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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:Teratozoospermia
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Accession:DOID:9002321 term browser browse the term
Definition:Presence of spermatozoa with abnormal morphology over 85 % in sperm.
Synonyms:exact_synonym: abnormal spermatozoa;   abnormal spermatozoas;   teratospermia;   teratospermias;   teratozoospermias
 primary_id: MESH:D000072660
 xref: EFO:0002625


show annotations for term's descendants           Sort by:
Teratozoospermia term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg5 autophagy related 5 ISO CTD Direct Evidence: marker/mechanism CTD PMID:37506864 NCBI chr20:47,798,217...47,889,216
Ensembl chr20:47,798,290...47,889,209 		JBrowse link
G Fam83f family with sequence similarity 83, member F ISO ClinVar Annotator: match by term: Teratozoospermia ClinVar PMID:25741868 NCBI chr 7:112,211,164...112,240,454
Ensembl chr 7:112,211,164...112,240,452 		JBrowse link
G Nectin2 nectin cell adhesion molecule 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28689229 NCBI chr 1:79,372,123...79,407,379
Ensembl chr 1:79,372,119...79,407,360 		JBrowse link
G Nectin3 nectin cell adhesion molecule 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28689229 NCBI chr11:54,362,712...54,469,351
Ensembl chr11:54,364,487...54,462,519 		JBrowse link
G Nos3 nitric oxide synthase 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29983398 NCBI chr 4:10,793,834...10,814,170
Ensembl chr 4:10,793,834...10,814,166 		JBrowse link
G Ythdc2 YTH N6-methyladenosine RNA binding protein C2 ISO CTD Direct Evidence: therapeutic CTD PMID:34822792 NCBI chr18:37,266,559...37,331,681
Ensembl chr18:37,265,836...37,331,023 		JBrowse link
male infertility due to globozoospermia term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hsp90b1 heat shock protein 90 beta family member 1 ISS MouseDO NCBI chr 7:21,110,431...21,124,762
Ensembl chr 7:21,110,457...21,124,788 		JBrowse link
G Spata16 spermatogenesis associated 16 ISO ClinVar Annotator: match by term: Globozoospermia ClinVar PMID:17847006 PMID:24265589 PMID:25741868 PMID:28492532 PMID:29065458 NCBI chr 2:109,485,287...109,865,665
Ensembl chr 2:109,485,274...109,865,659 		JBrowse link
oligoasthenoteratozoospermia term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agfg1 ArfGAP with FG repeats 1 ISS MouseDO NCBI chr 9:84,124,845...84,182,615
Ensembl chr 9:84,125,120...84,178,128 		JBrowse link
G Ccdc157 coiled-coil domain containing 157 ISS MouseDO NCBI chr14:79,012,433...79,031,458
Ensembl chr14:79,014,925...79,031,671 		JBrowse link
G Cfap58 cilia and flagella associated protein 58 ISS MouseDO NCBI chr 1:246,802,691...246,911,363
Ensembl chr 1:246,802,665...246,911,374 		JBrowse link
G Cfap61 cilia and flagella associated protein 61 ISS MouseDO NCBI chr 3:133,354,400...133,633,310
Ensembl chr 3:133,354,197...133,633,320 		JBrowse link
G Cfap70 cilia and flagella associated protein 70 ISS MouseDO NCBI chr15:3,852,381...3,918,036
Ensembl chr15:3,852,509...3,918,014 		JBrowse link
G Mlx MAX dimerization protein MLX ISS MouseDO NCBI chr10:86,019,216...86,024,326
Ensembl chr10:86,019,588...86,032,350 		JBrowse link
G Poc1b POC1 centriolar protein B ISS MouseDO NCBI chr 7:33,924,112...34,025,908
Ensembl chr 7:33,924,189...34,025,903 		JBrowse link
G Ppp4c protein phosphatase 4, catalytic subunit ISS MouseDO NCBI chr 1:181,392,899...181,399,703
Ensembl chr 1:181,392,923...181,399,659 		JBrowse link
G Spata20 spermatogenesis associated 20 ISS MouseDO NCBI chr10:79,427,525...79,435,472
Ensembl chr10:79,427,528...79,434,368 		JBrowse link
spermatogenic failure 6 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spata16 spermatogenesis associated 16 ISO CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Globozoospermia | ClinVar Annotator: match by term: Spermatogenic failure 6		 OMIM
CTD
ClinVar		 PMID:17847006 PMID:24265589 PMID:25741868 PMID:28492532 PMID:29065458 NCBI chr 2:109,485,287...109,865,665
Ensembl chr 2:109,485,274...109,865,659 		JBrowse link
spermatogenic failure 9 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpy19l2 dpy-19 like 2 ISO CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Spermatogenic failure 9		 OMIM
CTD
ClinVar		 PMID:15533374 PMID:21397063 PMID:21397064 PMID:22627659 PMID:22653751 More... NCBI chr 8:23,062,592...23,181,817
Ensembl chr 8:23,063,115...23,181,798 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 18970
    disease of anatomical entity 18265
      reproductive system disease 3023
        male reproductive system disease 2012
          male infertility 311
            Teratozoospermia 18
              male infertility due to globozoospermia + 3
              oligoasthenoteratozoospermia 9
Path 2
Term Annotations click to browse term
  disease 18970
    disease of anatomical entity 18265
      Urogenital Diseases 5249
        Female Urogenital Diseases and Pregnancy Complications 2467
          Female Urogenital Diseases 2016
            female reproductive system disease 2013
              infertility 402
                male infertility 311
                  Teratozoospermia 18
                    male infertility due to globozoospermia + 3
                    oligoasthenoteratozoospermia 9
paths to the root