Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:ATP-dependent chromatin remodeler activity
go back to main search page
Accession:GO:0140658 term browser browse the term
Definition:An activity, driven by ATP hydrolysis, that modulates the contacts between histones and DNA, resulting in a change in chromosome architecture within the nucleosomal array, leading to chromatin remodeling.
Synonyms:exact_synonym: ATP hydrolysis-dependent chromatin remodeler activity;   ATP-dependent chromatin remodeller activity;   ATPase-dependent chromatin remodeler activity
 related_synonym: ATP-dependent chromatin remodelling;   nucleosome-activated ATPase activity;   nucleosome-dependent ATPase activity
 alt_id: GO:0070615


show annotations for term's descendants           Sort by:
ATP-dependent chromatin remodeler activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid1a AT-rich interaction domain 1A enables IDA (PMID:23129809) MGI PMID:23129809 NCBI chr 4:133,406,319...133,484,682
Ensembl chr 4:133,406,319...133,484,080 		JBrowse link
G Atrx ATRX, chromatin remodeler enables IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr  X:104,841,221...104,972,978
Ensembl chr  X:104,841,221...104,973,009 		JBrowse link
G Cecr2 CECR2, histone acetyl-lysine reader enables ISO MGI GO_REF:0000008 NCBI chr 6:120,643,275...120,748,152
Ensembl chr 6:120,643,330...120,748,151 		JBrowse link
G Chd1 chromodomain helicase DNA binding protein 1 enables IBA GO_Central GO_REF:0000033 NCBI chr17:15,925,229...15,992,874
Ensembl chr17:15,925,229...15,992,872 		JBrowse link
G Chd1l chromodomain helicase DNA binding protein 1-like enables ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:97,468,056...97,517,538
Ensembl chr 3:97,468,058...97,517,519 		JBrowse link
G Chd2 chromodomain helicase DNA binding protein 2 enables IBA GO_Central GO_REF:0000033 NCBI chr 7:73,076,400...73,191,494
Ensembl chr 7:73,076,386...73,191,578 		JBrowse link
G Chd3 chromodomain helicase DNA binding protein 3 enables ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr11:69,234,099...69,260,325
Ensembl chr11:69,234,099...69,260,232 		JBrowse link
G Chd4 chromodomain helicase DNA binding protein 4 enables ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 6:125,073,144...125,107,554
Ensembl chr 6:125,072,944...125,107,554 		JBrowse link
G Chd5 chromodomain helicase DNA binding protein 5 enables IBA GO_Central GO_REF:0000033 NCBI chr 4:152,423,103...152,474,651
Ensembl chr 4:152,423,108...152,474,651 		JBrowse link
G Chd6 chromodomain helicase DNA binding protein 6 enables IBA GO_Central GO_REF:0000033 NCBI chr 2:160,788,898...160,951,006
Ensembl chr 2:160,788,898...160,950,995 		JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 enables IBA GO_Central GO_REF:0000033 NCBI chr 4:8,690,345...8,868,449
Ensembl chr 4:8,690,406...8,867,659 		JBrowse link
G Chd8 chromodomain helicase DNA binding protein 8 enables ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr14:52,435,608...52,495,499
Ensembl chr14:52,435,608...52,495,237 		JBrowse link
G Chd9 chromodomain helicase DNA binding protein 9 enables IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 8:91,554,930...91,781,144
Ensembl chr 8:91,554,980...91,781,144 		JBrowse link
G Ep400 E1A binding protein p400 enables IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 5:110,812,239...110,918,583
Ensembl chr 5:110,812,239...110,918,583 		JBrowse link
G Ercc6 excision repair cross-complementing rodent repair deficiency, complementation group 6 enables ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:32,235,248...32,302,947
Ensembl chr14:32,235,478...32,302,947 		JBrowse link
G Ercc6l excision repair cross-complementing rodent repair deficiency complementation group 6 like enables IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr  X:101,186,426...101,200,697
Ensembl chr  X:101,185,322...101,200,697 		JBrowse link
G Ercc6l2 excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2 enables IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr13:63,958,793...64,048,116
Ensembl chr13:63,963,054...64,048,116 		JBrowse link
G Hells helicase, lymphoid specific enables IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr19:38,913,282...38,958,914
Ensembl chr19:38,919,359...38,959,495 		JBrowse link
G Hltf helicase-like transcription factor enables IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 3:20,111,959...20,172,655
Ensembl chr 3:20,111,975...20,172,654 		JBrowse link
G Ino80 INO80 complex subunit enables IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 2:119,203,523...119,308,168
Ensembl chr 2:119,203,523...119,308,168 		JBrowse link
G Rad54l RAD54 like (S. cerevisiae) enables IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 4:115,951,458...115,980,875
Ensembl chr 4:115,951,461...115,980,887 		JBrowse link
G Rad54l2 RAD54 like 2 (S. cerevisiae) enables IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 9:106,565,279...106,666,412
Ensembl chr 9:106,565,281...106,666,393 		JBrowse link
G Shprh SNF2 histone linker PHD RING helicase enables IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr10:11,024,765...11,093,339
Ensembl chr10:11,025,171...11,093,339 		JBrowse link
G Smarca1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 enables
contributes_to		 ISO MGI GO_REF:0000008 NCBI chr  X:46,898,247...46,981,490
Ensembl chr  X:46,898,245...46,981,851 		JBrowse link
G Smarca2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 enables IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr19:26,582,578...26,755,721
Ensembl chr19:26,582,450...26,755,722 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 enables IDA (PMID:34910916) UniProt PMID:34910916 NCBI chr 9:21,527,377...21,615,526
Ensembl chr 9:21,527,465...21,615,526 		JBrowse link
G Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 enables ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:81,426,572...81,466,088
Ensembl chr 8:81,425,136...81,466,126 		JBrowse link
G Smarcad1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 enables ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:65,019,577...65,093,045
Ensembl chr 6:65,019,567...65,093,045 		JBrowse link
G Smarcal1 SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 enables IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 1:72,575,593...72,675,949
Ensembl chr 1:72,622,410...72,672,293 		JBrowse link
G Ttf2 transcription termination factor, RNA polymerase II enables IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 3:100,846,176...100,877,016
Ensembl chr 3:100,846,176...100,876,979 		JBrowse link
G Zranb3 zinc finger, RAN-binding domain containing 3 enables IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 1:127,881,916...128,030,799
Ensembl chr 1:127,881,921...128,030,784 		JBrowse link
ATP-dependent H2AZ histone chaperone activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vps72 vacuolar protein sorting 72 enables IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 3:95,018,353...95,030,362
Ensembl chr 3:95,018,333...95,030,362 		JBrowse link
ATP-dependent histone chaperone activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myd88 myeloid differentiation primary response gene 88 enables IMP (PMID:18319258) MGI PMID:18319258 NCBI chr 9:119,165,000...119,169,084
Ensembl chr 9:119,165,000...119,170,477 		JBrowse link
histone octamer slider activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rsf1 remodeling and spacing factor 1 enables ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:97,229,103...97,341,989
Ensembl chr 7:97,229,096...97,341,985 		JBrowse link
G Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 enables ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:81,426,572...81,466,088
Ensembl chr 8:81,425,136...81,466,126 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 28831
    ATP-dependent activity 586
      ATP-dependent activity, acting on DNA 118
        ATP-dependent chromatin remodeler activity 34
          ATP-dependent histone chaperone activity + 2
          histone octamer slider activity + 2
Path 2
Term Annotations click to browse term
  molecular_function 28831
    catalytic activity 5721
      catalytic activity, acting on a nucleic acid 614
        catalytic activity, acting on DNA 244
          ATP-dependent activity, acting on DNA 118
            ATP-dependent chromatin remodeler activity 34
              ATP-dependent histone chaperone activity + 2
              histone octamer slider activity + 2
paths to the root