Advanced Search (OLGA)

Gene: Kcnv2 (potassium voltage-gated channel modifier subfamily V member 2) Rattus norvegicus

Subscribe to Updates

Analyze

Symbol:

Kcnv2

Name:

potassium voltage-gated channel modifier subfamily V member 2

RGD ID:

1309271

Description:

Predicted to enable potassium channel regulator activity. Predicted to be involved in action potential and potassium ion transmembrane transport. Predicted to be part of voltage-gated potassium channel complex. Predicted to be active in membrane. Human ortholog(s) of this gene implicated in retinal cone dystrophy 3B. Orthologous to human KCNV2 (potassium voltage-gated channel modifier subfamily V member 2); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; Cuprizon.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

LOC294065; potassium channel, subfamily V, member 2; potassium channel, voltage-gated modifier subfamily V, member 2; potassium voltage-gated channel subfamily V member 2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	234,409,067 - 234,485,894 (+)	NCBI		GRCr8
mRatBN7.2	1	224,999,552 - 225,014,062 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	224,999,552 - 225,014,062 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	233,405,911 - 233,420,387 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	240,336,034 - 240,350,509 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	233,156,760 - 233,171,236 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	245,396,880 - 245,475,011 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	245,396,989 - 245,416,531 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	252,646,135 - 252,663,285 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	230,834,883 - 230,849,285 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	230,999,015 - 231,009,903 (+)	NCBI
Celera	1	222,175,534 - 222,189,894 (+)	NCBI		Celera
Cytogenetic Map	1	q52	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Kcnv2	Rat	chromosome 9p deletion syndrome		ISO	KCNV2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Chromosome 9p deletion syndrome	ClinVar	PMID:25741868
Kcnv2	Rat	cone dystrophy		ISO	KCNV2 (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:16909397 more ...
Kcnv2	Rat	cone-rod dystrophy 14		ISO	KCNV2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Cone dystrophy 3	ClinVar	PMID:23885164 more ...
Kcnv2	Rat	cone-rod dystrophy 6		ISO	KCNV2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Cone-rod dystrophy 6	ClinVar	PMID:25741868
Kcnv2	Rat	fundus dystrophy		ISO	KCNV2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Retinal dystrophy	ClinVar	PMID:16909397 more ...
Kcnv2	Rat	genetic disease		ISO	KCNV2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Inborn genetic diseases	ClinVar	PMID:25741868 more ...
Kcnv2	Rat	Nervous System Malformations		ISO	KCNV2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Abnormality of the nervous system	ClinVar	PMID:17896311 more ...
Kcnv2	Rat	optic atrophy		ISO	KCNV2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Optic atrophy	ClinVar	PMID:25741868 and PMID:28492532
Kcnv2	Rat	pathologic nystagmus		ISO	KCNV2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Nystagmus	ClinVar	PMID:17896311 more ...
Kcnv2	Rat	retinal cone dystrophy 3B		ISO	KCNV2 (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:16909397 more ...
Kcnv2	Rat	Stargardt disease		ISO	KCNV2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Stargardt disease	ClinVar	PMID:18235024 more ...
Kcnv2	Rat	Stargardt Disease 1		ISO	KCNV2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Fundus flavimaculatus	ClinVar	PMID:18235024 more ...

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Kcnv2	Rat	retinal cone dystrophy 3B		ISO	KCNV2 (Homo sapiens)	11554173	CTD Direct Evidence: marker/mechanism	CTD

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Kcnv2	Rat	retinal cone dystrophy 3B		ISO	KCNV2 (Homo sapiens)	7240710		OMIM

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Kcnv2	Rat	1,1,1-trichloroethane	decreases expression	ISO	Kcnv2 (Mus musculus)	6480464	1 more ...	CTD	PMID:25270620
Kcnv2	Rat	1,2-dichloroethane	decreases expression	ISO	Kcnv2 (Mus musculus)	6480464	ethylene dichloride results in decreased expression of KCNV2 mRNA	CTD	PMID:28960355
Kcnv2	Rat	2,3,7,8-tetrachlorodibenzodioxine	affects expression	ISO	Kcnv2 (Mus musculus)	6480464	Tetrachlorodibenzodioxin affects the expression of KCNV2 mRNA	CTD	PMID:26377647
Kcnv2	Rat	2,3,7,8-tetrachlorodibenzodioxine	decreases expression	EXP		6480464	Tetrachlorodibenzodioxin results in decreased expression of KCNV2 mRNA	CTD	PMID:33387578
Kcnv2	Rat	aristolochic acid A	increases expression	ISO	KCNV2 (Homo sapiens)	6480464	aristolochic acid I results in increased expression of KCNV2 mRNA	CTD	PMID:33212167
Kcnv2	Rat	arsenous acid	decreases expression	ISO	Kcnv2 (Mus musculus)	6480464	Arsenic Trioxide results in decreased expression of KCNV2 mRNA	CTD	PMID:35676786
Kcnv2	Rat	atrazine	increases expression	ISO	KCNV2 (Homo sapiens)	6480464	Atrazine results in increased expression of KCNV2 mRNA	CTD	PMID:22378314
Kcnv2	Rat	benzo[a]pyrene	increases expression	ISO	Kcnv2 (Mus musculus)	6480464	Benzo(a)pyrene results in increased expression of KCNV2 mRNA	CTD	PMID:19770486
Kcnv2	Rat	benzo[a]pyrene	decreases methylation	ISO	KCNV2 (Homo sapiens)	6480464	Benzo(a)pyrene results in decreased methylation of KCNV2 promoter	CTD	PMID:27901495
Kcnv2	Rat	benzo[a]pyrene	decreases expression	ISO	Kcnv2 (Mus musculus)	6480464	Benzo(a)pyrene results in decreased expression of KCNV2 mRNA	CTD	PMID:21715664 and PMID:22228805
Kcnv2	Rat	bisphenol A	decreases expression	EXP		6480464	bisphenol A results in decreased expression of KCNV2 mRNA	CTD	PMID:25181051 more ...
Kcnv2	Rat	bisphenol A	multiple interactions	EXP		6480464	[bisphenol A co-treated with Butter] affects the expression of KCNV2 mRNA and [bisphenol A co-treated with Butter] affects the methylation of KCNV2 promoter	CTD	PMID:28487351
Kcnv2	Rat	choline	multiple interactions	ISO	Kcnv2 (Mus musculus)	6480464	[Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in decreased methylation of KCNV2 gene	CTD	PMID:20938992
Kcnv2	Rat	Cuprizon	decreases expression	EXP		6480464	Cuprizone results in decreased expression of KCNV2 mRNA	CTD	PMID:26577399 and PMID:27523638
Kcnv2	Rat	cypermethrin	decreases expression	ISO	KCNV2 (Homo sapiens)	6480464	cypermethrin results in decreased expression of KCNV2 protein	CTD	PMID:36063984
Kcnv2	Rat	diarsenic trioxide	decreases expression	ISO	Kcnv2 (Mus musculus)	6480464	Arsenic Trioxide results in decreased expression of KCNV2 mRNA	CTD	PMID:35676786
Kcnv2	Rat	endosulfan	decreases expression	EXP		6480464	Endosulfan results in decreased expression of KCNV2 mRNA	CTD	PMID:29391264
Kcnv2	Rat	epoxiconazole	decreases expression	ISO	Kcnv2 (Mus musculus)	6480464	epoxiconazole results in decreased expression of KCNV2 mRNA	CTD	PMID:35436446
Kcnv2	Rat	fenvalerate	increases expression	EXP		6480464	fenvalerate results in increased expression of KCNV2 mRNA	CTD	PMID:30307764
Kcnv2	Rat	folic acid	multiple interactions	ISO	Kcnv2 (Mus musculus)	6480464	[Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in decreased methylation of KCNV2 gene	CTD	PMID:20938992
Kcnv2	Rat	L-methionine	multiple interactions	ISO	Kcnv2 (Mus musculus)	6480464	[Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in decreased methylation of KCNV2 gene	CTD	PMID:20938992
Kcnv2	Rat	perfluorohexanesulfonic acid	increases expression	ISO	Kcnv2 (Mus musculus)	6480464	perfluorohexanesulfonic acid results in increased expression of KCNV2 mRNA	CTD	PMID:37995155
Kcnv2	Rat	resveratrol	multiple interactions	ISO	KCNV2 (Homo sapiens)	6480464	[Plant Extracts co-treated with Resveratrol] results in decreased expression of KCNV2 mRNA	CTD	PMID:23557933
Kcnv2	Rat	sodium arsenite	decreases expression	ISO	KCNV2 (Homo sapiens)	6480464	sodium arsenite results in decreased expression of KCNV2 mRNA	CTD	PMID:38568856
Kcnv2	Rat	sodium arsenite	increases expression	ISO	Kcnv2 (Mus musculus)	6480464	sodium arsenite results in increased expression of KCNV2 mRNA	CTD	PMID:37682722
Kcnv2	Rat	tanespimycin	multiple interactions	ISO	KCNV2 (Homo sapiens)	6480464	[tanespimycin co-treated with VER 155008] results in decreased expression of KCNV2 protein	CTD	PMID:31370342
Kcnv2	Rat	tanespimycin	decreases expression	ISO	KCNV2 (Homo sapiens)	6480464	tanespimycin analog results in decreased expression of KCNV2 protein	CTD	PMID:31370342
Kcnv2	Rat	trichloroethene	decreases expression	EXP		6480464	Trichloroethylene results in decreased expression of KCNV2 mRNA	CTD	PMID:33387578
Kcnv2	Rat	valproic acid	increases methylation	ISO	KCNV2 (Homo sapiens)	6480464	Valproic Acid results in increased methylation of KCNV2 gene	CTD	PMID:29154799

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Kcnv2	Rat	action potential	involved_in	IBA	FB:FBgn0003380 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Kcnv2	Rat	monoatomic ion transmembrane transport	involved_in	IEA	UniProtKB-KW:KW-0407 and UniProtKB-KW:KW-0851	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Kcnv2	Rat	monoatomic ion transport	involved_in	IEA	UniProtKB-KW:KW-0406	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Kcnv2	Rat	monoatomic ion transport	involved_in	IEA	InterPro:IPR005821	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Kcnv2	Rat	potassium ion transmembrane transport	involved_in	IBA	MGI:102663 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Kcnv2	Rat	potassium ion transmembrane transport	involved_in	IEA	UniProtKB-KW:KW-0631	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Kcnv2	Rat	potassium ion transport	involved_in	IEA	UniProtKB-KW:KW-0633	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Kcnv2	Rat	potassium ion transport	involved_in	IEA	InterPro:IPR003968 more ...	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Kcnv2	Rat	protein homooligomerization	involved_in	IEA	InterPro:IPR003131	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Kcnv2	Rat	transmembrane transport	involved_in	IEA	InterPro:IPR005821	1600115	GO_REF:0000002	InterPro	GO_REF:0000002

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Kcnv2	Rat	membrane	located_in	IEA	UniProtKB-SubCell:SL-0162	1600115	GO_REF:0000044	UniProt	GO_REF:0000044
Kcnv2	Rat	membrane	located_in	IEA	UniProtKB-KW:KW-0472	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Kcnv2	Rat	membrane	located_in	IEA	InterPro:IPR005821	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Kcnv2	Rat	membrane	is_active_in	IBA	FB:FBgn0003380 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Kcnv2	Rat	monoatomic ion channel complex	part_of	IEA	UniProtKB-KW:KW-0851	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Kcnv2	Rat	voltage-gated potassium channel complex	part_of	IBA	FB:FBgn0003380 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Kcnv2	Rat	voltage-gated potassium channel complex	part_of	IEA	InterPro:IPR003968 more ...	1600115	GO_REF:0000002	InterPro	GO_REF:0000002

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Kcnv2	Rat	monoatomic ion channel activity	enables	IEA	InterPro:IPR005821	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Kcnv2	Rat	potassium channel activity	enables	IEA	UniProtKB-KW:KW-0631	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Kcnv2	Rat	potassium channel regulator activity	enables	IBA	MGI:1197011 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Kcnv2	Rat	protein binding	enables	ISO	KCNV2 (Homo sapiens)	1624291	UniProtKB:O15084 more ...	RGD	PMID:32296183 and PMID:34535971
Kcnv2	Rat	voltage-gated potassium channel activity	enables	IEA	InterPro:IPR003968 more ...	1600115	GO_REF:0000002	InterPro	GO_REF:0000002

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

PMID:22969075

Kcnv2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	234,409,067 - 234,485,894 (+)	NCBI		GRCr8
mRatBN7.2	1	224,999,552 - 225,014,062 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	224,999,552 - 225,014,062 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	233,405,911 - 233,420,387 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	240,336,034 - 240,350,509 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	233,156,760 - 233,171,236 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	245,396,880 - 245,475,011 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	245,396,989 - 245,416,531 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	252,646,135 - 252,663,285 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	230,834,883 - 230,849,285 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	230,999,015 - 231,009,903 (+)	NCBI
Celera	1	222,175,534 - 222,189,894 (+)	NCBI		Celera
Cytogenetic Map	1	q52	NCBI

KCNV2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	9	2,717,510 - 2,730,037 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	9	2,717,510 - 2,730,037 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	9	2,717,510 - 2,730,037 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	9	2,707,526 - 2,719,757 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	9	2,707,525 - 2,719,757	NCBI
Celera	9	2,635,779 - 2,648,010 (+)	NCBI		Celera
Cytogenetic Map	9	p24.2	NCBI
HuRef	9	2,672,590 - 2,685,127 (+)	NCBI		HuRef
CHM1_1	9	2,717,855 - 2,730,366 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	9	2,720,267 - 2,732,772 (+)	NCBI		T2T-CHM13v2.0

Kcnv2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	19	27,299,461 - 27,314,579 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	19	27,299,988 - 27,314,579 (+)	Ensembl		GRCm39 Ensembl
GRCm38	19	27,322,061 - 27,337,179 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	19	27,322,588 - 27,337,179 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	19	27,397,109 - 27,411,669 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	19	27,389,716 - 27,404,276 (+)	NCBI		MGSCv36	mm8
Celera	19	28,106,770 - 28,121,318 (+)	NCBI		Celera
Cytogenetic Map	19	C1	NCBI
cM Map	19	21.88	NCBI

Kcnv2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955434	7,122,287 - 7,133,737 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955434	7,122,287 - 7,133,737 (+)	NCBI	ChiLan1.0	ChiLan1.0

KCNV2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	11	121,843,367 - 121,868,053 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	9	121,858,914 - 121,873,997 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	9	2,523,388 - 2,537,945 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	9	2,717,407 - 2,729,494 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	9	2,717,407 - 2,729,494 (+)	Ensembl	panpan1.1		panPan2

KCNV2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	91,338,401 - 91,350,537 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	91,338,401 - 91,349,967 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	91,806,312 - 91,818,452 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	91,883,006 - 91,895,160 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	91,883,006 - 91,894,914 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	91,530,260 - 91,542,405 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	91,242,294 - 91,254,438 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	92,017,037 - 92,029,184 (+)	NCBI		UU_Cfam_GSD_1.0

Kcnv2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	138,840,340 - 138,852,434 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936503	2,319,617 - 2,332,971 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936503	2,320,570 - 2,332,833 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

KCNV2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	219,100,447 - 219,112,905 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	219,099,858 - 219,113,194 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	244,922,598 - 244,935,768 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

KCNV2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	76,825,875 - 76,838,967 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	12	76,826,283 - 76,837,774 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	65,165,788 - 65,177,825 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Kcnv2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624736	7,407,367 - 7,418,577 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624736	7,405,697 - 7,419,364 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in Kcnv2
48 total Variants

Predicted Target Of

	Summary Value
Count of predictions:	1486
Count of miRNA genes:	357
Interacting mature miRNAs:	497
Transcripts:	ENSRNOT00000016757
Prediction methods:	Microtar, Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
8693637	Alc29	Alcohol consumption QTL 29	2.7	0.258	drinking behavior trait (VT:0001422)	calculated ethanol drink intake rate (CMO:0001615)	1	207987464	234238494	Rat
1578778	Pur4	Proteinuria QTL 4	3.3	0.003	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	1	150700247	252085048	Rat
1354646	Kidm18	Kidney mass QTL 18	5.7		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	1	151162512	256448636	Rat
1357335	Bw39	Body weight QTL 39	3.3		body mass (VT:0001259)	body weight (CMO:0000012)	1	197814409	242814409	Rat
2302375	Bw83	Body weight QTL 83	4.87	0.0002	body mass (VT:0001259)	body weight (CMO:0000012)	1	197697768	242697768	Rat
1354652	Kidm20	Kidney mass QTL 20	4.3		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	1	177227632	256448636	Rat
2293674	Bss39	Bone structure and strength QTL 39	7.1	0.0001	femur strength trait (VT:0010010)	femur total energy absorbed before break (CMO:0001677)	1	201554356	246554356	Rat
2302378	Insul11	Insulin level QTL 11	3.25		blood insulin amount (VT:0001560)	serum insulin level (CMO:0000358)	1	144267353	251128347	Rat
61455	Niddm7	Non-insulin dependent diabetes mellitus QTL 7	5.5		blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	1	214537555	238757011	Rat
61327	Eae7	Experimental allergic encephalomyelitis QTL 7	5.6		body mass (VT:0001259)	change in body weight (CMO:0002045)	1	216255568	260522016	Rat
1600392	Bw123	Body weight QTL 123		0.001	body mass (VT:0001259)	body weight (CMO:0000012)	1	223201027	260522016	Rat
7794788	Mcs32	Mammary carcinoma susceptibility QTL 32	2.61		mammary gland integrity trait (VT:0010552)	mammary tumor incidence/prevalence measurement (CMO:0000946)	1	115540693	238914717	Rat
1578763	Kidm29	Kidney mass QTL 29	3.3	0.0001	kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	1	179567751	260522016	Rat
1600395	Niddm69	Non-insulin dependent diabetes mellitus QTL 69	4.14	0.0002	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	1	195804352	257091168	Rat
1354624	Cm35	Cardiac mass QTL35	5.7		heart left ventricle mass (VT:0007031)	calculated heart weight (CMO:0000073)	1	177227632	256448636	Rat
1600396	Niddm68	Non-insulin dependent diabetes mellitus QTL 68	4.97	0.0003	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	1	195804352	257091168	Rat
1600397	Edcs4	Endometrial carcinoma susceptibility QTL 4	2.2		uterus morphology trait (VT:0001120)	percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)	1	206081677	251081677	Rat
631838	Niddm36	Non-insulin dependent diabetes mellitus QTL 36		0.01	insulin secretion trait (VT:0003564)	calculated pancreatic islet insulin release measurement (CMO:0001217)	1	184550676	229550676	Rat
8693661	Alc34	Alcohol consumption QTL 34	2.2	0.611	drinking behavior trait (VT:0001422)	calculated ethanol drink intake rate (CMO:0001615)	1	207987464	228627600	Rat
1549837	Hcar15	Hepatocarcinoma resistance QTL 15		0.05	liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	1	153136852	260522016	Rat
152025235	Bw194	Body weight QTL 194	4.86		body mass (VT:0001259)		1	123556856	242907031	Rat
1600388	Niddm67	Non-insulin dependent diabetes mellitus QTL 67	5.84	0.000004	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	1	195804352	257091168	Rat
2293694	Bss38	Bone structure and strength QTL 38	7.05	0.0001	femur strength trait (VT:0010010)	femur stiffness (CMO:0001674)	1	201554356	246554356	Rat
1578759	Uae30	Urinary albumin excretion QTL 30	3.3	0.003	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	1	150700247	252085048	Rat
8655655	Arrd2	Age-related retinal degeneration QTL 2	7.79		retinal layer morphology trait (VT:0003727)	percentage of study population developing retinopathy during a period of time (CMO:0002453)	1	183970203	243914901	Rat
734767	Niddm57	Non-insulin dependent diabetes mellitus QTL 57			body mass (VT:0001259)	body weight (CMO:0000012)	1	224054293	260122809	Rat
1358898	Bp255	Blood pressure QTL 255	3.6		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	191019702	246062233	Rat
631843	Bw116	Body weight QTL 116	4.1	0.016	abdominal adipose amount (VT:1000220)	abdominal fat pad weight (CMO:0000088)	1	224054293	260122809	Rat
2300175	Bmd40	Bone mineral density QTL 40	15.4	0.0001	femur mineral mass (VT:0010011)	bone mineral density (CMO:0001226)	1	201554356	246554356	Rat
731175	Uae20	Urinary albumin excretion QTL 20	3.5	0.0018	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	1	221264111	259647894	Rat
1354661	Bw33	Body weight QTL 33	5.2		body mass (VT:0001259)	body weight (CMO:0000012)	1	151162512	256448636	Rat
724538	Kidm1	Kidney mass QTL 1	3.2		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	1	213707201	252085212	Rat
1358886	Bp260	Blood pressure QTL 260	3.67		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	151162766	225824951	Rat
737977	Bp160	Blood pressure QTL 160		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	181133855	226133855	Rat
2293655	Bss36	Bone structure and strength QTL 36	10.66	0.0001	femur strength trait (VT:0010010)	femur ultimate force (CMO:0001675)	1	201554356	246554356	Rat
1298084	Thym4	Thymus enlargement QTL 4	10.68		thymus mass (VT:0004954)	thymus weight to body weight ratio (CMO:0000612)	1	197814409	242814409	Rat
724531	Uae5	Urinary albumin excretion QTL 5	4		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	1	150700142	252085212	Rat
8552891	Epfw5	Epididymal fat weight QTL 5	4.4		epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	1	193113876	238113876	Rat
734769	Niddm58	Non-insulin dependent diabetes mellitus QTL 58			body mass (VT:0001259)	body weight (CMO:0000012)	1	224569538	260122809	Rat
734768	Niddm59	Non-insulin dependent diabetes mellitus QTL 59			body mass (VT:0001259)	body weight (CMO:0000012)	1	213843987	258843987	Rat
1358890	Bp259	Blood pressure QTL 259	3.06		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	210702053	260522016	Rat
724533	Rf51	Renal function QTL 51	5.3	0.0002	kidney plasma flow trait (VT:0005524)	renal plasma flow (CMO:0001914)	1	218753816	256448513	Rat
1354580	Scort1	Serum corticosterone level QTL 1	3.4		blood corticosterone amount (VT:0005345)	blood corticosterone level (CMO:0001172)	1	156677124	256448636	Rat
1358292	Cm37	Cardiac mass QTL 37	6.2	8e-07	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	1	196248093	241248093	Rat
61376	Bp42	Blood pressure QTL 42	23.4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	197814409	242814409	Rat
634313	Niddm43	Non-insulin dependent diabetes mellitus QTL 43			blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	199050459	259647894	Rat
1549910	Bw54	Body weight QTL 54		0.05	body mass (VT:0001259)	body weight (CMO:0000012)	1	214647894	259647894	Rat
70211	Niddm24	Non-insulin dependent diabetes mellitus QTL 24	3.79		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	1	214647894	259647894	Rat
1357399	Bw45	Body weight QTL 45	3.05		body mass (VT:0001259)	body mass index (BMI) (CMO:0000105)	1	206329708	251329708	Rat
724552	Glom2	Glomerulus QTL 2	3.3	0.0001	kidney glomerulus morphology trait (VT:0005325)	count of superficial glomeruli directly contacting the kidney surface (CMO:0001001)	1	222363780	260522016	Rat
1357404	Bw42	Body weight QTL 42	4.49	0.0001	body mass (VT:0001259)	body weight (CMO:0000012)	1	206329708	251329708	Rat
10053715	Scort24	Serum corticosterone level QTL 24	2.13	0.0088	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	1	221414816	260522016	Rat
7421630	Bp362	Blood pressure QTL 362		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	118608292	241799120	Rat
1358916	Kidm22	Kidney mass QTL 22	3.32		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	1	210702053	240947965	Rat
2312564	Glom18	Glomerulus QTL 18	2.4	0.003	kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	1	185356336	231689108	Rat
634321	Hc1	Hypercalciuria QTL 1	2.91		urine calcium amount (VT:0002985)	urine calcium excretion rate (CMO:0000763)	1	178810256	240830002	Rat
61400	Niddm1	Non-insulin dependent diabetes mellitus QTL 1	11		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	218753689	245907899	Rat
1331790	Bp201	Blood pressure QTL 201	3.127		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	198211513	225126682	Rat
10059587	Bw173	Body weight QTL 173	3.23	0.025	body mass (VT:0001259)	body weight (CMO:0000012)	1	202069611	247069611	Rat
2292216	Bw80	Body weight QTL 80	3.23	0.0019	body mass (VT:0001259)	body weight (CMO:0000012)	1	213533809	243914901	Rat
1300168	Bp170	Blood pressure QTL 170	2.76		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	207702246	228581766	Rat
2292220	Bp306	Blood pressure QTL 306	3.47	0.00087	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	164310393	243914901	Rat
10059590	Kidm44	Kidney mass QTL 44	3.42	0.025	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	1	191033875	236033875	Rat
1641926	Teswt2	Testicular weight QTL 2	2.82		testis mass (VT:1000644)	both testes wet weight (CMO:0000175)	1	197697768	238755659	Rat
631658	Cm7	Cardiac mass QTL 7	5.32	0.0001	aorta mass (VT:0002845)	aorta weight (CMO:0000076)	1	196248093	241248093	Rat
1354610	Bw34	Body weight QTL 34	4.1		body mass (VT:0001259)	body weight (CMO:0000012)	1	151162512	256448636	Rat
2293700	Bmd27	Bone mineral density QTL 27	6.6	0.0001	femur mineral mass (VT:0010011)	trabecular volumetric bone mineral density (CMO:0001729)	1	224054293	243747962	Rat
2293701	Bmd34	Bone mineral density QTL 34	8.3	0.0001	femur strength trait (VT:0010010)	femoral neck ultimate force (CMO:0001703)	1	224054293	243747962	Rat
7387289	Uae45	Urinary albumin excretion QTL 45	2.86	0.0021	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	1	223262787	260522016	Rat
8655855	Arrd3	Age-related retinal degeneration QTL 3	3.07		lens clarity trait (VT:0001304)	cataract incidence/prevalence measurement (CMO:0001585)	1	183970203	243914901	Rat
634340	Hcar5	Hepatocarcinoma resistance QTL 5	8		liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	1	214537555	226660468	Rat
1600374	Mcs17	Mammary carcinoma susceptibility QTL 17	3		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	1	197670404	242670404	Rat
1600363	Hc6	Hypercalciuria QTL 6	2.7		urine calcium amount (VT:0002985)	urine calcium excretion rate (CMO:0000763)	1	203995416	244113296	Rat
8693618	Alc25	Alcohol consumption QTL 25	3	0.28	drinking behavior trait (VT:0001422)	calculated ethanol drink intake rate (CMO:0001615)	1	207987464	228627600	Rat
738032	Hcas5	Hepatocarcinoma susceptibility QTL 5	3.12		liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	1	176426412	257976495	Rat
1358191	Ept10	Estrogen-induced pituitary tumorigenesis QTL 10	3.8		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	1	192825253	243914732	Rat
2302040	Pia35	Pristane induced arthritis QTL 35	3.8	0.001	blood immunoglobulin amount (VT:0002460)	serum immunoglobulin G1 level (CMO:0002115)	1	216255568	260522016	Rat
7394701	Uae46	Urinary albumin excretion QTL 46	3.6	0.0056	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	1	201554356	246554356	Rat
1598821	Rf55	Renal function QTL 55	6.3		renal blood flow trait (VT:2000006)	ratio of change in renal blood flow to change in renal perfusion pressure (CMO:0001239)	1	218748008	257976495	Rat

BE096685

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	225,013,066 - 225,013,274 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	245,415,536 - 245,415,743	NCBI	Rnor6.0
Rnor_5.0	1	252,662,290 - 252,662,497	UniSTS	Rnor5.0
RGSC_v3.4	1	230,848,290 - 230,848,497	UniSTS	RGSC3.4
Celera	1	222,188,899 - 222,189,106	UniSTS
RH 3.4 Map	1	1606.6	UniSTS
Cytogenetic Map	1	q51	UniSTS

RH137408

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	225,013,851 - 225,014,056 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	245,416,321 - 245,416,525	NCBI	Rnor6.0
Rnor_5.0	1	252,663,075 - 252,663,279	UniSTS	Rnor5.0
RGSC_v3.4	1	230,849,075 - 230,849,279	UniSTS	RGSC3.4
Celera	1	222,189,684 - 222,189,888	UniSTS
RH 3.4 Map	1	1609.1	UniSTS
Cytogenetic Map	1	q51	UniSTS

RH138582

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	225,013,448 - 225,013,588 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	245,415,918 - 245,416,057	NCBI	Rnor6.0
Rnor_5.0	1	252,662,672 - 252,662,811	UniSTS	Rnor5.0
RGSC_v3.4	1	230,848,672 - 230,848,811	UniSTS	RGSC3.4
Celera	1	222,189,281 - 222,189,420	UniSTS
RH 3.4 Map	1	1611.5	UniSTS
Cytogenetic Map	1	q51	UniSTS

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
8	9	49	80	64	64	35	21	35	6	173	90	61	32	58	29


RefSeq Transcripts	NM_001106370	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589047	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063287357	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473953	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000016757 ⟹ ENSRNOP00000016757

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	1	224,999,552 - 225,014,062 (+)	Ensembl
Rnor_6.0 Ensembl	1	245,396,989 - 245,416,531 (+)	Ensembl

RefSeq Acc Id:

NM_001106370 ⟹ NP_001099840

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	234,413,174 - 234,427,684 (+)	NCBI
mRatBN7.2	1	224,999,552 - 225,014,062 (+)	NCBI
Rnor_6.0	1	245,396,989 - 245,416,531 (+)	NCBI
Rnor_5.0	1	252,646,135 - 252,663,285 (+)	NCBI
RGSC_v3.4	1	230,834,883 - 230,849,285 (+)	RGD
Celera	1	222,175,534 - 222,189,894 (+)	RGD

Sequence:

show sequence

AGAAAGAGCAGCTTTGAGAGTAATGCCTGGGGCCCCAGTCTGCTGGTCTCTCTAAAACAGTACAGGGCAGTGAACGCTAGAGACAGGCAAGGGGTCTGACTCCGAACGCCATGCTGAAACAGAGCACC
GAGAGGAGATGGTCCTTGAGCTACAAGCTCTGGAATACCTCAGAGACTGAGGATGTGCCCAACACTGGAAGCAACCAACACCGTAAGAGCATCTGCTCCATGGGAGCCCGCACTGGCTCTCAGGCCAG
CATCGCACCACAGTGGACCGAGGGCAACTACAATTACTACATCGAGGAAGATGAGGACTGCGGGGAGGAGGAGGATTGGAAGGATGATCTTGCTGAAGAGAACCAGAAGCCCGAGGGCCCCCCAGCTC
CACTGGATGGCCACACTGACACTCCAACCCAGCTGTCTACGCTAAAAGTAAACGTAGGCGGCCACAGCTATCAGCTGGAATGCTGTGAGCTGGCCAACTACCCCAAAACGCGCCTGGGTCGCCTGGTC
ACCTCCACCAGCCGCAACTGCCAGCTGGGCCTGTGCGATGACTACGAGGCAAAGACTGACGAGTACTTCTTTGACCGTGACCCGGCGGTCTTCCAGCTCATCTACAACTTCTACACATCAGGGGTGTT
GCTGGTGCGAGACGAGCTGTGTCCACGAAGCTTCCTGGAGGAGCTGGGCTACTGGGGCGTGAGGCTCAAGTACACGCCACGCTGCTGTCGCATCTGCTTCGAGGAGCGGAGGGACGAACTGAGCGAGC
AACTGAAGATCCAAAGGGAGCTGCGTGCGCAGGCGCAGGCCGAGGAGGCCGAGGAACTCTTTCGGGACATGCGCTTCTATGGACCACAGCGTCAGCGCCTCTGGAACCTTATGGAGAAGCCCTTCTCT
TCCGTAGCCGCCAAGGCCATGGGGGTGGCCTCCAATCTCTTCGTCCTCATCTCCGTAGTGGCCCTGGCGCTCAACACGGTGGAGGAGATGCAGCACCAGGCGGAGCAGGGCACAGGTGGTGGGGACCC
CAGGCCCATATTGGAGCACGTGGAGATGCTGTGCGTGGCTTTCTTCACTCTGGAGTTCCTGCTGCGCCTCGCCTCCACCCCCAACCTGCGGCGCTTTGCACGCAGCGCCCTCAACCTGGTGGACCTGG
TGGCCATTCTGCCTTTCTACCTGCAGCTGCTGCTGGAGTGCTTCACGAGCGAGGACCAGAGGCATGGCAAGGGCTCCCCACGGGAACACGACCTGGAGACCGTGGGCCGTGTGGGCAAGGTGGGCCAG
GTCCTGCGCATCATGCGCCTCATGCGCATCTTCCGCATCCTCAAGCTAGCCCGCCACTCCACAGGTTTGCGGGCCTTCGGCTTCACGCTGCGCCAGTGCTACCAGCAGGTTGGCTGCCTGATGCTCTT
CATCACTATGGGCATCTTTTCCTTCTCTGCAGCGGTCTACTCGGTGGAGCACGACGTGCCTGGTACCAACTTCACCAGCATCCTCCATGCCTGGTGGTGGGCTGCGGTAAGCATCTCTACCGTGGGCT
ATGGAGACATGTATCCAGAGACCCACCTGGGCAGGCTTTTTGCCTTCCTCTGCATCGCTTTTGGGATTATTCTCAACGGGATGCCCATTTCCATCCTCTACAACAAGTTCTCCGATTACTACAGCAAG
CTCAAAGCTTACGAGTACACCGCCATCCGTAGGGAACGGGGAAAAGTGAACTTTATGCAGAGAGCCACGAAGAAAATGGCTGAATGTTTATCTGGAAGTAATGCACAGTCCGCCACAAGGCAAGAGAA
TTAAGGCTTCATTAGGACACAAGGCTTATAGAACCCATGAATTTCAAAGCTTCGTTGCTTCTTTTAAAATTATGCCCCCCCCCGCCCCTGGCAACAGAGGGGCGTGTGAAGCCCACGCAGACAAAGAG
CATTCAGTTCAAAGTTCTAACTCTAAAAATGCTCATTTGGGCCCAAATTCAAAACTCCTCACATGGCCCTTTAGCTAGATTGTGTTTATGTATGACGTCAGTCCTGGAAACGGCTGCAAGGAAGCAAC
ATCTTAGATTTCTCTTTTAGTTTCTCATGGCATCAAGCTTGATGCATATATTTAGACATGAATTGACTAGAGATGATTTTTCCTAGTTCAAAGCAGGAGGAGGGGCCCTTAATTTTCCAGAGAATGGA
GCGTCTCAGCAGGAGCAGGAGAAACTTTGGAATCAGACCAACCTCTCAGCCAGAATCCCAGATCTACCAGCTGGATGGTTTGTAAGGAACCTACTTCAACCCTCTGAGCCTTGGTCTCTTCAACTGTG
AGATGTAGAATGAGTTTTGATGATTTGAAGGATGAGTTTTGGGTTTGAAGATAAGTGCTGTGTACATGATAGCTGTTCAAAGTGTCTGAGTGAGTAACATCTGATATATCATTCTCAGTGGTTTACAA
CCAGAGGCAAGTCTTCTCCCCAGGCCACATTTGGAGATGTTTTTGATCATCACTATAGTTAAAAAGGATGAGGCGGGTTCCTAGCATCTAGTAGATTAGGGAGGCATGGGGTGCTACAGATCCCTACA
GTATACAATAGTGTCTGCCCTACAAATTACTAGATGTCAGTAATGCCAATGTTGAGGAATGTCTAGAATTACTATGGGAACCCAAACTTGGTCCATGACATTTTTCTGTATGTATGAATTTCTCTCTC
CCTTGAAAGGAGCCCCCAAGTGACCTCTCTCTTAATGCAGACTTCCGTTCTTTCTGTTTCCCAGAGAAGGGGTGGGAGAGCAGTGCTGCCTCCCCAACAATGGCTGTAAGGCAAGCGCTGGAAGACCT
CTCTAGGCTGAGGGTTGGAAACCAGTGCCCTTTGGGTCATTTCTCTTCTTGAGATCTTTCTTTTAATTCCTTTCTGAGTCCACAGGGCTCCTGTAAATTGAAGTCTTAAAATCAAAGGCTCATTTGAA
CAGAGCACACAGAGATTTGCCCCCTAGAACTGGAGTTCGTGGTGCTATAGAATCCTTCTCAGGGTATGACTGCCCCATCTGAATCATATGTAAGAATAATTGTGCTACTGACAGAGGCAAATGTTAGT
GACTATACATCTAGTCTTTAACTTCATTTAACCCTCAGTACATCCTTAAGTTAGATGCTCTGGTTCTATTTAAGGAGAAATGGAGACTTAGAGAGGTTAAATGGTCCATCCACACTCTCCTAGCCACT
AAAATAGTGGCTTTAAGCATAGGTTCATCTGAGGGAGGCACAAGGCTCTGTTGGAAGTCTAAACGTGTGACTTTCATACATCGGCATCAGTGCCGGTTAGTTCCCATCGTCAGCTTGATACAATCTAG
AGTCACCTGGGAAGTGGGAACCTCAGTTGAGAGATTGCTCTGACCAAAGTGGTCTGTGACCATGGCTGTGTCTGTGAATAGTTATCTTGACTGATGATTACAAGAAATTTTGGCTTGATAAGTAAGCA
CTAACACTTAGAGATGATTATTGTTATGCCAAGCCCACTGTGGGTGACATCATCCCTAGCAAGTAAGCCTAGGCTATATAAGAAGGCTAGATGAATGTGAGCCAGGGAGCAGGCCAGAGAGTGAGCCA
TCAAGCATCATTCCTCCAAGGTTTCTGATTCAAGCTCTTGCCCTGATTTCTCTTAGTGATGAATTTCAACCTAGAAAAGTAAGATGAAATATACCCTTTCCTCCCCAAGTTGCTTTTGGTCATGGTGT
TTCACAGCAACAACAAATCAAAAGAGTGTCTTACTCTGTTTTGCGGGGCTGTTACAGAATACTGTGGATTGAGCAACATATAGTACTTATTTCCCTCAGCTCAGTTAGAACTCCAAGAACAAGACACA
GGCCGGTTGGGTTATATGTTCAAGCTGCTCTCTTCAGTCAAGTTGGTGTCTTCTTGGTGCATTCTACAGAGGAGACTGTGTCCTAAAAGCATAAGGCGAGCTTCCTGAACACTGCCTCCAAGTATCTT
ATAAGGGCCGTGATACCATAACTCATGAAGGAACAGCCTCATAGCTTAATCAGCCCTAAACACTTCAGCTCTTAATATGCCATTGTGACAGCACACCTGACTTACAGAGGGACCTATTCAAGCCAAAA
CATAGGGTCAACTTGAATTTTAGATGAGCAGCAATTTGTAATAGAAATATATCTCAAATATTGCATAGTATAGGCTTCTAAAATTCAAATTTAACTACAAGTCTGGCATTTTGCTTGCTAAATCTGAT
AATCCTGTACTGTTGTTTTTCAGTGTCAAGTTTTCTTCATTTAGTTAACCCCCAAGCCCTAAACAGCACACCCTTCAGCCAAGGGAGTCTTTTCTCTTGCCAGCTAAAAGGAGGGGGGATTTTTGAAC
GAGTCTCCTTGCCAGAAGTAATCACATGAACTCAGTCAGCTCACATATCCACACAACGCAATCAACAAGGCGGCCGCCCTGCTGTCCATCCCCAGCCCTGGAGCACTTCAAACTCCAGGAATGGATTT
GCTGATGAAGTGAAACTTCTGGGCTATCATGGGGACCGGGGAAGACCTAATGATCATAACACTCCTTCTGCTCTGAGAGAGCAGACCCAGAACTGCAAAGCAGAAGAAACTCCCTGAGAGACAGGATG
GGGGCACATGGGGTATGGGGGGAGGCACTGATAACAAATCTGGAACTTTCCAGGTTCCTGGGATGCGATCTAGTCAACAGCAAGAGGCCTCCTCCCAGTCTCACTGGCCACATCTGTTCAGACAGCTG
TGCACTGCCTCCCCCAGGGAGTAAGAATGTCAGGCAGAATACAATTAACACACACAAAAAGAACATTTTGTGAGCTTGTGTACCAGGCATAGGAACATTATTTAATTTAATACTTCAGTTGCGTTATC
AAGGTTTCCCTGGTCACTCACAAAGGCTTAATCACAATCAACCTACTCTTGATTTTAAAGCTGATTCTGCAATAGACTCCACTTAGTTGAACCATATGAAGCTGACGTTTTCATCAAACATGACTGAA
TATTGGCAGCTTCTTCTGGCATGACCTAAGAGTTATGTGGTTGTAATTTCTCTCAACTTGTTCCCACATTGTTAACATAGAAATAATAATGGTGTTTTCCTCACAATGTGGATGACTATTAAATGACA
TTGTGTATATTTAAAACTTTAGCATCCTGACACATGTTATGTATTAAATAAAGGCTGATCGTCCTCTTCCTCTTTCTCTTC

hide sequence

RefSeq Acc Id:

XM_063287357 ⟹ XP_063143427

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	234,409,067 - 234,485,894 (+)	NCBI


Protein RefSeqs	NP_001099840	(Get FASTA)	NCBI Sequence Viewer
	XP_063143427	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM13064	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000016757
	ENSRNOP00000016757.2

RefSeq Acc Id:

NP_001099840 ⟸ NM_001106370

- UniProtKB:

D3ZZR6 (UniProtKB/TrEMBL), A6I0T3 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MLKQSTERRWSLSYKLWNTSETEDVPNTGSNQHRKSICSMGARTGSQASIAPQWTEGNYNYYIEEDEDCGEEEDWKDDLAEENQKPEGPPAPLDGHTDTPTQLSTLKVNVGGHSYQLECCELANYPKT
RLGRLVTSTSRNCQLGLCDDYEAKTDEYFFDRDPAVFQLIYNFYTSGVLLVRDELCPRSFLEELGYWGVRLKYTPRCCRICFEERRDELSEQLKIQRELRAQAQAEEAEELFRDMRFYGPQRQRLWNL
MEKPFSSVAAKAMGVASNLFVLISVVALALNTVEEMQHQAEQGTGGGDPRPILEHVEMLCVAFFTLEFLLRLASTPNLRRFARSALNLVDLVAILPFYLQLLLECFTSEDQRHGKGSPREHDLETVGR
VGKVGQVLRIMRLMRIFRILKLARHSTGLRAFGFTLRQCYQQVGCLMLFITMGIFSFSAAVYSVEHDVPGTNFTSILHAWWWAAVSISTVGYGDMYPETHLGRLFAFLCIAFGIILNGMPISILYNKF
SDYYSKLKAYEYTAIRRERGKVNFMQRATKKMAECLSGSNAQSATRQEN

hide sequence

Ensembl Acc Id:

ENSRNOP00000016757 ⟸ ENSRNOT00000016757

RefSeq Acc Id:	XP_063143427 ⟸ XM_063287357
- Peptide Label:	isoform X1

Protein Domains

Ion transport Potassium channel tetramerisation-type BTB

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZZR6-F1-model_v2	AlphaFold	D3ZZR6	1-561	view protein structure

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Database	Acc Id	Source(s)
BioCyc Gene	G2FUF-56018	BioCyc
Ensembl Genes	ENSRNOG00000012566	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000016757	ENTREZGENE
	ENSRNOT00000016757.4	UniProtKB/TrEMBL
Gene3D-CATH	1.10.287.70	UniProtKB/TrEMBL
	1.20.120.350	UniProtKB/TrEMBL
	Potassium Channel Kv1.1, Chain A	UniProtKB/TrEMBL
InterPro	BTB/POZ_fold	UniProtKB/TrEMBL
	Ion_trans	UniProtKB/TrEMBL
	K_chnl_volt-dep_Kv	UniProtKB/TrEMBL
	K_chnl_volt-dep_Kv9	UniProtKB/TrEMBL
	K_chnl_volt-dep_Kv_tetra	UniProtKB/TrEMBL
	VG_K_chnl	UniProtKB/TrEMBL
	Volt_channel_dom_sf	UniProtKB/TrEMBL
KEGG Report	rno:294065	UniProtKB/TrEMBL
NCBI Gene	294065	ENTREZGENE
PANTHER	POTASSIUM VOLTAGE-GATED CHANNEL SUBFAMILY V MEMBER 2	UniProtKB/TrEMBL
	PTHR11537	UniProtKB/TrEMBL
Pfam	Ion_trans	UniProtKB/TrEMBL
	K_tetra	UniProtKB/TrEMBL
PhenoGen	Kcnv2	PhenoGen
PRINTS	KCHANNEL	UniProtKB/TrEMBL
	KV9CHANNEL	UniProtKB/TrEMBL
	KVCHANNEL	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000012566	RatGTEx
Superfamily-SCOP	BTB/POZ_fold	UniProtKB/TrEMBL
	Voltage-gated potassium channels	UniProtKB/TrEMBL
UniProt	A6I0T3	ENTREZGENE, UniProtKB/TrEMBL
	D3ZZR6	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-02-11	Kcnv2	potassium voltage-gated channel modifier subfamily V member 2	Kcnv2	potassium channel, voltage-gated modifier subfamily V, member 2	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2015-01-26	Kcnv2	potassium channel, voltage-gated modifier subfamily V, member 2	Kcnv2	potassium channel, subfamily V, member 2	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	Kcnv2	potassium channel, subfamily V, member 2	Kcnv2_predicted	potassium channel, subfamily V, member 2 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Kcnv2_predicted	potassium channel, subfamily V, member 2 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
		Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

Send us a Message

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM