Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Ppp4c (protein phosphatase 4, catalytic subunit) Rattus norvegicus
Analyze
Symbol: Ppp4c
Name: protein phosphatase 4, catalytic subunit
Description: Exhibits lamin binding activity and phosphatase activity. Involved in cellular response to interleukin-1 and dephosphorylation. Localizes to nucleus. Orthologous to human PPP4C (protein phosphatase 4 catalytic subunit); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; ammonium chloride; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: MGC94490; pp4; PP4C; Ppx; protein phosphatase 4 (formerly X), catalytic subunit; serine/threonine-protein phosphatase 4 catalytic subunit
Orthologs:
Homo sapiens (human) : PPP4C (protein phosphatase 4 catalytic subunit)  HGNC  Alliance
Mus musculus (house mouse) : Ppp4c (protein phosphatase 4, catalytic subunit)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ppp4c (protein phosphatase 4 catalytic subunit)
Pan paniscus (bonobo/pygmy chimpanzee) : PPP4C (protein phosphatase 4 catalytic subunit)
Canis lupus familiaris (dog) : PPP4C (protein phosphatase 4 catalytic subunit)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ppp4c (protein phosphatase 4 catalytic subunit)
Sus scrofa (pig) : PPP4C (protein phosphatase 4 catalytic subunit)
Chlorocebus sabaeus (African green monkey) : PPP4C (protein phosphatase 4 catalytic subunit)
Heterocephalus glaber (naked mole-rat) : Ppp4c (protein phosphatase 4 catalytic subunit)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01198,219,012 - 198,225,775 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1198,219,054 - 198,225,580 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01205,198,880 - 205,205,643 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41185,961,286 - 185,967,851 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11186,111,715 - 186,111,884 (-)NCBI
Celera1179,048,421 - 179,054,986 (-)NCBICelera
Cytogenetic Map1q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Ppp4c
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 621225
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.