KCNV2 (potassium voltage-gated channel modifier subfamily V member 2) - Rat Genome Database

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Gene: KCNV2 (potassium voltage-gated channel modifier subfamily V member 2) Chlorocebus sabaeus
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Symbol: KCNV2
Name: potassium voltage-gated channel modifier subfamily V member 2
RGD ID: 18771676
Description: ENCODES a protein that exhibits potassium channel activity (inferred); voltage-gated potassium channel activity (inferred); INVOLVED IN action potential (inferred); potassium ion transmembrane transport (inferred); potassium ion transport (inferred); ASSOCIATED WITH chromosome 9p deletion syndrome (ortholog); cone dystrophy (ortholog); cone-rod dystrophy 14 (ortholog); FOUND IN endomembrane system (inferred); membrane (inferred); monoatomic ion channel complex (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: potassium voltage-gated channel subfamily V member 2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11276,825,875 - 76,838,967 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1276,826,283 - 76,837,774 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603865,165,788 - 65,177,825 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
KCNV2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11276,825,875 - 76,838,967 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1276,826,283 - 76,837,774 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603865,165,788 - 65,177,825 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
KCNV2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3892,717,510 - 2,730,037 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl92,717,510 - 2,730,037 (+)EnsemblGRCh38hg38GRCh38
GRCh3792,717,510 - 2,730,037 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3692,707,526 - 2,719,757 (+)NCBINCBI36Build 36hg18NCBI36
Build 3492,707,525 - 2,719,757NCBI
Celera92,635,779 - 2,648,010 (+)NCBICelera
Cytogenetic Map9p24.2NCBI
HuRef92,672,590 - 2,685,127 (+)NCBIHuRef
CHM1_192,717,855 - 2,730,366 (+)NCBICHM1_1
T2T-CHM13v2.092,720,267 - 2,732,772 (+)NCBIT2T-CHM13v2.0
Kcnv2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391927,299,461 - 27,314,579 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1927,299,988 - 27,314,579 (+)EnsemblGRCm39 Ensembl
GRCm381927,322,061 - 27,337,179 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1927,322,588 - 27,337,179 (+)EnsemblGRCm38mm10GRCm38
MGSCv371927,397,109 - 27,411,669 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361927,389,716 - 27,404,276 (+)NCBIMGSCv36mm8
Celera1928,106,770 - 28,121,318 (+)NCBICelera
Cytogenetic Map19C1NCBI
cM Map1921.88NCBI
Kcnv2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81234,409,067 - 234,485,894 (+)NCBIGRCr8
mRatBN7.21224,999,552 - 225,014,062 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1224,999,552 - 225,014,062 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1233,405,911 - 233,420,387 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01240,336,034 - 240,350,509 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01233,156,760 - 233,171,236 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01245,396,880 - 245,475,011 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1245,396,989 - 245,416,531 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01252,646,135 - 252,663,285 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41230,834,883 - 230,849,285 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11230,999,015 - 231,009,903 (+)NCBI
Celera1222,175,534 - 222,189,894 (+)NCBICelera
Cytogenetic Map1q52NCBI
Kcnv2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554347,122,287 - 7,133,737 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554347,122,287 - 7,133,737 (+)NCBIChiLan1.0ChiLan1.0
KCNV2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v211121,843,367 - 121,868,053 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan19121,858,914 - 121,873,997 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v092,523,388 - 2,537,945 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.192,717,407 - 2,729,494 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl92,717,407 - 2,729,494 (+)Ensemblpanpan1.1panPan2
KCNV2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1191,338,401 - 91,350,537 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl191,338,401 - 91,349,967 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha191,806,312 - 91,818,452 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0191,883,006 - 91,895,160 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl191,883,006 - 91,894,914 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1191,530,260 - 91,542,405 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0191,242,294 - 91,254,438 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0192,017,037 - 92,029,184 (+)NCBIUU_Cfam_GSD_1.0
Kcnv2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947138,840,340 - 138,852,434 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365032,319,617 - 2,332,971 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365032,320,570 - 2,332,833 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KCNV2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1219,100,447 - 219,112,905 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11219,099,858 - 219,113,194 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21244,922,598 - 244,935,768 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Kcnv2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247367,407,367 - 7,418,577 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247367,405,697 - 7,419,364 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression

ectoderm
endocrine system
hemolymphoid system
mesenchyme
mesoderm
nervous system
reproductive system
2 1 17 17 17 2 1

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_007969374 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JACDXN010000006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCSAT00000006759   ⟹   ENSCSAP00000004937
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl1276,826,283 - 76,837,774 (-)Ensembl
RefSeq Acc Id: XM_007969374   ⟹   XP_007967565
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11276,825,875 - 76,838,967 (-)NCBI
Vero_WHO_p1.0NW_02366603865,165,788 - 65,177,825 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_007967565 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000004937
  ENSCSAP00000004937.1
RefSeq Acc Id: XP_007967565   ⟸   XM_007969374
- UniProtKB: A0A0D9R8J8 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCSAP00000004937   ⟸   ENSCSAT00000006759


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000008677 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000006759.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.287.70 UniProtKB/TrEMBL
  1.20.120.350 UniProtKB/TrEMBL
InterPro Ion_trans_dom UniProtKB/TrEMBL
  K_chnl_volt-dep_Kv UniProtKB/TrEMBL
  K_chnl_volt-dep_Kv9 UniProtKB/TrEMBL
  SKP1/BTB/POZ_sf UniProtKB/TrEMBL
  T1-type_BTB UniProtKB/TrEMBL
  Volt_channel_dom_sf UniProtKB/TrEMBL
KEGG Report csab:103219521 UniProtKB/TrEMBL
NCBI Gene KCNV2 ENTREZGENE
PANTHER POTASSIUM VOLTAGE-GATED CHANNEL SUBFAMILY V MEMBER 2 UniProtKB/TrEMBL
  PTHR11537 UniProtKB/TrEMBL
Pfam BTB_2 UniProtKB/TrEMBL
  Ion_trans UniProtKB/TrEMBL
PRINTS KCHANNEL UniProtKB/TrEMBL
  KV9CHANNEL UniProtKB/TrEMBL
  KVCHANNEL UniProtKB/TrEMBL
Superfamily-SCOP SSF54695 UniProtKB/TrEMBL
  Voltage-gated potassium channels UniProtKB/TrEMBL
UniProt A0A0D9R8J8 ENTREZGENE, UniProtKB/TrEMBL