GABRB2 (gamma-aminobutyric acid type A receptor subunit beta2) - Rat Genome Database

Send us a Message



Rat Genome Database
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Grant Resources Citing RGD About Us Contact Us
Search by Genomic Position Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quantitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Behavioral & Substance Use Disorder Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: GABRB2 (gamma-aminobutyric acid type A receptor subunit beta2) Canis lupus familiaris
Analyze
Symbol: GABRB2
Name: gamma-aminobutyric acid type A receptor subunit beta2
RGD ID: 12141832
Description: ENCODES a protein that exhibits GABA-A receptor activity (ortholog); inhibitory extracellular ligand-gated monoatomic ion channel activity (ortholog); ligand-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential (ortholog); INVOLVED IN cellular response to histamine (ortholog); inner ear auditory receptor cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amblyopia (ortholog); anxiety disorder (ortholog); FOUND IN GABA receptor complex (ortholog); glutamatergic synapse (ortholog); postsynaptic specialization membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: gamma-aminobutyric acid receptor subunit beta-2; gamma-aminobutyric acid type A receptor beta2 subunit
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1449,342,527 - 49,579,697 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl449,342,508 - 49,578,092 (+)EnsemblCanFam3.1 EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha449,230,876 - 49,476,874 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0449,771,687 - 49,919,166 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl449,771,977 - 50,018,741 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1449,578,711 - 49,828,742 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0449,712,838 - 49,956,441 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0450,235,113 - 50,479,017 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
GABRB2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1449,342,527 - 49,579,697 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl449,342,508 - 49,578,092 (+)EnsemblCanFam3.1 EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha449,230,876 - 49,476,874 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0449,771,687 - 49,919,166 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl449,771,977 - 50,018,741 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1449,578,711 - 49,828,742 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0449,712,838 - 49,956,441 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0450,235,113 - 50,479,017 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
GABRB2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385161,288,436 - 161,548,404 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5161,288,418 - 161,549,044 (-)EnsemblGRCh38.p14 Ensemblhg38GRCh38
GRCh375160,715,443 - 160,975,410 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 365160,648,014 - 160,907,708 (-)NCBIBuild 36Build 36hg18NCBI36
Build 345160,653,448 - 160,907,708NCBI
Celera5156,747,290 - 157,006,998 (-)NCBICelera
Cytogenetic Map5q34NCBI
HuRef5155,807,898 - 156,067,549 (-)NCBIHuRef
CHM1_15160,147,827 - 160,407,563 (-)NCBICHM1_1
T2T-CHM13v2.05161,817,252 - 162,077,933 (-)NCBIT2T-CHM13v2.0
Gabrb2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391142,310,342 - 42,523,418 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1142,310,493 - 42,523,417 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381142,419,515 - 42,632,591 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1142,419,757 - 42,629,028 (+)EnsemblGRCm38.p6 Ensemblmm10GRCm38
MGSCv371142,233,259 - 42,446,093 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361142,263,180 - 42,472,451 (+)NCBIMGSCv36mm8
Celera1146,252,427 - 46,464,396 (+)NCBICelera
Cytogenetic Map11A5NCBI
cM Map1125.08NCBI
Gabrb2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81027,438,127 - 27,657,680 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1027,438,238 - 27,655,171 (+)EnsemblGRCr8
mRatBN7.21026,936,592 - 27,156,141 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1026,936,551 - 27,151,251 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1031,687,629 - 31,916,745 (+)NCBIUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01031,176,165 - 31,405,281 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01026,662,808 - 26,891,915 (+)NCBIUTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd1030,386,658 - 30,623,189 (+)NCBI
Lyon_Normotensive1031,034,576 - 31,271,111 (+)NCBI
Lyon_Hypertensive1032,729,926 - 32,966,451 (+)NCBI
F344_StmMcwi1032,678,702 - 32,915,212 (+)NCBI
Rnor_6.01027,973,694 - 28,193,072 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1027,973,681 - 28,187,565 (+)EnsemblRnor_6.0 Ensemblrn6Rnor6.0
Rnor_5.01027,816,796 - 28,032,603 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41027,602,085 - 27,819,145 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1026,450,647 - 26,662,574 (+)NCBICelera
RGSC_v3.11027,603,057 - 27,820,693 (+)NCBI
Cytogenetic Map10q21NCBI
Gabrb2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540815,131,909 - 15,363,169 (-)EnsemblChiLan1.0 Ensembl
ChiLan1.0NW_00495540815,126,235 - 15,363,169 (-)NCBIChiLan1.0ChiLan1.0
GABRB2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24156,474,166 - 156,733,420 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15154,613,712 - 154,872,963 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05156,678,750 - 156,937,614 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15163,373,530 - 163,632,301 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5163,374,346 - 163,632,301 (-)EnsemblPanPan1.1 EnsemblpanPan2panpan1.1
Gabrb2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mIctTri1.hap11172,216,894 - 172,449,641 (-)NCBImIctTri1.hap1
HiC_Itri_2NW_024407213103,677,848 - 103,910,350 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365152,127,693 - 2,355,090 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365152,127,107 - 2,359,697 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GABRB2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1661,984,925 - 62,239,937 (+)EnsemblSscrofa11.1 EnsemblsusScr11Sscrofa11.1
Sscrofa11.11661,984,923 - 62,240,902 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21667,212,830 - 67,464,338 (+)NCBISscrofa10.2Sscrofa10.2susScr3
GABRB2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mChlSab1.0.hap12320,843,605 - 21,104,668 (+)NCBImChlSab1.0.hap1
Vero_WHO_p1.0NW_02366603413,661,103 - 13,924,348 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
ChlSab1.12363,636,094 - 63,894,587 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2363,637,109 - 63,893,370 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Gabrb2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473328,022,632 - 28,236,211 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
HetGla_female_1.0 EnsemblNW_00462473328,022,635 - 28,230,865 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
Naked mole-rat maternal Ensembl417,856,499 - 18,065,021 (-)Ensembl
Gabrb2
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1925,286,309 - 25,493,196 (+)NCBIRrattus_CSIRO_v1Rrattus_CSIRO_v1

Variants

.
Variants in GABRB2
2443 total Variants

Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 4 5 23 22 16 6 6 6 6 31 21 12 14 10

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_014113039 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014113040 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038473762 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038473763 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038473764 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038473765 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038473766 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038496073 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038496083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038496089 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038496097 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038496101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038534842 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038534843 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038534844 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038534845 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038534846 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038599143 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038599144 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038599145 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038599146 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038599147 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038663449 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038663450 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038663451 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038663453 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000051 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000088 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000355 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCAFT00000015972   ⟹   ENSCAFP00000014773
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl449,342,508 - 49,578,092 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000027322   ⟹   ENSCAFP00000025409
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl449,373,080 - 49,578,092 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000061688   ⟹   ENSCAFP00000054041
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl449,342,508 - 49,578,074 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845001419   ⟹   ENSCAFP00845001105
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl449,771,977 - 49,875,479 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845001434   ⟹   ENSCAFP00845001120
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl449,771,980 - 50,018,741 (+)Ensembl
RefSeq Acc Id: XM_038473762   ⟹   XP_038329690
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1449,579,058 - 49,823,088 (+)NCBI
RefSeq Acc Id: XM_038473763   ⟹   XP_038329691
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1449,578,711 - 49,823,088 (+)NCBI
RefSeq Acc Id: XM_038473764   ⟹   XP_038329692
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1449,579,969 - 49,823,088 (+)NCBI
RefSeq Acc Id: XM_038473765   ⟹   XP_038329693
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1449,580,168 - 49,828,742 (+)NCBI
RefSeq Acc Id: XM_038473766   ⟹   XP_038329694
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1449,580,170 - 49,823,106 (+)NCBI
RefSeq Acc Id: XM_038496073   ⟹   XP_038352001
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha449,231,223 - 49,475,251 (+)NCBI
RefSeq Acc Id: XM_038496083   ⟹   XP_038352011
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha449,230,876 - 49,475,251 (+)NCBI
RefSeq Acc Id: XM_038496089   ⟹   XP_038352017
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha449,232,141 - 49,475,251 (+)NCBI
RefSeq Acc Id: XM_038496097   ⟹   XP_038352025
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha449,232,340 - 49,476,874 (+)NCBI
RefSeq Acc Id: XM_038496101   ⟹   XP_038352029
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha449,232,342 - 49,475,269 (+)NCBI
RefSeq Acc Id: XM_038534842   ⟹   XP_038390770
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0450,235,460 - 50,473,376 (+)NCBI
RefSeq Acc Id: XM_038534843   ⟹   XP_038390771
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0450,235,113 - 50,473,376 (+)NCBI
RefSeq Acc Id: XM_038534844   ⟹   XP_038390772
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0450,236,371 - 50,473,376 (+)NCBI
RefSeq Acc Id: XM_038534845   ⟹   XP_038390773
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0450,236,569 - 50,479,017 (+)NCBI
RefSeq Acc Id: XM_038534846   ⟹   XP_038390774
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0450,236,571 - 50,473,394 (+)NCBI
RefSeq Acc Id: XM_038599143   ⟹   XP_038455071
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0449,713,185 - 49,950,789 (+)NCBI
RefSeq Acc Id: XM_038599144   ⟹   XP_038455072
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0449,712,838 - 49,950,789 (+)NCBI
RefSeq Acc Id: XM_038599145   ⟹   XP_038455073
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0449,714,095 - 49,950,789 (+)NCBI
RefSeq Acc Id: XM_038599146   ⟹   XP_038455074
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0449,714,294 - 49,956,441 (+)NCBI
RefSeq Acc Id: XM_038599147   ⟹   XP_038455075
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0449,714,296 - 49,950,807 (+)NCBI
RefSeq Acc Id: XM_038663449   ⟹   XP_038519377
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0449,773,136 - 49,919,166 (+)NCBI
RefSeq Acc Id: XM_038663450   ⟹   XP_038519378
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0449,772,036 - 49,917,315 (+)NCBI
RefSeq Acc Id: XM_038663451   ⟹   XP_038519379
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0449,771,687 - 49,917,315 (+)NCBI
RefSeq Acc Id: XM_038663453   ⟹   XP_038519381
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0449,772,947 - 49,917,315 (+)NCBI
Ensembl Acc Id: ENSCAFP00000014773   ⟸   ENSCAFT00000015972
Ensembl Acc Id: ENSCAFP00000025409   ⟸   ENSCAFT00000027322
Ensembl Acc Id: ENSCAFP00000054041   ⟸   ENSCAFT00000061688
RefSeq Acc Id: XP_038329691   ⟸   XM_038473763
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038329690   ⟸   XM_038473762
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038329692   ⟸   XM_038473764
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038329693   ⟸   XM_038473765
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038329694   ⟸   XM_038473766
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038455072   ⟸   XM_038599144
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038455071   ⟸   XM_038599143
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038455073   ⟸   XM_038599145
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038455074   ⟸   XM_038599146
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038455075   ⟸   XM_038599147
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038519379   ⟸   XM_038663451
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038519378   ⟸   XM_038663450
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038519381   ⟸   XM_038663453
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038519377   ⟸   XM_038663449
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038352011   ⟸   XM_038496083
- Peptide Label: isoform X8
- UniProtKB: A0A8C0JJE6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038352001   ⟸   XM_038496073
- Peptide Label: isoform X8
- UniProtKB: A0A8C0JJE6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038352017   ⟸   XM_038496089
- Peptide Label: isoform X8
- UniProtKB: A0A8C0JJE6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038352025   ⟸   XM_038496097
- Peptide Label: isoform X8
- UniProtKB: A0A8C0JJE6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038352029   ⟸   XM_038496101
- Peptide Label: isoform X9
- UniProtKB: A0A8C0JMT5 (UniProtKB/TrEMBL),   A0A2H4NNJ3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038390771   ⟸   XM_038534843
- Peptide Label: isoform X6
- UniProtKB: A0A8C0JJE6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038390770   ⟸   XM_038534842
- Peptide Label: isoform X6
- UniProtKB: A0A8C0JJE6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038390772   ⟸   XM_038534844
- Peptide Label: isoform X6
- UniProtKB: A0A8C0JJE6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038390773   ⟸   XM_038534845
- Peptide Label: isoform X6
- UniProtKB: A0A8C0JJE6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038390774   ⟸   XM_038534846
- Peptide Label: isoform X7
- UniProtKB: A0A2H4NNJ3 (UniProtKB/TrEMBL),   A0A8C0JMT5 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCAFP00845001120   ⟸   ENSCAFT00845001434
Ensembl Acc Id: ENSCAFP00845001105   ⟸   ENSCAFT00845001419
Protein Domains
Neurotransmitter-gated ion-channel ligand-binding   Neurotransmitter-gated ion-channel transmembrane


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000017251 Ensembl
  ENSCAFG00845000854 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00845001419.1 UniProtKB/TrEMBL
  ENSCAFT00845001434.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.58.390 UniProtKB/TrEMBL
  2.70.170.10 UniProtKB/TrEMBL
InterPro GABAA/Glycine_rcpt UniProtKB/TrEMBL
  GABAAb_rcpt UniProtKB/TrEMBL
  Neur_chan_lig-bd UniProtKB/TrEMBL
  Neur_chan_lig-bd_sf UniProtKB/TrEMBL
  Neur_channel UniProtKB/TrEMBL
  Neuro-gated_channel_TM_sf UniProtKB/TrEMBL
  Neuro_actylchol_rec UniProtKB/TrEMBL
  Neurotrans-gated_channel_TM UniProtKB/TrEMBL
  Neurotransmitter_ion_chnl_CS UniProtKB/TrEMBL
NCBI Gene GABRB2 ENTREZGENE
PANTHER PTHR18945 UniProtKB/TrEMBL
Pfam Neur_chan_LBD UniProtKB/TrEMBL
  Neur_chan_memb UniProtKB/TrEMBL
PRINTS GABAARBETA UniProtKB/TrEMBL
  GABAARECEPTR UniProtKB/TrEMBL
  NRIONCHANNEL UniProtKB/TrEMBL
PROSITE NEUROTR_ION_CHANNEL UniProtKB/TrEMBL
Superfamily-SCOP SSF63712 UniProtKB/TrEMBL
  SSF90112 UniProtKB/TrEMBL
UniProt A0A2H4NNJ3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0JJE6 ENTREZGENE
  A0A8C0JMT5 ENTREZGENE
  A0A8I3MX69_CANLF UniProtKB/TrEMBL
  A0A8I3RPG5_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:41059 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-05-11 GABRB2  gamma-aminobutyric acid type A receptor subunit beta2  GABRB2  gamma-aminobutyric acid type A receptor beta2 subunit  Symbol and/or name change 19259463 PROVISIONAL