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Gene: KCNV2 (potassium voltage-gated channel modifier subfamily V member 2) Pan paniscus

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Symbol:

KCNV2

Name:

potassium voltage-gated channel modifier subfamily V member 2

RGD ID:

11839235

Description:

ENCODES a protein that exhibits potassium channel activity (inferred); voltage-gated potassium channel activity (inferred); INVOLVED IN action potential (inferred); potassium ion transmembrane transport (inferred); potassium ion transport (inferred); ASSOCIATED WITH chromosome 9p deletion syndrome (ortholog); cone dystrophy (ortholog); cone-rod dystrophy 14 (ortholog); FOUND IN endomembrane system (inferred); membrane (inferred); monoatomic ion channel complex (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

potassium channel, subfamily V, member 2; potassium voltage-gated channel subfamily V member 2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	11	121,843,367 - 121,868,053 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	9	121,858,914 - 121,873,997 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	9	2,523,388 - 2,537,945 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	9	2,717,407 - 2,729,494 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	9	2,717,407 - 2,729,494 (+)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

chromosome 9p deletion syndrome (ISO)

cone dystrophy (ISO)

cone-rod dystrophy 14 (ISO)

cone-rod dystrophy 6 (ISO)

fundus dystrophy (ISO)

genetic disease (ISO)

Nervous System Malformations (ISO)

pathologic nystagmus (ISO)

retinal cone dystrophy 3B (ISO)

Stargardt disease (ISO)

Stargardt Disease 1 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

action potential (IEA)

potassium ion transmembrane transport (IEA)

potassium ion transport (IEA)

protein homooligomerization (IEA)

transmembrane transport (IEA)

Cellular Component

endomembrane system (IEA)

membrane (IEA)

monoatomic ion channel complex (IEA)

voltage-gated potassium channel complex (IEA)

Molecular Function

potassium channel activity (IEA)

protein binding (ISO)

voltage-gated potassium channel activity (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

KCNV2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	11	121,843,367 - 121,868,053 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	9	121,858,914 - 121,873,997 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	9	2,523,388 - 2,537,945 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	9	2,717,407 - 2,729,494 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	9	2,717,407 - 2,729,494 (+)	Ensembl	panpan1.1		panPan2

KCNV2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	9	2,717,510 - 2,730,037 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	9	2,717,510 - 2,730,037 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	9	2,717,510 - 2,730,037 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	9	2,707,526 - 2,719,757 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	9	2,707,525 - 2,719,757	NCBI
Celera	9	2,635,779 - 2,648,010 (+)	NCBI		Celera
Cytogenetic Map	9	p24.2	NCBI
HuRef	9	2,672,590 - 2,685,127 (+)	NCBI		HuRef
CHM1_1	9	2,717,855 - 2,730,366 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	9	2,720,267 - 2,732,772 (+)	NCBI		T2T-CHM13v2.0

Kcnv2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	19	27,299,461 - 27,314,579 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	19	27,299,988 - 27,314,579 (+)	Ensembl		GRCm39 Ensembl
GRCm38	19	27,322,061 - 27,337,179 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	19	27,322,588 - 27,337,179 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	19	27,397,109 - 27,411,669 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	19	27,389,716 - 27,404,276 (+)	NCBI		MGSCv36	mm8
Celera	19	28,106,770 - 28,121,318 (+)	NCBI		Celera
Cytogenetic Map	19	C1	NCBI
cM Map	19	21.88	NCBI

Kcnv2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	234,409,067 - 234,485,894 (+)	NCBI		GRCr8
mRatBN7.2	1	224,999,552 - 225,014,062 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	224,999,552 - 225,014,062 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	233,405,911 - 233,420,387 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	240,336,034 - 240,350,509 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	233,156,760 - 233,171,236 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	245,396,880 - 245,475,011 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	245,396,989 - 245,416,531 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	252,646,135 - 252,663,285 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	230,834,883 - 230,849,285 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	230,999,015 - 231,009,903 (+)	NCBI
Celera	1	222,175,534 - 222,189,894 (+)	NCBI		Celera
Cytogenetic Map	1	q52	NCBI

Kcnv2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955434	7,122,287 - 7,133,737 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955434	7,122,287 - 7,133,737 (+)	NCBI	ChiLan1.0	ChiLan1.0

KCNV2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	91,338,401 - 91,350,537 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	91,338,401 - 91,349,967 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	91,806,312 - 91,818,452 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	91,883,006 - 91,895,160 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	91,883,006 - 91,894,914 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	91,530,260 - 91,542,405 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	91,242,294 - 91,254,438 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	92,017,037 - 92,029,184 (+)	NCBI		UU_Cfam_GSD_1.0

Kcnv2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	138,840,340 - 138,852,434 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936503	2,319,617 - 2,332,971 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936503	2,320,570 - 2,332,833 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

KCNV2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	219,100,447 - 219,112,905 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	219,099,858 - 219,113,194 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	244,922,598 - 244,935,768 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

KCNV2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	76,825,875 - 76,838,967 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	12	76,826,283 - 76,837,774 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	65,165,788 - 65,177,825 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Kcnv2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624736	7,407,367 - 7,418,577 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624736	7,405,697 - 7,419,364 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003823354	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000011	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSPPAT00000058906 ⟹ ENSPPAP00000036016

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	9	2,717,407 - 2,729,494 (+)	Ensembl

RefSeq Acc Id:

XM_003823354 ⟹ XP_003823402

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	11	121,843,367 - 121,868,053 (-)	NCBI
NHGRI_mPanPan1	9	121,858,914 - 121,873,997 (-)	NCBI
Mhudiblu_PPA_v0	9	2,523,388 - 2,537,945 (+)	NCBI
PanPan1.1	9	2,717,407 - 2,729,494 (+)	NCBI

Sequence:

show sequence

GCTGACTGCGTTCAGACCCTGCAGGCTGGGCTGGCCTGCCCGGGACCTGAGGAAGGGCAGCTCG
GGTGGCAATGTCTGAGCCCCTAGGTGTGCTGGTCTCTCTAAGACAGTGAAGGCCACGTGATCCA
TCCTCCTAGAGGCAGTGAGCAGGTTAGGGACCCCCACGCCAGCCAGGAGGAAAAAGCAAGGAGT
CCACTTCCGCAGCCATGCTGAAACAGAGCGAGAGGAGACGGTCCTGGAGCTACAAGCCCTGGAA
CACGACGGAGAGCGAGGGCAGCCAACACCGCAGGAGCGTTTGCTCCCTGGGTGCCCGTTCCGGC
TCCCAGGCCAGCATCCAAGGCTGGACAGACGGCAACTATAACTACTACATCGAGGAAGACGAAG
ATGGGGAGGGGGAGGACCAGTGGAAGGACGACCCGGCGGAAGAGCAGCAGCAGGCACAGGAGGT
CACCACCGCCGAGCCTGAAGGCCCCAGCGACCCTCCGGCCCTGGTGTCCACGCTGAATGTGAAC
GTGGGCGGCCACAGCTACCGGCTGGACTACTGCGAGCTGGCCAGCTTCCCCAAGACGCGCCTGG
GTCGCCTGGCCACCTCCGCCAGCCGCAGCCGCCAGCTAAGCCTGTGCGACGACTACGAGGAGCA
GACGGACGAGTACTTCTTCGACCGCGACCCGGCCGTCTTCCAGCTGGTCTACAATTTCTACCTG
TCCGGGGTGCTGCTGCTGCTCGACGAGCTGTGTCCGCGCCGCTTCCTGGAGGAGCTGGGCTACT
GGGGCGTGCGGCTCAAGTACACGCCGCGCTGCTGCCGCATCTGCTTCGAGGAGCGGCGCGACGA
GCTGAGCGAACGGCTCAAGATCCAGCACGAGCTGCGCGCGCAGGCGCAGGCGGAGGAGGCGGAG
GAACTCTTCCGCGACATGCGCTTCTACGGCCCGCAGCGGCGCCGCCTCTGGAACCTCATGGAGA
AGCCATTCTCCTCGGCGGCCGCCAAGGCCATCGGGGTGGCCTCCAGCATCTTCGTGCTCGTCTC
CGTGGTGGCGCTGGCGCTCAACACCGTGGAGGAGATGCAGCAGCACCCGGAGCAGGACGAGGGC
GGCCCCGACCTGCGGCCCGTCCTGGAGCACGTGGAGATGCTGTGCATGGGCTTCTTCACACTCG
AGTACCTGCTGCGCCTGGTGTCCACGCCCGACCTGAGGCGCTTCGCGCGCAGCGCCCTCAACCT
GGTGGACCTGGTGGCCATCCTGCCGCTCTACCTTCAGCTGCTGCTTGAGTGCTTCACGGGCGAG
GACCACCAGCGCGGCCCGACGGTGGGCAGCGTGGGAAAGGTGGGTCAGGTGTTGCGCGTCATGC
GCCTCATGCGCATCTTCCGCATCCTCAAGCTGGCGCGCCACTCCACCGGCCTGCGTGCCTTCGG
CTTCACGCTGCGCCAGTGCTACCAGCAGGTGGGCTGCCTGCTGCTCTTCATCGCCATGGGCATC
TTCACTTTCTCTGCGGCCGTCTACTCTGTGGAGCACGATGTGCCCAGCACCAACTTCACTACCA
TCCCCCACTCCTGGTGGTGGGCCGCGGTGAGCATCTCCACCGTGGGCTACGGAGACATGTACCC
AGAGACCCACCTGGGCAGGTTTTTTGCCTTCCTCTGCATTGCTTTTGGGATCATTCTCAACGGG
ATGCCCATTTCCATCCTCTACAACAAGTTTTCTGATTACTACAGCAAGCTGAAGGCTTATGAGT
ATACCGCCATACGTAGGGAGAGGGGAGAGGTGAACTTCATGCAGAGAGCCAGAAAGAAGATAGC
TGAGTGTTTGGTTGGAAGCAATCCACAGCCCACCCCAAGACAAGAGAATTAGTATTTTATAGGA
CATGTGGCTGGTAGATTCCATGAACTTCAAGGCTTCATTGCTCTTTTTTTAATCATTATGATTG
GCAGCAAAAGGAAATGTGAAGCAGACATACACAAAGGCCATTTCGTTCACAAAGTACTGCTTCT
AGAAATACTTATTTTGGCCCAAACTCAGAATGTCTCATAGTTGCTCTGTGTTGTGTGAAACATC
TGACCTTCTCAATGACGCTGATATTGAAAACCTGAGGGGAGCAACAGCTTAGATTTTTCTTGTA
GCTTCTCGTGGCATCTAGCTCAATAAATATTTTTGGACTTGA

hide sequence

Protein Sequences


Protein RefSeqs	XP_003823402	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000036016
	ENSPPAP00000036016.1

RefSeq Acc Id:

XP_003823402 ⟸ XM_003823354

- UniProtKB:

A0A2R9CCF3 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MLKQSERRRSWSYKPWNTTESEGSQHRRSVCSLGARSGSQASIQGWTDGNYNYYIEEDEDGEGE
DQWKDDPAEEQQQAQEVTTAEPEGPSDPPALVSTLNVNVGGHSYRLDYCELASFPKTRLGRLAT
SASRSRQLSLCDDYEEQTDEYFFDRDPAVFQLVYNFYLSGVLLLLDELCPRRFLEELGYWGVRL
KYTPRCCRICFEERRDELSERLKIQHELRAQAQAEEAEELFRDMRFYGPQRRRLWNLMEKPFSS
AAAKAIGVASSIFVLVSVVALALNTVEEMQQHPEQDEGGPDLRPVLEHVEMLCMGFFTLEYLLR
LVSTPDLRRFARSALNLVDLVAILPLYLQLLLECFTGEDHQRGPTVGSVGKVGQVLRVMRLMRI
FRILKLARHSTGLRAFGFTLRQCYQQVGCLLLFIAMGIFTFSAAVYSVEHDVPSTNFTTIPHSW
WWAAVSISTVGYGDMYPETHLGRFFAFLCIAFGIILNGMPISILYNKFSDYYSKLKAYEYTAIR
RERGEVNFMQRARKKIAECLVGSNPQPTPRQEN

hide sequence

Ensembl Acc Id:

ENSPPAP00000036016 ⟸ ENSPPAT00000058906

Protein Domains

Ion transport Potassium channel tetramerisation-type BTB

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000040791	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000058906.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.287.70	UniProtKB/TrEMBL
	1.20.120.350	UniProtKB/TrEMBL
InterPro	Ion_trans_dom	UniProtKB/TrEMBL
	K_chnl_volt-dep_Kv	UniProtKB/TrEMBL
	K_chnl_volt-dep_Kv9	UniProtKB/TrEMBL
	SKP1/BTB/POZ_sf	UniProtKB/TrEMBL
	T1-type_BTB	UniProtKB/TrEMBL
	VG_K_chnl	UniProtKB/TrEMBL
	Volt_channel_dom_sf	UniProtKB/TrEMBL
KEGG Report	pps:100972749	UniProtKB/TrEMBL
NCBI Gene	KCNV2	ENTREZGENE
PANTHER	POTASSIUM VOLTAGE-GATED CHANNEL SUBFAMILY V MEMBER 2	UniProtKB/TrEMBL
	PTHR11537	UniProtKB/TrEMBL
Pfam	BTB_2	UniProtKB/TrEMBL
	Ion_trans	UniProtKB/TrEMBL
PRINTS	KCHANNEL	UniProtKB/TrEMBL
	KV9CHANNEL	UniProtKB/TrEMBL
	KVCHANNEL	UniProtKB/TrEMBL
Superfamily-SCOP	SSF54695	UniProtKB/TrEMBL
	Voltage-gated potassium channels	UniProtKB/TrEMBL
UniProt	A0A2R9CCF3	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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