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Gene: GABRB2 (gamma-aminobutyric acid type A receptor subunit beta2) Chlorocebus sabaeus

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Symbol:

GABRB2

Name:

gamma-aminobutyric acid type A receptor subunit beta2

RGD ID:

18364773

Description:

ENCODES a protein that exhibits GABA-A receptor activity (ortholog); inhibitory extracellular ligand-gated monoatomic ion channel activity (ortholog); ligand-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential (ortholog); INVOLVED IN cellular response to histamine (ortholog); inner ear auditory receptor cell differentiation (ortholog); synaptic transmission, GABAergic (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amblyopia (ortholog); anxiety disorder (ortholog); FOUND IN GABA receptor complex (ortholog); glutamatergic synapse (ortholog); postsynaptic specialization membrane (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

gamma-aminobutyric acid receptor subunit beta-2; gamma-aminobutyric acid type A receptor beta2 subunit

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mChlSab1.0.hap1	23	20,843,605 - 21,104,668 (+)	NCBI		mChlSab1.0.hap1
Vero_WHO_p1.0	NW_023666034	13,661,103 - 13,924,348 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0
ChlSab1.1	23	63,636,094 - 63,894,587 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	23	63,637,109 - 63,893,370 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

acute myeloid leukemia (ISO)

amblyopia (ISO)

anxiety disorder (ISO)

Arachnodactyly (ISO)

Ataxia (ISO)

autistic disorder (ISO)

brain disease (ISO)

Cerebral Visual Impairment and Intellectual Disability (ISO)

cervical cancer (ISO)

clubfoot (ISO)

developmental and epileptic encephalopathy 92 (ISO)

Developmental Disabilities (ISO)

dystonia (ISO)

Enuresis (ISO)

epilepsy (ISO)

esotropia (ISO)

Failure to Thrive (ISO)

Familial Pancreatic Carcinoma (ISO)

focal epilepsy (ISO)

genetic disease (ISO)

hereditary spastic paraplegia 11 (ISO)

hydronephrosis (ISO)

intellectual disability (ISO)

Joint Instability (ISO)

melanoma (ISO)

microcephaly (ISO)

movement disease (ISO)

Muscle Hypotonia (ISO)

Muscle Spasticity (ISO)

Neurodevelopmental Disorders (ISO)

Neurologic Gait Disorders (ISO)

obesity (ISO)

ovarian serous cystadenocarcinoma (ISO)

pathologic nystagmus (ISO)

prostate cancer (ISO)

sarcoma (ISO)

schizophrenia (ISO)

scoliosis (ISO)

status epilepticus (ISO)

stomach cancer (ISO)

strabismus (ISO)

thymoma (ISO)

Thyroid Carcinoma, Nonmedullary 1 (ISO)

urinary bladder cancer (ISO)

uterine corpus endometrial carcinoma (ISO)

Vision Disorders (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular response to histamine (ISO)

chemical synaptic transmission (IEA)

chloride transmembrane transport (IEA)

cochlea development (IEA)

gamma-aminobutyric acid signaling pathway (IEA)

inhibitory synapse assembly (IEA)

inner ear auditory receptor cell differentiation (ISO)

inner ear receptor cell development (IEA)

innervation (IEA)

monoatomic ion transmembrane transport (IEA)

monoatomic ion transport (IEA)

neuron development (IEA)

regulation of postsynaptic membrane potential (IEA)

synaptic transmission, GABAergic (ISO)

Cellular Component

dendritic spine (IEA)

GABA receptor complex (ISO)

GABA-A receptor complex (IEA)

GABA-ergic synapse (IEA)

glutamatergic synapse (ISO)

membrane (IEA)

plasma membrane (IEA)

postsynaptic membrane (IEA)

postsynaptic specialization membrane (IEA,ISO)

presynaptic active zone membrane (ISO)

synapse (IEA)

Molecular Function

chloride channel activity (IEA)

extracellular ligand-gated monoatomic ion channel activity (IEA)

GABA receptor activity (IEA)

GABA-A receptor activity (IEA,ISO)

GABA-gated chloride ion channel activity (IEA)

inhibitory extracellular ligand-gated monoatomic ion channel activity (ISO)

ligand-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential (ISO)

monoatomic ion channel activity (IEA)

protein binding (ISO)

transmembrane signaling receptor activity (IEA)

transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential (IEA)

References

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

GABRB2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mChlSab1.0.hap1	23	20,843,605 - 21,104,668 (+)	NCBI		mChlSab1.0.hap1
Vero_WHO_p1.0	NW_023666034	13,661,103 - 13,924,348 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0
ChlSab1.1	23	63,636,094 - 63,894,587 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	23	63,637,109 - 63,893,370 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM

GABRB2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	161,288,436 - 161,548,404 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	161,288,418 - 161,549,044 (-)	Ensembl		GRCh38.p14 Ensembl	hg38	GRCh38
GRCh37	5	160,715,443 - 160,975,410 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	160,648,014 - 160,907,708 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	5	160,653,448 - 160,907,708	NCBI
Celera	5	156,747,290 - 157,006,998 (-)	NCBI		Celera
Cytogenetic Map	5	q34	NCBI
HuRef	5	155,807,898 - 156,067,549 (-)	NCBI		HuRef
CHM1_1	5	160,147,827 - 160,407,563 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	5	161,817,252 - 162,077,933 (-)	NCBI		T2T-CHM13v2.0

Gabrb2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	42,310,342 - 42,523,418 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	42,310,493 - 42,523,417 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	11	42,419,515 - 42,632,591 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	42,419,757 - 42,629,028 (+)	Ensembl		GRCm38.p6 Ensembl	mm10	GRCm38
MGSCv37	11	42,233,259 - 42,446,093 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	11	42,263,180 - 42,472,451 (+)	NCBI		MGSCv36	mm8
Celera	11	46,252,427 - 46,464,396 (+)	NCBI		Celera
Cytogenetic Map	11	A5	NCBI
cM Map	11	25.08	NCBI

Gabrb2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	27,438,127 - 27,657,680 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	10	27,438,238 - 27,655,171 (+)	Ensembl				GRCr8
mRatBN7.2	10	26,936,592 - 27,156,141 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	26,936,551 - 27,151,251 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	10	31,687,629 - 31,916,745 (+)	NCBI	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	31,176,165 - 31,405,281 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	26,662,808 - 26,891,915 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd	10	30,386,658 - 30,623,189 (+)	NCBI
Lyon_Normotensive	10	31,034,576 - 31,271,111 (+)	NCBI
Lyon_Hypertensive	10	32,729,926 - 32,966,451 (+)	NCBI
F344_StmMcwi	10	32,678,702 - 32,915,212 (+)	NCBI
Rnor_6.0	10	27,973,694 - 28,193,072 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	27,973,681 - 28,187,565 (+)	Ensembl		Rnor_6.0 Ensembl	rn6	Rnor6.0
Rnor_5.0	10	27,816,796 - 28,032,603 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	10	27,602,085 - 27,819,145 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	10	26,450,647 - 26,662,574 (+)	NCBI		Celera
RGSC_v3.1	10	27,603,057 - 27,820,693 (+)	NCBI
Cytogenetic Map	10	q21	NCBI

Gabrb2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955408	15,131,909 - 15,363,169 (-)	Ensembl		ChiLan1.0 Ensembl
ChiLan1.0	NW_004955408	15,126,235 - 15,363,169 (-)	NCBI	ChiLan1.0	ChiLan1.0

GABRB2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	156,474,166 - 156,733,420 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	154,613,712 - 154,872,963 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	156,678,750 - 156,937,614 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	163,373,530 - 163,632,301 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	163,374,346 - 163,632,301 (-)	Ensembl		PanPan1.1 Ensembl	panPan2	panpan1.1

GABRB2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	4	49,342,527 - 49,579,697 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	4	49,342,508 - 49,578,092 (+)	Ensembl		CanFam3.1 Ensembl	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	4	49,230,876 - 49,476,874 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	4	49,771,687 - 49,919,166 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	4	49,771,977 - 50,018,741 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	4	49,578,711 - 49,828,742 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	4	49,712,838 - 49,956,441 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	4	50,235,113 - 50,479,017 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Gabrb2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mIctTri1.hap1	1	172,216,894 - 172,449,641 (-)	NCBI		mIctTri1.hap1
HiC_Itri_2	NW_024407213	103,677,848 - 103,910,350 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936515	2,127,693 - 2,355,090 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936515	2,127,107 - 2,359,697 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

GABRB2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	16	61,984,925 - 62,239,937 (+)	Ensembl		Sscrofa11.1 Ensembl	susScr11	Sscrofa11.1
Sscrofa11.1	16	61,984,923 - 62,240,902 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	16	67,212,830 - 67,464,338 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Gabrb2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624733	28,022,632 - 28,236,211 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2
HetGla_female_1.0 Ensembl	NW_004624733	28,022,635 - 28,230,865 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
Naked mole-rat maternal Ensembl	4	17,856,499 - 18,065,021 (-)	Ensembl

Gabrb2
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	9	25,286,309 - 25,493,196 (+)	NCBI	Rrattus_CSIRO_v1	Rrattus_CSIRO_v1

Variants

Variants in GABRB2
6658 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

ectoderm	endocrine system	hemolymphoid system	mesenchyme	mesoderm	nervous system	reproductive system
76	36	20	36	36	60	20

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_008015209	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008015210	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008015211	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008015212	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038005231	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_073010543	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JBLKOC010000023	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCSAT00000008430 ⟹ ENSCSAP00000006576

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	23	63,637,109 - 63,893,370 (-)	Ensembl

RefSeq Acc Id:

XM_008015209 ⟹ XP_008013400

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
mChlSab1.0.hap1	23	20,843,605 - 21,104,668 (+)	NCBI
Vero_WHO_p1.0	NW_023666034	13,661,408 - 13,919,040 (+)	NCBI
ChlSab1.1	23	63,636,094 - 63,894,571 (-)	NCBI

Sequence:

show sequence

CTGGGTGTGCGAGTCCCCTGGGCCCGTGGAAGGGAAGAAGAGGACGAGGTGGCGCGGAGACCGC
GGGAGAACACAGTGCCTCCGGAGGTGGGGGGCTCTTCCTCATTTTGCCTGCCTTCTAGGGACCG
CTCGGGCTTCTTGTATCCAGAGGTACAGCCCCTGAACGGTCGGGAGTACCCGTCCCCTGCCCGG
GCCGAGGGGCAGGGGGCACCAGCTCCGCACGCGGCCGGAGTGGGCGGCGAGCGCGGGCCCGCGA
GGAAATCTGCTCGATCCCCGGCAGCCGCCGCTTCCCCTTTGATGTTTTGGTACGCCGTGCGCAT
GCGCCTCACATTAGAATTACTGCACTGGGCAGACTAAGTTGGATCTCCTCTCTTCAGTGAAACC
CTCAATTCCATCAAAAACTAAAGGGATGTGGAGAGTCCGGAAAAGGGGCTACTTTGGGATTTGG
TCCTTCCCTTTAATAATCGCCGCTGTCTGTGCGCAGAGTGTCAATGACCCTAGTAATATGTCGC
TGGTTAAAGAGACGGTGGATAGACTCCTGAAAGGCTATGACATTCGTCTGAGACCAGATTTTGG
AGGTCCCCCGGTGGCTGTGGGAATGAACATTGATATTGCCAGCATCGATATGGTTTCTGAAGTC
AATATGGATTATACCTTGACAATGTACTTTCAACAAGCCTGGAGAGATAAGAGGTTGTCCTATA
ATGTAATACCTTTAAACTTGACTCTGGACAACAGAGTGGCAGACCAGCTCTGGGTGCCTGATAC
CTATTTCCTGAACGATAAGAAGTCATTTGTGCACGGAGTGACTGTTAAGAACCGCATGATCCGC
CTGCATCCTGATGGCACCGTCCTTTATGGACTCAGAATCACAACCACAGCTGCCTGCATGATGG
ACCTAAGGAGGTACCCACTGGATGAACAAAACTGCACCTTGGAAATTGAGAGCTATGGATACAC
AACTGATGACATTGAATTTTACTGGCGTGGCGATGATAATGCAGTAACAGGAGTAACGAAAATT
GAACTTCCACAGTTCTCTATTGTAGATTACAAACTTATCACCAAGAAGGTTGTTTTTTCCACAG
GTTCCTATCCCAGGTTATCCCTCAGCTTTAAGCTTAAGAGAAACATTGGCTACTTTATCCTGCA
AACATACATGCCTTCCATCCTGATTACCATCCTCTCCTGGGTCTCCTTCTGGATTAACTACGAT
GCTTCAGCTGCAAGGGTGGCATTAGGAATCACAACTGTCCTCACAATGACCACAATCAACACCC
ACCTCCGGGAAACTCTCCCTAAAATCCCCTATGTGAAGGCCATTGACATGTACCTGATGGGGTG
CTTTGTTTTCGTTTTCATGGCCCTTCTGGAATATGCTTTAGTCAACTACATCTTCTTTGGGAGG
GGGCCCCAACGCCAAAAGAAAGCAGCTGAGAAGGCTGCCAGTGCCAACAATGAGAAGATGCGCC
TGGACGTCAACAAGATGGACCCCCATGAGAACATCTTACTGAGCACTCTCGAGATAAAAAATGA
AATGGCCACATCTGAGGCTGTGATGGGACTTGGAGACCCCAGAAGCACAATGCTAGCCTATGAT
GCCTCCAGCATTCAGTACCGGAAAGCCGGGTTGCCCAGACATAGTTTTGGCCGAAATGCTCTGG
AACGACATGTGGCACAAAAGAAAAGTCGCCTGAGGAGACGCGCCTCCCAACTGAAAATCACCAT
CCCTGACTTGACTGATGTCAATGCCATAGATCGGTGGTCCCGCATATTCTTCCCAGTGGTTTTT
TCCTTCTTCAACATCGTCTATTGGCTTTATTATGTGAACTAAAACATGGCCTGCCACTGGAAGC
AAGGACTAGATTCCTCCTCAAACCAGTTGTACAGCCTGATGTAGGACTTGGAAAACACATCAAT
CCAGGACAAAAGTGATGCTAAAATACCTTAGTTGCTGGCCTATCCTGTGGTCCATTTCATACCA
TTTGGGTTGCTTCTGCTAAGTAACGAAAACACTAAGGTCCTTGTGGTTTTCCAGTTAAAACGCA
AGTGATTTGTACACATGGTGGCAAGACAGCCTGAGTGCTCCATGTTGTCTGTTTAGTATGCAGC
CTACTCAGAGGGGAATAATTTGGAAGATATTCTTAGAAGACTCAATAGCATTGTCAGTCATTGG
TCATAACCAGATACTCCTCATCTTCCTTTTTAAGGTTGGCATGCTGTTGAGATGGCATTGTGCT
TATGAAACATTATCTGTAATGCCATGCAAACACATTACTTGAAGATGATCTATGCTTTTCTTAC
TAAGATGATAATGGTGTCATGGGAAGGTTATTCCCACTGGTTTCTAAAAGATTCTCTTGTGATT
GGAGCAGGCTAGCGGAATCAAGACAGAGACTCAGGAAACTGATTTGGCCAGTCTCTTAGCTTGA
GCACAGAGGATCAACTATGATGTCTTTCATTTTGGCATTTAGATGAGGAGACTTCTGAACATTA
TTGTGCATGGTGGCCAACGAAATTTTTGCTAAACAGCTATTTCCTAGGTGGTTAAAGTAAGAGT
TAACACGAGCAGAGTAGAAAATCAGAAATGACGGTTGTAACAAAAATCAAGCAAGCAAGCAAGC
ATGACCCTTATCAGTTCCACACAGCATCTGGTCTATACGTACTGTGTCTAGTGGCAAAGGGTGA
GTAAGAGAGATTGTTTTTCCAACATCACAAGCTTTTGACAGCATACCTAAAGAGGTTTTTATAG
TTTAATCAAAGATAACCATGAAATACAAAAGTTAGAGAAATTAGAATAGTCTTAGATACTCAGG
TTAGATTCAGAGTCATTCAAATACACAAAAACA

hide sequence

RefSeq Acc Id:

XM_008015212 ⟹ XP_008013403

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
mChlSab1.0.hap1	23	20,843,605 - 21,104,668 (+)	NCBI
Vero_WHO_p1.0	NW_023666034	13,661,103 - 13,924,348 (+)	NCBI
ChlSab1.1	23	63,636,094 - 63,894,587 (-)	NCBI

Sequence:

show sequence

AGGGAAGAGGCAGCCTCTGGGTGTGCGAGTCCCCTGGGCCCGTGGAAGGGAAGAAGAGGACGAG
GTGGCGCGGAGACCGCGGGAGAACACAGTGCCTCCGGAGGTGGGGGGCTCTTCCTCATTTTGCC
TGCCTTCTAGGGACCGCTCGGGCTTCTTGTATCCAGAGGTACAGCCCCTGAACGGTCGGGAGTA
CCCGTCCCCTGCCCGGGCCGAGGGGCAGGGGGCACCAGCTCCGCACGCGGCCGGAGTGGGCGGC
GAGCGCGGGCCCGCGAGGAAATCTGCTCGATCCCCGGCAGCCGCCGCTTCCCCTTTGATGTTTT
GGTACGCCGTGCGCATGCGCCTCACATTAGAATTACTGCACTGGGCAGACTAAGTTGGATCTCC
TCTCTTCAGTGAAACCCTCAATTCCATCAAAAACTAAAGGGATGTGGAGAGTCCGGAAAAGGGG
CTACTTTGGGATTTGGTCCTTCCCTTTAATAATCGCCGCTGTCTGTGCGCAGAGTGTCAATGAC
CCTAGTAATATGTCGCTGGTTAAAGAGACGGTGGATAGACTCCTGAAAGGCTATGACATTCGTC
TGAGACCAGATTTTGGAGGTCCCCCGGTGGCTGTGGGAATGAACATTGATATTGCCAGCATCGA
TATGGTTTCTGAAGTCAATATGGATTATACCTTGACAATGTACTTTCAACAAGCCTGGAGAGAT
AAGAGGTTGTCCTATAATGTAATACCTTTAAACTTGACTCTGGACAACAGAGTGGCAGACCAGC
TCTGGGTGCCTGATACCTATTTCCTGAACGATAAGAAGTCATTTGTGCACGGAGTGACTGTTAA
GAACCGCATGATCCGCCTGCATCCTGATGGCACCGTCCTTTATGGACTCAGAATCACAACCACA
GCTGCCTGCATGATGGACCTAAGGAGGTACCCACTGGATGAACAAAACTGCACCTTGGAAATTG
AGAGCTATGGATACACAACTGATGACATTGAATTTTACTGGCGTGGCGATGATAATGCAGTAAC
AGGAGTAACGAAAATTGAACTTCCACAGTTCTCTATTGTAGATTACAAACTTATCACCAAGAAG
GTTGTTTTTTCCACAGGTTCCTATCCCAGGTTATCCCTCAGCTTTAAGCTTAAGAGAAACATTG
GCTACTTTATCCTGCAAACATACATGCCTTCCATCCTGATTACCATCCTCTCCTGGGTCTCCTT
CTGGATTAACTACGATGCTTCAGCTGCAAGGGTGGCATTAGGAATCACAACTGTCCTCACAATG
ACCACAATCAACACCCACCTCCGGGAAACTCTCCCTAAAATCCCCTATGTGAAGGCCATTGACA
TGTACCTGATGGGGTGCTTTGTTTTCGTTTTCATGGCCCTTCTGGAATATGCTTTAGTCAACTA
CATCTTCTTTGGGAGGGGGCCCCAACGCCAAAAGAAAGCAGCTGAGAAGGCTGCCAGTGCCAAC
AATGAGAAGATGCGCCTGGACGTCAACAAGATTTTTTATAAAGATATTAAACAAAATGGGACCC
AATATCGATCCTTGTGGGACCCTACTGGAAACCTCTCCCCAACTAGACGGACTACCAATTACGA
TTTCTCTCTGTATACGATGGACCCCCATGAGAACATCTTACTGAGCACTCTCGAGATAAAAAAT
GAAATGGCCACATCTGAGGCTGTGATGGGACTTGGAGACCCCAGAAGCACAATGCTAGCCTATG
ATGCCTCCAGCATTCAGTACCGGAAAGCCGGGTTGCCCAGACATAGTTTTGGCCGAAATGCTCT
GGAACGACATGTGGCACAAAAGAAAAGTCGCCTGAGGAGACGCGCCTCCCAACTGAAAATCACC
ATCCCTGACTTGACTGATGTCAATGCCATAGATCGGTGGTCCCGCATATTCTTCCCAGTGGTTT
TTTCCTTCTTCAACATCGTCTATTGGCTTTATTATGTGAACTAAAACATGGCCTGCCACTGGAA
GCAAGGACTAGATTCCTCCTCAAACCAGTTGTACAGCCTGATGTAGGACTTGGAAAACACATCA
ATCCAGGACAAAAGTGATGCTAAAATACCTTAGTTGCTGGCCTATCCTGTGGTCCATTTCATAC
CATTTGGGTTGCTTCTGCTAAGTAACGAAAACACTAAGGTCCTTGTGGTTTTCCAGTTAAAACG
CAAGTGATTTGTACACATGGTGGCAAGACAGCCTGAGTGCTCCATGTTGTCTGTTTAGTATGCA
GCCTACTCAGAGGGGAATAATTTGGAAGATATTCTTAGAAGACTCAATAGCATTGTCAGTCATT
GGTCATAACCAGATACTCCTCATCTTCCTTTTTAAGGTTGGCATGCTGTTGAGATGGCATTGTG
CTTATGAAACATTATCTGTAATGCCATGCAAACACATTACTTGAAGATGATCTATGCTTTTCTT
ACTAAGATGATAATGGTGTCATGGGAAGGTTATTCCCACTGGTTTCTAAAAGATTCTCTTGTGA
TTGGAGCAGGCTAGCGGAATCAAGACAGAGACTCAGGAAACTGATTTGGCCAGTCTCTTAGCTT
GAGCACAGAGGATCAACTATGATGTCTTTCATTTTGGCATTTAGATGAGGAGACTTCTGAACAT
TATTGTGCATGGTGGCCAACGAAATTTTTGCTAAACAGCTATTTCCTAGGTGGTTAAAGTAAGA
GTTAACACGAGCAGAGTAGAAAATCAGAAATGACGGTTGTAACAAAAATCAAGCAAGCAAGCAA
GCATGACCCTTATCAGTTCCACACAGCATCTGGTCTATACGTACTGTGTCTAGTGGCAAAGGGT
GAGTAAGAGAGATTGTTTTTCCAACATCACAAGCTTTTGACAGCATACCTAAAGAGGTTTTTAT
AGTTTAATCAAAGATAACCATGAAATACAAAAGTTAGAGAAATTAGAATAGTCTTAGATACTCA
GGTTAGATTCAGAGTCATTCAAATACACAAAAACA

hide sequence

RefSeq Acc Id:

XM_073010543 ⟹ XP_072866644

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
mChlSab1.0.hap1	23	20,845,007 - 21,104,668 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_008013400	(Get FASTA)	NCBI Sequence Viewer
	XP_008013403	(Get FASTA)	NCBI Sequence Viewer
	XP_072866644	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000006576.1

RefSeq Acc Id:	XP_008013403 ⟸ XM_008015212
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_008013400 ⟸ XM_008015209
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9RD87 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCSAP00000006576 ⟸ ENSCSAT00000008430

RefSeq Acc Id:	XP_072866644 ⟸ XM_073010543
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9RD87 (UniProtKB/TrEMBL)

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000010344	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000008430.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.58.390	UniProtKB/TrEMBL
	2.70.170.10	UniProtKB/TrEMBL
InterPro	GABAA/Glycine_rcpt	UniProtKB/TrEMBL
	GABAAb_rcpt	UniProtKB/TrEMBL
	Neur_chan_lig-bd	UniProtKB/TrEMBL
	Neur_chan_lig-bd_sf	UniProtKB/TrEMBL
	Neur_channel	UniProtKB/TrEMBL
	Neuro-gated_channel_TM_sf	UniProtKB/TrEMBL
	Neuro_actylchol_rec	UniProtKB/TrEMBL
	Neurotrans-gated_channel_TM	UniProtKB/TrEMBL
	Neurotransmitter_ion_chnl_CS	UniProtKB/TrEMBL
KEGG Report	csab:103244912	UniProtKB/TrEMBL
NCBI Gene	GABRB2	ENTREZGENE
PANTHER	PTHR18945	UniProtKB/TrEMBL
Pfam	Neur_chan_LBD	UniProtKB/TrEMBL
	Neur_chan_memb	UniProtKB/TrEMBL
PRINTS	GABAARBETA	UniProtKB/TrEMBL
	GABAARECEPTR	UniProtKB/TrEMBL
	NRIONCHANNEL	UniProtKB/TrEMBL
PROSITE	NEUROTR_ION_CHANNEL	UniProtKB/TrEMBL
Superfamily-SCOP	SSF63712	UniProtKB/TrEMBL
	SSF90112	UniProtKB/TrEMBL
UniProt	A0A0D9RD87	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

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