Sbf1<i><sup>m1Ipcv</sup></i> (SET binding factor 1; mutation 1, Institute of Physiology, Czechoslovac Academy of Sciences)

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Gene: Sbf1^m1Ipcv (SET binding factor 1; mutation 1, Institute of Physiology, Czechoslovac Academy of Sciences) Rattus norvegicus

Analyze

Symbol:

Sbf1^m1Ipcv

Name:

SET binding factor 1; mutation 1, Institute of Physiology, Czechoslovac Academy of Sciences

RGD ID:

10002755

Description:

spontaneous recessive mutation found in the colony of SHR/OlaIpcv; the mutated nucleotide is chr7:127585309 (of Baylor 3.4) and it is last nucleotide of intron 37 (-1 of exon 38) of Sbf1 gene.
ASSOCIATED WITH arrest of spermiogenesis; azoospermia; decreased testis weight

Type:

allele of Sbf1

Also known as:

ifm; ifm; Sbf1m1Ipcv

Is Marker For:

Strains: SHR-Sbf1^m1Ipcv SHR/OlaIpcv

Latest Assembly:

Rnor_6.0 - RGSC Genome Assembly v6.0

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
RGSC_v3.4	7	127,585,309 - 127,585,309	RGD	RGSC3.4		rn4	RGSC3.4

Annotation Click to see Annotation Detail View

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

arrest of spermiogenesis (IMP)

azoospermia (IMP)

decreased testis weight (IMP)

male infertility (IMP)

References

References - curated


1.	Liška F, etal., Reproduction. 2016 Sep;152(3):215-23. doi: 10.1530/REP-16-0042. Epub 2016 Jun 22.
2.	Personal communication between Dr. V. Kren's group and the RGD curators.

Genomics

Related Rat Strains

The following Strains have been annotated to Sbf1^m1Ipcv

SHR-Sbf1^m1Ipcv

SHR/OlaIpcv

Expression

Sequence

Nucleotide Sequences

Additional Information

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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