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Gene: USP13 (ubiquitin specific peptidase 13) Chlorocebus sabaeus

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Symbol:

USP13

Name:

ubiquitin specific peptidase 13

RGD ID:

18736316

Description:

ENCODES a protein that exhibits BAT3 complex binding (inferred); cysteine-type deubiquitinase activity (inferred); cysteine-type endopeptidase activity (inferred); INVOLVED IN protein K29-linked deubiquitination (ortholog); protein K6-linked deubiquitination (ortholog); protein K63-linked deubiquitination (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); Currarino syndrome (ortholog); skin disease (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

ubiquitin carboxyl-terminal hydrolase 13; ubiquitin specific peptidase 13 (isopeptidase T-3)

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	15	9,619,065 - 9,753,490 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	15	9,624,300 - 9,753,466 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666063	18,478,400 - 18,623,806 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Arsenic Poisoning (ISO)

Currarino syndrome (ISO)

skin disease (ISO)

syndromic microphthalmia 3 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

autophagy (IEA)

cell population proliferation (IEA)

maintenance of unfolded protein (IEA)

positive regulation of ERAD pathway (IEA)

protein deubiquitination (IEA)

protein K29-linked deubiquitination (IEA,ISO)

protein K6-linked deubiquitination (IEA,ISO)

protein K63-linked deubiquitination (IEA,ISO)

protein stabilization (IEA,ISO)

proteolysis (IEA)

regulation of autophagy (IEA)

regulation of DNA-templated transcription (IEA)

Molecular Function

BAT3 complex binding (IEA)

cysteine-type deubiquitinase activity (IEA)

cysteine-type endopeptidase activity (IEA)

cysteine-type peptidase activity (IEA)

K48-linked deubiquitinase activity (IEA)

proteasome binding (IEA)

protein binding (ISO)

protein-folding chaperone binding (IEA)

ubiquitin binding (IEA)

ubiquitin protein ligase binding (IEA)

ubiquitin-like protein ligase binding (IEA)

zinc ion binding (IEA)

References

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

USP13
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	15	9,619,065 - 9,753,490 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	15	9,624,300 - 9,753,466 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666063	18,478,400 - 18,623,806 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

USP13
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	179,653,040 - 179,789,401 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	179,653,032 - 179,804,366 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	179,370,828 - 179,507,189 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	180,853,635 - 180,984,675 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	3	180,853,642 - 180,984,683	NCBI
Celera	3	177,801,905 - 177,938,115 (+)	NCBI		Celera
Cytogenetic Map	3	q26.33	NCBI
HuRef	3	176,774,718 - 176,910,711 (+)	NCBI		HuRef
CHM1_1	3	179,334,034 - 179,470,263 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	3	182,456,880 - 182,592,926 (+)	NCBI		T2T-CHM13v2.0

Usp13
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	32,870,432 - 32,992,224 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	32,871,695 - 32,992,220 (+)	Ensembl		GRCm39 Ensembl
GRCm38	3	32,816,283 - 32,938,075 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	32,817,546 - 32,938,071 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	32,716,548 - 32,834,179 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	33,009,175 - 33,126,806 (+)	NCBI		MGSCv36	mm8
Celera	3	32,725,174 - 32,842,630 (+)	NCBI		Celera
Cytogenetic Map	3	A3	NCBI
cM Map	3	15.88	NCBI

Usp13
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	117,502,811 - 117,617,049 (+)	NCBI		GRCr8
mRatBN7.2	2	115,576,912 - 115,689,153 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	115,577,091 - 115,686,222 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	122,183,691 - 122,291,902 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	120,296,325 - 120,404,549 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	114,998,508 - 115,106,662 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	119,197,153 - 119,317,507 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	119,197,239 - 119,317,500 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	138,848,099 - 138,947,514 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Rnor_5.0	2	138,961,986 - 138,965,318 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	119,006,687 - 119,116,188 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	118,951,691 - 119,057,605 (+)	NCBI
Celera	2	110,680,308 - 110,788,182 (+)	NCBI		Celera
Cytogenetic Map	2	q24	NCBI

Usp13
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955420	8,835,549 - 8,919,933 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955420	8,835,858 - 8,919,837 (+)	NCBI	ChiLan1.0	ChiLan1.0

USP13
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	177,521,579 - 177,654,597 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	177,526,444 - 177,656,313 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	176,685,541 - 176,818,360 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	184,856,295 - 184,988,305 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	184,855,388 - 184,983,158 (+)	Ensembl	panpan1.1		panPan2

USP13
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	34	13,059,099 - 13,175,980 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	34	13,059,092 - 13,171,234 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	34	17,200,915 - 17,303,172 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	34	12,957,093 - 13,074,094 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	34	12,957,085 - 13,069,581 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	34	13,008,227 - 13,125,027 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	34	12,990,863 - 13,107,688 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	34	13,230,757 - 13,347,935 (+)	NCBI		UU_Cfam_GSD_1.0

Usp13
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	109,698,615 - 109,804,274 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936566	3,416,389 - 3,522,133 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936566	3,416,468 - 3,522,127 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

USP13
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	117,700,119 - 117,826,944 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	117,700,080 - 117,826,951 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	126,874,063 - 126,917,846 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Usp13
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624730	57,384,884 - 57,495,765 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624730	57,384,878 - 57,495,761 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in USP13
3880 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

ectoderm	endocrine system	hemolymphoid system	mesenchyme	mesoderm	nervous system	reproductive system
76	36	20	36	36	60	20

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_007972018	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007972019	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007972020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007972021	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007972022	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000031	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCSAT00000011188 ⟹ ENSCSAP00000009269

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	15	9,624,300 - 9,753,466 (-)	Ensembl

RefSeq Acc Id:

XM_007972018 ⟹ XP_007970209

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	15	9,619,065 - 9,753,490 (-)	NCBI
Vero_WHO_p1.0	NW_023666063	18,478,400 - 18,623,806 (-)	NCBI

Sequence:

show sequence

CGCTGGCGCCACCGCCGCCGGCGGACAGCGCGCTCCGGCTCCGGCTCGGCTCGCTCGGCTCCGG
TGCGTGCCGAGGCCATGCAGCGCCGGGGCGCCCTGTTCGGCATGCCGGGCGGCAGCGGAGGCCG
GAAGATGGCTGCAGGAGACATCGGCGAGCTGCTGGTGCCCCACATGCCCACGATCCGCGTGCCC
AGGTCCGGCGACAGGGTCTACAAGAACGAGTGCGCCTTCTCCTACGACTCCCCCAATTCTGAAG
GTGGACTCTATGTATGCATGAATACATTTTTGGCCTTTGGAAGGGAACATGTTGAAAGACATTT
TCGAAAAACTGGACAGAGTGTATACATGCACCTGAAAAGACATGTCCGAGAGAAGGTAAGAGGG
GCGTCTGGTGGAGCGTTACCGAAAAGGAGGAATTCCAAGATTTTTTTAGATCTAGATACTGATG
ACGATTTAAATAGCGACGATTATGAATATGAAGATGAAGCCAAACTTGTTATATTCCCAGATCA
CTATGAAATAGCACTACCAAATATTGAGGAGTTACCAGCCCTGGTAACAATTGCTTGTGATGCA
GTTCTCAGCTCAAAATCTCCATACAGAAAGCAGGACCCAGACACGTGGGAAAATGAATTGCCAG
TATCTAAATATGCCAACAACCTCACCCAACTGGACAATGGCGTCAGGATTCCTCCAAGTGGTTG
GAAGTGTGCCAGATGCGACCTGCGAGAAAACCTCTGGTTGAATCTGACTGACGGCTCTGTCCTA
TGTGGAAAGTGGTTCTTTGACAGCTCTGGGGGCAATGGGCATGCGCTGGAGCATTACAGAGACA
TGGGCTACCCACTAGCCGTGAAACTGGGAACCATCACTCCTGACGGGGCAGATGTTTATTCTTT
TCAAGAAGAAGAACCTGTTTTGGATCCTCATTTGGCCAAGCACTTAGCGCATTTTGGAATTGAT
ATGCTTCATATGCATGGGACAGAGAATGGGCTCCAGGACAATGACATCAAGCCGAGGGTCAGTG
AGTGGGAAGTGATCCAGGAGTCGGGCACGAAGCTGAAGCCAATGTATGGTCCTGGCTACACGGG
TCTGAAGAACTTGGGCAACAGCTGCTATCTGAGCTCTGTCATGCAGGCCATCTTCAGCATCCCA
GAATTCCAGAGAGCGTATGTAGGAAACCTTCCCAGAATATTTGACTACTCGCCTTTAGATCCAA
CACAAGATTTCAACACACAGATGACTAAGTTAGGACATGGCCTTCTCTCAGGCCAGTATTCAAA
GCCTCCGGTGAAATCTGAACTCATTGAACAGGTGATGAAGGAGGAGCACAAGCCACAGCAGAAC
GGGATCTCTCCGCGCATGTTTAAGGCCTTTGTAAGCAAGAGCCACCCGGAATTCTCCTCTAACA
GACAGCAAGATGCCCAGGAATTCTTCTTGCACCTGGTGAATCTAGTAGAGAGGAACCGCATCGG
CTCGGAAAACCCAAGCGATGTTTTTCGTTTTTTGGTGGAAGAACGCATTCAGTGCTGTCAGACC
CGGAAAGTCCGCTACACGGAGAGGGTGGATTACCTGATGCAGTTACCTGTGGCCATGGAGGCGG
CAACCAACAAGGATGAACTGATCGCTTATGAACTAACGAGAAGGGAAGCAGAAGCAAACAGAAG
ACCCCTTCCTGAGTTGGTGCGTGCCAAGATACCATTTGGTGCCTGCCTTCAGGCCTTCTCTGAA
CCAGAAAACGTTGACGATTTCTGGAGCAGTGCCCTACAAGCAAAGTCTGCGGGTGTGAAAACAT
CTCGCTTTGCTTCATTCCCTGAATACTTGGTAGTGCAGATAAAGAAGTTCACTTTTGGTCTTGA
CTGGGTTCCCAAAAAATTTGATGTTTCTATTGATATGCCAGACCTTCTTGATATCAACCATCTC
CGAGCCAGGGGGTTACAGCCAGGAGAGGAGGAACTTCCAGACATCAGCCCCCCCATAGTCATTC
CTGATGACTCAAAAGATCGCCTGATGAACCAATTGATAGACCCATCAGACATCGATGAGTCATC
AGTGATGCAGCTGGCCGAGATGGGTTTCCCGCTGGAAGCATGTCGCAAGGCTGTGTACTTCACT
GGAAACATGGGTGCTGAGGTGGCCTTTAACTGGATCATTGTTCACATGGAAGAGCCAGATTTTG
CTGAGCCGCTGACCATGCCTGGTTATGGAGGGGCAGCTTCTGCTGGAGCCTCTGTTTTTGGTGC
TACTGGATTGGATAACCAACCTCCAGAGGAAATCGTTGCTATCATCACCTCCATGGGATTTCAG
AGAAATCAGGCTATTCAGGCACTACGAGCAACGAATAATAACCTGGAAAGAGCACTGGATTGGA
TCTTTAGCCACCCTGAGTTTGAAGAAGACAGTGATTTTGTGATTGAGATGGAGAATAACGCCAA
TGCAAACATTATTTCTGAGGCCAAGCCTGAAGGACCTAGAGTCAAGGATGGATCTGGAACATAT
GAGCTATTTGCATTCATCAGTCACATGGGAACATCCACAATGAGTGGTCATTATATTTGCCATA
TCAAAAAGGAAGGAAGATGGGTGATTTACAATGACCACAAAGTTTGTGCCTCAGAAAGGCCCCC
TAAAGACCTGGGCTACATGTACTTTTACCACAGGATACCAAGCTAAACCTCAAACATAAAAGTT
GGCAAGAAGAAGCCATACGCCTTTTTAATTTGCCAAAAAAAAAAAAAAAAAAAAGAAGAAGAAG
AAGAAGAAGTTGAAACAACCAGACATGAAGGAATACATGTGGTATTTATAGTTTATTTAAAGAG
CACACTCAGTTGACACCTTCTGAAATAGAACTGGGAAGAAATTTCTATTAGTGATGATACACTG
TTATATTGTAGATAGTTTTTATAAATGTTCAAAAAGAGGATGATATTTAAAAACAAAAAAGTAT
TCATATTGCTGGTGGAGGATCTGCCATCAGCACATCAGAAATGGAGATGTGCCCCCAGCCCTCT
ATTTTGCTTTGGGGGTCAGTGGTAGTGGCCTCCGGAGAAACCAAATAATGTGGCCCGTGGTGTG
GCCTTACCCACAGCAAATGAAAAGCCCACTTGTGTTTCATATAGAAAATCAGCAATTGGGTGGG
GCTTTATTTGTGACATATTTTTTTTCATGACATACAATAGTTTCTGATGTATCCATGTAGATAT
TATGCTCTGTCCATAATAGAGCCTCTGCAATGAAAGATATTTTTAATTTAAGTCGTATCAAAAT
TCATAATATGATTGTGTGAATGTGTGTGAGAGTGACTGAGAGTGTGAGACTTACTAGAAAAGGG
AGTCTACTAGAAAATCTGTGACAAGTTGGTTTTTAAAGGCTGAACAGTTGGTATTAAGCATATC
TGAAAAAAGCAAGTAAATATTTTCACAAAACTATGACTCAGGAACCTTTGAGAAGATTAGTTCC
CCACTTAGATTTTAAGGAGTAAAAAAAAGGGCTGAGTTATGCCTTTAAGTGCTGTCAAGAATTC
ACTTGGGTTTGGGACATTTGCTGGTGTAATGCTAGATGCCCACAGCAGCATAATATTGTACTTT
GTCAAAGGTAGGTAAATTCTCTGTTTCTCAGCAGCCCTTTCCCCAAAAGGTATGGTGTTTATTT
TTAGTTAAAATAGCTAATCTCTTTTTACCATCTCACATGACAACTCTTTGGAGTCATGTCACAT
GCCCCAAATTTGTCTGTAATTTTCCCGTCTCTGAGCTCTTTATCTGCCTCTATTTCCTTGTTTT
TCTGGGGCCATAGTCTCATCTCTGCCCTTTTTTGGTTTATCACCTTCTGACTTGTCTTTACTGC
TTATCTGATGTGACCGACAGTGTGATCTTGGAGACTCTAAGGATTTTAGATGCAAAGAAATTTT
ATATAGACTATCCTTTTCATTTTGGTTATTTCAGCATTTTAGTTGCAACCTGGGATTAGATTAG
AGTTTCCAATGTGATGAAAAGTGGAATGATAGCATTCTGTAATTTCTATAATTTTCCTACTGGT
CTGTACCAAATTCTAGAGTCTCTGGAGTTGCTATTTCAGCTTATTCGGTCAAATGAAAAAGGAT
TTATTGCTGCCTGTTTAACATGTATTTGTTTGGTTGAAAGGGTCTTTTTAGAAACTGTAGGAAA
ACAAACAGAACAACCAGGTGAAATAAAGCACAGACATTGGATTAGGACGCAGTGAGTTGTGAGC
AATCAGGATTCTGGGTATGTTGGGGGGCCCTGTCTCATAGGTGATCCTTTGGTACCATGTGAGC
GAGGGACATGGTGTCTGAGGTCCATGGCCTGGAGACCTGGGTGCTGCTCCTAGTTGGCTGTGGA
CCTTGGGCAAGTCCTTCATCCTTCTTGTGCCTCACTGTCCTCATCTGAACAATGGTATGATGAC
ACCTGCCCTTCTTTCCTATCATGCTTTGAGGATACAGTGAGATTGGTTACAGTGAACCTTCAAT
GAGTAGAATGTGGTGTGCCATGGTGGGTCATAGTAGACTGCCTTTCCTCCTCTGATGTTTTTCT
CAATTTGGGAACAAATGAGATTGGCAGGAGGAGGGAGCTCATGGTGCAGTACTTTTCTACTAAA
GTGTGCCCACTGGTGTCACCTCCTAATGTTGACTTGGATTTCCTAAAGCAGTCCCACTCTGTTA
TGAGAGTCACTGACTCCCGTGGACATCCCCACACTAAGCAGCCTTACAAAATCCAGTCCCTTAG
GGCAGAGGGAGTGTCATAGAATAATAACTCCAAACCCGCATCAAAAATGGCTTGTTTTCAGTGA
TGTTATAAAGCAAAGACCTGTTTTTTGGAATTGGGGGTGACTGAGGGGTTTGGATTGAAATGTG
GATAAAGACAGCATGTGTATTTTGAATAAAATAAAAATTTTGTAATAAAACTTTGAAAAATCAG
TGGTGTAAAATCAATATTTAAGACTATAGGCTATAAATTGTTTGATTTCATTAACTAGCCCTTT
TGATGCCTAGACATATTGTAAGAAATTCTGCTATGGCTGCCTTTTCTTCTGCCTCACAACACAA
AGGGCTATTTCTACAAGGCAAAGTTTTGTATATGTGCTATTCTTTACTTCAGATTGAGAGCTGG
GAAAAACTGGAGTAAATAATGGGTTTCTTACTCGCTTAAAAACCTATTTATATGTGTATCTCAA
TATATACAAGGCAGGTTCCCCTATAAAAGTCTGGAATGTACTGCTTAATTTTACACTTGTGTAG
ACACAATTATTTGTGACTGAAAAGTGGAATAACGTGTGGATTGTGTCAACTCATTATCAGTCTG
TTAGGAGTCCTCTATGTGAGGCCTGGTGGTCTAATTGTGAAATTCTCACTGTATATGGGTGTCT
GTGTGAAAGACAGCACTTTCTTCCTGTAAATATCTTTTGATGTCCATTTGTGTAGAATGAATGT
GTGTTTGGAAAAGGTAATGTATCAAAGTTTTTATTTTGCCAGTTGATCTAAATTCCCATATAAC
CAATCAGAAATCCAGTTTGGTTCAGATTGGGATTTTCTTGTAAAGAAAAAAAAAATGTATGCAG
AAAAGACTTTGGAAGAATCATGTGTTAGTGACCCTTTACATCAACGTTGCTTCAGTATTTTGGA
ATTGACTAGGCTGCTTTCTCCTACCTACAAGAGAATGTGCCTAACATTTCCCAGTGGTTACTTT
GGGCCATAGGAAGTCCAATGGGGATAGCTCGAGCCTCTTGCTCCCTGAGTCATTTATTCCCTTT
ACCTGAACCAGAGCCTTATCTGCAATTCATAGTGAGAGCACCTGGGTCTGGATCCTGACTCCAC
TCTAAGTGAGGTGGGACTGAATCACTGTACCTCTCTGGGCCTTTTTATTTGAAACAAGTGGGTT
AGGCTAGATTAGCTCAGAAGTCCTCTCTTGCCCTAACGTTTTATTTTTATTTTCCTGTGGTTAC
CACTAGAGTCTGACATGTGAAATATGAGGGATCACTTAGAGGTTTGGATGTTGTATTTTTGCGT
TGTTACAGCTTATACTGCCCAGTTGAGGACCTGTGTTATTCTTAGTGCCCCTGACACCCCTCTG
TATTCCTACTCCTCTTATCTATACTTTTTTTGGTAGTCATCCCACTTTTTTTTTTTTTGAGACA
GAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGTGCAATCTCAGCTCACTGCAACCTCCAC
CTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCTTCCCAAGTAGCTGGGATTACTGGTGCACGCC
ACTAAGCCTGGCTAATTTTTCTACTTTTAGTAGAGACAGGGTTTTGCCATGTTGGCCAGGCTGG
TCTTGAACTCTTGACCTCAACCTGCCTCAGCCTCCCAAAGTGCTGGGATTACACGCATGAGCTG
CCACGTCCAGCCCCACTTTTTTCTACTCTTGAAACAAACAACTTTCCAGTCCATGAGGTACTTT
GGCTCCATCCCCCTCAAAAACAAAACAAAAATCCATTTAAAATGTCCTCCTAGAAAAGCCTCAG
AACTGCCTTCAACTAAATCTATCACCTTTATAGAATATTTTAAAATTCTAGAAGAGGATGGGAA
ACAAAATTCTAATTCAGTTAGAGCTATGATCCCCAAATAAGTGCTGACACAATTGTCTTCCACA
GAAAGGCCGTCTTTGTCATCTTGTAGGCATCACTGTTGCTAAATCACATCAGTACAGGCCTTCT
GTGGGGAGATGGCAGGGGGCAGGGGCAGGAGCGGGGATGGGATTAGATAAAGTGTGATAATATC
CTTACTTTAGATTTAAAAAAAATCCTAGGCTGTACAACAAGGTTCTGTACTCTTGAGCTGGTGT
CTGAGATCACCAGCACAGTGTCACAGAGATTTTCCACTCCGTGAATCACTCTAAAAGAGTTTGC
ATAAGATTCTGTAGACCTGTGCTATTCAATGTGGCAGTCAACAGCCATATGTGACGATGACTAC
TCAAAATTTGGCTTGTTCAAATCGAGACTGTGCTGTATACATAAAATACACATCAGATTTTGAA
GGCTTGGTACCAAAAAGGAATTTAAAGTATTTCATATTGATAACATGCTGAAATGACACTATTT
TTGATGTATTCGGTAAAATATTAACAATGTAATATATATTATTAAAATTCTTTTCACCCATTTT
TATCTTTAAAAAAAATGTATCCCCTAAAGAATTTAAAATTAGATATCTGGATAACGTTATACTT
CTATTGGACAGACCCACTCTAGACTTACATGGTGTGGGGTAGGCAGTGAAATCCGTAAATAGGA
AAGGCAATTCTGCAAAGCATCTAAATAAACAGAAATAACACAAATATTTTTGCTGGAGTCAGGA
GCACTATGAGGCACAGAACATCTCCTAGAAAGCAGATTTTTTTTTTTTCTGCCGAAAAACCAGT
ATATATGTATGATCCCAATTAAAAGATAAAAGCAAATGAGCCCAAACTGCCTGTCTTCAGCTTT
GCCTGGGAACTGCTACCTTTGCACCTTTGCCAGCATCTTCTAGATGCCAAAGATATTAGCCACA
TGAGGGTGTTGGGCATATTCGTTTCATTGTAGGCAAAATTCTCTTGTGGTTTTCCCTCCCCAGG
TATTGTTGAGTCTGTTCAAAGCTGAGTGTGTTGAAACACTGCACAAATCCTGCCACTCTCAATG
TGCCGCTTATCTCAGCCTTAGCAGAGGCTGAGTCTGTTCCTGTGCCTACCTGTCCAGCAGGTTT
TGATGTTGGCTCCTGAAAGAGTTTGTATTTATTTTATTTTGCACTAGTCACAGTTGTTGTTCAA
CTATATCAAATGTTTTGGGAGAGTATTTGCCTGTGATGGAAAGAGAGATGGATGATTTATTGCT
TCAATTGTTTTAAATTAAAAGCTATTCTCACAA

hide sequence

RefSeq Acc Id:

XM_007972020 ⟹ XP_007970211

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	15	9,624,225 - 9,752,398 (-)	NCBI
Vero_WHO_p1.0	NW_023666063	18,483,533 - 18,622,466 (-)	NCBI

Sequence:

show sequence

ACCTTCCGGTGCCTCCACTCGGGCAGCAGAAATAGAGGATCTACTGGATTGTGATGGTTTTCTT
AAGCCTTCCCCCCTTACCCTTCTAAATGAGTCACTTGGACTGACATGCTCAAGTATAAATTATT
AAAAGTTCAATCCCGAGTCGTGACCTCGGAGAATGGAGGAGGAAGCTGAGAGGGATCGCCGCCT
TCTACCCCAGGCGGTTGTTGGTGGTTTTCACCTGGTTCTATGTGAATGTGTGAGAAGCAGCAGG
AGGAATTCTGAAGGTGGACTCTATGTATGCATGAATACATTTTTGGCCTTTGGAAGGGAACATG
TTGAAAGACATTTTCGAAAAACTGGACAGAGTGTATACATGCACCTGAAAAGACATGTCCGAGA
GAAGGTAAGAGGGGCGTCTGGTGGAGCGTTACCGAAAAGGAGGAATTCCAAGATTTTTTTAGAT
CTAGATACTGATGACGATTTAAATAGCGACGATTATGAATATGAAGATGAAGCCAAACTTGTTA
TATTCCCAGATCACTATGAAATAGCACTACCAAATATTGAGGAGTTACCAGCCCTGGTAACAAT
TGCTTGTGATGCAGTTCTCAGCTCAAAATCTCCATACAGAAAGCAGGACCCAGACACGTGGGAA
AATGAATTGCCAGTATCTAAATATGCCAACAACCTCACCCAACTGGACAATGGCGTCAGGATTC
CTCCAAGTGGTTGGAAGTGTGCCAGATGCGACCTGCGAGAAAACCTCTGGTTGAATCTGACTGA
CGGCTCTGTCCTATGTGGAAAGTGGTTCTTTGACAGCTCTGGGGGCAATGGGCATGCGCTGGAG
CATTACAGAGACATGGGCTACCCACTAGCCGTGAAACTGGGAACCATCACTCCTGACGGGGCAG
ATGTTTATTCTTTTCAAGAAGAAGAACCTGTTTTGGATCCTCATTTGGCCAAGCACTTAGCGCA
TTTTGGAATTGATATGCTTCATATGCATGGGACAGAGAATGGGCTCCAGGACAATGACATCAAG
CCGAGGGTCAGTGAGTGGGAAGTGATCCAGGAGTCGGGCACGAAGCTGAAGCCAATGTATGGTC
CTGGCTACACGGGTCTGAAGAACTTGGGCAACAGCTGCTATCTGAGCTCTGTCATGCAGGCCAT
CTTCAGCATCCCAGAATTCCAGAGAGCGTATGTAGGAAACCTTCCCAGAATATTTGACTACTCG
CCTTTAGATCCAACACAAGATTTCAACACACAGATGACTAAGTTAGGACATGGCCTTCTCTCAG
GCCAGTATTCAAAGCCTCCGGTGAAATCTGAACTCATTGAACAGGTGATGAAGGAGGAGCACAA
GCCACAGCAGAACGGGATCTCTCCGCGCATGTTTAAGGCCTTTGTAAGCAAGAGCCACCCGGAA
TTCTCCTCTAACAGACAGCAAGATGCCCAGGAATTCTTCTTGCACCTGGTGAATCTAGTAGAGA
GGAACCGCATCGGCTCGGAAAACCCAAGCGATGTTTTTCGTTTTTTGGTGGAAGAACGCATTCA
GTGCTGTCAGACCCGGAAAGTCCGCTACACGGAGAGGGTGGATTACCTGATGCAGTTACCTGTG
GCCATGGAGGCGGCAACCAACAAGGATGAACTGATCGCTTATGAACTAACGAGAAGGGAAGCAG
AAGCAAACAGAAGACCCCTTCCTGAGTTGGTGCGTGCCAAGATACCATTTGGTGCCTGCCTTCA
GGCCTTCTCTGAACCAGAAAACGTTGACGATTTCTGGAGCAGTGCCCTACAAGCAAAGTCTGCG
GGTGTGAAAACATCTCGCTTTGCTTCATTCCCTGAATACTTGGTAGTGCAGATAAAGAAGTTCA
CTTTTGGTCTTGACTGGGTTCCCAAAAAATTTGATGTTTCTATTGATATGCCAGACCTTCTTGA
TATCAACCATCTCCGAGCCAGGGGGTTACAGCCAGGAGAGGAGGAACTTCCAGACATCAGCCCC
CCCATAGTCATTCCTGATGACTCAAAAGATCGCCTGATGAACCAATTGATAGACCCATCAGACA
TCGATGAGTCATCAGTGATGCAGCTGGCCGAGATGGGTTTCCCGCTGGAAGCATGTCGCAAGGC
TGTGTACTTCACTGGAAACATGGGTGCTGAGGTGGCCTTTAACTGGATCATTGTTCACATGGAA
GAGCCAGATTTTGCTGAGCCGCTGACCATGCCTGGTTATGGAGGGGCAGCTTCTGCTGGAGCCT
CTGTTTTTGGTGCTACTGGATTGGATAACCAACCTCCAGAGGAAATCGTTGCTATCATCACCTC
CATGGGATTTCAGAGAAATCAGGCTATTCAGGCACTACGAGCAACGAATAATAACCTGGAAAGA
GCACTGGATTGGATCTTTAGCCACCCTGAGTTTGAAGAAGACAGTGATTTTGTGATTGAGATGG
AGAATAACGCCAATGCAAACATTATTTCTGAGGCCAAGCCTGAAGGACCTAGAGTCAAGGATGG
ATCTGGAACATATGAGCTATTTGCATTCATCAGTCACATGGGAACATCCACAATGAGTGGTCAT
TATATTTGCCATATCAAAAAGGAAGGAAGATGGGTGATTTACAATGACCACAAAGTTTGTGCCT
CAGAAAGGCCCCCTAAAGACCTGGGCTACATGTACTTTTACCACAGGATACCAAGCTAAACCTC
AAACATAAAAGTTGGCAAGAAGAAGCCATACGCCTTTTTAATTTGCCAAAAAAAAAAAAAAAAA
AAAGAA

hide sequence

RefSeq Acc Id:

XM_007972022 ⟹ XP_007970213

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	15	9,624,225 - 9,705,216 (-)	NCBI
Vero_WHO_p1.0	NW_023666063	18,483,627 - 18,575,452 (-)	NCBI

Sequence:

show sequence

GTCAGTGAGTGTGCACGGCTGCTAGCTAGATGCGCGTGACTCTGTGTCAGGTAACAATTGCTTG
TGATGCAGTTCTCAGCTCAAAATCTCCATACAGAAAGCAGGACCCAGACACGTGGGAAAATGAA
TTGCCAGTATCTAAATATGCCAACAACCTCACCCAACTGGACAATGGCGTCAGGATTCCTCCAA
GTGGTTGGAAGTGTGCCAGATGCGACCTGCGAGAAAACCTCTGGTTGAATCTGACTGACGGCTC
TGTCCTATGTGGAAAGTGGTTCTTTGACAGCTCTGGGGGCAATGGGCATGCGCTGGAGCATTAC
AGAGACATGGGCTACCCACTAGCCGTGAAACTGGGAACCATCACTCCTGACGGGGCAGATGTTT
ATTCTTTTCAAGAAGAAGAACCTGTTTTGGATCCTCATTTGGCCAAGCACTTAGCGCATTTTGG
AATTGATATGCTTCATATGCATGGGACAGAGAATGGGCTCCAGGACAATGACATCAAGCCGAGG
GTCAGTGAGTGGGAAGTGATCCAGGAGTCGGGCACGAAGCTGAAGCCAATGTATGGTCCTGGCT
ACACGGGTCTGAAGAACTTGGGCAACAGCTGCTATCTGAGCTCTGTCATGCAGGCCATCTTCAG
CATCCCAGAATTCCAGAGAGCGTATGTAGGAAACCTTCCCAGAATATTTGACTACTCGCCTTTA
GATCCAACACAAGATTTCAACACACAGATGACTAAGTTAGGACATGGCCTTCTCTCAGGCCAGT
ATTCAAAGCCTCCGGTGAAATCTGAACTCATTGAACAGGTGATGAAGGAGGAGCACAAGCCACA
GCAGAACGGGATCTCTCCGCGCATGTTTAAGGCCTTTGTAAGCAAGAGCCACCCGGAATTCTCC
TCTAACAGACAGCAAGATGCCCAGGAATTCTTCTTGCACCTGGTGAATCTAGTAGAGAGGAACC
GCATCGGCTCGGAAAACCCAAGCGATGTTTTTCGTTTTTTGGTGGAAGAACGCATTCAGTGCTG
TCAGACCCGGAAAGTCCGCTACACGGAGAGGGTGGATTACCTGATGCAGTTACCTGTGGCCATG
GAGGCGGCAACCAACAAGGATGAACTGATCGCTTATGAACTAACGAGAAGGGAAGCAGAAGCAA
ACAGAAGACCCCTTCCTGAGTTGGTGCGTGCCAAGATACCATTTGGTGCCTGCCTTCAGGCCTT
CTCTGAACCAGAAAACGTTGACGATTTCTGGAGCAGTGCCCTACAAGCAAAGTCTGCGGGTGTG
AAAACATCTCGCTTTGCTTCATTCCCTGAATACTTGGTAGTGCAGATAAAGAAGTTCACTTTTG
GTCTTGACTGGGTTCCCAAAAAATTTGATGTTTCTATTGATATGCCAGACCTTCTTGATATCAA
CCATCTCCGAGCCAGGGGGTTACAGCCAGGAGAGGAGGAACTTCCAGACATCAGCCCCCCCATA
GTCATTCCTGATGACTCAAAAGATCGCCTGATGAACCAATTGATAGACCCATCAGACATCGATG
AGTCATCAGTGATGCAGCTGGCCGAGATGGGTTTCCCGCTGGAAGCATGTCGCAAGGCTGTGTA
CTTCACTGGAAACATGGGTGCTGAGGTGGCCTTTAACTGGATCATTGTTCACATGGAAGAGCCA
GATTTTGCTGAGCCGCTGACCATGCCTGGTTATGGAGGGGCAGCTTCTGCTGGAGCCTCTGTTT
TTGGTGCTACTGGATTGGATAACCAACCTCCAGAGGAAATCGTTGCTATCATCACCTCCATGGG
ATTTCAGAGAAATCAGGCTATTCAGGCACTACGAGCAACGAATAATAACCTGGAAAGAGCACTG
GATTGGATCTTTAGCCACCCTGAGTTTGAAGAAGACAGTGATTTTGTGATTGAGATGGAGAATA
ACGCCAATGCAAACATTATTTCTGAGGCCAAGCCTGAAGGACCTAGAGTCAAGGATGGATCTGG
AACATATGAGCTATTTGCATTCATCAGTCACATGGGAACATCCACAATGAGTGGTCATTATATT
TGCCATATCAAAAAGGAAGGAAGATGGGTGATTTACAATGACCACAAAGTTTGTGCCTCAGAAA
GGCCCCCTAAAGACCTGGGCTACATGTACTTTTACCACAGGATACCAAGCTAAACCTCAAACAT
AAAAGTTGGCAAGAAGAAGCCATACGCCTTTTTAATTTGCCAAAAAAAAAAAAAAAAAAAAGAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_007970209	(Get FASTA)	NCBI Sequence Viewer
	XP_007970211	(Get FASTA)	NCBI Sequence Viewer
	XP_007970213	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000009269.1

RefSeq Acc Id:	XP_007970209 ⟸ XM_007972018
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9RKY0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_007970211 ⟸ XM_007972020
- Peptide Label:	isoform X2
- UniProtKB:	A0A0D9RKY0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_007970213 ⟸ XM_007972022
- Peptide Label:	isoform X3
- UniProtKB:	A0A0D9RKY0 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCSAP00000009269 ⟸ ENSCSAT00000011188

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000013094	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000011188.1	UniProtKB/TrEMBL
Gene3D-CATH	3.30.40.10	UniProtKB/TrEMBL
	Cysteine proteinases	UniProtKB/TrEMBL
	DNA helicase RuvA subunit, C-terminal domain	UniProtKB/TrEMBL
InterPro	Papain-like_cys_pep_sf	UniProtKB/TrEMBL
	Peptidase_C19_UCH	UniProtKB/TrEMBL
	Ub_carboxyl-term_hydrolase	UniProtKB/TrEMBL
	UBA	UniProtKB/TrEMBL
	UBA-like_sf	UniProtKB/TrEMBL
	Ubiquitinyl_hydrolase	UniProtKB/TrEMBL
	UBP13_Znf-UBP_var	UniProtKB/TrEMBL
	USP_CS	UniProtKB/TrEMBL
	USP_dom	UniProtKB/TrEMBL
	Znf_RING/FYVE/PHD	UniProtKB/TrEMBL
	Znf_UBP	UniProtKB/TrEMBL
KEGG Report	csab:103221201	UniProtKB/TrEMBL
NCBI Gene	USP13	ENTREZGENE
PANTHER	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE	UniProtKB/TrEMBL
	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 14	UniProtKB/TrEMBL
Pfam	UBA	UniProtKB/TrEMBL
	UBA_7	UniProtKB/TrEMBL
	UCH	UniProtKB/TrEMBL
	zf-UBP	UniProtKB/TrEMBL
	zf-UBP_var	UniProtKB/TrEMBL
PIRSF	UBP	UniProtKB/TrEMBL
PROSITE	UBA	UniProtKB/TrEMBL
	USP_1	UniProtKB/TrEMBL
	USP_2	UniProtKB/TrEMBL
	USP_3	UniProtKB/TrEMBL
	ZF_UBP	UniProtKB/TrEMBL
SMART	UBA	UniProtKB/TrEMBL
	ZnF_UBP	UniProtKB/TrEMBL
Superfamily-SCOP	RING/U-box	UniProtKB/TrEMBL
	SSF46934	UniProtKB/TrEMBL
	SSF54001	UniProtKB/TrEMBL
UniProt	A0A0D9RKY0	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD