uncertain significance
1 to 10 of 105 rows

Predicted Target Of
Summary Value
Count of predictions:4640
Count of miRNA genes:1165
Interacting mature miRNAs:1472
Transcripts:ENST00000252595, ENST00000442725, ENST00000593701, ENST00000594962, ENST00000598424, ENST00000598848, ENST00000599380, ENST00000599965, ENST00000600277, ENST00000600297
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1300034BP50_HBlood pressure QTL 50 (human)2.10.00094Blood pressuresystolic191108946337089463Human
407051681GWAS700657_Hresponse to antidepressant QTL GWAS700657 (human)0.000003response to antidepressant191747947217479473Human

SLC27A1_7258  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371917,616,088 - 17,617,010UniSTSGRCh37
Build 361917,477,088 - 17,478,010RGDNCBI36
Celera1917,517,704 - 17,518,626RGD
HuRef1917,181,169 - 17,182,091UniSTS
D10S16   No map positions available.
SLC27A1  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371917,611,102 - 17,611,406UniSTSGRCh37
Celera1917,512,717 - 17,513,021UniSTS
HuRef1917,176,373 - 17,176,677UniSTS
D16S325  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map9q34.13UniSTS
Cytogenetic Map9q22.33UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map4q21.1UniSTS
Cytogenetic Map6q25.3UniSTS
Cytogenetic Map2q32.3UniSTS
Cytogenetic Map6q22UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map17q21.2-q21.3UniSTS
Cytogenetic Map13q14.3UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map2q33.3UniSTS
Cytogenetic Map20q13.32UniSTS
Cytogenetic Map1p21.2UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map12q13.2UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map12p13.32UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map8q22.3UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic Map1p13.1UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map4q25UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map7p22.2UniSTS
Cytogenetic Map7q33UniSTS
Cytogenetic Map1p31.3UniSTS
Cytogenetic Map16q24.1UniSTS
Cytogenetic Map6q13UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map10q11.2UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map3q13.32UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map6p22.3UniSTS
Cytogenetic Map12q22UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map3q22.1UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map6q25.2-q25.3UniSTS
Cytogenetic Map1p36.1UniSTS
Cytogenetic Map22q11.2UniSTS
Cytogenetic Map3q26.31UniSTS
Cytogenetic Map7p12.3UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map5p12UniSTS
Cytogenetic Map9q21.13UniSTS
Cytogenetic Map17q21.33UniSTS
Cytogenetic Map20p12.3-p11.21UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map2p13-p12UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map3q25.33UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic Map8q21.13UniSTS
Cytogenetic Map7q32.1UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map17q22UniSTS
Cytogenetic Map3p24.2UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic MapXp22.33UniSTS
Cytogenetic MapYp11.32UniSTS
Cytogenetic Map10q24.31UniSTS
Cytogenetic Map4q34.3UniSTS
Cytogenetic Map10p11.23UniSTS
Cytogenetic Map10p15.1UniSTS
Cytogenetic Map14q21.2UniSTS
Cytogenetic Map6p21.31UniSTS
Cytogenetic Map9p24.1-p23UniSTS
Cytogenetic Map15q15.3UniSTS
Cytogenetic Map12q12UniSTS
Cytogenetic Map5q32UniSTS
Cytogenetic Map10pter-q25.3UniSTS
Cytogenetic Map6q25.2-q27UniSTS
Cytogenetic Map15q26.3UniSTS
Cytogenetic Map15q14UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map1q21.2UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map11p11.2UniSTS
Cytogenetic Map17q21.32UniSTS
Cytogenetic Map11p15.5UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map7p21.1UniSTS
Cytogenetic Map17q23.2UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic Map1p36.3-p34.3UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map4p15.2UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map2q24.3UniSTS
Cytogenetic Map1q25.2UniSTS
Cytogenetic Map6q27UniSTS
Cytogenetic Map12q14.3UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic Map3q27.1UniSTS
Cytogenetic Map15q11.2UniSTS
Cytogenetic Map6p21.33UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map2q12.2UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map3p26UniSTS
Cytogenetic MapXq28UniSTS
Cytogenetic Map3p14.3UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map10q21-q22UniSTS
Cytogenetic Map5q22UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map10q22.2UniSTS
Cytogenetic Map8p22UniSTS
Cytogenetic Map22q11.23UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map12q14.2UniSTS
Cytogenetic Map11q22.3UniSTS
Cytogenetic Map10q26.11UniSTS
Cytogenetic Map10q25.3UniSTS
Cytogenetic Map6q22.32UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map19q13.31UniSTS
Cytogenetic Map17p13.1UniSTS
Cytogenetic Map12q23.3UniSTS
Cytogenetic Map3q21UniSTS
Cytogenetic Map3q21.3UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map13q14.11UniSTS
Cytogenetic Map7q36UniSTS
Cytogenetic Map4q26UniSTS
Cytogenetic Map19qterUniSTS
Cytogenetic Map7p13-p12UniSTS
Cytogenetic Map2p22UniSTS
Cytogenetic Map2q14.3UniSTS
Cytogenetic Map19q13.4UniSTS
D1S1425  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map1p33UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map1p31.3UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map6q25.3UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map2p13.1UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map4q21.23UniSTS
Cytogenetic Map22q12.1UniSTS
Cytogenetic Map8q24.13UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map1q23.1UniSTS
Cytogenetic Map10q22UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map10p14UniSTS
Cytogenetic Map6p21.33UniSTS
Cytogenetic Map10q26.3UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map7p22.2UniSTS
Cytogenetic Map12q13.12UniSTS
Cytogenetic Map18p11.21UniSTS
Cytogenetic Map14q32.12UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map18p11.31UniSTS
Cytogenetic Map13q34UniSTS
Cytogenetic Map4p14UniSTS
Cytogenetic Map8p23.1UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map3q21.3UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map8q12.1UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map10p12UniSTS
Cytogenetic Map12q13UniSTS
Cytogenetic Map11p15.4UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map8q24UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map5q13.2UniSTS
Cytogenetic Map5q32UniSTS
Cytogenetic Map1q21.2UniSTS
Cytogenetic Map3q26.2UniSTS
Cytogenetic Map6q25.2-q25.3UniSTS
Cytogenetic Map20q11.2-q13.2UniSTS
Cytogenetic Map12q13.3UniSTS
Cytogenetic Map1q21-q23UniSTS
Cytogenetic Map17q21.32UniSTS
Cytogenetic Map1p35.3UniSTS
Cytogenetic Map1p12UniSTS
Cytogenetic Map2p23-p22UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map2p16.1UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map16q12.1UniSTS
Cytogenetic Map17q22-q23UniSTS
Cytogenetic Map2p11.1UniSTS
Cytogenetic Map16q12.2UniSTS
Cytogenetic Map2p12-p11.2UniSTS
Cytogenetic Map3q11.1UniSTS
Cytogenetic Map2p21UniSTS
Cytogenetic Map17q11.2-q12UniSTS
Cytogenetic Map2q37.1UniSTS
Cytogenetic Map1p32-p31UniSTS
Cytogenetic Map1p21.3UniSTS
Cytogenetic Map1q32.2UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map7q21-q22UniSTS
Cytogenetic Map1q25.3UniSTS
Cytogenetic Map18p11.3-p11.2UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map21p11.1UniSTS
Cytogenetic Map12q24.31-q24.32UniSTS
Cytogenetic Map9q33.2UniSTS
Cytogenetic Map11q13.5UniSTS
Cytogenetic Map12p12.2-p11.2UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map2q14.3UniSTS
Cytogenetic Map19p13.3-p13.2UniSTS
Cytogenetic Map7q32.1UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map17q22-q23.2UniSTS
Cytogenetic Map3q27.1UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map4q21.21UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic Map14q24.2UniSTS
Cytogenetic Map20q13.33UniSTS
Cytogenetic Map3p21UniSTS
Cytogenetic Map10p11.23UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map1q25.2UniSTS
Cytogenetic Map18q12.1UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map15q23UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map13q12.11UniSTS
Cytogenetic Map1p36.31UniSTS
Cytogenetic Map3q21.1UniSTS
Cytogenetic Map12p12UniSTS
Cytogenetic Map21q22.11UniSTS
Cytogenetic Map15q15.3UniSTS
Cytogenetic MapXq12-q13UniSTS
Cytogenetic Map22q11.2UniSTS
Cytogenetic Map7q31.1-q31.3UniSTS
Cytogenetic MapXp22.11UniSTS
Cytogenetic Map3p21.1-p14.2UniSTS
Cytogenetic Map2p24UniSTS
Cytogenetic Map20p12.1UniSTS
Cytogenetic Map3q26.33UniSTS
Cytogenetic Map12q13.11-q14.3UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map9q21.33UniSTS
Cytogenetic Map12q12UniSTS
Cytogenetic MapXq13-q21UniSTS
Cytogenetic Map8q24.22UniSTS
Cytogenetic Map11p13UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map6q25.2-q27UniSTS
Cytogenetic Map12q24.32UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic MapXq13.1UniSTS
Cytogenetic Map22q12.2UniSTS
Cytogenetic Map14q12UniSTS
Cytogenetic Map12q23-q24.1UniSTS
Cytogenetic Map4q35.1UniSTS
Cytogenetic Map17q24.1UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map14q21UniSTS
Cytogenetic Map9p24.3UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map2p14UniSTS
Cytogenetic Map21q22.2UniSTS
Cytogenetic Map2q12.3UniSTS
Cytogenetic Map8p21.1UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map3q25.33UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic Map1p34UniSTS
Cytogenetic Map19p13.1UniSTS
Cytogenetic Map5q14.1UniSTS
Cytogenetic MapXq22.3UniSTS
Cytogenetic Map7p21.1UniSTS
Cytogenetic Map6p25.2UniSTS
Cytogenetic Map10q23.33UniSTS
Cytogenetic Map15q11-q12UniSTS
Cytogenetic Map3p22.2UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map15q21.1-q21.2UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map4q13.3UniSTS
Cytogenetic Map19p13.13UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map17q24.3UniSTS
Cytogenetic Map12p13.33UniSTS
Cytogenetic Map11q14.1UniSTS
Cytogenetic Map3p22-p21.3UniSTS
Cytogenetic Map16q22.3UniSTS
Cytogenetic Map1p22.1UniSTS
Cytogenetic Map6p12.1UniSTS
Cytogenetic Map19q13.33-q13.41UniSTS
Cytogenetic Map2p25.3UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map5p12UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map7q35UniSTS
Cytogenetic Map17p12UniSTS
Cytogenetic Map7q11.1UniSTS
Cytogenetic Map2p25.1-p24.1UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map4q31.21UniSTS
Cytogenetic Map5p13.1UniSTS
Cytogenetic MapXq22.1UniSTS
Cytogenetic Map9q21.11UniSTS
Cytogenetic Map5q13UniSTS
Cytogenetic Map1p22.2UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map12q24UniSTS
Cytogenetic MapXq24UniSTS
Cytogenetic Map1q24.2UniSTS
Cytogenetic Map22q13.31UniSTS
Cytogenetic Map8p11.23UniSTS
Cytogenetic Map1q23.3UniSTS
Cytogenetic Map16p12UniSTS
Cytogenetic Map10p15-p14UniSTS
Cytogenetic Map19q13UniSTS
Cytogenetic Map1q22-q23UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map7q31UniSTS
Cytogenetic Map10q26UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map6p22.3UniSTS
Cytogenetic Map6p21.2UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map11q24.2UniSTS
Cytogenetic MapXq28UniSTS
Cytogenetic Map1p33-p32UniSTS
Cytogenetic Map5q35.2UniSTS
Cytogenetic Map3p14.3UniSTS
Cytogenetic Map12q24.33UniSTS
Cytogenetic Map3q26.1-q26.2UniSTS
Cytogenetic Map12p13UniSTS
Cytogenetic Map7q36.1UniSTS
Cytogenetic Map8p11.21UniSTS
Cytogenetic Map12q13.1-q13.2UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map19q13.33UniSTS
Cytogenetic Map16p12.3UniSTS
Cytogenetic Map13q14.11UniSTS
Cytogenetic Map9p13.2UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map3q13.2UniSTS
Cytogenetic Map8p22UniSTS
Cytogenetic Map22q11.23UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map1q42.3UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map5q12.3UniSTS
Cytogenetic Map20q11.21UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map12q14.3UniSTS
Cytogenetic Map6q15UniSTS
Cytogenetic Map6q22.32UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map19q13.31UniSTS
Cytogenetic Map16p13.11UniSTS
Cytogenetic Map10q24.32UniSTS
Cytogenetic Map4p16.1UniSTS
Cytogenetic Map18q11.1UniSTS
Cytogenetic Map16q23.2UniSTS
Cytogenetic Map3q12.1UniSTS
Cytogenetic Map15q24-q25UniSTS
Cytogenetic Map7q31.1UniSTS
Cytogenetic Map15q26.1UniSTS
Cytogenetic Map8q13.1UniSTS
Cytogenetic Map6pter-p12.1UniSTS
Cytogenetic Map6q16UniSTS
Cytogenetic Map12q14.1UniSTS
Cytogenetic Map17q21.2UniSTS
Cytogenetic Map9q22.2UniSTS
Cytogenetic Map17q23.2UniSTS
Cytogenetic Map11q23.1-q23.2UniSTS
Cytogenetic Map13q14UniSTS
Cytogenetic Map4q23UniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map11q24.3UniSTS
Cytogenetic Map7p14UniSTS
Cytogenetic Map15q24.1UniSTS
Cytogenetic Map16q24.2UniSTS
Cytogenetic Map12q13.11UniSTS
Cytogenetic Map9p13.3UniSTS
Cytogenetic Map8q22.1UniSTS
Cytogenetic Map6q16.2UniSTS
Cytogenetic Map5p15.2UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic Map14q22.3UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map12q13.2UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map3q29UniSTS
Cytogenetic Map5q23.3-q31.1UniSTS
Cytogenetic Map1p36UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map12p13.31UniSTS
Cytogenetic Map3q12.3UniSTS
Cytogenetic Map11q23UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map20q11UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map5q23.3UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map1q42UniSTS
Cytogenetic MapXp11.23UniSTS
Cytogenetic Map12q24.13UniSTS
Cytogenetic Map3q27.3UniSTS
Cytogenetic Map14q21.3UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map2p15UniSTS
Cytogenetic Map17q22UniSTS
Cytogenetic Map20q13.32UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic MapXq21.1UniSTS
D10S16  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map3p24.2UniSTS
Cytogenetic Map21q21.3UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map16q24.1UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic Map11q24.2UniSTS
Cytogenetic Map5q23.3-q31.1UniSTS
Cytogenetic Map7q32UniSTS
Cytogenetic Map1q21-q23UniSTS
Cytogenetic MapXp11.23UniSTS
Cytogenetic Map2q11.2-q12UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map1p36.21UniSTS
Cytogenetic Map3p22UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map2p12UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map9p13.3-p12UniSTS
Cytogenetic Map3p21.1UniSTS
Cytogenetic Map5p13.1UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map2p25.2UniSTS
Cytogenetic Map5q21-q22UniSTS
Cytogenetic Map2p22.1UniSTS
Cytogenetic Map1q32.3UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map18q12UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map3q27.3UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map2p15UniSTS
Cytogenetic Map20q13.32UniSTS
Cytogenetic Map10q26UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map7q21.13UniSTS
Cytogenetic Map1p33UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map9q22.3UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map12q13.2UniSTS
Cytogenetic Map22q13.31-q13.33UniSTS
Cytogenetic Map1q24.1UniSTS
Cytogenetic Map7q32.2UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map1q42.11UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map19p13.1UniSTS
Cytogenetic Map11q13.5UniSTS
Cytogenetic Map11q24UniSTS
Cytogenetic Map2q11.2-q12.1UniSTS
Cytogenetic Map3q21.2UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map19p13UniSTS
Cytogenetic Map8p11.21UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map20q12UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic Map17q22.2UniSTS
Cytogenetic Map18q21UniSTS
Cytogenetic Map11q14.2UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map4q34UniSTS
Cytogenetic Map2p22-p21UniSTS
Cytogenetic Map10q26.3UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map2q37.1UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map1p36.23UniSTS
Cytogenetic Map7p22.2UniSTS
Cytogenetic Map12q24.13UniSTS
Cytogenetic Map8p21.2UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map14q32.12UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map1p36.31UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic MapXq26.3UniSTS
Cytogenetic Map8p23.1UniSTS
Cytogenetic Map6q13UniSTS
Cytogenetic Map3p21.31UniSTS
Cytogenetic Map9p13.2UniSTS
Cytogenetic Map17q25UniSTS
Cytogenetic Map9q22.2UniSTS
Cytogenetic Map14q32.33UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map13q12.11UniSTS
Cytogenetic Map16p13.13UniSTS
Cytogenetic Map11p15.4UniSTS
Cytogenetic Map7q22UniSTS
Cytogenetic Map3q21UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map22q13UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map11p15.3-p15.1UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map10q22.2UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map7p22.3UniSTS
Cytogenetic Map3p21UniSTS
Cytogenetic MapXp22.3UniSTS
Cytogenetic Map1q42.3UniSTS
Cytogenetic Map18q11.2UniSTS
Cytogenetic Map6p24.3UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map1q25UniSTS
Cytogenetic Map15q11.2UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map3q26UniSTS
Cytogenetic Map12p12.1-p11.2UniSTS
Cytogenetic Map11q23.1UniSTS
Cytogenetic Map13q14.11UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map7p15.2UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map10q11.22UniSTS
Cytogenetic Map5p12UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map9q21.13UniSTS
Cytogenetic Map5q13.2UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic MapXq23UniSTS
Cytogenetic Map2p21UniSTS
Cytogenetic Map22q11.1UniSTS
Cytogenetic Map16q13UniSTS
Cytogenetic Map16pUniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic MapXp11.3UniSTS
Cytogenetic Map1q25.1UniSTS
Cytogenetic Map10q23-q24UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map7q31UniSTS
Cytogenetic Map6q23.3UniSTS
Cytogenetic MapXp22.2UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map20q11.22UniSTS
Cytogenetic Map4q35.1UniSTS
Cytogenetic Map3q21.3UniSTS
Cytogenetic Map5q12.3UniSTS
Cytogenetic Map6q25.1UniSTS
Cytogenetic Map14q24.1UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map14q23.2UniSTS
Cytogenetic Map15q24.1UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map8q23.1UniSTS
Cytogenetic Map2q14.3UniSTS
Cytogenetic Map20q13.33UniSTS
Cytogenetic Map21q22.11UniSTS
Cytogenetic Map5p15.1UniSTS
Cytogenetic Map15q13.1UniSTS
Cytogenetic Map15q26.1UniSTS
Cytogenetic Map7q32.1UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map1p31.1UniSTS
Cytogenetic Map17qterUniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map12q22UniSTS
Cytogenetic Map16q22.2UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic MapXp22.33UniSTS
Cytogenetic MapYp11.32UniSTS
Cytogenetic Map14q24.2UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map13q34UniSTS
Cytogenetic Map10p11.23UniSTS
Cytogenetic Map15q15.2UniSTS
Cytogenetic Map8p21.1UniSTS
Cytogenetic Map22q12.2UniSTS
Cytogenetic Map15q22.2UniSTS
Cytogenetic Map15q21UniSTS
Cytogenetic Map6p21.31UniSTS
Cytogenetic Map10q23.1UniSTS
Cytogenetic Map1p36.2UniSTS
Cytogenetic Map2p16.1UniSTS
Cytogenetic Map22q11.2UniSTS
Cytogenetic Map17q23.3UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map20q12-q13.12UniSTS
Cytogenetic Map3q26.33UniSTS
Cytogenetic Map5q31.2-q34UniSTS
Cytogenetic Map5q31.2UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic MapXq13-q21UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map1pter-q31.3UniSTS
Cytogenetic Map15q21.1UniSTS
Cytogenetic Map3q13.33UniSTS
Cytogenetic MapXq13.1UniSTS
Cytogenetic Map3p23-p21UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map1p34.1UniSTS
Cytogenetic Map2q21.1UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map17q21.33UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map10q11.21UniSTS
Cytogenetic Map16q22UniSTS
Cytogenetic Map2q24UniSTS
Cytogenetic Map1q23.3UniSTS
Cytogenetic Map3q13.13UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map16p13.1UniSTS
Cytogenetic Map19q13.11UniSTS
Cytogenetic MapXp22.12UniSTS
Cytogenetic Map9q21.33UniSTS
Cytogenetic Map5q32UniSTS
Cytogenetic Map16q11.2UniSTS
Cytogenetic Map10p12.31UniSTS
Cytogenetic Map3q25.33UniSTS
Cytogenetic Map8q21.2UniSTS
Cytogenetic Map10q26.13UniSTS
Cytogenetic Map10q25.3UniSTS
Cytogenetic Map15q14-q15UniSTS
Cytogenetic Map8p11.2UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map4p15.2UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map7p21.1UniSTS
Cytogenetic Map1p36.32UniSTS
Cytogenetic Map1p36.1-p34UniSTS
Cytogenetic Map4p13UniSTS
Cytogenetic Map7q31.1-q31.2UniSTS
Cytogenetic Map8q22.2UniSTS
Cytogenetic Map15q21.1-q21.2UniSTS
Cytogenetic Map16q21UniSTS
Cytogenetic MapXq12UniSTS
Cytogenetic Map7q36.1UniSTS
Cytogenetic Map7p14.1UniSTS
Cytogenetic Map6p23UniSTS
Cytogenetic Map3p11.1UniSTS
Cytogenetic Map15q21.3UniSTS
Cytogenetic Map13q12UniSTS
Cytogenetic Map12q23.2UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map16q22.3UniSTS
Cytogenetic MapXq21UniSTS
Cytogenetic Map15q15UniSTS
Cytogenetic Map4q25UniSTS
Cytogenetic Map3q22.1UniSTS
Cytogenetic Map1q25.2UniSTS
Cytogenetic Map11q14.3UniSTS
Cytogenetic Map10q21.3UniSTS
Cytogenetic Map14q11.2UniSTS
Cytogenetic Map15q24.2UniSTS
Cytogenetic Map2p14UniSTS
Cytogenetic Map7q11.1UniSTS
Cytogenetic Map6p21UniSTS
Cytogenetic Map2p25.1-p24.1UniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map4q13.3UniSTS
Cytogenetic Map12p11.21UniSTS
Cytogenetic Map18q21.3UniSTS
Cytogenetic Map17p13UniSTS
Cytogenetic Map8q12UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map21q22.13UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map17q24.3UniSTS
Cytogenetic Map1p21UniSTS
Cytogenetic MapXq24UniSTS
Cytogenetic Map2q34UniSTS
Cytogenetic Map8p11.23UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map9q33.3UniSTS
Cytogenetic Map16p12UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map12q15UniSTS
Cytogenetic Map2q12.2UniSTS
Cytogenetic Map8p12UniSTS
Cytogenetic Map7q22.3UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map4q35UniSTS
Cytogenetic Map19q13.1-q13.2UniSTS
Cytogenetic Map16p13.12UniSTS
Cytogenetic Map9q34.1UniSTS
Cytogenetic Map7q36.2UniSTS
Cytogenetic Map3p23UniSTS
Cytogenetic Map6p25UniSTS
Cytogenetic Map9q22.1-q22.2UniSTS
Cytogenetic Map3q26.1-q26.2UniSTS
Cytogenetic Map5q31-q34UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map12p13UniSTS
Cytogenetic Map4q26UniSTS
Cytogenetic Map4p15.3UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map1p32-p31UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map3q13.2UniSTS
Cytogenetic Map2q33.3UniSTS
Cytogenetic Map8p22UniSTS
Cytogenetic Map22q11.23UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map18q21.32UniSTS
Cytogenetic Map15q26.3UniSTS
Cytogenetic Map12q14.2UniSTS
Cytogenetic Map2q31.1-q31.2UniSTS
Cytogenetic Map12q13.11UniSTS
Cytogenetic Map9p13.3UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map6p12.3UniSTS
Cytogenetic Map6q22.32UniSTS
Cytogenetic Map5q15UniSTS
Cytogenetic Map3p14.2UniSTS
Cytogenetic Map3p25.1UniSTS
Cytogenetic Map3q27.1UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map2q37UniSTS
Cytogenetic Map19q13.31UniSTS
Cytogenetic Map4q23UniSTS
Cytogenetic Map16q24.3UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map10q22.1UniSTS
Cytogenetic Map18q11.1UniSTS
Cytogenetic Map16q23.2UniSTS
Cytogenetic Map12q13UniSTS
Cytogenetic Map18q21.1UniSTS
Cytogenetic Map12q12-q13UniSTS
Cytogenetic Map9p22.3UniSTS
Cytogenetic Map6p21.2UniSTS
Cytogenetic Map6p22.1UniSTS
Cytogenetic Map11p15.1UniSTS
Cytogenetic Map19qterUniSTS
Cytogenetic Map20q13.3-qterUniSTS
Cytogenetic Map12q14.1UniSTS
Cytogenetic Map7p11UniSTS
Cytogenetic Map7p15UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map16p12.3UniSTS
Cytogenetic Map3q29UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map13q14UniSTS
Cytogenetic Map17pUniSTS
Cytogenetic Map11p14.1UniSTS
Cytogenetic Map2p13.2UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map10q11.23UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic Map13q22.1UniSTS
Cytogenetic Map17p13.1UniSTS
Cytogenetic Map14q23.3UniSTS
Cytogenetic Map3q26.2UniSTS




adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
pharyngeal arch
renal system
reproductive system
respiratory system
sensory system
visual system
1204 2439 2788 2253 4974 1726 2351 6 624 1951 465 2270 7306 6472 53 3734 1 852 1744 1617 175 1


1 to 30 of 32 rows
RefSeq Transcripts NM_198580 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011528000 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011528001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011528002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011528003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017026781 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047438789 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047438790 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047438791 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047438792 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054320935 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054320936 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054320937 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054320938 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054320939 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054320940 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054320941 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001753680 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001753681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC010319 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC010618 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK131101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK294238 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK296355 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK299852 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK315935 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AX101332 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC013149 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC059399 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471106 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 30 of 32 rows

Ensembl Acc Id: ENST00000252595   ⟹   ENSP00000252595
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1917,470,524 - 17,506,168 (+)Ensembl
Ensembl Acc Id: ENST00000593701
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1917,488,760 - 17,500,555 (+)Ensembl
Ensembl Acc Id: ENST00000594962
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1917,495,415 - 17,506,168 (+)Ensembl
Ensembl Acc Id: ENST00000598424   ⟹   ENSP00000472313
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1917,470,489 - 17,504,986 (+)Ensembl
Ensembl Acc Id: ENST00000598848
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1917,499,870 - 17,504,601 (+)Ensembl
Ensembl Acc Id: ENST00000599380   ⟹   ENSP00000469459
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1917,470,528 - 17,499,398 (+)Ensembl
Ensembl Acc Id: ENST00000599965   ⟹   ENSP00000470457
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1917,500,366 - 17,504,900 (+)Ensembl
Ensembl Acc Id: ENST00000600277   ⟹   ENSP00000472082
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1917,468,769 - 17,497,314 (+)Ensembl
Ensembl Acc Id: ENST00000600297   ⟹   ENSP00000469881
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1917,470,538 - 17,489,065 (+)Ensembl
RefSeq Acc Id: NM_198580   ⟹   NP_940982
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381917,470,524 - 17,506,168 (+)NCBI
GRCh371917,581,300 - 17,616,977 (+)ENTREZGENE
Build 361917,442,300 - 17,477,977 (+)NCBI Archive
HuRef1917,146,725 - 17,182,058 (+)ENTREZGENE
CHM1_11917,580,621 - 17,616,359 (+)NCBI
T2T-CHM13v2.01917,605,160 - 17,640,805 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011528000   ⟹   XP_011526302
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381917,468,767 - 17,506,168 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011528002   ⟹   XP_011526304
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381917,469,597 - 17,506,168 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011528003   ⟹   XP_011526305
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381917,468,767 - 17,506,168 (+)NCBI
Sequence:
RefSeq Acc Id: XM_047438789   ⟹   XP_047294745
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381917,469,597 - 17,506,168 (+)NCBI
RefSeq Acc Id: XM_047438790   ⟹   XP_047294746
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381917,469,981 - 17,506,168 (+)NCBI
RefSeq Acc Id: XM_047438791   ⟹   XP_047294747
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381917,470,524 - 17,500,404 (+)NCBI
RefSeq Acc Id: XM_047438792   ⟹   XP_047294748
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381917,470,524 - 17,500,404 (+)NCBI
RefSeq Acc Id: XM_054320935   ⟹   XP_054176910
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01917,603,352 - 17,640,805 (+)NCBI
RefSeq Acc Id: XM_054320936   ⟹   XP_054176911
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01917,604,245 - 17,640,805 (+)NCBI
RefSeq Acc Id: XM_054320937   ⟹   XP_054176912
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01917,604,187 - 17,640,805 (+)NCBI
RefSeq Acc Id: XM_054320938   ⟹   XP_054176913
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01917,604,617 - 17,640,805 (+)NCBI
RefSeq Acc Id: XM_054320939   ⟹   XP_054176914
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01917,602,871 - 17,640,805 (+)NCBI
RefSeq Acc Id: XM_054320940   ⟹   XP_054176915
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01917,605,160 - 17,635,047 (+)NCBI
RefSeq Acc Id: XM_054320941   ⟹   XP_054176916
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01917,605,160 - 17,635,047 (+)NCBI
1 to 30 of 30 rows
Protein RefSeqs NP_940982 (Get FASTA)   NCBI Sequence Viewer  
  XP_011526302 (Get FASTA)   NCBI Sequence Viewer  
  XP_011526304 (Get FASTA)   NCBI Sequence Viewer  
  XP_011526305 (Get FASTA)   NCBI Sequence Viewer  
  XP_047294745 (Get FASTA)   NCBI Sequence Viewer  
  XP_047294746 (Get FASTA)   NCBI Sequence Viewer  
  XP_047294747 (Get FASTA)   NCBI Sequence Viewer  
  XP_047294748 (Get FASTA)   NCBI Sequence Viewer  
  XP_054176910 (Get FASTA)   NCBI Sequence Viewer  
  XP_054176911 (Get FASTA)   NCBI Sequence Viewer  
  XP_054176912 (Get FASTA)   NCBI Sequence Viewer  
  XP_054176913 (Get FASTA)   NCBI Sequence Viewer  
  XP_054176914 (Get FASTA)   NCBI Sequence Viewer  
  XP_054176915 (Get FASTA)   NCBI Sequence Viewer  
  XP_054176916 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH13149 (Get FASTA)   NCBI Sequence Viewer  
  AAH59399 (Get FASTA)   NCBI Sequence Viewer  
  BAC85151 (Get FASTA)   NCBI Sequence Viewer  
  BAH11711 (Get FASTA)   NCBI Sequence Viewer  
  BAH12327 (Get FASTA)   NCBI Sequence Viewer  
  BAH13148 (Get FASTA)   NCBI Sequence Viewer  
  BAH14306 (Get FASTA)   NCBI Sequence Viewer  
  CAC36512 (Get FASTA)   NCBI Sequence Viewer  
  EAW84609 (Get FASTA)   NCBI Sequence Viewer  
  EAW84610 (Get FASTA)   NCBI Sequence Viewer  
  EAW84611 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000252595
  ENSP00000252595.6
  ENSP00000472313.1
GenBank Protein Q6PCB7 (Get FASTA)   NCBI Sequence Viewer  
1 to 30 of 30 rows
1 to 5 of 21 rows
1 to 5 of 21 rows
RefSeq Acc Id: NP_940982   ⟸   NM_198580
- UniProtKB: Q6PCB7 (UniProtKB/Swiss-Prot),   B7Z662 (UniProtKB/Swiss-Prot),   A6NIH2 (UniProtKB/Swiss-Prot),   B7Z3U1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011526302   ⟸   XM_011528000
- Peptide Label: isoform X1
- UniProtKB: B7Z3U1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011526305   ⟸   XM_011528003
- Peptide Label: isoform X2
- UniProtKB: Q6PCB7 (UniProtKB/Swiss-Prot),   B7Z662 (UniProtKB/Swiss-Prot),   A6NIH2 (UniProtKB/Swiss-Prot),   B7Z3U1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011526304   ⟸   XM_011528002
- Peptide Label: isoform X1
- UniProtKB: B7Z3U1 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSP00000252595   ⟸   ENST00000252595
AMP-binding enzyme C-terminal   AMP-dependent synthetase/ligase

Name Modeler Protein Id AA Range Protein Structure
AF-Q6PCB7-F1-model_v2 AlphaFold Q6PCB7 1-646 view protein structure

RGD ID:6795442
Promoter ID:HG_KWN:29250
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell_12Hour,   HeLa_S3,   K562,   Lymphoblastoid
Transcripts:ENST00000300969,   NM_198580,   UC002NGT.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361917,441,431 - 17,442,477 (+)MPROMDB
RGD ID:6811744
Promoter ID:HG_ACW:40429
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:HeLa_S3
Transcripts:SLC27A1.EAPR07
Position:
Human AssemblyChrPosition (strand)Source
Build 361917,460,541 - 17,461,041 (+)MPROMDB
RGD ID:6796046
Promoter ID:HG_KWN:29251
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour
Transcripts:UC002NGV.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361917,467,941 - 17,468,441 (+)MPROMDB
RGD ID:7239047
Promoter ID:EPDNEW_H25268
Type:initiation region
Name:SLC27A1_2
Description:solute carrier family 27 member 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H25269  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381917,468,792 - 17,468,852EPDNEW
RGD ID:7239045
Promoter ID:EPDNEW_H25269
Type:initiation region
Name:SLC27A1_1
Description:solute carrier family 27 member 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H25268  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381917,470,530 - 17,470,590EPDNEW


1 to 36 of 36 rows
Database
Acc Id
Source(s)
COSMIC SLC27A1 COSMIC
Ensembl Genes ENSG00000130304 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000252595 ENTREZGENE
  ENST00000252595.12 UniProtKB/Swiss-Prot
  ENST00000598424.5 UniProtKB/Swiss-Prot
Gene3D-CATH 3.30.300.30 UniProtKB/Swiss-Prot
  3.40.50.12780 UniProtKB/Swiss-Prot
GTEx ENSG00000130304 GTEx
HGNC ID HGNC:10995 ENTREZGENE
Human Proteome Map SLC27A1 Human Proteome Map
InterPro AMP-bd_C UniProtKB/Swiss-Prot
  AMP-bd_C_sf UniProtKB/Swiss-Prot
  AMP-binding_CS UniProtKB/Swiss-Prot
  AMP-dep_Synth/Lig UniProtKB/Swiss-Prot
  AMP-dep_Synthh-like_sf UniProtKB/Swiss-Prot
KEGG Report hsa:376497 UniProtKB/Swiss-Prot
NCBI Gene SLC27A1 ENTREZGENE
OMIM 600691 OMIM
PANTHER LONG-CHAIN FATTY ACID TRANSPORT PROTEIN UniProtKB/Swiss-Prot
  PTHR43107:SF7 UniProtKB/Swiss-Prot
Pfam AMP-binding UniProtKB/Swiss-Prot
  AMP-binding_C UniProtKB/Swiss-Prot
PharmGKB PA35869 PharmGKB
PROSITE AMP_BINDING UniProtKB/Swiss-Prot
Superfamily-SCOP Acetyl-CoA synthetase-like UniProtKB/Swiss-Prot
UniProt A6NIH2 ENTREZGENE
  B7Z225_HUMAN UniProtKB/TrEMBL
  B7Z3U1 ENTREZGENE, UniProtKB/TrEMBL
  B7Z662 ENTREZGENE
  M0QXY2_HUMAN UniProtKB/TrEMBL
  M0QZC9_HUMAN UniProtKB/TrEMBL
  Q6PCB7 ENTREZGENE
  Q96DY3_HUMAN UniProtKB/TrEMBL
  S27A1_HUMAN UniProtKB/Swiss-Prot
UniProt Secondary A6NIH2 UniProtKB/Swiss-Prot
  B7Z662 UniProtKB/Swiss-Prot
1 to 36 of 36 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-02-23 SLC27A1  solute carrier family 27 member 1    solute carrier family 27 (fatty acid transporter), member 1  Symbol and/or name change 5135510 APPROVED