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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:abnormal thyroid gland development
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Accession:MP:0003421 term browser browse the term
Definition:failure or abnormality in the formation of the thyroid gland during organogenesis
Synonyms:related_synonym: abnormal thyroid development


show annotations for term's descendants           Sort by:
abnormal thyroid gland development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crkl v-crk avian sarcoma virus CT10 oncogene homolog-like IAGP MGI PMID:11242111 NCBI chr16:17,269,849...17,305,304
Ensembl chr16:17,269,851...17,305,298 		JBrowse link
G Foxe1 forkhead box E1 IAGP MGI PMID:9697704 PMID:15581879 NCBI chr 4:46,343,644...46,345,774
Ensembl chr 4:46,343,609...46,346,412 		JBrowse link
G Hhex hematopoietically expressed homeobox IAGP MGI PMID:10804184 PMID:15459110 PMID:15581879 NCBI chr19:37,423,289...37,429,179
Ensembl chr19:37,423,258...37,429,179 		JBrowse link
G Hoxa5 homeobox A5 IAGP MGI PMID:12815622 NCBI chr 6:52,178,768...52,181,437
Ensembl chr 6:52,178,734...52,181,567 		JBrowse link
G Nkx2-1 NK2 homeobox 1 IAGP MGI PMID:10401665 PMID:21345181 NCBI chr12:56,578,741...56,583,570
Ensembl chr12:56,578,743...56,583,693 		JBrowse link
G Pax8 paired box 8 IAGP MGI PMID:9590297 NCBI chr 2:24,310,563...24,365,611
Ensembl chr 2:24,310,572...24,365,611 		JBrowse link
G Tpo thyroid peroxidase IAGP MGI PMID:24297261 NCBI chr12:30,104,658...30,182,983
Ensembl chr12:30,104,658...30,182,623 		JBrowse link
abnormal thyroid diverticulum morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax8 paired box 8 IAGP MGI PMID:9590297 NCBI chr 2:24,310,563...24,365,611
Ensembl chr 2:24,310,572...24,365,611 		JBrowse link
abnormal ultimobranchial body morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxa3 homeobox A3 IAGP MGI PMID:9520319 PMID:20498049 NCBI chr 6:52,146,039...52,190,316
Ensembl chr 6:52,146,042...52,190,316 		JBrowse link
G Hoxb3 homeobox B3 IAGP MGI PMID:9520319 NCBI chr11:96,197,927...96,238,756
Ensembl chr11:96,214,152...96,238,756 		JBrowse link
G Hoxd3 homeobox D3 IAGP MGI PMID:9520319 NCBI chr 2:74,542,337...74,578,615
Ensembl chr 2:74,542,271...74,578,786 		JBrowse link
G Ripply3 ripply transcriptional repressor 3 IAGP MGI PMID:21177346 NCBI chr16:94,129,281...94,137,794
Ensembl chr16:94,129,279...94,137,794 		JBrowse link
absent ultimobranchial body term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxa3 homeobox A3 IAGP MGI PMID:9520319 NCBI chr 6:52,146,039...52,190,316
Ensembl chr 6:52,146,042...52,190,316 		JBrowse link
G Hoxb3 homeobox B3 IAGP MGI PMID:9520319 NCBI chr11:96,197,927...96,238,756
Ensembl chr11:96,214,152...96,238,756 		JBrowse link
G Pax3 paired box 3 IAGP MGI PMID:2619088 NCBI chr 1:78,077,904...78,173,773
Ensembl chr 1:78,077,904...78,173,771 		JBrowse link
G Pax9 paired box 9 IAGP MGI PMID:9732271 NCBI chr12:56,738,478...56,759,609
Ensembl chr12:56,738,552...56,759,607 		JBrowse link
G Tbx1 T-box 1 IAGP MGI PMID:15190012 NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421 		JBrowse link
persistent ultimobranchial bodies term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eya1 EYA transcriptional coactivator and phosphatase 1 IAGP MGI PMID:12070080 NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459 		JBrowse link
G Hoxa3 homeobox A3 IAGP MGI PMID:9520319 NCBI chr 6:52,146,039...52,190,316
Ensembl chr 6:52,146,042...52,190,316 		JBrowse link
G Hoxb3 homeobox B3 IAGP MGI PMID:9520319 NCBI chr11:96,197,927...96,238,756
Ensembl chr11:96,214,152...96,238,756 		JBrowse link
G Hoxd3 homeobox D3 IAGP MGI PMID:9520319 NCBI chr 2:74,542,337...74,578,615
Ensembl chr 2:74,542,271...74,578,786 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 16883
    endocrine/exocrine gland phenotype 3438
      abnormal gland morphology 3197
        abnormal gland development 327
          abnormal thyroid gland development 15
            abnormal thyroglossal duct morphology 0
            abnormal thyroid diverticulum morphology 1
            abnormal ultimobranchial body morphology + 8
Path 2
Term Annotations click to browse term
  mammalian phenotype 16883
    endocrine/exocrine gland phenotype 3438
      abnormal gland morphology 3197
        abnormal endocrine gland morphology 1348
          abnormal thyroid gland morphology 106
            abnormal thyroid gland development 15
              abnormal thyroglossal duct morphology 0
              abnormal thyroid diverticulum morphology 1
              abnormal ultimobranchial body morphology + 8
paths to the root