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acetylcholine-gated channel complex - Ontology Report - Rat Genome Database

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ONTOLOGY REPORT - ANNOTATIONS

Term:acetylcholine-gated channel complex
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Accession:GO:0005892 term browser browse the term
Definition:A homo- or hetero-pentameric protein complex that forms a transmembrane channel through which ions may pass in response to acetylcholine binding.
Synonyms:exact_synonym: nicotinic acetylcholine-gated receptor-channel complex
 broad_synonym: nicotinic acetylcholine receptor

 Loading Annotations... 
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acetylcholine-gated channel complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrna1 cholinergic receptor nicotinic alpha 1 subunit part_of TAS
IDA
IBA
ISO
IEA 		GO_REF:0000033
PR:P02716 (PMID:8910344)
GO_REF:0000107 		GO_Central
RGD
Ensembl		 PMID:8910344 PMID:1702709 PMID:22461452 GO_REF:0000033 GO_REF:0000107, RGD:68734, RGD:8549758 NCBI chr 3:58,454,763...58,469,832
Ensembl chr 3:58,454,744...58,469,840 		JBrowse link
G Chrna2 cholinergic receptor nicotinic alpha 2 subunit part_of IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
(PMID:24467848), (PMID:8906617) 		GO_Central
Ensembl
RGD		 PMID:8906617 PMID:24467848 GO_REF:0000033 GO_REF:0000107 NCBI chr15:40,342,317...40,358,601
Ensembl chr15:40,342,317...40,358,601 		JBrowse link
G Chrna3 cholinergic receptor nicotinic alpha 3 subunit part_of TAS
IDA
IGI
IEA
IBA
ISO 		PMID:21540349
GO_REF:0000107
GO_REF:0000033
UniProtKB:Q3KP94 (PMID:17434683)
(PMID:11118490), (PMID:20881005), (PMID:31488329), (PMID:8906617) 		Ensembl
GO_Central
RGD		 PMID:8906617 PMID:11118490 PMID:17434683 PMID:20881005 PMID:31488329 More... GO_REF:0000033 GO_REF:0000107, RGD:625623, RGD:8549534, RGD:12790638 NCBI chr 8:55,401,668...55,415,165
Ensembl chr 8:55,401,702...55,415,165 		JBrowse link
G Chrna4 cholinergic receptor nicotinic alpha 4 subunit part_of TAS
IDA
IBA
ISO 		GO_REF:0000033
UniProtKB:Q3KP94 (PMID:12871652), (PMID:12944511), (PMID:17434683), (PMID:26276394)
PMID:9882698
PMID:22593584
(PMID:17132685), (PMID:20881005), (PMID:27698419), (PMID:29720657), (PMID:38454578), (PMID:8906617) 		GO_Central
RGD		 PMID:8906617 PMID:12871652 PMID:12944511 PMID:17132685 PMID:17434683 More... GO_REF:0000033, RGD:625623, RGD:2303190, RGD:8549520, RGD:8549534, RGD:596936194, RGD:596936208 NCBI chr 3:168,136,246...168,157,839
Ensembl chr 3:168,136,266...168,156,957 		JBrowse link
G Chrna5 cholinergic receptor nicotinic alpha 5 subunit part_of IDA
IEA
IBA
ISO 		GO_REF:0000107
GO_REF:0000033
PR:O70174|PR:Q8R4G9 (PMID:17434683)
(PMID:20881005) 		Ensembl
GO_Central
RGD		 PMID:17434683 PMID:20881005 PMID:20796176 GO_REF:0000033 GO_REF:0000107, RGD:8549534 NCBI chr 8:55,369,794...55,398,526
Ensembl chr 8:55,369,794...55,398,146 		JBrowse link
G Chrna6 cholinergic receptor nicotinic alpha 6 subunit part_of IEA
IBA
ISO 		GO_REF:0000107
GO_REF:0000033
(PMID:12944511)
(PMID:16835356) 		Ensembl
GO_Central
RGD		 PMID:12944511 PMID:16835356 GO_REF:0000033 GO_REF:0000107 NCBI chr16:64,697,741...64,704,441
Ensembl chr16:64,697,741...64,704,441 		JBrowse link
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit part_of TAS
IDA
IBA
ISO 		PMID:21540349
GO_REF:0000033
(PMID:38161283), (PMID:8906617) 		GO_Central
RGD		 PMID:8906617 PMID:38161283 PMID:12069582 PMID:12645078 PMID:11259617 More... GO_REF:0000033, RGD:727702, RGD:704420, RGD:8549520, RGD:12790638 NCBI chr 1:116,711,559...116,837,269
Ensembl chr 1:116,714,711...116,837,240 		JBrowse link
G Chrna9 cholinergic receptor nicotinic alpha 9 subunit part_of IDA
ISO
IEA 		(PMID:25282151)
GO_REF:0000107 		RGD
Ensembl		 PMID:25282151 PMID:12401316 GO_REF:0000107, RGD:724744 NCBI chr14:42,235,218...42,241,939
Ensembl chr14:42,235,226...42,242,192 		JBrowse link
G Chrnb1 cholinergic receptor nicotinic beta 1 subunit part_of IDA
ISO
IEA
IBA 		(PMID:8872460)
GO_REF:0000107
GO_REF:0000033
(PMID:8798466) 		RGD
Ensembl
GO_Central		 PMID:8798466 PMID:8872460 PMID:22461452 GO_REF:0000033 GO_REF:0000107, RGD:8549758 NCBI chr10:54,501,096...54,516,418
Ensembl chr10:54,501,093...54,516,345 		JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit part_of IDA
IGI
IBA
ISO 		PMID:21540349
GO_REF:0000033
(PMID:12944511), (PMID:26276394)
(PMID:16835356), (PMID:17132685), (PMID:20881005), (PMID:24467848), (PMID:27698419), (PMID:29720657), (PMID:38161283), (PMID:38454578), (PMID:8906617) 		GO_Central
RGD		 PMID:8906617 PMID:12944511 PMID:16835356 PMID:17132685 PMID:20881005 More... GO_REF:0000033, RGD:727635, RGD:2303190, RGD:8549520, RGD:8549534, RGD:12790638 NCBI chr 2:175,181,402...175,189,619
Ensembl chr 2:175,181,402...175,189,619 		JBrowse link
G Chrnb3 cholinergic receptor nicotinic beta 3 subunit part_of TAS
IDA
IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
(PMID:11118490), (PMID:16835356) 		GO_Central
Ensembl
RGD		 PMID:11118490 PMID:16835356 PMID:2703489 PMID:9030613 GO_REF:0000033 GO_REF:0000107, RGD:724745, RGD:2303190 NCBI chr16:64,713,438...64,751,360
Ensembl chr16:64,714,169...64,751,360 		JBrowse link
G Chrnb4 cholinergic receptor nicotinic beta 4 subunit part_of TAS
IDA
IBA
ISO 		GO_REF:0000033
(PMID:11118490), (PMID:16835356), (PMID:20881005), (PMID:24467848), (PMID:31488329), (PMID:8906617) 		GO_Central
RGD		 PMID:8906617 PMID:11118490 PMID:16835356 PMID:20881005 PMID:24467848 More... GO_REF:0000033, RGD:724746, RGD:2303190, RGD:8549534 NCBI chr 8:55,417,583...55,437,027
Ensembl chr 8:55,418,313...55,437,027 		JBrowse link
G Chrnd cholinergic receptor nicotinic delta subunit part_of IDA
IBA
ISO
IEA 		GO_REF:0000033
PR:P04756 (PMID:8798466), (PMID:8910344)
GO_REF:0000107 		GO_Central
RGD
Ensembl		 PMID:8798466 PMID:8910344 PMID:22461452 GO_REF:0000033 GO_REF:0000107, RGD:8549758 NCBI chr 9:87,862,417...87,870,833
Ensembl chr 9:87,862,407...87,870,833 		JBrowse link
G Chrne cholinergic receptor nicotinic epsilon subunit part_of IDA
IBA 		GO_REF:0000033 GO_Central
RGD		 PMID:22461452 GO_REF:0000033, RGD:8549758 NCBI chr10:55,331,211...55,339,923
Ensembl chr10:55,331,212...55,335,530 		JBrowse link
G Chrng cholinergic receptor nicotinic gamma subunit part_of IDA
IBA
ISO 		GO_REF:0000033
(PMID:8798466) 		GO_Central
RGD		 PMID:8798466 PMID:22461452 GO_REF:0000033, RGD:8549758 NCBI chr 9:87,878,085...87,884,193
Ensembl chr 9:87,878,085...87,914,482 		JBrowse link
G Stxbp5 syntaxin binding protein 5 part_of IEA
ISO 		GO_REF:0000107
(PMID:12832401) 		Ensembl
RGD		 PMID:12832401 GO_REF:0000107 NCBI chr 1:4,182,489...4,335,290
Ensembl chr 1:4,185,529...4,335,101 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21350
    protein-containing complex 6834
      receptor complex 490
        plasma membrane signaling receptor complex 270
          acetylcholine-gated channel complex 16
Path 2
Term Annotations click to browse term
  cellular_component 21350
    cellular anatomical structure 21054
      membrane 10504
        membrane protein complex 1452
          transmembrane transporter complex 551
            monoatomic ion channel complex 372
              acetylcholine-gated channel complex 16
paths to the root