Enpp5 (ectonucleotide pyrophosphatase/phosphodiesterase family member 5) - Rat Genome Database

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Gene: Enpp5 (ectonucleotide pyrophosphatase/phosphodiesterase family member 5) Rattus norvegicus
Analyze
Symbol: Enpp5
Name: ectonucleotide pyrophosphatase/phosphodiesterase family member 5
RGD ID: 1359199
Description: Predicted to enable NAD+ diphosphatase activity and zinc ion binding activity. Involved in cell communication. Located in plasma membrane. Orthologous to human ENPP5 (ectonucleotide pyrophosphatase/phosphodiesterase family member 5); INTERACTS WITH (+)-schisandrin B; 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: E-NPP 5; E-NPP5; ectonucleotide pyrophosphatase/phosphodiesterase 5; MGC105517; NPP-5; Npp5
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8924,407,574 - 24,415,029 (-)NCBIGRCr8
mRatBN7.2916,910,187 - 16,917,633 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl916,910,831 - 16,917,480 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx925,494,836 - 25,501,470 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0930,569,359 - 30,575,993 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0928,858,569 - 28,865,203 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0919,469,276 - 19,476,684 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl919,469,706 - 19,476,646 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0918,347,773 - 18,355,164 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4912,574,480 - 12,581,130 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1912,571,802 - 12,578,452 (-)NCBI
Celera914,637,055 - 14,643,705 (-)NCBICelera
Cytogenetic Map9q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. Characterization of nucleotide pyrophosphatase-5 as an oligomannosidic glycoprotein in rat brain. Ohe Y, etal., Biochem Biophys Res Commun 2003 Sep 5;308(4):719-25.
4. GOA pipeline RGD automated data pipeline
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
6. Comprehensive gene review and curation RGD comprehensive gene curation
Additional References at PubMed
PMID:12477932   PMID:15489334  


Genomics

Comparative Map Data
Enpp5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8924,407,574 - 24,415,029 (-)NCBIGRCr8
mRatBN7.2916,910,187 - 16,917,633 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl916,910,831 - 16,917,480 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx925,494,836 - 25,501,470 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0930,569,359 - 30,575,993 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0928,858,569 - 28,865,203 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0919,469,276 - 19,476,684 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl919,469,706 - 19,476,646 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0918,347,773 - 18,355,164 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4912,574,480 - 12,581,130 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1912,571,802 - 12,578,452 (-)NCBI
Celera914,637,055 - 14,643,705 (-)NCBICelera
Cytogenetic Map9q13NCBI
ENPP5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38646,159,185 - 46,170,980 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl646,159,185 - 46,170,980 (-)EnsemblGRCh38hg38GRCh38
GRCh37646,126,922 - 46,138,717 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36646,235,721 - 46,246,676 (-)NCBINCBI36Build 36hg18NCBI36
Build 34646,235,720 - 46,246,676NCBI
Celera647,680,299 - 47,691,261 (-)NCBICelera
Cytogenetic Map6p21.1NCBI
HuRef645,850,807 - 45,861,762 (-)NCBIHuRef
CHM1_1646,131,010 - 46,141,952 (-)NCBICHM1_1
T2T-CHM13v2.0645,994,273 - 46,006,158 (-)NCBIT2T-CHM13v2.0
Enpp5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391744,389,693 - 44,397,458 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1744,389,704 - 44,397,458 (+)EnsemblGRCm39 Ensembl
GRCm381744,078,802 - 44,086,567 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1744,078,813 - 44,086,567 (+)EnsemblGRCm38mm10GRCm38
MGSCv371744,215,795 - 44,223,516 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361743,541,924 - 43,549,614 (+)NCBIMGSCv36mm8
Celera1747,500,370 - 47,508,072 (+)NCBICelera
Cytogenetic Map17B3NCBI
cM Map1720.3NCBI
Enpp5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543711,195,391 - 11,204,728 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495543711,195,846 - 11,204,000 (-)NCBIChiLan1.0ChiLan1.0
ENPP5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2560,642,891 - 60,664,298 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1656,508,953 - 56,530,294 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0645,735,167 - 45,751,671 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1647,013,701 - 47,025,523 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl647,013,699 - 47,025,523 (-)Ensemblpanpan1.1panPan2
ENPP5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11214,376,278 - 14,387,883 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1214,377,565 - 14,385,171 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1214,408,235 - 14,419,802 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01214,876,522 - 14,888,437 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1214,877,806 - 14,888,470 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11214,392,730 - 14,404,121 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01214,480,941 - 14,492,536 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01214,577,456 - 14,589,058 (-)NCBIUU_Cfam_GSD_1.0
Enpp5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494649,781,793 - 49,790,968 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647614,169,148 - 14,179,151 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647614,169,298 - 14,178,930 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ENPP5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl740,920,031 - 40,933,326 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1740,920,030 - 40,936,380 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2747,233,579 - 47,249,978 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ENPP5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11726,082,427 - 26,091,526 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1726,082,451 - 26,092,900 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604446,165,201 - 46,175,504 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Enpp5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475414,286,371 - 14,295,501 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475414,286,337 - 14,294,529 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Enpp5
34 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:175
Count of miRNA genes:138
Interacting mature miRNAs:153
Transcripts:ENSRNOT00000013703
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
70226Eae4Experimental allergic encephalomyelitis QTL 4nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)9125661317Rat
9589055Scfw5Subcutaneous fat weight QTL 55.550.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)9137999212Rat
7411592Foco8Food consumption QTL 87.40.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)9137999212Rat
9589158Gluco65Glucose level QTL 656.820.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)9137999212Rat
1300124Cm4Cardiac mass QTL 43.55heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)9140594091Rat
1298088Edpm11Estrogen-dependent pituitary mass QTL 112.5pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)9143718459Rat
1641911Alcrsp13Alcohol response QTL 13response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)9143718459Rat
10054125Srcrt7Stress Responsive Cort QTL 73.330.0011blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)9187073594Rat
1331757Cdexp1CD45RC expression in CD8 T cells QTL 14.3CD8-positive T cell quantity (VT:0008077)blood CD45RC(high) CD8 T cell count to CD45RC(low) CD8 T cell count ratio (CMO:0001990)9102453767509080Rat
1354650Despr5Despair related QTL 54.010.0017locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)9125408446254084Rat
2303559Gluco54Glucose level QTL 542blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)9125408446254084Rat
61425Cia15Collagen induced arthritis QTL 154.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)9510982642921101Rat
631211Bw4Body weight QTL45.31retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)9510982650109826Rat
11353947Bp392Blood pressure QTL 392arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)9728325252283252Rat
61450Ciaa3CIA Autoantibody QTL 36.5blood autoantibody amount (VT:0003725)calculated serum anti-type 2 collagen antibody titer (CMO:0001279)9795472022071169Rat
9589133Insul26Insulin level QTL 2617.960.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)9895256053952560Rat
7411609Foco16Food consumption QTL 1625.60.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)9895256053952560Rat
1600365Mcs20Mammary carcinoma susceptibility QTL 203mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)91353377042791750Rat


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 24 31 19 12 19 68 33 33 11
Low 19 26 22 7 22 8 11 6 2 8 8
Below cutoff

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000013703   ⟹   ENSRNOP00000013703
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl916,910,831 - 16,917,480 (-)Ensembl
Rnor_6.0 Ensembl919,469,706 - 19,476,646 (-)Ensembl
RefSeq Acc Id: NM_001012744   ⟹   NP_001012762
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8924,408,217 - 24,414,867 (-)NCBI
mRatBN7.2916,910,830 - 16,917,480 (-)NCBI
Rnor_6.0919,469,915 - 19,476,565 (-)NCBI
Rnor_5.0918,347,773 - 18,355,164 (-)NCBI
RGSC_v3.4912,574,480 - 12,581,130 (-)RGD
Celera914,637,055 - 14,643,705 (-)RGD
Sequence:
RefSeq Acc Id: XM_006244607   ⟹   XP_006244669
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8924,407,574 - 24,415,029 (-)NCBI
mRatBN7.2916,910,187 - 16,917,633 (-)NCBI
Rnor_6.0919,469,276 - 19,476,684 (-)NCBI
Rnor_5.0918,347,773 - 18,355,164 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_001012762   ⟸   NM_001012744
- Peptide Label: precursor
- UniProtKB: Q5EAN9 (UniProtKB/Swiss-Prot),   P84039 (UniProtKB/Swiss-Prot),   A6JJ21 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006244669   ⟸   XM_006244607
- Peptide Label: isoform X1
- UniProtKB: Q5EAN9 (UniProtKB/Swiss-Prot),   P84039 (UniProtKB/Swiss-Prot),   A6JJ21 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000013703   ⟸   ENSRNOT00000013703

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P84039-F1-model_v2 AlphaFold P84039 1-477 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13696552
Promoter ID:EPDNEW_R7075
Type:multiple initiation site
Name:Enpp5_1
Description:ectonucleotide pyrophosphatase/phosphodiesterase 5
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0919,476,618 - 19,476,678EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1359199 AgrOrtholog
BioCyc Gene G2FUF-28123 BioCyc
Ensembl Genes ENSRNOG00000010232 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
  ENSRNOG00055019889 UniProtKB/Swiss-Prot
  ENSRNOG00060020899 UniProtKB/Swiss-Prot
  ENSRNOG00065024073 UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000013703 ENTREZGENE
  ENSRNOT00000013703.7 UniProtKB/Swiss-Prot
  ENSRNOT00055033980 UniProtKB/Swiss-Prot
  ENSRNOT00060036170 UniProtKB/Swiss-Prot
  ENSRNOT00065041290 UniProtKB/Swiss-Prot
Gene3D-CATH 3.30.1360.180 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.40.720.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7300780 IMAGE-MGC_LOAD
InterPro Alkaline_phosphatase_core_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Phosphodiest/P_Trfase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:316249 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGC_CLONE MGC:105517 IMAGE-MGC_LOAD
NCBI Gene 316249 ENTREZGENE
PANTHER ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE FAMILY MEMBER 5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Phosphodiest UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB ENPP5 RGD
PhenoGen Enpp5 PhenoGen
RatGTEx ENSRNOG00000010232 RatGTEx
  ENSRNOG00055019889 RatGTEx
  ENSRNOG00060020899 RatGTEx
  ENSRNOG00065024073 RatGTEx
Superfamily-SCOP Alkaline phosphatase-like UniProtKB/TrEMBL, UniProtKB/Swiss-Prot
UniProt A6JJ21 ENTREZGENE, UniProtKB/TrEMBL
  ENPP5_RAT UniProtKB/Swiss-Prot, ENTREZGENE
  Q5EAN9 ENTREZGENE
UniProt Secondary Q5EAN9 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-04-16 Enpp5  ectonucleotide pyrophosphatase/phosphodiesterase family member 5  Enpp5  ectonucleotide pyrophosphatase/phosphodiesterase 5  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-30 Enpp5  ectonucleotide pyrophosphatase/phosphodiesterase 5      Symbol and Name status set to approved 1299863 APPROVED
2005-07-29 Enpp5  ectonucleotide pyrophosphatase/phosphodiesterase 5      Symbol and Name status set to provisional 70820 PROVISIONAL

RGD Curation Notes
Note Type Note Reference
gene_other despite similarities in sequence between the rat, mouse and human proteins, neither NPP activity nor lysophospholipase D activity could be detected in the immunoprecipitated rat protein 1359752