| 1332440 | Shroom1 | shroom family member 1 | Enables actin filament binding activity and myosin II binding activity. Involved in actin filament bundle assembly and cell morphogenesis. Predicted to be located in cytoplasm and microtubule. Predicted to be active in several cellular components, including adherens junction; apical junction complex ; and apical plasma membrane. Is expressed in several structures, including alimentary system; heart; integumental system; nervous system; and sensory organ. Orthologous to human SHROOM1 (shroom family member 1). [provided by Alliance of Genome Resources, Jul 2025] | 11 | 53347904 | 53358593 | Mouse | 80 | symbol , PhenoGen , name , description , old_gene_symbol | gene, protein-coding, VALIDATED [RefSeq] |
| 1614985 | Shroom2 | shroom family member 2 | Enables actin filament binding activity; beta-catenin binding activity; and protein domain specific binding activity. Involved in cell migration and melanosome organization. Acts upstream of or within cell-cell junction maintenance and negative regulation of actin filament depolymerization. Located in several cellular components, including adherens junction; apical plasma membrane; and bicellular tight junction. Colocalizes with cortical actin cytoskeleton. Is expressed in several structures, including blood vessel; central nervous system; epithelium; inner ear; and retina inner plexiform layer. Orthologous to human SHROOM2 (shroom family member 2). [provided by Alliance of Genome Resources, Jul 2025] | X | 151392505 | 151553784 | Mouse | 133 | symbol , PhenoGen , name , description , old_gene_symbol | gene, protein-coding, VALIDATED [RefSeq] |
| 1557949 | Shroom3 | shroom family member 3 | Enables actin binding activity. Acts upstream of or within several processes, including columnar/cuboidal epithelial cell development; neural tube closure; and regulation of cell shape. Located in several cellular components, including adherens junction; apical junction complex; and apical plasma me mbrane. Is expressed in several structures, including central nervous system; gut; heart; paraxial mesenchyme; and sensory organ. Orthologous to human SHROOM3 (shroom family member 3). [provided by Alliance of Genome Resources, Jul 2025] | 5 | 92831294 | 93113618 | Mouse | 155 | symbol , PhenoGen , name , description , old_gene_symbol | gene, protein-coding, VALIDATED [RefSeq] |
| 1620640 | Shroom4 | shroom family member 4 | Enables actin filament binding activity and myosin II binding activity. Acts upstream of or within actin filament organization. Located in several cellular components, including apical plasma membrane; basal plasma membrane; and stress fiber. Colocalizes with cortical actin cytoskeleton. Is expresse d in several structures, including brain; genitourinary system; heart; liver; and lung. Orthologous to human SHROOM4 (shroom family member 4). [provided by Alliance of Genome Resources, Jul 2025] | X | 6312012 | 6549508 | Mouse | 93 | symbol , PhenoGen , name , description , old_gene_symbol | gene, protein-coding, VALIDATED [RefSeq] |
| 2592 | Fabp6 | fatty acid binding protein 6 | ENCODES a protein that exhibits fatty acid binding; INVOLVED IN steroid metabolic process; PARTICIPATES IN eicosanoid signaling pathway via peroxisome proliferator-activated receptor gamma; FOUND IN cytoplasm (inferred); membrane (inferred); INTERACTS WITH 1,1,1-trichloro-2,2-bis(4-hydroxyphenyl)eth ane; ammonium chloride; bisphenol A | 10 | 28565054 | 28569727 | Rat | 94 | old_gene_name | gene, protein-coding, PROVISIONAL [RefSeq] |
| 14371180 | shrb | | | | | | Fly | | symbol | gene, null |
| 14388459 | Shroom | | | | | | Fly | | symbol | gene, null |
| 1308066 | Shroom1 | shroom family member 1 | ENCODES a protein that exhibits actin filament binding (ortholog); myosin II binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoskeleton (inferred); microtubule (inferred); INTERACTS WITH 17beta- estradiol; 17beta-estradiol 3-benzoate; 2,3,7,8-tetrachlorodibenzodioxine | 10 | 38121971 | 38134832 | Rat | 85 | symbol , PhenoGen , name | gene, protein-coding, MODEL [RefSeq] |
| 1605292 | SHROOM1 | shroom family member 1 | SHROOM family members play diverse roles in the development of the nervous system and other tissues (Hagens et al., 2006 [PubMed 16615870]).[supplied by OMIM, Mar 2008] | 5 | 132822141 | 132830647 | Human | 85 | symbol , COSMIC , name , description , Human Proteome Map | gene, protein-coding, VALIDATED [RefSeq] |
| 8804283 | Shroom1 | shroom family member 1 | ENCODES a protein that exhibits actin filament binding (ortholog); myosin II binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH COVID-19 (ortholog) | NW_004955408 | 4194296 | 4218616 | Chinchilla | 5 | symbol , name | gene, protein-coding, MODEL [RefSeq] |
| 11824533 | SHROOM1 | shroom family member 1 | ENCODES a protein that exhibits actin filament binding (inferred); myosin II binding (inferred); INVOLVED IN actin filament bundle assembly (inferred); actin filament organization (inferred); cell morphogenesis (inferred); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN adherens junction (inferred); a pical junction complex (inferred); apical plasma membrane (inferred) | 5 | 128239510 | 128248978 | Bonobo | 15 | symbol , name | gene, protein-coding, MODEL [RefSeq] |
| 12060975 | SHROOM1 | shroom family member 1 | ENCODES a protein that exhibits myosin II binding (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoskeleton (inferred); microtubule (inferred) | 11 | 21115103 | 21120934 | Dog | 14 | symbol , old_gene_name , name | gene, protein-coding, MODEL [RefSeq] |
| 12576585 | Shroom1 | shroom family member 1 | ENCODES a protein that exhibits actin binding (inferred); actin filament binding (inferred); myosin II binding (inferred); INVOLVED IN actin filament bundle assembly (inferred); actin filament organization (inferred); cell morphogenesis (inferred); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN adher ens junction (inferred); apical junction complex (inferred); apical plasma membrane (inferred) | NW_004936647 | 2371673 | 2385037 | Squirrel | 18 | symbol , old_gene_name , name | gene, protein-coding, MODEL [RefSeq] |
| 13885378 | SHROOM1 | shroom family member 1 | ENCODES a protein that exhibits actin binding (inferred); actin filament binding (inferred); myosin II binding (inferred); INVOLVED IN actin filament bundle assembly (inferred); cell morphogenesis (inferred); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoskeleton (inferred); microtubule (inferre d); INTERACTS WITH deoxynivalenol | | | | Pig | 18 | symbol , name | gene, protein-coding, MODEL [RefSeq] |
| 18717212 | SHROOM1 | shroom family member 1 | ENCODES a protein that exhibits actin binding (inferred); actin filament binding (inferred); myosin II binding (inferred); INVOLVED IN actin filament bundle assembly (inferred); actin filament organization (inferred); cell morphogenesis (inferred); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN adher ens junction (inferred); apical junction complex (inferred); apical plasma membrane (inferred) | | | | Green Monkey | 18 | symbol , old_gene_name , name | gene, protein-coding, MODEL [RefSeq] |
| 18931736 | Shroom1 | shroom family member 1 | ENCODES a protein that exhibits myosin II binding (ortholog); INVOLVED IN actin filament bundle assembly (inferred); actin filament organization (inferred); cell morphogenesis (inferred); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN adherens junction (inferred); apical junction complex (inferred); apical plasma membrane (inferred) | | | | Naked Mole-Rat | 15 | symbol , old_gene_name , name | gene, protein-coding, MODEL [RefSeq] |
| 155250844 | shroom1 | | | | | | Tropical Clawed Frog | | symbol | gene, null |
| 625900258 | Shroom1 | shroom family member 1 | ENCODES a protein that exhibits actin filament binding (ortholog); myosin II binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH COVID-19 (ortholog) | | | | Black Rat | 5 | symbol , old_gene_name , name | gene, protein-coding, MODEL [RefSeq] |
| 1343092 | SHROOM2 | shroom family member 2 | This gene represents the human homolog of Xenopus laevis apical protein (APX) gene, which is implicated in amiloride-sensitive sodium channel activity. It is expressed in endothelial cells and facilitates the formation of a contractile network within endothelial cells. Depletion of this gene results in an increase in endothelial sprouting, migration, and angiogenesis. This gene is highly expressed in the retina, and is a strong candidate for ocular albinism type 1 syndrome. Alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Mar 2016] | X | 9786429 | 9949443 | Human | 131 | symbol , COSMIC , name , Human Proteome Map | gene, protein-coding, REVIEWED [RefSeq] |
| 1565163 | Shroom2 | shroom family member 2 | ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); beta-catenin binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); cell migration (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH Meniere's disease (ortholog); FOUND IN adhere ns junction (ortholog); apical junction complex (ortholog); apical plasma membrane (ortholog); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 3,3',4,4',5-pentachlorobiphenyl | X | 25308163 | 25480194 | Rat | 127 | symbol , PhenoGen , name | gene, protein-coding, VALIDATED [RefSeq] |
| 8751490 | Shroom2 | shroom family member 2 | ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); beta-catenin binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); cell migration (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH Meniere's disease (ortholog); FOUND IN adhere ns junction (ortholog); apical junction complex (ortholog); apical plasma membrane (ortholog) | NW_004955499 | 8031961 | 8103307 | Chinchilla | 26 | symbol , name | gene, protein-coding, MODEL [RefSeq] |
| 11860217 | SHROOM2 | shroom family member 2 | ENCODES a protein that exhibits beta-catenin binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); cell migration (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH Meniere's disease (ortholog); FOUND IN bicellular tight juncti on (ortholog); cell cortex (ortholog); cell-cell junction (ortholog) | X | 2418883 | 2580853 | Bonobo | 30 | symbol , name | gene, protein-coding, MODEL [RefSeq] |
| 12200608 | SHROOM2 | shroom family member 2 | ENCODES a protein that exhibits beta-catenin binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); cell migration (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH Meniere's disease (ortholog); FOUND IN adherens junction (orth olog); apical junction complex (ortholog); apical plasma membrane (ortholog) | X | 6499570 | 6642738 | Dog | 28 | symbol , old_gene_name , name | gene, protein-coding, MODEL [RefSeq] |
| 13869049 | SHROOM2 | shroom family member 2 | ENCODES a protein that exhibits beta-catenin binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); cell migration (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH Meniere's disease (ortholog); FOUND IN adherens junction (orth olog); apical junction complex (ortholog); apical plasma membrane (ortholog) | | | | Pig | 33 | symbol , old_gene_name , name | gene, protein-coding, MODEL [RefSeq] |
| 18628013 | SHROOM2 | shroom family member 2 | ENCODES a protein that exhibits beta-catenin binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); cell migration (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH Meniere's disease (ortholog); FOUND IN bicellular tight juncti on (ortholog); cell cortex (ortholog); cell-cell junction (ortholog) | | | | Green Monkey | 30 | symbol , old_gene_name , name | gene, protein-coding, MODEL [RefSeq] |
| 18910264 | Shroom2 | shroom family member 2 | ENCODES a protein that exhibits beta-catenin binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); cell migration (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH Meniere's disease (ortholog); FOUND IN bicellular tight juncti on (ortholog); cell cortex (ortholog); cell-cell junction (ortholog) | | | | Naked Mole-Rat | 30 | symbol , old_gene_name , name | gene, protein-coding, MODEL [RefSeq] |
| 155243180 | shroom2 | | | | | | Tropical Clawed Frog | | symbol | gene, null |
| 408408896 | SHROOM2 | | ENCODES a protein that exhibits actin filament binding (inferred); FOUND IN cytoskeleton (inferred) | | | | Dog | 2 | symbol | gene, protein-coding |
| 625872072 | Shroom2 | shroom family member 2 | ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); beta-catenin binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); cell migration (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH Meniere's disease (ortholog); FOUND IN adhere ns junction (ortholog); apical junction complex (ortholog); apical plasma membrane (ortholog) | | | | Black Rat | 26 | symbol , old_gene_name , name | gene, protein-coding, MODEL [RefSeq] |
| 629128870 | Shroom2 | shroom family member 2 | INVOLVED IN cell morphogenesis (ortholog); ASSOCIATED WITH Meniere's disease (ortholog); FOUND IN cortical actin cytoskeleton (ortholog) | | | | Squirrel | 4 | symbol , old_gene_name , name | gene, protein-coding, MODEL [RefSeq] |
| 1310470 | Shroom3 | shroom family member 3 | ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); columnar/cuboidal epithelial cell development (ortholog); neural tube closure (ortholog); ASSOCIATED WITH tetralogy of Fallot (ortholog); FOUND IN adherens junction (ortholog); apical ju nction complex (ortholog); apical part of cell (ortholog); INTERACTS WITH 17beta-estradiol; 6-propyl-2-thiouracil; bisphenol A | 14 | 15383769 | 15681158 | Rat | 117 | symbol , old_gene_name , PhenoGen , name , old_gene_symbol | gene, protein-coding, PROVISIONAL [RefSeq] |
| 1602873 | SHROOM3 | shroom family member 3 | This gene encodes a PDZ-domain-containing protein that belongs to a family of Shroom-related proteins. This protein may be involved in regulating cell shape in certain tissues. A similar protein in mice is required for proper neurulation. [provided by RefSeq, Ja n 2011] | 4 | 76435229 | 76783253 | Human | 128 | symbol , old_gene_name , COSMIC , name , description , Human Proteome Map , old_gene_symbol | gene, protein-coding, REVIEWED [RefSeq] |
| 8961022 | Shroom3 | shroom family member 3 | ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); columnar/cuboidal epithelial cell development (ortholog); neural tube closure (ortholog); ASSOCIATED WITH tetralogy of Fallot (ortholog); FOUND IN adherens junction (ortholog); apical ju nction complex (ortholog); apical part of cell (ortholog) | NW_004955433 | 1135589 | 1423449 | Chinchilla | 13 | symbol , name | gene, protein-coding, MODEL [RefSeq] |
| 11921975 | SHROOM3 | shroom family member 3 | ENCODES a protein that exhibits actin binding (inferred); actin filament binding (inferred); INVOLVED IN actin cytoskeleton organization (ortholog); columnar/cuboidal epithelial cell development (ortholog); neural tube closure (ortholog); ASSOCIATED WITH tetralogy of Fallot (ortholog); FOUND IN apic al part of cell (ortholog) | 4 | 47420351 | 47767325 | Bonobo | 19 | symbol , name | gene, protein-coding, MODEL [RefSeq] |
| 12374907 | SHROOM3 | shroom family member 3 | ENCODES a protein that exhibits actin binding (inferred); actin filament binding (inferred); INVOLVED IN actin cytoskeleton organization (ortholog); columnar/cuboidal epithelial cell development (ortholog); neural tube closure (ortholog); ASSOCIATED WITH tetralogy of Fallot (ortholog); FOUND IN adhe rens junction (ortholog); apical junction complex (ortholog); apical part of cell (ortholog) | 32 | 1218513 | 1392014 | Dog | 22 | symbol , old_gene_name , name | gene, protein-coding, MODEL [RefSeq] |
| 12597049 | Shroom3 | shroom family member 3 | ENCODES a protein that exhibits actin binding (inferred); actin filament binding (inferred); INVOLVED IN actin cytoskeleton organization (ortholog); columnar/cuboidal epithelial cell development (ortholog); neural tube closure (ortholog); ASSOCIATED WITH tetralogy of Fallot (ortholog); FOUND IN apic al part of cell (ortholog) | NW_004936676 | 533654 | 703549 | Squirrel | 20 | symbol , old_gene_name , name | gene, protein-coding, MODEL [RefSeq] |
| 13887862 | SHROOM3 | shroom family member 3 | ENCODES a protein that exhibits actin binding (inferred); actin filament binding (inferred); INVOLVED IN actin cytoskeleton organization (ortholog); columnar/cuboidal epithelial cell development (ortholog); neural tube closure (ortholog); ASSOCIATED WITH tetralogy of Fallot (ortholog); FOUND IN adhe rens junction (ortholog); apical junction complex (ortholog); apical part of cell (ortholog) | | | | Pig | 16 | symbol , name | gene, protein-coding, MODEL [RefSeq] |
| 18617501 | SHROOM3 | shroom family member 3 | ENCODES a protein that exhibits actin binding (inferred); actin filament binding (inferred); INVOLVED IN actin cytoskeleton organization (ortholog); columnar/cuboidal epithelial cell development (ortholog); neural tube closure (ortholog); ASSOCIATED WITH tetralogy of Fallot (ortholog); FOUND IN apic al part of cell (ortholog) | | | | Green Monkey | 19 | symbol , old_gene_name , name | gene, protein-coding, MODEL [RefSeq] |
| 18928921 | Shroom3 | shroom family member 3 | ENCODES a protein that exhibits actin binding (inferred); actin filament binding (inferred); INVOLVED IN actin cytoskeleton organization (ortholog); columnar/cuboidal epithelial cell development (ortholog); neural tube closure (ortholog); ASSOCIATED WITH tetralogy of Fallot (ortholog); FOUND IN apic al part of cell (ortholog) | | | | Naked Mole-Rat | 20 | symbol , old_gene_name , name | gene, protein-coding, MODEL [RefSeq] |
| 155249210 | shroom3 | | | | | | Tropical Clawed Frog | | symbol | gene, null |
| 625883683 | Shroom3 | shroom family member 3 | ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); columnar/cuboidal epithelial cell development (ortholog); neural tube closure (ortholog); ASSOCIATED WITH tetralogy of Fallot (ortholog); FOUND IN adherens junction (ortholog); apical ju nction complex (ortholog); apical part of cell (ortholog) | | | | Black Rat | 13 | symbol , old_gene_name , name | gene, protein-coding, MODEL [RefSeq] |
| 1563434 | Shroom4 | shroom family member 4 | ENCODES a protein that exhibits actin filament binding (ortholog); myosin II binding (ortholog); INVOLVED IN regulation of postsynaptic membrane neurotransmitter receptor levels; actin filament organization (ortholog); brain development (ortholog); ASSOCIATED WITH intellectual disability (ortholog); Stocco Dos Santos type X-linked intellectual disability (ortholog); FOUND IN GABA-ergic synapse; glutamatergic synapse; postsynapse; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 3,3',4,4',5-pentachlorobiphenyl | X | 18537371 | 18748665 | Rat | 93 | symbol , PhenoGen , name | gene, protein-coding, PROVISIONAL [RefSeq] |
| 1606521 | SHROOM4 | shroom family member 4 | This gene encodes a member of the APX/Shroom family, which contain an N-terminal PDZ domain and a C-terminal ASD2 motif. The encoded protein may play a role in cytoskeletal architecture. Mutations in this gene have been linked to the X-linked Stocco dos Santos s yndrome characterized by cognitive disabilities. Alternatively spliced transcript variants have been described. [provided by RefSeq, Jul 2017] | X | 50575534 | 50814194 | Human | 113 | symbol , COSMIC , name , description , Human Proteome Map , old_gene_symbol | gene, protein-coding, REVIEWED [RefSeq] |
| 8765133 | Shroom4 | shroom family member 4 | ENCODES a protein that exhibits actin filament binding (ortholog); myosin II binding (ortholog); INVOLVED IN actin filament organization (ortholog); brain development (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH intellectual disability (ortholog); Stocco Dos Santos type X-linked intell ectual disability (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); apical plasma membrane (ortholog) | NW_004955543 | 1810125 | 2046144 | Chinchilla | 21 | symbol , name | gene, protein-coding, MODEL [RefSeq] |
| 11822410 | SHROOM4 | shroom family member 4 | ENCODES a protein that exhibits actin binding (inferred); actin filament binding (inferred); myosin II binding (inferred); INVOLVED IN actin filament organization (ortholog); cell morphogenesis (ortholog); regulation of postsynaptic membrane neurotransmitter receptor levels (ortholog); ASSOCIATED WI TH intellectual disability (ortholog); Stocco Dos Santos type X-linked intellectual disability (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); postsynapse (ortholog) | X | 42673968 | 42974947 | Bonobo | 30 | symbol , name | gene, protein-coding, MODEL [RefSeq] |
| 12422046 | SHROOM4 | shroom family member 4 | ENCODES a protein that exhibits actin binding (inferred); actin filament binding (inferred); myosin II binding (inferred); INVOLVED IN actin filament organization (ortholog); cell morphogenesis (ortholog); regulation of postsynaptic membrane neurotransmitter receptor levels (ortholog); ASSOCIATED WI TH intellectual disability (ortholog); Stocco Dos Santos type X-linked intellectual disability (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); postsynapse (ortholog) | X | 43366921 | 43639525 | Dog | 30 | symbol , old_gene_name , name | gene, protein-coding, MODEL [RefSeq] |
| 12726948 | Shroom4 | shroom family member 4 | ENCODES a protein that exhibits actin filament binding (ortholog); myosin II binding (ortholog); INVOLVED IN actin filament organization (ortholog); brain development (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH intellectual disability (ortholog); Stocco Dos Santos type X-linked intell ectual disability (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); apical plasma membrane (ortholog) | NW_004936721 | 2068731 | 2166537 | Squirrel | 21 | symbol , old_gene_name , name | gene, protein-coding, MODEL [RefSeq] |
| 14109377 | SHROOM4 | shroom family member 4 | ENCODES a protein that exhibits actin binding (inferred); actin filament binding (inferred); myosin II binding (inferred); INVOLVED IN actin filament organization (ortholog); cell morphogenesis (ortholog); regulation of postsynaptic membrane neurotransmitter receptor levels (ortholog); ASSOCIATED WI TH intellectual disability (ortholog); Stocco Dos Santos type X-linked intellectual disability (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); postsynapse (ortholog) | | | | Pig | 30 | symbol , old_gene_name , name | gene, protein-coding, MODEL [RefSeq] |
| 18368088 | SHROOM4 | shroom family member 4 | ENCODES a protein that exhibits actin binding (inferred); actin filament binding (inferred); myosin II binding (inferred); INVOLVED IN actin filament organization (ortholog); cell morphogenesis (ortholog); regulation of postsynaptic membrane neurotransmitter receptor levels (ortholog); ASSOCIATED WI TH intellectual disability (ortholog); Stocco Dos Santos type X-linked intellectual disability (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); postsynapse (ortholog) | | | | Green Monkey | 30 | symbol , old_gene_name , name | gene, protein-coding, MODEL [RefSeq] |
| 18909371 | Shroom4 | shroom family member 4 | ENCODES a protein that exhibits myosin II binding (ortholog); INVOLVED IN actin filament organization (ortholog); brain development (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH intellectual disability (ortholog); Stocco Dos Santos type X-linked intellectual disability (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); basal plasma membrane (ortholog) | | | | Naked Mole-Rat | 28 | symbol , old_gene_name , name | gene, protein-coding, MODEL [RefSeq] |
| 285447421 | shroom4 | | | | | | Tropical Clawed Frog | | symbol | gene, null |
| 626149641 | Shroom4 | shroom family member 4 | ENCODES a protein that exhibits actin filament binding (ortholog); myosin II binding (ortholog); INVOLVED IN actin filament organization (ortholog); brain development (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH intellectual disability (ortholog); Stocco Dos Santos type X-linked intell ectual disability (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); apical plasma membrane (ortholog) | | | | Black Rat | 21 | symbol , old_gene_name , name | gene, protein-coding, MODEL [RefSeq] |
| 155258421 | shroom1.L | | | | | | African Clawed Frog | | symbol | gene, null |
| 626184676 | shroom1.S | | | | | | African Clawed Frog | | symbol | gene, null |
| 155234941 | shroom2.L | | | | | | African Clawed Frog | | symbol | gene, null |
| 626182007 | shroom2.S | | | | | | African Clawed Frog | | symbol | gene, null |
| 1351345 | SHROOM2P1 | shroom family member 2 pseudogene 1 | | Y | 12541058 | 12543220 | Human | | symbol , COSMIC , name , Human Proteome Map | gene, pseudo, INFERRED [RefSeq] |
| 155249209 | shroom3.L | | | | | | African Clawed Frog | | symbol | gene, null |
| 626174094 | shroom3.S | | | | | | African Clawed Frog | | symbol | gene, null |
| 284173989 | shroom4.L | | | | | | African Clawed Frog | | symbol | gene, null |
| 21410054 | SHROOM3-AS1 | SHROOM3 antisense RNA 1 | | 4 | 76709906 | 76802463 | Human | | symbol , GTEx , COSMIC , name , Human Proteome Map | gene, ncrna, VALIDATED [RefSeq] |
| 629021598 | SHROOM3-AS2 | SHROOM3 antisense RNA 2 | | | | | Human | | symbol , GTEx , COSMIC , name , Human Proteome Map | gene, ncrna |
| 1315266 | EXOSC2 | exosome component 2 | Predicted to enable RNA binding activity. Involved in RNA catabolic process; RNA processing; and positive regulation of cell growth. Located in cytosol; nucleolus; and nucleoplasm. Part of nuclear exosome (RNase complex). Implicated in short stature, hearing loss, retinitis pigmentosa, and distincti ve facies. [provided by Alliance of Genome Resources, Jul 2025] | 9 | 130693760 | 130704894 | Human | 214 | old_gene_symbol | gene, protein-coding, VALIDATED [RefSeq] |
| 10898 | Mip | major intrinsic protein of lens fiber | Enables water channel activity. A structural constituent of eye lens. Acts upstream of or within lens development in camera-type eye; visual perception; and water transport. Located in plasma membrane. Is expressed in several structures, including eye; femur; and main olfactory bulb. Used to study c ataract 15 multiple types. Human ortholog(s) of this gene implicated in cataract and cataract 15 multiple types. Orthologous to human MIP (major intrinsic protein of lens fiber). [provided by Alliance of Genome Resources, Apr 2025] | 10 | 128061679 | 128067681 | Mouse | 123 | old_gene_name , old_gene_symbol | gene, protein-coding, VALIDATED [RefSeq] |
| 1624066 | Ttn | titin | Enables ankyrin binding activity. Involved in heart development; regulation of relaxation of cardiac muscle; and somitogenesis. Acts upstream of or within several processes, including forward locomotion; heart development; and sarcomere organization. Located in M band and Z disc. Is expressed in sev eral structures, including alimentary system; embryo mesenchyme; heart; lung; and musculature. Used to study autosomal recessive limb-girdle muscular dystrophy type 2J; dilated cardiomyopathy 1G; and tibial muscular dystrophy. Human ortholog(s) of this gene implicated in intrinsic cardiomyopathy (multiple) and myopathy (multiple). Orthologous to human TTN (titin). [provided by Alliance of Genome Resources, Jul 2025] | 2 | 76534324 | 76812901 | Mouse | 521 | old_gene_symbol | gene, protein-coding, VALIDATED [RefSeq] |
| 1603390 | AJAP1 | adherens junctions associated protein 1 | Enables beta-catenin binding activity. Involved in negative regulation of cell-matrix adhesion; negative regulation of wound healing; and regulation of polarized epithelial cell differentiation. Located in several cellular components, including adherens junction; basolateral plasma membrane; and cel l-cell contact zone. [provided by Alliance of Genome Resources, Jul 2025] | 1 | 4654609 | 4792534 | Human | 86 | old_gene_name , old_gene_symbol | gene, protein-coding, VALIDATED [RefSeq] |
| 12451444 | LOC101954944 | protein Shroom2 | ENCODES a protein that exhibits beta-catenin binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); cell migration (ortholog); cell morphogenesis (ortholog); FOUND IN bicellular tight junction (ortholog); cell cortex (ortholog); cell-ce ll junction (ortholog) | NW_004936644 | 42620 | 127481 | Squirrel | 27 | old_gene_name , name , old_gene_symbol | gene, protein-coding, MODEL [RefSeq] |
| 14394503 | Klrb1aem1Mcwi | killer cell lectin-like receptor subfamily B, member 1A; CRISPR/Cas9 induced mutant 1, Mcwi | CRISPR/Cas9 system was used to introduce a 5-bp deletion in exon 2 in SHR/NCrl embryos. | | | | Rat | | description | gene, allele |
| 14394505 | Klrb1aem2Mcwi | killer cell lectin-like receptor subfamily B, member 1A; CRISPR/Cas9 induced mutant 2, Mcwi | CRISPR/Cas9 system was used to introduce a 102-bp deletion in exon 2 in SHR/NCrl embryos. | | | | Rat | | description | gene, allele |
| 149735372 | C3em1Kyo | complement C3; ZFN induced mutant 1, Kyo | ZFN constructs specific for the rat C3 gene were designed to target bases 1803-1841 (NCBI reference sequence: NM_016994) of C3 (target sequence: cagggggcccgagtgggctagtggctgtggacaagggg) by Sigma-Aldrich (Tokyo, Japan). The ZFN systems were injected into the pronucleus of SHR '>SHR/Izm embryos. The pups were identified by primers flanking the target sequence (forward primer: 5'-ACTCTTCCCTGTCTTGCGTC-3'; reverse primer: 5'--AATAGAGGCCACCAATGCAC-3'). This mutant allele revealed a 9-base frameshift deletion of bases 1815-1824 (ggctagtgg). | | | | Rat | | description | gene, allele |
| 19259465 | Camk2n1em1Tja | calcium/calmodulin-dependent protein kinase II inhibitor 1; ZFN induced mutant 1, Tja | INVOLVED IN positive regulation of insulin secretion involved in cellular response to glucose stimulus; positive regulation of systemic arterial blood pressure; ASSOCIATED WITH decreased brown adipose tissue mass; decreased epididymal fat pad weight; decreased heart left ventricle weight | | | | Rat | 9 | description | gene, allele |
| 127285405 | Cfbem1Tja | complement factor B, ZFN induced mutant 1, Tja | ASSOCIATED WITH decreased brown adipose tissue amount; decreased circulating aldosterone level; decreased circulating cholesterol level | | | | Rat | 13 | description | gene, allele |
| 12791992 | Gja8m1Cub | gap junction protein, alpha 8; mutant 1 Cub | ASSOCIATED WITH abnormal lens capsule morphology; abnormal lens development; abnormal lens epithelium morphology; ASSOCIATED WITH cataract; cataract 1 multiple types; microphthalmia | | | | Rat | 34 | description | gene, allele |
| 10002755 | Sbf1m1Ipcv | SET binding factor 1; mutation 1, Institute of Physiology, Czechoslovac Academy of Sciences | ASSOCIATED WITH arrest of spermiogenesis; azoospermia; decreased testis weight | | | | Rat | 4 | description | gene, allele |
| 150340624 | Zbtb16em1Ipcv | zinc finger and BTB domain containing 16; TALEN induced mutant 1, Ipcv | ASSOCIATED WITH cardiac interstitial fibrosis; decreased body weight; decreased circulating cholesterol level | | | | Rat | 10 | description | gene, allele |
| 12910834 | Zbtb16Lx | zinc finger and BTB domain containing 16, Lx mutant | ASSOCIATED WITH preaxial polydactyly; ASSOCIATED WITH polydactyly | | | | Rat | 2 | description | gene, allele |
| 12429847 | LOC102156087 | protein Shroom3-like | | 16 | 11869128 | 11871492 | Dog | | name | gene, pseudo, MODEL [RefSeq] |
| 18905146 | LOC106009480 | protein Shroom2-like | ENCODES a protein that exhibits actin filament binding (inferred); INVOLVED IN actin filament organization (inferred); FOUND IN adherens junction (inferred); apical junction complex (inferred); apical plasma membrane (inferred) | | | | Naked Mole-Rat | 8 | name | gene, protein-coding, MODEL [RefSeq] |
| 625852440 | LOC116912653 | protein Shroom3-like | | | | | Black Rat | | name | gene, protein-coding, MODEL [RefSeq] |
| 40916950 | LOC119868743 | protein Shroom2-like | | | | | Dog | | name | gene, pseudo, MODEL [RefSeq] |
| 40907562 | LOC119874708 | protein Shroom3-like | | | | | Dog | | name | gene, pseudo, MODEL [RefSeq] |
| 40914311 | LOC119877120 | protein Shroom3-like | | | | | Dog | | name | gene, pseudo, MODEL [RefSeq] |
| 40914335 | LOC119880419 | protein Shroom3-like | | | | | Dog | | name | gene, pseudo, MODEL [RefSeq] |
| 329345632 | LOC129395504 | protein Shroom2-like | | | | | Bonobo | | name | gene, pseudo, MODEL [RefSeq] |
| 1590138 | Ajap1 | adherens junctions associated protein 1 | ENCODES a protein that exhibits beta-catenin binding (ortholog); protein domain specific binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN negative regulation of cell-matrix adhesion (ortholog); negative regulation of wound healing (ortholog); regulation of polarized epi thelial cell differentiation (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN adherens junction (ortholog); basolateral plasma membrane (ortholog); cell surface (ortholog); INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil | 5 | 169190477 | 169302938 | Rat | 89 | old_gene_name | gene, protein-coding, PROVISIONAL [RefSeq] |
| 1606338 | DFFA | DNA fragmentation factor subunit alpha | Apoptosis is a cell death process that removes toxic and/or useless cells during mammalian development. The apoptotic process is accompanied by shrinkage and fragmentation of the cells and nuclei and degradation of the chromosomal DNA into nucleosomal units. DNA fragmentation factor (DFF) is a heterodimeric protein of 40-kD (DFFB) and 45-kD (DFFA) subunits. DFFA is the substrate for caspase-3 and triggers DNA fragmentation during apoptosis. DFF becomes activated when DFFA is cleaved by caspase-3. The cleaved fragments of DFFA dissociate from DFFB, the active component of DFF. DFFB has been found to trigger both DNA fragmentation and chromatin condensation during apoptosis. Two alternatively spliced transcript variants encoding distinct isoforms have been found for this gene. [provided by RefSeq, Jul 2008] | 1 | 10456522 | 10472529 | Human | 167 | description | gene, protein-coding, REVIEWED [RefSeq] |
| 731033 | DFFB | DNA fragmentation factor subunit beta | Apoptosis is a cell death process that removes toxic and/or useless cells during mammalian development. The apoptotic process is accompanied by shrinkage and fragmentation of the cells and nuclei and degradation of the chromosomal DNA into nucleosomal units. DNA fragmentation factor (DFF) is a heterodimeric protein of 40-kD (DFFB) and 45-kD (DFFA) subunits. DFFA is the substrate for caspase-3 and triggers DNA fragmentation during apoptosis. DFF becomes activated when DFFA is cleaved by caspase-3. The cleaved fragments of DFFA dissociate from DFFB, the active component of DFF. DFFB has been found to trigger both DNA fragmentation and chromatin condensation during apoptosis. Alternatively spliced transcript variants encoding distinct isoforms have been found for this gene but the biological validity of some of these variants has not been determined. [provided by RefSeq, Sep 2013] | 1 | 3857476 | 3885429 | Human | 161 | description | gene, protein-coding, REVIEWED [RefSeq] |
| 1604485 | IZUMO1 | izumo sperm-oocyte fusion 1 | The sperm-specific protein Izumo, named for a Japanese shrine dedicated to marriage, is essential for sperm-egg plasma membrane binding and fusion (Inoue et al., 2005 [PubMed 15759005]).[supplied by OMIM, Mar 2008] | 19 | 48740852 | 48746909 | Human | 63 | description | gene, protein-coding, VALIDATED [RefSeq] |
| 13792814 | Spp1em2Mcwi | secreted phosphoprotein 1; CRISPR/Cas9 induced mutant 2, Mcwi | CRISPR/Cas9 system was used to introduce a mutation in the Spp1 gene of SHRSP/A3NCrl rat embryos. The resulting mutation is a 11-bp deletion in Exon 3 of the Spp1 gene. | | | | Rat | | description | gene, allele |
| 1609478 | Ajap1 | adherens junction associated protein 1 | Enables protein domain specific binding activity. Predicted to be involved in negative regulation of cell-matrix adhesion; negative regulation of wound healing; and regulation of polarized epithelial cell differentiation. Predicted to be located in basolateral plasma membrane and cell surface. Predi cted to be active in adherens junction; cell-cell contact zone; and cytoplasmic side of plasma membrane. Is expressed in several structures, including adrenal gland; brain; eye; genitourinary system; and spinal cord. Orthologous to human AJAP1 (adherens junctions associated protein 1). [provided by Alliance of Genome Resources, Jul 2025] | 4 | 153457678 | 153568313 | Mouse | 111 | old_gene_name | gene, protein-coding, VALIDATED [RefSeq] |