Pax9 (paired box 9) - Rat Genome Database

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Gene: Pax9 (paired box 9) Mus musculus
Analyze
Symbol: Pax9
Name: paired box 9
RGD ID: 1557350
MGI Page MGI
Description: Enables DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Involved in positive regulation of transcription by RNA polymerase II. Acts upstream of or within several processes, including face morphogenesis; odontogenesis; and regulation of odontogenesis. Predicted to be located in nucleus. Predicted to be part of transcription regulator complex. Is expressed in several structures, including alimentary system; branchial arch; embryo mesenchyme; limb; and nose. Used to study tooth agenesis. Human ortholog(s) of this gene implicated in tooth agenesis. Orthologous to human PAX9 (paired box 9).
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: paired box gene 9; paired box protein Pax-9; Pax; Pax-9
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391256,738,478 - 56,759,609 (+)NCBIGRCm39mm39
GRCm39 Ensembl1256,738,552 - 56,759,607 (+)Ensembl
GRCm381256,691,693 - 56,712,824 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1256,691,767 - 56,712,822 (+)EnsemblGRCm38mm10GRCm38
MGSCv371257,796,626 - 57,812,217 (+)NCBIGRCm37mm9NCBIm37
MGSCv361257,613,651 - 57,629,242 (+)NCBImm8
Celera1257,861,482 - 57,877,076 (+)NCBICelera
Cytogenetic Map12C1NCBI
cM Map1224.53NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal ameloblast morphology  (IAGP)
abnormal craniofacial bone morphology  (IAGP)
abnormal cranium morphology  (IAGP)
abnormal dentin development  (IAGP)
abnormal dentin morphology  (IAGP)
abnormal hypaxial muscle morphology  (IAGP)
abnormal laryngeal cartilage morphology  (IAGP)
abnormal limb development  (IAGP)
abnormal lower incisor morphology  (IAGP)
abnormal mandible morphology  (IAGP)
abnormal maxillary shelf morphology  (IAGP)
abnormal molar morphology  (IAGP)
abnormal palatal shelf elevation  (IAGP)
abnormal palatine bone horizontal plate morphology  (IAGP)
abnormal pharyngeal pouch morphology  (IAGP)
abnormal pterygoid process morphology  (IAGP)
abnormal Reichert's cartilage morphology  (IAGP)
abnormal secondary palate development  (IAGP)
abnormal tendon morphology  (IAGP)
abnormal thymus lobule morphology  (IAGP)
abnormal thyroid cartilage morphology  (IAGP)
abnormal tooth attrition  (IAGP)
abnormal tooth development  (IAGP)
abnormal tooth morphology  (IAGP)
abnormal tympanic ring morphology  (IAGP)
absent alveolar process  (IAGP)
absent enamel  (IAGP)
absent incisors  (IAGP)
absent lower incisors  (IAGP)
absent mandibular coronoid process  (IAGP)
absent maxillary shelf  (IAGP)
absent molars  (IAGP)
absent palatine bone horizontal plate  (IAGP)
absent parathyroid glands  (IAGP)
absent premaxilla  (IAGP)
absent Reichert cartilage  (IAGP)
absent teeth  (IAGP)
absent ultimobranchial body  (IAGP)
aphagia  (IAGP)
arrest of tooth development  (IAGP)
athymia  (IAGP)
cleft secondary palate  (IAGP)
decreased body size  (IAGP)
decreased molar number  (IAGP)
decreased tooth number  (IAGP)
decreased tympanic ring size  (IAGP)
distended abdomen  (IAGP)
failure of palatal shelf elevation  (IAGP)
failure of tooth eruption  (IAGP)
growth retardation of molars  (IAGP)
neonatal lethality, complete penetrance  (IAGP)
no abnormal phenotype detected  (IAGP)
palatal shelves fail to meet at midline  (IAGP)
polydactyly  (IAGP)
polysyndactyly  (IAGP)
postnatal lethality, incomplete penetrance  (IAGP)
preaxial polydactyly  (IAGP)
respiratory distress  (IAGP)
small mandible  (IAGP)
References

Additional References at PubMed
PMID:7649395   PMID:7883790   PMID:7885472   PMID:7894157   PMID:7981748   PMID:8358169   PMID:8565855   PMID:8955271   PMID:9021154   PMID:9109488   PMID:9244299   PMID:9541201  
PMID:9664688   PMID:9690472   PMID:9716414   PMID:9729491   PMID:9732271   PMID:9876178   PMID:10098408   PMID:10197584   PMID:10349636   PMID:10364424   PMID:10415326   PMID:10556064  
PMID:10601039   PMID:10733590   PMID:10804168   PMID:10804169   PMID:10886375   PMID:10906448   PMID:11003693   PMID:11042159   PMID:11044393   PMID:11076861   PMID:11217851   PMID:11252173  
PMID:11390666   PMID:11489975   PMID:11641221   PMID:11668679   PMID:11714685   PMID:11731698   PMID:11932925   PMID:12070080   PMID:12141427   PMID:12223416   PMID:12413903   PMID:12435353  
PMID:12435361   PMID:12464426   PMID:12466851   PMID:12477932   PMID:12490554   PMID:12702665   PMID:12810603   PMID:12828987   PMID:12925591   PMID:14516692   PMID:14597572   PMID:14602680  
PMID:14607846   PMID:14623826   PMID:14745966   PMID:14960276   PMID:14960495   PMID:15024065   PMID:15107405   PMID:15136142   PMID:15155583   PMID:15175245   PMID:15454262   PMID:15469978  
PMID:15489334   PMID:15520281   PMID:15572143   PMID:15618518   PMID:15716346   PMID:15721141   PMID:16093716   PMID:16094489   PMID:16109395   PMID:16141072   PMID:16141073   PMID:16141225  
PMID:16169709   PMID:16236760   PMID:16387292   PMID:16492970   PMID:16524929   PMID:16530750   PMID:16651263   PMID:16824508   PMID:16884697   PMID:16960803   PMID:17359303   PMID:17376812  
PMID:17382312   PMID:17394220   PMID:17477400   PMID:17537793   PMID:17572911   PMID:17588959   PMID:17610273   PMID:17764670   PMID:17951031   PMID:17964566   PMID:18022614   PMID:18265010  
PMID:18287559   PMID:18572160   PMID:18594453   PMID:18634775   PMID:18691704   PMID:18692041   PMID:18948418   PMID:19103193   PMID:19235731   PMID:19248778   PMID:19304890   PMID:19334287  
PMID:19422820   PMID:19429910   PMID:19520072   PMID:19591819   PMID:19631205   PMID:19648291   PMID:19769959   PMID:19777594   PMID:19782673   PMID:19783740   PMID:20059953   PMID:20123092  
PMID:20211142   PMID:20412779   PMID:20589901   PMID:20652258   PMID:20685737   PMID:20883686   PMID:21034733   PMID:21177346   PMID:21185278   PMID:21267068   PMID:21303853   PMID:21384471  
PMID:21420399   PMID:21465616   PMID:21677750   PMID:21821669   PMID:21873635   PMID:21998026   PMID:22228095   PMID:22234613   PMID:22371266   PMID:22465667   PMID:22629441   PMID:22753148  
PMID:22841643   PMID:22983563   PMID:22988430   PMID:23315474   PMID:23377878   PMID:23460641   PMID:24068957   PMID:24146773   PMID:24173808   PMID:24415953   PMID:24433583   PMID:24642684  
PMID:24650709   PMID:24726282   PMID:24952961   PMID:25299669   PMID:25356765   PMID:25516972   PMID:25617721   PMID:25715693   PMID:25760946   PMID:25800090   PMID:25997579   PMID:26001200  
PMID:26136503   PMID:26238476   PMID:26959361   PMID:26980469   PMID:27287879   PMID:27329940   PMID:27341756   PMID:27352137   PMID:27381226   PMID:27381449   PMID:27405641   PMID:27680507  
PMID:28011632   PMID:28589954   PMID:28692808   PMID:28893947   PMID:29055049   PMID:29155305   PMID:29273440   PMID:29729398   PMID:29866044   PMID:30071041   PMID:31226309   PMID:31269445  
PMID:31412026   PMID:31427537   PMID:31444215   PMID:31765609   PMID:31776260   PMID:31896583   PMID:32243674   PMID:32390226   PMID:32467233   PMID:32634424   PMID:32866472   PMID:33298461  


Genomics

Comparative Map Data
Pax9
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391256,738,478 - 56,759,609 (+)NCBIGRCm39mm39
GRCm39 Ensembl1256,738,552 - 56,759,607 (+)Ensembl
GRCm381256,691,693 - 56,712,824 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1256,691,767 - 56,712,822 (+)EnsemblGRCm38mm10GRCm38
MGSCv371257,796,626 - 57,812,217 (+)NCBIGRCm37mm9NCBIm37
MGSCv361257,613,651 - 57,629,242 (+)NCBImm8
Celera1257,861,482 - 57,877,076 (+)NCBICelera
Cytogenetic Map12C1NCBI
cM Map1224.53NCBI
PAX9
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1436,657,568 - 36,679,362 (+)EnsemblGRCh38hg38GRCh38
GRCh381436,657,568 - 36,679,362 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371437,126,773 - 37,148,567 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361436,196,533 - 36,216,763 (+)NCBINCBI36hg18NCBI36
Build 341436,200,655 - 36,215,621NCBI
Celera1416,990,297 - 17,010,560 (+)NCBI
Cytogenetic Map14q13.3NCBI
HuRef1417,241,127 - 17,261,385 (+)NCBIHuRef
CHM1_11437,125,895 - 37,146,158 (+)NCBICHM1_1
Pax9
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2674,186,749 - 74,203,508 (+)NCBI
Rnor_6.0 Ensembl677,608,624 - 77,621,719 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0677,607,705 - 77,624,453 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0687,133,943 - 87,150,691 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4677,107,768 - 77,124,520 (+)NCBIRGSC3.4rn4RGSC3.4
Celera672,993,727 - 73,010,469 (+)NCBICelera
Cytogenetic Map6q23NCBI
Pax9
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540924,424,343 - 24,444,040 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540924,401,599 - 24,443,687 (-)NCBIChiLan1.0ChiLan1.0
PAX9
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11435,771,454 - 35,791,697 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1435,771,454 - 35,791,697 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01417,114,975 - 17,431,786 (+)NCBIMhudiblu_PPA_v0panPan3
PAX9
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1815,221,852 - 15,239,629 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl815,221,730 - 15,239,099 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha815,017,315 - 15,039,336 (+)NCBI
ROS_Cfam_1.0815,329,659 - 15,351,686 (+)NCBI
UMICH_Zoey_3.1815,027,510 - 15,049,518 (+)NCBI
UNSW_CanFamBas_1.0815,094,578 - 15,116,598 (+)NCBI
UU_Cfam_GSD_1.0815,384,554 - 15,406,581 (+)NCBI
Pax9
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864047,148,014 - 47,167,288 (+)NCBI
SpeTri2.0NW_00493649410,657,902 - 10,673,176 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PAX9
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl763,324,710 - 63,346,310 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1763,324,709 - 63,346,326 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2768,235,727 - 68,254,634 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PAX9
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12413,454,839 - 13,470,564 (+)NCBI
ChlSab1.1 Ensembl2413,455,589 - 13,473,505 (+)Ensembl
Vero_WHO_p1.0NW_0236660532,454,784 - 2,471,998 (+)NCBI
Pax9
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624838129,725 - 147,572 (-)NCBI

Position Markers
BB158148  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381256,712,549 - 56,712,644UniSTSGRCm38
MGSCv371257,813,536 - 57,813,631UniSTSGRCm37
Celera1257,878,395 - 57,878,490UniSTS
Cytogenetic Map12C1UniSTS
cM Map1226.0UniSTS
Whitehead/MRC_RH12578.3UniSTS
X84000  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381256,710,609 - 56,710,739UniSTSGRCm38
MGSCv371257,811,596 - 57,811,726UniSTSGRCm37
Celera1257,876,455 - 57,876,585UniSTS
Cytogenetic Map12C1UniSTS
cM Map1226.0UniSTS
Whitehead/MRC_RH12579.51UniSTS
UniSTS:225170  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381256,710,505 - 56,710,667UniSTSGRCm38
MGSCv371257,811,492 - 57,811,654UniSTSGRCm37
Celera1257,876,351 - 57,876,513UniSTS
Cytogenetic Map12C1UniSTS
cM Map1226.0UniSTS
PMC317134P1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381256,695,683 - 56,696,600UniSTSGRCm38
MGSCv371257,796,670 - 57,797,587UniSTSGRCm37
Celera1257,861,526 - 57,862,443UniSTS
Cytogenetic Map12C1UniSTS
cM Map1226.0UniSTS
D10Bir5  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map2G2UniSTS
Cytogenetic Map12C1UniSTS
cM Map641.0UniSTS
cM Map236.0UniSTS
cM Map1555.1UniSTS
cM Map1438.0UniSTS
cM Map1533.2UniSTS
cM Map1024.0UniSTS
cM Map924.0UniSTS
cM Map840.0UniSTS
cM Map91.0UniSTS
cM Map583.0UniSTS
cM Map551.0UniSTS
cM Map259.0UniSTS
cM Map178.8UniSTS
cM Map142.5UniSTS
cM Map135.0UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142234Tmc1m3_mTmc1 modifier 3 (mouse)Not determined12536844076984429Mouse
27226753Femd7_mfemur midshaft diameter 7, 10 week (mouse)12950000084100000Mouse
13207568Tcq14_mtotal cholesterol QTL 14 (mouse)121161000097210000Mouse
1558978Cplaq10_mcircadian period of locomotor activity 10 (mouse)Not determined121529102578993590Mouse
1301574Lmblgq5_mlimb length QTL 5 (mouse)Not determined121754644680910109Mouse
1300636Gct2_mgranulosa cell tumorigenesis 2 (mouse)Not determined122911390263114101Mouse
1301989Hdlq18_mHDL QTL 18 (mouse)Not determined122911390263114101Mouse
4141843Moen3_mmodifier of engrailed QTL 3 (mouse)Not determined122975480163754950Mouse
14747008Mancz10_mmandible centroid size 10 (mouse)122981673963816739Mouse
10402492Dipa8_mdrug induced psychomotor activation 8 (mouse)Not determined123488708968887236Mouse
1300818Bbaa10_mB.burgdorferi-associated arthritis 10 (mouse)Not determined123504100565464245Mouse
4142002Tbqt3_mtibia bone quality traits 3 (mouse)Not determined1235235497109969809Mouse
1357479Splwt1_mspleen weight 1 (mouse)Not determined124164639290920752Mouse
1357757Lnopy2_mlens opacity 2 (mouse)Not determined125279985286800022Mouse
1357749Vtbt13_mvertebral trabecular bone trait 13 (mouse)Not determined125308522887085371Mouse
12904004Opfaq11_mopen field activity QTL 11 (mouse)125310884157229970Mouse
12832727Ahrq1_mairway hyperresponsiveness QTL 1 (mouse)125464912582619165Mouse
12903999Opfaq8_mopen field activity QTL 8 (mouse)125486086857823799Mouse
4140993Tglq2b_mtriglyceride QTL 2b (mouse)Not determined125529146189291675Mouse
9850127Tglq6_mtriglyceride QTL6 (mouse)Not determined125529146189291675Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2095
Count of miRNA genes:585
Interacting mature miRNAs:788
Transcripts:ENSMUST00000001538, ENSMUST00000152848, ENSMUST00000153250
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000001538   ⟹   ENSMUSP00000001538
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1256,695,639 - 56,712,822 (+)Ensembl
RefSeq Acc Id: ENSMUST00000152848
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1256,695,729 - 56,710,346 (+)Ensembl
RefSeq Acc Id: ENSMUST00000153250   ⟹   ENSMUSP00000117928
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1256,691,767 - 56,712,707 (+)Ensembl
RefSeq Acc Id: NM_011041   ⟹   NP_035171
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391256,742,256 - 56,759,607 (+)NCBI
GRCm381256,695,471 - 56,712,822 (+)NCBI
MGSCv371257,796,626 - 57,812,217 (+)RGD
Celera1257,861,482 - 57,877,076 (+)RGD
cM Map12 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006515579   ⟹   XP_006515642
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391256,741,722 - 56,759,609 (+)NCBI
GRCm381256,694,937 - 56,712,824 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006515580   ⟹   XP_006515643
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391256,741,722 - 56,759,609 (+)NCBI
GRCm381256,694,937 - 56,712,824 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006515581   ⟹   XP_006515644
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391256,738,478 - 56,759,609 (+)NCBI
GRCm381256,691,693 - 56,712,824 (+)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_035171   ⟸   NM_011041
- UniProtKB: P47242 (UniProtKB/Swiss-Prot),   Q3V1K1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006515644   ⟸   XM_006515581
- Peptide Label: isoform X1
- UniProtKB: P47242 (UniProtKB/Swiss-Prot),   Q3V1K1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006515643   ⟸   XM_006515580
- Peptide Label: isoform X1
- UniProtKB: P47242 (UniProtKB/Swiss-Prot),   Q3V1K1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006515642   ⟸   XM_006515579
- Peptide Label: isoform X1
- UniProtKB: P47242 (UniProtKB/Swiss-Prot),   Q3V1K1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000001538   ⟸   ENSMUST00000001538
RefSeq Acc Id: ENSMUSP00000117928   ⟸   ENSMUST00000153250
Protein Domains
Paired

Promoters
RGD ID:6823254
Promoter ID:MM_KWN:11707
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lung
Transcripts:OTTMUST00000056158
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361257,792,336 - 57,792,836 (+)MPROMDB
RGD ID:6823250
Promoter ID:MM_KWN:11708
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Kidney,   Lung,   MEF_B4,   MEF_B6
Transcripts:NM_011041,   OTTMUST00000056159
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361257,796,746 - 57,798,152 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:97493 AgrOrtholog
Ensembl Genes ENSMUSG00000001497 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Protein ENSMUSP00000001538 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000117928 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000001538 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000153250 ENTREZGENE, UniProtKB/Swiss-Prot
Gene3D-CATH 1.10.10.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Homeobox-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PAIRED_DNA_bd_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Paired_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PAX9 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PAX_fam UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WH-like_DNA-bd_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:18511 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:97493 ENTREZGENE
NCBI Gene 18511 ENTREZGENE
PANTHER PTHR45636 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR45636:SF13 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam PAX UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Pax9 PhenoGen
PRINTS PAIREDBOX UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE PAIRED_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PAIRED_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART PAX UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF46689 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt P47242 ENTREZGENE, UniProtKB/Swiss-Prot
  Q3V1K1 ENTREZGENE, UniProtKB/TrEMBL
  Q8BS81_MOUSE UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-11-26 Pax9  paired box 9    paired box gene 9  Symbol and/or name change 5135510 APPROVED