Symbol:
Kcnh1
Name:
potassium voltage-gated channel subfamily H member 1
RGD ID:
68398
Description:
Enables several functions, including 14-3-3 protein binding activity; calmodulin binding activity; and delayed rectifier potassium channel activity. Involved in cellular response to calcium ion; potassium ion transmembrane transport; and startle response. Located in several cellular components, including axolemma; neuronal cell body; and nuclear inner membrane. Part of potassium channel complex. Is active in postsynaptic density membrane and presynaptic membrane. Human ortholog(s) of this gene implicated in colorectal adenocarcinoma. Orthologous to human KCNH1 (potassium voltage-gated channel subfamily H member 1); INTERACTS WITH 6-propyl-2-thiouracil; alpha-Zearalanol; amitrole.
Type:
protein-coding
RefSeq Status:
VALIDATED
Previously known as:
EAG channel 1; EAG1; ether-a-go-go potassium channel 1; potassium channel, voltage gated eag related subfamily H, member 1; potassium voltage-gated channel, subfamily H (eag-related), member 1; r-eag; voltage-gated delayed rectifier potassium channel KCNH1; voltage-gated potassium channel subunit Kv10.1
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Species
Gene symbol and name
Data Source
Assertion derived from
less info ...
Orthologs 1
Homo sapiens (human):
KCNH1 (potassium voltage-gated channel subfamily H member 1) HGNC
Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):
Kcnh1 (potassium voltage-gated channel, subfamily H (eag-related), member 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):
Kcnh1 (potassium voltage-gated channel subfamily H member 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):
KCNH1 (potassium voltage-gated channel subfamily H member 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Canis lupus familiaris (dog):
KCNH1 (potassium voltage-gated channel subfamily H member 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Kcnh1 (potassium voltage-gated channel subfamily H member 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Sus scrofa (pig):
KCNH1 (potassium voltage-gated channel subfamily H member 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):
KCNH1 (potassium voltage-gated channel subfamily H member 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):
Kcnh1 (potassium voltage-gated channel subfamily H member 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Other homologs 2
Homo sapiens (human):
KCNH5 (potassium voltage-gated channel subfamily H member 5) HGNC
OrthoDB
Alliance orthologs 3
Homo sapiens (human):
KCNH1 (potassium voltage-gated channel subfamily H member 1)
Alliance
DIOPT (Ensembl Compara|HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Mus musculus (house mouse):
Kcnh1 (potassium voltage-gated channel, subfamily H (eag-related), member 1)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Danio rerio (zebrafish):
kcnh1b (potassium voltage-gated channel, subfamily H (eag-related), member 1b)
Alliance
DIOPT (OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Danio rerio (zebrafish):
kcnh1a (potassium voltage-gated channel, subfamily H (eag-related), member 1a)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Caenorhabditis elegans (roundworm):
egl-2
Alliance
DIOPT (Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Drosophila melanogaster (fruit fly):
eag
Alliance
DIOPT (Hieranoid|InParanoid|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):
epm2a
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PhylomeDB|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):
kcnh1
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PhylomeDB|SonicParanoid)
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 13 106,253,101 - 106,555,712 (+) NCBI GRCr8 mRatBN7.2 13 103,722,140 - 104,024,762 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 13 103,722,245 - 104,024,740 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 13 106,242,159 - 106,544,653 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 13 107,626,002 - 107,928,502 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 13 104,840,996 - 105,143,620 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 13 110,920,712 - 111,232,291 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 13 110,920,737 - 111,232,269 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 13 115,478,526 - 115,789,705 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 13 108,129,617 - 108,407,815 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 13 108,318,724 - 108,596,919 (+) NCBI Celera 13 103,160,967 - 103,461,850 (+) NCBI Celera Cytogenetic Map 13 q27 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Cellular Component
axolemma (IDA) axon (IDA,IEA) cell projection (IEA) cell surface (IDA) dendrite (IDA,IEA) early endosome membrane (IEA,ISO,ISS) endosome (IEA) intracellular membrane-bounded organelle (ISO) membrane (IEA) monoatomic ion channel complex (IEA) neuronal cell body (IDA) nuclear inner membrane (IDA,IEA) nucleus (IEA) parallel fiber to Purkinje cell synapse (ISO) perikaryon (IEA) perinuclear region of cytoplasm (IDA) plasma membrane (IBA,IDA,IEA,ISO,ISS) postsynaptic density membrane (IDA,IEA,IEP,IMP) postsynaptic membrane (IEA) potassium channel complex (IDA) presynaptic membrane (IDA,IEA) synapse (IEA) voltage-gated potassium channel complex (IBA,ISO,ISS)
1.
Regulation of an ERG K+ current by Src tyrosine kinase.
Cayabyab FS and Schlichter LC, J Biol Chem 2002 Apr 19;277(16):13673-81.
2.
Distal end of carboxyl terminus is not essential for the assembly of rat Eag1 potassium channels.
Chen IH, etal., J Biol Chem. 2011 Aug 5;286(31):27183-96. doi: 10.1074/jbc.M111.233825. Epub 2011 Jun 6.
3.
Functional K(v)10.1 channels localize to the inner nuclear membrane.
Chen Y, etal., PLoS One. 2011 May 3;6(5):e19257. doi: 10.1371/journal.pone.0019257.
4.
The punctate localization of rat Eag1 K+ channels is conferred by the proximal post-CNBHD region.
Chuang CC, etal., BMC Neurosci. 2014 Feb 4;15:23. doi: 10.1186/1471-2202-15-23.
5.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.
Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
6.
Rat ISS GO annotations from GOA human gene data--August 2006
GOA data from the GO Consortium
7.
Characterization of Eag1 channel lateral mobility in rat hippocampal cultures by single-particle-tracking with quantum dots.
Gomez-Varela D, etal., PLoS One. 2010 Jan 25;5(1):e8858. doi: 10.1371/journal.pone.0008858.
8.
Overexpression of Eag1 potassium channels in clinical tumours.
Hemmerlein B, etal., Mol Cancer. 2006 Oct 5;5:41.
9.
KCR1, a membrane protein that facilitates functional expression of non-inactivating K+ currents associates with rat EAG voltage-dependent K+ channels.
Hoshi N, etal., J Biol Chem 1998 Sep 4;273(36):23080-5.
10.
14-3-3theta is a binding partner of rat Eag1 potassium channels.
Hsu PH, etal., PLoS One. 2012;7(7):e41203. doi: 10.1371/journal.pone.0041203. Epub 2012 Jul 20.
11.
Hippocampal ether-a-go-go1 potassium channels blockade: effects in the startle reflex and prepulse inhibition.
Issy AC, etal., Neurosci Lett. 2014 Jan 24;559:13-7. doi: 10.1016/j.neulet.2013.11.026. Epub 2013 Nov 24.
12.
The subfamily-specific assembly of Eag and Erg K+ channels is determined by both the amino and the carboxyl recognition domains.
Lin TF, etal., J Biol Chem. 2014 Aug 15;289(33):22815-34. doi: 10.1074/jbc.M114.574814. Epub 2014 Jul 9.
13.
Functional expression of a rat homologue of the voltage gated either a go-go potassium channel reveals differences in selectivity and activation kinetics between the Drosophila channel and its mammalian counterpart.
Ludwig J, etal., EMBO J 1994 Oct 3;13(19):4451-8.
14.
Eag1 potassium channel immunohistochemistry in the CNS of adult rat and selected regions of human brain.
Martin S, etal., Neuroscience. 2008 Aug 26;155(3):833-44. doi: 10.1016/j.neuroscience.2008.05.019. Epub 2008 Jul 22.
15.
Rat ISS GO annotations from MGI mouse gene data--August 2006
MGD data from the GO Consortium
16.
KV 10.1 opposes activity-dependent increase in Ca²¿ influx into the presynaptic terminal of the parallel fibre-Purkinje cell synapse.
Mortensen LS, etal., J Physiol. 2015 Jan 1;593(1):181-96. doi: 10.1113/jphysiol.2014.281600. Epub 2014 Nov 25.
17.
Electronic Transfer of LocusLink and RefSeq Data
NCBI rat LocusLink and RefSeq merged data July 26, 2002
18.
Physical and functional interaction of KV10.1 with Rabaptin-5 impacts ion channel trafficking.
Ninkovic M, etal., FEBS Lett. 2012 Sep 21;586(19):3077-84. doi: 10.1016/j.febslet.2012.07.055. Epub 2012 Jul 25.
19.
OMIM Disease Annotation Pipeline
OMIM Disease Annotation Pipeline
20.
Expression of voltage-gated potassium channels in human and mouse colonic carcinoma.
Ousingsawat J, etal., Clin Cancer Res. 2007 Feb 1;13(3):824-31.
21.
Purification of an EH domain-binding protein from rat brain that modulates the gating of the rat ether-a-go-go channel.
Piros ET, etal., J Biol Chem. 1999 Nov 19;274(47):33677-83.
22.
GOA pipeline
RGD automated data pipeline
23.
ClinVar Automated Import and Annotation Pipeline
RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
24.
Data Import for Chemical-Gene Interactions
RGD automated import pipeline for gene-chemical interactions
25.
Elevation of intracellular calcium by muscarinic receptor activation induces a block of voltage-activated rat ether-a-go-go channels in a stably transfected cell line.
Stansfeld CE, etal., Proc Natl Acad Sci U S A. 1996 Sep 3;93(18):9910-4.
26.
Tentative Sequence Identification Numbers
Tentative Sequence Data IDs. TIGR Gene Index, Rat Data
27.
Differential expression of potassium ion channels in human renal cell carcinoma.
Wadhwa S, etal., Int Urol Nephrol. 2009;41(2):251-7. doi: 10.1007/s11255-008-9459-z. Epub 2008 Sep 8.
28.
Regulation of Eag1 gating by its intracellular domains.
Whicher JR and MacKinnon R, Elife. 2019 Sep 6;8:e49188. doi: 10.7554/eLife.49188.
29.
Structure of the voltage-gated K(+) channel Eag1 reveals an alternative voltage sensing mechanism.
Whicher JR and MacKinnon R, Science. 2016 Aug 12;353(6300):664-9. doi: 10.1126/science.aaf8070.
Kcnh1 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 13 106,253,101 - 106,555,712 (+) NCBI GRCr8 mRatBN7.2 13 103,722,140 - 104,024,762 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 13 103,722,245 - 104,024,740 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 13 106,242,159 - 106,544,653 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 13 107,626,002 - 107,928,502 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 13 104,840,996 - 105,143,620 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 13 110,920,712 - 111,232,291 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 13 110,920,737 - 111,232,269 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 13 115,478,526 - 115,789,705 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 13 108,129,617 - 108,407,815 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 13 108,318,724 - 108,596,919 (+) NCBI Celera 13 103,160,967 - 103,461,850 (+) NCBI Celera Cytogenetic Map 13 q27 NCBI
KCNH1 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 1 210,678,314 - 211,134,148 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 1 210,676,823 - 211,134,165 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 1 210,851,656 - 211,307,490 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 1 208,923,178 - 209,374,080 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 1 207,244,949 - 207,695,852 NCBI Celera 1 184,078,007 - 184,534,030 (-) NCBI Celera Cytogenetic Map 1 q32.2 NCBI HuRef 1 181,528,354 - 181,984,466 (-) NCBI HuRef CHM1_1 1 212,124,419 - 212,580,029 (-) NCBI CHM1_1 T2T-CHM13v2.0 1 209,920,145 - 210,379,828 (-) NCBI T2T-CHM13v2.0
Kcnh1 Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 1 191,871,759 - 192,192,467 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 1 191,873,082 - 192,192,467 (+) Ensembl GRCm39 Ensembl GRCm38 1 192,189,144 - 192,510,159 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 1 192,190,774 - 192,510,159 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 1 194,014,754 - 194,334,040 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 1 193,891,596 - 194,210,882 (+) NCBI MGSCv36 mm8 Celera 1 199,081,917 - 199,396,846 (+) NCBI Celera Cytogenetic Map 1 H6 NCBI cM Map 1 97.33 NCBI
Kcnh1 Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955489 1,179,053 - 1,545,355 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955489 1,176,615 - 1,549,880 (+) NCBI ChiLan1.0 ChiLan1.0
KCNH1 Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 1 38,274,955 - 38,737,394 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 1 38,239,979 - 38,703,633 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 1 186,233,881 - 186,696,509 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 1 191,102,299 - 191,561,879 (-) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 1 191,107,256 - 191,562,766 (-) Ensembl panpan1.1 panPan2
KCNH1 Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 7 9,317,804 - 9,631,144 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 7 9,252,488 - 9,631,150 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 7 8,829,600 - 9,206,958 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 7 8,949,600 - 9,333,811 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 7 8,954,637 - 9,334,074 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 7 8,881,430 - 9,257,585 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 7 8,973,450 - 9,359,036 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 7 9,110,853 - 9,483,089 (-) NCBI UU_Cfam_GSD_1.0
Kcnh1 Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024409344 64,893,289 - 65,249,587 (+) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936557 2,133,564 - 2,493,155 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936557 2,133,596 - 2,493,170 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
KCNH1 Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 9 131,960,480 - 132,334,953 (+) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 9 131,960,566 - 132,336,029 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 9 145,245,936 - 145,368,735 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
KCNH1 Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 25 18,353,356 - 18,788,472 (+) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 25 18,353,482 - 18,783,592 (+) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666055 18,890,057 - 19,338,331 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Kcnh1
.
Predicted Target Of
Count of predictions: 576 Count of miRNA genes: 249 Interacting mature miRNAs: 318 Transcripts: ENSRNOT00000005209 Prediction methods: Microtar, Miranda, Rnahybrid, Targetscan Result types: miRGate_prediction
7387280 Uae43 Urinary albumin excretion QTL 43 5.69 0.4174 urine albumin amount (VT:0002871) urine albumin excretion rate (CMO:0000757) 13 66451204 106807694 Rat 2293702 Bss34 Bone structure and strength QTL 34 4.61 0.0001 femur strength trait (VT:0010010) femur midshaft polar moment of inertia (CMO:0001669) 13 65103704 106807694 Rat 2293687 Bss26 Bone structure and strength QTL 26 4.6 0.0001 femur morphology trait (VT:0000559) femur cross-sectional area (CMO:0001661) 13 65103704 106807694 Rat 12879475 Bp400 Blood pressure QTL 400 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 13 61825626 106807694 Rat 4889606 Gluco63 Glucose level QTL 63 2.86 0.003 blood glucose amount (VT:0000188) blood glucose level area under curve (AUC) (CMO:0000350) 13 80753256 106807694 Rat
D13Rat90
Rat Assembly Chr Position (strand) Source JBrowse Rnor_6.0 13 110,987,474 - 110,987,854 NCBI Rnor6.0 Rnor_5.0 13 115,544,837 - 115,545,217 UniSTS Rnor5.0 RGSC_v3.4 13 108,161,587 - 108,161,830 RGD RGSC3.4 RGSC_v3.4 13 108,161,588 - 108,161,830 UniSTS RGSC3.4 RGSC_v3.1 13 108,350,605 - 108,350,962 RGD Celera 13 103,218,254 - 103,218,496 UniSTS FHH x ACI Map 13 59.9799 UniSTS FHH x ACI Map 13 59.9799 RGD Cytogenetic Map 13 q27 UniSTS
RH133640
Rat Assembly Chr Position (strand) Source JBrowse GRCr8 13 106,555,328 - 106,555,528 (+) Marker Load Pipeline mRatBN7.2 13 104,024,378 - 104,024,578 (+) MAPPER mRatBN7.2 Rnor_6.0 13 111,231,908 - 111,232,107 NCBI Rnor6.0 Rnor_5.0 13 115,789,322 - 115,789,521 UniSTS Rnor5.0 RGSC_v3.4 13 108,407,454 - 108,407,653 UniSTS RGSC3.4 Celera 13 103,461,489 - 103,461,688 UniSTS Cytogenetic Map 13 q27 UniSTS
BF387220
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 13 103,953,993 - 103,954,181 (+) MAPPER mRatBN7.2 Rnor_6.0 13 111,161,533 - 111,161,720 NCBI Rnor6.0 Rnor_5.0 13 115,718,896 - 115,719,083 UniSTS Rnor5.0 RGSC_v3.4 13 108,337,021 - 108,337,208 UniSTS RGSC3.4 Celera 13 103,391,977 - 103,392,164 UniSTS RH 3.4 Map 13 750.8 UniSTS Cytogenetic Map 13 q27 UniSTS
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
9
11
42
113
80
79
48
25
48
6
200
90
93
45
60
31
Too many to show, limit is 500. Download them if you would like to view them all.
Ensembl Acc Id:
ENSRNOT00000005209 ⟹ ENSRNOP00000005209
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 13 103,722,245 - 104,024,740 (+) Ensembl Rnor_6.0 Ensembl 13 110,920,737 - 111,232,269 (+) Ensembl
Ensembl Acc Id:
ENSRNOT00000076362 ⟹ ENSRNOP00000068448
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source Rnor_6.0 Ensembl 13 110,920,830 - 111,228,836 (+) Ensembl
Ensembl Acc Id:
ENSRNOT00000077014 ⟹ ENSRNOP00000068394
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source Rnor_6.0 Ensembl 13 110,920,830 - 111,228,836 (+) Ensembl
RefSeq Acc Id:
NM_031742 ⟹ NP_113930
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 13 106,253,216 - 106,555,712 (+) NCBI mRatBN7.2 13 103,722,248 - 104,024,762 (+) NCBI Rnor_6.0 13 110,920,737 - 111,232,269 (+) NCBI Rnor_5.0 13 115,478,526 - 115,789,705 (+) NCBI RGSC_v3.4 13 108,129,617 - 108,407,815 (+) RGD Celera 13 103,160,967 - 103,461,850 (+) RGD
Sequence:
GGCACTCGAGCGCACACCCGGGCGGGCCGCAGCGGAGAGGTGCGGAGCGCAGCGAAGGCGGCAGCGGGAGCTAGCCGCCGCCCCTGCGCTCCGGGGCTGCGGGGCGCATGGGGCGCGTGGAGCCGGGA
hide sequence
RefSeq Acc Id:
XM_017598933 ⟹ XP_017454422
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 13 106,253,101 - 106,555,712 (+) NCBI mRatBN7.2 13 103,722,140 - 104,024,762 (+) NCBI Rnor_6.0 13 110,920,712 - 111,232,291 (+) NCBI
Sequence:
TGCGGCCGCCGCACATCGAGCCCGGGGCACTCGAGCGCACACCCGGGCGGGCCGCAGCGGAGAGGTGCGGAGCGCAGCGAAGCGGCAGCGGGAGCTAGCCGCCGCCCCTGCGCTCCGGGGCTGCGGGG
hide sequence
RefSeq Acc Id:
XM_039091086 ⟹ XP_038947014
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 13 106,392,198 - 106,555,712 (+) NCBI mRatBN7.2 13 103,877,572 - 104,024,762 (+) NCBI
RefSeq Acc Id:
XM_063272592 ⟹ XP_063128662
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 13 106,305,469 - 106,555,712 (+) NCBI
RefSeq Acc Id:
XM_063272593 ⟹ XP_063128663
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 13 106,322,768 - 106,555,712 (+) NCBI
RefSeq Acc Id:
NP_113930 ⟸ NM_031742
- UniProtKB:
Q63472 (UniProtKB/Swiss-Prot), A6JH11 (UniProtKB/TrEMBL)
- Sequence:
MTMAGGRRGLVAPQNTFLENIVRRSNDTNFVLGNAQIVDWPIVYSNDGFCKLSGYHRAEVMQKSSACSFMYGELTDKDTVEKVRQTFENYEMNSFEILMYKKNRTPVWFFVKIAPIRNEQDKVVLFLC
hide sequence
RefSeq Acc Id:
XP_017454422 ⟸ XM_017598933
- Peptide Label:
isoform X1
- UniProtKB:
A0A8L2Q1G4 (UniProtKB/TrEMBL), A6JH10 (UniProtKB/TrEMBL)
- Sequence:
MTMAGGRRGLVAPQNTFLENIVRRSNDTNFVLGNAQIVDWPIVYSNDGFCKLSGYHRAEVMQKSSACSFMYGELTDKDTVEKVRQTFENYEMNSFEILMYKKNRTPVWFFVKIAPIRNEQDKVVLFLC
hide sequence
Ensembl Acc Id:
ENSRNOP00000068394 ⟸ ENSRNOT00000077014
Ensembl Acc Id:
ENSRNOP00000005209 ⟸ ENSRNOT00000005209
Ensembl Acc Id:
ENSRNOP00000068448 ⟸ ENSRNOT00000076362
RefSeq Acc Id:
XP_038947014 ⟸ XM_039091086
- Peptide Label:
isoform X3
RefSeq Acc Id:
XP_063128662 ⟸ XM_063272592
- Peptide Label:
isoform X2
RefSeq Acc Id:
XP_063128663 ⟸ XM_063272593
- Peptide Label:
isoform X2
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2016-03-09
Kcnh1
potassium voltage-gated channel subfamily H member 1
Kcnh1
potassium channel, voltage gated eag related subfamily H, member 1
Nomenclature updated to reflect human and mouse nomenclature
1299863 APPROVED
2015-01-26
Kcnh1
potassium channel, voltage gated eag related subfamily H, member 1
Kcnh1
potassium voltage-gated channel, subfamily H (eag-related), member 1
Nomenclature updated to reflect human and mouse nomenclature
1299863 APPROVED
2002-06-10
Kcnh1
potassium voltage-gated channel, subfamily H (eag-related), member 1
Name updated
70584 APPROVED
Note Type
Note
Reference
gene_expression
expressed in the central nervous system
68271
