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Gene: Usp13 (ubiquitin specific peptidase 13) Rattus norvegicus
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Symbol: Usp13
Name: ubiquitin specific peptidase 13
Description: Predicted to have several functions, including BAT3 complex binding activity; Lys48-specific deubiquitinase activity; and cysteine-type peptidase activity. Predicted to be involved in several processes, including protein stabilization; proteolysis; and regulation of cellular catabolic process. Predicted to localize to cytosol and nucleus. Orthologous to human USP13 (ubiquitin specific peptidase 13); INTERACTS WITH (+)-schisandrin B; acrylamide; decabromodiphenyl ether.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC310306; ubiquitin carboxyl-terminal hydrolase 13; ubiquitin specific protease 13 (isopeptidase T-3); ubiquitin thiolesterase 13
Orthologs:
Homo sapiens (human) : USP13 (ubiquitin specific peptidase 13)  HGNC  Alliance
Mus musculus (house mouse) : Usp13 (ubiquitin specific peptidase 13 (isopeptidase T-3))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Usp13 (ubiquitin specific peptidase 13)
Pan paniscus (bonobo/pygmy chimpanzee) : USP13 (ubiquitin specific peptidase 13)
Canis lupus familiaris (dog) : USP13 (ubiquitin specific peptidase 13)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Usp13 (ubiquitin specific peptidase 13)
Sus scrofa (pig) : USP13 (ubiquitin specific peptidase 13)
Chlorocebus sabaeus (African green monkey) : USP13 (ubiquitin specific peptidase 13)
Heterocephalus glaber (naked mole-rat) : Usp13 (ubiquitin specific peptidase 13)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02119,197,153 - 119,317,507 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2119,197,239 - 119,317,500 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02138,961,986 - 138,965,318 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.02138,848,099 - 138,947,514 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42119,006,687 - 119,116,188 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12118,951,691 - 119,057,605 (+)NCBI
Celera2110,680,308 - 110,788,182 (+)NCBICelera
Cytogenetic Map2q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Usp13
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1306044
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.