Gene: Shroom3 (shroom family member 3) Rattus norvegicus
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Symbol: Shroom3
Name: shroom family member 3
Description: ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); columnar/cuboidal epithelial cell development (ortholog); neural tube closure (ortholog); FOUND IN adherens junction (ortholog); apical junction complex (ortholog); apical part of cell (ortholog); INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; C60 fullerene
AGR Description: Predicted to have actin filament binding activity; predicted to be involved in several processes, including actin filament organization, columnar/cuboidal epithelial cell development, and neural tube closure; predicted to localize to several cellular components, including the adherens junction, apical junction complex, and apical plasma membrane; orthologous to human SHROOM3 (shroom family member 3).
Merged Description: Predicted to have actin filament binding activity; predicted to be involved in several processes, including actin filament organization, columnar/cuboidal epithelial cell development, and neural tube closure; predicted to localize to several cellular components, including the adherens junction, apical junction complex, and apical plasma membrane; orthologous to human SHROOM3 (shroom family member 3); INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; C60 fullerene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC305230; RGD1310470; Shrm; similar to PDZ domain actin binding protein Shroom
Orthologs:
Homo sapiens (human) : SHROOM3 (shroom family member 3)  HGNC  Alliance
Mus musculus (house mouse) : Shroom3 (shroom family member 3)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Shroom3 (shroom family member 3)
Pan paniscus (bonobo/pygmy chimpanzee) : SHROOM3 (shroom family member 3)
Canis lupus familiaris (dog) : SHROOM3 (shroom family member 3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Shroom3 (shroom family member 3)
Sus scrofa (pig) : SHROOM3 (shroom family member 3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01416,622,767 - 16,903,265 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01416,547,964 - 16,817,192 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41416,658,357 - 16,954,651 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11416,659,176 - 16,710,986 (-)NCBI
Celera1414,501,250 - 14,791,213 (-)NCBICelera
Cytogenetic Map14p22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Shroom3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1310470
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.