RH127547 Marker Search Result - Rat Genome Database

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Marker: RH127547

Symbol: RH127547
Previously known as: AA818992; 
RGD ID: 5039162
Expected Size: 384 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81213,250,726 - 13,251,110 (+)Marker Load Pipeline
mRatBN7.22185,201,535 - 185,201,724 (+)MAPPERmRatBN7.2
mRatBN7.2128,136,829 - 8,137,213 (+)MAPPERmRatBN7.2
Rnor_6.0129,856,925 - 9,857,308NCBIRnor6.0
Rnor_6.02199,776,213 - 199,776,401NCBIRnor6.0
Rnor_5.01211,968,680 - 11,969,063UniSTSRnor5.0
Rnor_5.02219,254,159 - 219,254,347UniSTSRnor5.0
RGSC_v3.42192,442,430 - 192,442,618UniSTSRGSC3.4
Celera129,959,005 - 9,959,388UniSTS
Celera2177,694,036 - 177,694,224UniSTS
RH 3.4 Map21255.3UniSTS
Is Marker For: Genes:   Gtf3a   Mtif3   LOC100361583  




#
Reference Title
Reference Citation
1. UniSTS Pipeline RGD automated pipelines


 
Forward Primer AGTGGACAGTAAGTGACGCAGC
Reverse Primer GGTCCTGACAAGAAGAGGATGG
 


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1592673Mtif3mitochondrial translational initiation factor 31281261938140706Rat
619746Gtf3ageneral transcription factor III A1281367468144690Rat
1311935Chd1lchromodomain helicase DNA binding protein 1-like2185138526185217498Rat
628602Fmo5flavin containing dimethylaniline monoxygenase 52185197184185249699Rat
RefSeq Transcripts NM_001115041 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide BC158794 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


1 to 10 of 126 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2312418Kidm41Kidney mass QTL 413.70.0001kidney mass (VT:0002707)single kidney wet weight to body weight ratio (CMO:0000622)12119611090Rat
8552964Pigfal17Plasma insulin-like growth factor 1 level QTL 173.5blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449546669029Rat
7411641Foco19Food consumption QTL 1927.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
9590147Scort7Serum corticosterone level QTL 713.610.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)12142110980Rat
8552912Pigfal6Plasma insulin-like growth factor 1 level QTL 65blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449846669029Rat
10059594Kidm46Kidney mass QTL 463.790.025kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)12610757946669029Rat
1581516Cm56Cardiac mass QTL 564.20.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)12129333307Rat
9590086Insglur6Insulin/glucose ratio QTL 618.970.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)12142110980Rat
8552918Pigfal7Plasma insulin-like growth factor 1 level QTL 7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449546669029Rat
6893681Bw109Body weight QTL 1092.30.004body mass (VT:0001259)body weight (CMO:0000012)12123297788Rat

1 to 10 of 126 rows


Database
Acc Id
Source(s)
NCBI Gene 100361583 UniSTS
  246299 UniSTS
  684274 UniSTS