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Gene: Slc6a15 (solute carrier family 6 member 15) Rattus norvegicus

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Symbol:

Slc6a15

Name:

solute carrier family 6 member 15

RGD ID:

628664

Description:

Predicted to enable branched-chain amino acid:sodium symporter activity; neutral L-amino acid:sodium symporter activity; and proline:sodium symporter activity. Predicted to be involved in L-leucine transport; proline transport; and sodium ion transmembrane transport. Predicted to be located in membrane. Predicted to be active in plasma membrane. Orthologous to human SLC6A15 (solute carrier family 6 member 15); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; ammonium chloride; bisphenol A.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

Ntt73; orphan sodium- and chloride-dependent neurotransmitter transporter NTT73; orphan transporter v7-3; sodium- and chloride-dependent neurotransmitter transporter NTT73; sodium-dependent neutral amino acid transporter B(0)AT2; solute carrier family 6 (neurotransmitter transporter), member 15; solute carrier family 6 (neutral amino acid transporter), member 15; transporter v7-3

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	40,439,607 - 40,493,788 (+)	NCBI		GRCr8
mRatBN7.2	7	38,553,055 - 38,607,239 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	38,553,196 - 38,607,239 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	40,490,690 - 40,544,721 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	42,693,756 - 42,747,787 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	42,468,678 - 42,522,713 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	45,328,207 - 45,381,920 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	45,328,105 - 45,382,229 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	45,348,955 - 45,402,668 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	41,498,013 - 41,552,028 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	7	41,518,322 - 41,572,299 (+)	NCBI
Celera	7	35,501,267 - 35,556,333 (+)	NCBI		Celera
Cytogenetic Map	7	q21	NCBI

JBrowse:

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Model

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Slc6a15	Rat	(+)-catechin	multiple interactions	ISO	RGD:735866	6480464	[Catechin co-treated with Grape Seed Proanthocyanidins] results in decreased expression of SLC6A15 mRNA	CTD	PMID:24763279
Slc6a15	Rat	(2,4,5-trichlorophenoxy)acetic acid	decreases expression	ISO	RGD:735867	6480464	2,4,5-Trichlorophenoxyacetic Acid results in decreased expression of SLC6A15 mRNA	CTD	PMID:18579281
Slc6a15	Rat	1,1-dichloroethene	decreases expression	ISO	RGD:735867	6480464	vinylidene chloride results in decreased expression of SLC6A15 mRNA	CTD	PMID:26682919
Slc6a15	Rat	1-[3-(dimethylamino)propyl]-1-(4-fluorophenyl)-1,3-dihydro-2-benzofuran-5-carbonitrile	multiple interactions	ISO	RGD:735867	6480464	[Citalopram co-treated with Caffeine] results in decreased expression of SLC6A15 mRNA	CTD	PMID:29107002
Slc6a15	Rat	17beta-estradiol	increases expression	ISO	RGD:735866	6480464	Estradiol results in increased expression of SLC6A15 mRNA	CTD	PMID:36828454
Slc6a15	Rat	2,3,7,8-tetrachlorodibenzodioxine	affects expression	ISO	RGD:735867	6480464	Tetrachlorodibenzodioxin affects the expression of SLC6A15 mRNA	CTD	PMID:21570461
Slc6a15	Rat	2,3,7,8-tetrachlorodibenzodioxine	increases expression	EXP		6480464	Tetrachlorodibenzodioxin results in increased expression of SLC6A15 mRNA	CTD	PMID:33387578
Slc6a15	Rat	2,4-dibromophenyl 2,4,5-tribromophenyl ether	increases expression	ISO	RGD:735866	6480464	2,2',4,4',5-brominated diphenyl ether results in increased expression of SLC6A15 mRNA	CTD	PMID:26705709
Slc6a15	Rat	2-palmitoylglycerol	increases expression	ISO	RGD:735866	6480464	2-palmitoylglycerol results in increased expression of SLC6A15 mRNA	CTD	PMID:37199045
Slc6a15	Rat	aflatoxin B1	decreases methylation	ISO	RGD:735866	6480464	Aflatoxin B1 results in decreased methylation of SLC6A15 gene	CTD	PMID:27153756
Slc6a15	Rat	agomelatine	multiple interactions	ISO	RGD:735867	6480464	[Caffeine co-treated with agomelatine] results in decreased expression of SLC6A15 mRNA	CTD	PMID:29882086
Slc6a15	Rat	all-trans-retinoic acid	decreases expression	ISO	RGD:735866	6480464	Tretinoin results in decreased expression of SLC6A15 mRNA	CTD	PMID:23724009
Slc6a15	Rat	all-trans-retinoic acid	multiple interactions	ISO	RGD:735867	6480464	[mono-(2-ethylhexyl)phthalate co-treated with Tretinoin] results in decreased expression of SLC6A15 mRNA	CTD	PMID:36189433
Slc6a15	Rat	ammonium chloride	affects expression	EXP		6480464	Ammonium Chloride affects the expression of SLC6A15 mRNA	CTD	PMID:16483693
Slc6a15	Rat	aristolochic acid A	decreases expression	ISO	RGD:735866	6480464	aristolochic acid I results in decreased expression of SLC6A15 mRNA	CTD	PMID:33212167
Slc6a15	Rat	benzo[a]pyrene	decreases expression	ISO	RGD:735867	6480464	Benzo(a)pyrene results in decreased expression of SLC6A15 mRNA	CTD	PMID:22228805
Slc6a15	Rat	benzo[a]pyrene	affects methylation	ISO	RGD:735866	6480464	Benzo(a)pyrene affects the methylation of SLC6A15 5' UTR; Benzo(a)pyrene affects the methylation of SLC6A15 promoter	CTD	PMID:27901495
Slc6a15	Rat	benzo[a]pyrene	increases methylation	ISO	RGD:735866	6480464	Benzo(a)pyrene results in increased methylation of SLC6A15 exon	CTD	PMID:27901495
Slc6a15	Rat	bis(2-ethylhexyl) phthalate	multiple interactions	ISO	RGD:735867	6480464	[Streptozocin co-treated with Diethylhexyl Phthalate] results in decreased expression of SLC6A15 mRNA	CTD	PMID:31606821
Slc6a15	Rat	bisphenol A	decreases expression	ISO	RGD:735866	6480464	bisphenol A results in decreased expression of SLC6A15 mRNA	CTD	PMID:20678512
Slc6a15	Rat	bisphenol A	multiple interactions	ISO	RGD:735866	6480464	[bisphenol A co-treated with Fulvestrant] results in increased methylation of SLC6A15 gene	CTD	PMID:31601247
Slc6a15	Rat	bisphenol A	increases methylation	ISO	RGD:735866	6480464	bisphenol A results in increased methylation of SLC6A15 gene	CTD	PMID:31601247
Slc6a15	Rat	bisphenol A	increases methylation	EXP		6480464	bisphenol A results in increased methylation of SLC6A15 gene	CTD	PMID:28505145
Slc6a15	Rat	bisphenol A	increases expression	ISO	RGD:735866	6480464	bisphenol A results in increased expression of SLC6A15 mRNA	CTD	PMID:27685785\|PMID:29275510\|PMID:36828454
Slc6a15	Rat	bisphenol A	decreases expression	EXP		6480464	bisphenol A results in decreased expression of SLC6A15 mRNA	CTD	PMID:25181051\|PMID:31129395
Slc6a15	Rat	bleomycin A2	decreases expression	ISO	RGD:735867	6480464	Bleomycin results in decreased expression of SLC6A15 mRNA	CTD	PMID:30825431
Slc6a15	Rat	bleomycin A2	multiple interactions	ISO	RGD:735867	6480464	Cannabidiol analog inhibits the reaction [Bleomycin results in decreased expression of SLC6A15 mRNA]; lenabasum inhibits more ...	CTD	PMID:30825431
Slc6a15	Rat	butanal	increases expression	ISO	RGD:735866	6480464	butyraldehyde results in increased expression of SLC6A15 mRNA	CTD	PMID:26079696
Slc6a15	Rat	cadmium dichloride	decreases expression	ISO	RGD:735866	6480464	Cadmium Chloride results in decreased expression of SLC6A15 mRNA	CTD	PMID:38568856
Slc6a15	Rat	caffeine	multiple interactions	ISO	RGD:735867	6480464	[Caffeine co-treated with agomelatine] results in decreased expression of SLC6A15 mRNA; [Caffeine co-treated with Mianserin] more ...	CTD	PMID:29107002\|PMID:29882086
Slc6a15	Rat	cannabidiol	multiple interactions	ISO	RGD:735867	6480464	Cannabidiol analog inhibits the reaction [Bleomycin results in decreased expression of SLC6A15 mRNA]	CTD	PMID:30825431
Slc6a15	Rat	chloroprene	increases expression	ISO	RGD:735867	6480464	Chloroprene results in increased expression of SLC6A15 mRNA	CTD	PMID:23125180
Slc6a15	Rat	cisplatin	multiple interactions	ISO	RGD:735866	6480464	Cisplatin inhibits the reaction [Piroxicam results in decreased expression of SLC6A15 mRNA]	CTD	PMID:21858171
Slc6a15	Rat	cisplatin	decreases expression	ISO	RGD:735866	6480464	Cisplatin results in decreased expression of SLC6A15 mRNA	CTD	PMID:27392435
Slc6a15	Rat	citalopram	multiple interactions	ISO	RGD:735867	6480464	[Citalopram co-treated with Caffeine] results in decreased expression of SLC6A15 mRNA	CTD	PMID:29107002
Slc6a15	Rat	copper(II) sulfate	decreases expression	ISO	RGD:735867	6480464	Copper Sulfate results in decreased expression of SLC6A15 mRNA	CTD	PMID:18579281
Slc6a15	Rat	corticosterone	multiple interactions	ISO	RGD:735867	6480464	Edaravone inhibits the reaction [Corticosterone results in decreased expression of SLC6A15 mRNA]; Paroxetine inhibits the more ...	CTD	PMID:31344373
Slc6a15	Rat	corticosterone	decreases expression	ISO	RGD:735867	6480464	Corticosterone results in decreased expression of SLC6A15 mRNA	CTD	PMID:31344373
Slc6a15	Rat	Cuprizon	decreases expression	EXP		6480464	Cuprizone results in decreased expression of SLC6A15 mRNA	CTD	PMID:26577399
Slc6a15	Rat	cyclosporin A	decreases methylation	ISO	RGD:735866	6480464	Cyclosporine results in decreased methylation of SLC6A15 promoter	CTD	PMID:27989131
Slc6a15	Rat	dichlorine	multiple interactions	EXP		6480464	[Ozone co-treated with Chlorine] results in increased expression of SLC6A15 mRNA	CTD	PMID:18636392
Slc6a15	Rat	diquat	decreases expression	ISO	RGD:735867	6480464	Diquat results in decreased expression of SLC6A15 mRNA	CTD	PMID:36851058
Slc6a15	Rat	dorsomorphin	multiple interactions	ISO	RGD:735866	6480464	[NOG protein co-treated with mercuric bromide co-treated with dorsomorphin co-treated with 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased more ...	CTD	PMID:27188386
Slc6a15	Rat	edaravone	multiple interactions	ISO	RGD:735867	6480464	Edaravone inhibits the reaction [Corticosterone results in decreased expression of SLC6A15 mRNA]	CTD	PMID:31344373
Slc6a15	Rat	endosulfan	increases expression	EXP		6480464	Endosulfan results in increased expression of SLC6A15 mRNA	CTD	PMID:29391264
Slc6a15	Rat	fenfluramine	increases expression	ISO	RGD:735866	6480464	Fenfluramine results in increased expression of SLC6A15 mRNA	CTD	PMID:22140631
Slc6a15	Rat	fluoxetine	multiple interactions	ISO	RGD:735867	6480464	[Fluoxetine co-treated with Caffeine] results in decreased expression of SLC6A15 mRNA	CTD	PMID:29107002
Slc6a15	Rat	folic acid	decreases expression	ISO	RGD:735867	6480464	Folic Acid results in decreased expression of SLC6A15 mRNA	CTD	PMID:25629700
Slc6a15	Rat	FR900359	affects phosphorylation	ISO	RGD:735866	6480464	FR900359 affects the phosphorylation of SLC6A15 protein	CTD	PMID:37730182
Slc6a15	Rat	fulvestrant	multiple interactions	ISO	RGD:735866	6480464	[bisphenol A co-treated with Fulvestrant] results in increased methylation of SLC6A15 gene	CTD	PMID:31601247
Slc6a15	Rat	gentamycin	increases expression	EXP		6480464	Gentamicins results in increased expression of SLC6A15 mRNA	CTD	PMID:33387578
Slc6a15	Rat	hydrazine	decreases expression	ISO	RGD:735867	6480464	hydrazine results in decreased expression of SLC6A15 mRNA	CTD	PMID:15282401
Slc6a15	Rat	Licochalcone B	decreases expression	ISO	RGD:735866	6480464	licochalcone B results in decreased expression of SLC6A15 mRNA	CTD	PMID:33647349
Slc6a15	Rat	mercury dibromide	decreases expression	ISO	RGD:735866	6480464	mercuric bromide results in decreased expression of SLC6A15 mRNA	CTD	PMID:26272509
Slc6a15	Rat	mercury dibromide	multiple interactions	ISO	RGD:735866	6480464	[NOG protein co-treated with mercuric bromide co-treated with dorsomorphin co-treated with 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased more ...	CTD	PMID:27188386
Slc6a15	Rat	methylmercury chloride	decreases expression	ISO	RGD:735866	6480464	methylmercuric chloride results in decreased expression of SLC6A15 mRNA	CTD	PMID:23179753\|PMID:27188386
Slc6a15	Rat	methylmercury chloride	increases expression	ISO	RGD:735866	6480464	methylmercuric chloride results in increased expression of SLC6A15 mRNA	CTD	PMID:28001369
Slc6a15	Rat	mianserin	multiple interactions	ISO	RGD:735867	6480464	[Caffeine co-treated with Mianserin] results in decreased expression of SLC6A15 mRNA	CTD	PMID:29882086
Slc6a15	Rat	mono(2-ethylhexyl) phthalate	multiple interactions	ISO	RGD:735867	6480464	[mono-(2-ethylhexyl)phthalate co-treated with Tretinoin] results in decreased expression of SLC6A15 mRNA	CTD	PMID:36189433
Slc6a15	Rat	N-methyl-4-phenylpyridinium	increases expression	ISO	RGD:735866	6480464	1-Methyl-4-phenylpyridinium results in increased expression of SLC6A15 mRNA	CTD	PMID:24810058
Slc6a15	Rat	okadaic acid	decreases expression	ISO	RGD:735866	6480464	Okadaic Acid results in decreased expression of SLC6A15 mRNA	CTD	PMID:38832940
Slc6a15	Rat	ozone	multiple interactions	EXP		6480464	[Ozone co-treated with Chlorine] results in increased expression of SLC6A15 mRNA	CTD	PMID:18636392
Slc6a15	Rat	ozone	multiple interactions	ISO	RGD:735867	6480464	[Air Pollutants results in increased abundance of Ozone] which results in increased expression of SLC6A15 more ...	CTD	PMID:34911549
Slc6a15	Rat	paracetamol	increases expression	ISO	RGD:735867	6480464	Acetaminophen results in increased expression of SLC6A15 mRNA	CTD	PMID:17585979
Slc6a15	Rat	paroxetine	multiple interactions	ISO	RGD:735867	6480464	Paroxetine inhibits the reaction [Corticosterone results in decreased expression of SLC6A15 mRNA]	CTD	PMID:31344373
Slc6a15	Rat	PD 0325901	multiple interactions	ISO	RGD:735866	6480464	[mirdametinib co-treated with (+)-JQ1 compound] results in decreased expression of SLC6A15 mRNA	CTD	PMID:25119042
Slc6a15	Rat	PD 0325901	decreases expression	ISO	RGD:735866	6480464	mirdametinib results in decreased expression of SLC6A15 mRNA	CTD	PMID:25119042
Slc6a15	Rat	pentanal	increases expression	ISO	RGD:735866	6480464	pentanal results in increased expression of SLC6A15 mRNA	CTD	PMID:26079696
Slc6a15	Rat	perfluorooctane-1-sulfonic acid	increases expression	ISO	RGD:735866	6480464	perfluorooctane sulfonic acid results in increased expression of SLC6A15 mRNA	CTD	PMID:36864359
Slc6a15	Rat	perfluorooctanoic acid	increases expression	ISO	RGD:735866	6480464	perfluorooctanoic acid results in increased expression of SLC6A15 mRNA	CTD	PMID:37302725
Slc6a15	Rat	phenylmercury acetate	decreases expression	ISO	RGD:735866	6480464	Phenylmercuric Acetate results in decreased expression of SLC6A15 mRNA	CTD	PMID:26272509
Slc6a15	Rat	phenylmercury acetate	multiple interactions	ISO	RGD:735866	6480464	[NOG protein co-treated with Phenylmercuric Acetate co-treated with dorsomorphin co-treated with 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased more ...	CTD	PMID:27188386
Slc6a15	Rat	pioglitazone	multiple interactions	ISO	RGD:735867	6480464	[N-nitroso-tris-chloroethylurea co-treated with pioglitazone] results in decreased expression of SLC6A15 mRNA	CTD	PMID:27935865
Slc6a15	Rat	piroxicam	multiple interactions	ISO	RGD:735866	6480464	Cisplatin inhibits the reaction [Piroxicam results in decreased expression of SLC6A15 mRNA]	CTD	PMID:21858171
Slc6a15	Rat	piroxicam	decreases expression	ISO	RGD:735866	6480464	Piroxicam results in decreased expression of SLC6A15 mRNA	CTD	PMID:21858171
Slc6a15	Rat	potassium chromate	increases expression	ISO	RGD:735866	6480464	potassium chromate(VI) results in increased expression of SLC6A15 mRNA	CTD	PMID:22714537
Slc6a15	Rat	propanal	increases expression	ISO	RGD:735866	6480464	propionaldehyde results in increased expression of SLC6A15 mRNA	CTD	PMID:26079696
Slc6a15	Rat	sarin	decreases expression	ISO	RGD:735866	6480464	Sarin results in decreased expression of SLC6A15 mRNA	CTD	PMID:19522546
Slc6a15	Rat	SB 431542	multiple interactions	ISO	RGD:735866	6480464	[NOG protein co-treated with mercuric bromide co-treated with dorsomorphin co-treated with 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased more ...	CTD	PMID:27188386
Slc6a15	Rat	silicon dioxide	increases expression	ISO	RGD:735866	6480464	Silicon Dioxide analog results in increased expression of SLC6A15 mRNA	CTD	PMID:25895662
Slc6a15	Rat	silicon dioxide	decreases expression	ISO	RGD:735866	6480464	Silicon Dioxide results in decreased expression of SLC6A15 mRNA	CTD	PMID:25351596
Slc6a15	Rat	silver atom	decreases expression	ISO	RGD:735867	6480464	Silver results in decreased expression of SLC6A15 mRNA	CTD	PMID:27131904
Slc6a15	Rat	silver(0)	decreases expression	ISO	RGD:735867	6480464	Silver results in decreased expression of SLC6A15 mRNA	CTD	PMID:27131904
Slc6a15	Rat	sodium arsenite	decreases expression	ISO	RGD:735866	6480464	sodium arsenite results in decreased expression of SLC6A15 mRNA	CTD	PMID:38568856
Slc6a15	Rat	sodium arsenite	decreases expression	ISO	RGD:735867	6480464	sodium arsenite results in decreased expression of SLC6A15 mRNA	CTD	PMID:37682722
Slc6a15	Rat	sodium fluoride	increases expression	EXP		6480464	Sodium Fluoride results in increased expression of SLC6A15 mRNA	CTD	PMID:27257137
Slc6a15	Rat	streptozocin	increases expression	ISO	RGD:735867	6480464	Streptozocin results in increased expression of SLC6A15 mRNA	CTD	PMID:31606821
Slc6a15	Rat	streptozocin	multiple interactions	ISO	RGD:735867	6480464	[Streptozocin co-treated with Diethylhexyl Phthalate] results in decreased expression of SLC6A15 mRNA	CTD	PMID:31606821
Slc6a15	Rat	temozolomide	decreases expression	ISO	RGD:735866	6480464	Temozolomide results in decreased expression of SLC6A15 mRNA	CTD	PMID:31758290
Slc6a15	Rat	Tesaglitazar	increases expression	EXP		6480464	tesaglitazar results in increased expression of SLC6A15 mRNA	CTD	PMID:21515302
Slc6a15	Rat	thiram	decreases expression	ISO	RGD:735866	6480464	Thiram results in decreased expression of SLC6A15 mRNA	CTD	PMID:38568856
Slc6a15	Rat	titanium dioxide	decreases expression	ISO	RGD:735867	6480464	titanium dioxide results in decreased expression of SLC6A15 mRNA	CTD	PMID:29264374
Slc6a15	Rat	titanium dioxide	decreases methylation	ISO	RGD:735867	6480464	titanium dioxide results in decreased methylation of SLC6A15 promoter	CTD	PMID:35295148
Slc6a15	Rat	tributylstannane	decreases expression	EXP		6480464	tributyltin results in decreased expression of SLC6A15 mRNA	CTD	PMID:31129395
Slc6a15	Rat	trichloroethene	increases expression	EXP		6480464	Trichloroethylene results in increased expression of SLC6A15 mRNA	CTD	PMID:33387578
Slc6a15	Rat	trichostatin A	increases expression	ISO	RGD:735866	6480464	trichostatin A results in increased expression of SLC6A15 mRNA	CTD	PMID:24935251
Slc6a15	Rat	triclosan	increases expression	ISO	RGD:735866	6480464	Triclosan results in increased expression of SLC6A15 mRNA	CTD	PMID:30510588
Slc6a15	Rat	valproic acid	affects expression	ISO	RGD:735866	6480464	Valproic Acid affects the expression of SLC6A15 mRNA	CTD	PMID:23179753\|PMID:25979313
Slc6a15	Rat	valproic acid	decreases expression	ISO	RGD:735866	6480464	Valproic Acid results in decreased expression of SLC6A15 mRNA	CTD	PMID:28001369
Slc6a15	Rat	valproic acid	increases expression	ISO	RGD:735866	6480464	Valproic Acid results in increased expression of SLC6A15 mRNA	CTD	PMID:24935251\|PMID:27188386
Slc6a15	Rat	vorinostat	multiple interactions	ISO	RGD:735866	6480464	[NOG protein co-treated with Vorinostat co-treated with dorsomorphin co-treated with 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression more ...	CTD	PMID:27188386
Slc6a15	Rat	vorinostat	increases expression	ISO	RGD:735866	6480464	vorinostat results in increased expression of SLC6A15 mRNA	CTD	PMID:26272509
Slc6a15	Rat	zearalenone	increases expression	ISO	RGD:735866	6480464	Zearalenone results in increased expression of SLC6A15 mRNA	CTD	PMID:36828454

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Slc6a15	Rat	amino acid transport	involved_in	IEA	UniProtKB-KW:KW-0029	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Slc6a15	Rat	carboxylic acid transmembrane transport	involved_in	IEA	GO:0005298	1600115	GO_REF:0000108	GOC	GO_REF:0000108
Slc6a15	Rat	L-leucine transport	involved_in	ISO	RGD:735867	1624291	PMID:17931606	RGD	PMID:17931606
Slc6a15	Rat	L-leucine transport	involved_in	IBA	MGI:2143484\|PANTHER:PTN002614433	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Slc6a15	Rat	L-leucine transport	involved_in	IEA	UniProtKB:Q8BG16\|ensembl:ENSMUSP00000073829	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Slc6a15	Rat	monoatomic ion transport	involved_in	IEA	UniProtKB-KW:KW-0406	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Slc6a15	Rat	neurotransmitter transport	involved_in	IEA	UniProtKB-KW:KW-0532	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Slc6a15	Rat	neutral amino acid transport	involved_in	ISO	RGD:735866	1624291	PMID:16226721	RGD	PMID:16226721
Slc6a15	Rat	neutral amino acid transport	involved_in	IEA	UniProtKB:Q8BG16\|ensembl:ENSMUSP00000073829	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Slc6a15	Rat	neutral amino acid transport	involved_in	IEA	UniProtKB:Q9H2J7\|ensembl:ENSP00000266682	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Slc6a15	Rat	neutral amino acid transport	involved_in	ISS	UniProtKB:Q8BG16	1600115	GO_REF:0000024	UniProt	GO_REF:0000024
Slc6a15	Rat	neutral amino acid transport	involved_in	ISO	RGD:735867	1624291	PMID:17931606	RGD	PMID:17931606
Slc6a15	Rat	neutral amino acid transport	involved_in	ISS	UniProtKB:Q9H2J7	1600115	GO_REF:0000024	UniProt	GO_REF:0000024
Slc6a15	Rat	proline transport	involved_in	IEA	UniProtKB:Q8BG16\|ensembl:ENSMUSP00000073829	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Slc6a15	Rat	proline transport	involved_in	ISO	RGD:735867	1624291	PMID:17931606	RGD	PMID:17931606
Slc6a15	Rat	sodium ion transmembrane transport	involved_in	IBA	PANTHER:PTN000177662\|UniProtKB:P30531	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Slc6a15	Rat	sodium ion transport	involved_in	IEA	UniProtKB-KW:KW-0739	1600115	GO_REF:0000043	UniProt	GO_REF:0000043

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Slc6a15	Rat	membrane	located_in	IEA	UniProtKB:Q9H2J7\|ensembl:ENSP00000266682	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Slc6a15	Rat	membrane	located_in	IEA	UniProtKB-KW:KW-0472	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Slc6a15	Rat	membrane	located_in	IEA	UniProtKB:Q8BG16\|ensembl:ENSMUSP00000073829	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Slc6a15	Rat	membrane	located_in	IEA	InterPro:IPR000175	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Slc6a15	Rat	membrane	located_in	IEA	UniProtKB-SubCell:SL-0162	1600115	GO_REF:0000044	UniProt	GO_REF:0000044
Slc6a15	Rat	membrane	located_in	ISO	RGD:735867	1624291	PMID:16185194	RGD	PMID:16185194
Slc6a15	Rat	membrane	located_in	ISO	RGD:735866	1624291	PMID:16226721	RGD	PMID:16226721
Slc6a15	Rat	membrane	located_in	ISS	UniProtKB:Q9H2J7	1600115	GO_REF:0000024	UniProt	GO_REF:0000024
Slc6a15	Rat	plasma membrane	is_active_in	IBA	FB:FBgn0011603\|FB:FBgn0034136\|FB:FBgn0035969\|FB:FBgn0039915\|MGI:1336891\|MGI:1336892\|MGI:1890216\|MGI:1921588\|MGI:2143217\|MGI:95627\|MGI:95628\|MGI:95629\|MGI:95760\|MGI:98488\|PANTHER:PTN000177662\|RGD:1561810\|RGD:3714\|RGD:3715\|RGD:61912\|RGD:619711\|RGD:620533\|RGD:620788\|RGD:620928\|RGD:621243\|RGD:621822\|RGD:621824\|RGD:628737\|UniProtKB:P23975\|UniProtKB:P30531\|UniProtKB:P31641\|UniProtKB:P31645\|UniProtKB:P48029\|UniProtKB:P48067\|UniProtKB:Q01959\|UniProtKB:Q695T7\|UniProtKB:Q9NP91\|UniProtKB:Q9NSD5\|UniProtKB:Q9XT49\|UniProtKB:Q9Y345\|WB:WBGene00000934\|WB:WBGene00004909	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Slc6a15	Rat	plasma membrane	located_in	IEA	InterPro:IPR002438	1600115	GO_REF:0000002	InterPro	GO_REF:0000002

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Slc6a15	Rat	branched-chain amino acid:sodium symporter activity	enables	ISO	RGD:735866	1624291	PMID:16226721	RGD	PMID:16226721
Slc6a15	Rat	branched-chain amino acid:sodium symporter activity	enables	IEA	UniProtKB:Q9H2J7\|ensembl:ENSP00000266682	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Slc6a15	Rat	branched-chain amino acid:sodium symporter activity	enables	ISO	RGD:735867	1624291	PMID:16185194	RGD	PMID:16185194
Slc6a15	Rat	branched-chain amino acid:sodium symporter activity	enables	IEA	UniProtKB:Q8BG16\|ensembl:ENSMUSP00000073829	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Slc6a15	Rat	branched-chain amino acid:sodium symporter activity	enables	ISS	UniProtKB:Q9H2J7	1600115	GO_REF:0000024	UniProt	GO_REF:0000024
Slc6a15	Rat	neutral L-amino acid:sodium symporter activity	enables	ISS	UniProtKB:Q9H2J7	1600115	GO_REF:0000024	UniProt	GO_REF:0000024
Slc6a15	Rat	neutral L-amino acid:sodium symporter activity	enables	IEA	UniProtKB:Q8BG16\|ensembl:ENSMUSP00000073829	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Slc6a15	Rat	neutral L-amino acid:sodium symporter activity	enables	IEA	UniProtKB:Q9H2J7\|ensembl:ENSP00000266682	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Slc6a15	Rat	neutral L-amino acid:sodium symporter activity	enables	ISO	RGD:735867	1624291	PMID:16185194	RGD	PMID:16185194
Slc6a15	Rat	neutral L-amino acid:sodium symporter activity	enables	ISO	RGD:735866	1624291	PMID:16226721	RGD	PMID:16226721
Slc6a15	Rat	proline:sodium symporter activity	enables	ISO	RGD:735867	1624291	PMID:17931606	RGD	PMID:17931606
Slc6a15	Rat	proline:sodium symporter activity	enables	IEA	UniProtKB:Q8BG16\|ensembl:ENSMUSP00000073829	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Slc6a15	Rat	proline:sodium symporter activity	enables	IBA	MGI:2143484\|PANTHER:PTN002614433	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Slc6a15	Rat	proline:sodium symporter activity	enables	ISS	UniProtKB:Q8BG16	1600115	GO_REF:0000024	UniProt	GO_REF:0000024
Slc6a15	Rat	protein binding	enables	ISO	RGD:735866	1624291	UniProtKB:O75084\|UniProtKB:Q8IXM6\|UniProtKB:Q96JW4\|UniProtKB:Q9H2L4\|UniProtKB:Q9NVC3 PMID:32296183	RGD	PMID:32296183
Slc6a15	Rat	symporter activity	enables	IEA	UniProtKB-KW:KW-0769	1600115	GO_REF:0000043	UniProt	GO_REF:0000043

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	GOA pipeline	RGD automated data pipeline
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

PMID:1363329	PMID:16226721	PMID:17931606	PMID:19147495

Slc6a15
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	40,439,607 - 40,493,788 (+)	NCBI		GRCr8
mRatBN7.2	7	38,553,055 - 38,607,239 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	38,553,196 - 38,607,239 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	40,490,690 - 40,544,721 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	42,693,756 - 42,747,787 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	42,468,678 - 42,522,713 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	45,328,207 - 45,381,920 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	45,328,105 - 45,382,229 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	45,348,955 - 45,402,668 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	41,498,013 - 41,552,028 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	7	41,518,322 - 41,572,299 (+)	NCBI
Celera	7	35,501,267 - 35,556,333 (+)	NCBI		Celera
Cytogenetic Map	7	q21	NCBI

SLC6A15
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	12	84,859,491 - 84,912,799 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	12	84,859,491 - 84,913,629 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	12	85,253,270 - 85,306,578 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	83,777,398 - 83,830,705 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	12	83,777,098 - 83,809,042	NCBI
Celera	12	84,916,853 - 84,970,192 (-)	NCBI		Celera
Cytogenetic Map	12	q21.31	NCBI
HuRef	12	82,310,425 - 82,363,775 (-)	NCBI		HuRef
CHM1_1	12	85,218,075 - 85,271,562 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	12	84,838,955 - 84,892,203 (-)	NCBI		T2T-CHM13v2.0

Slc6a15
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	103,203,320 - 103,255,240 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	103,203,644 - 103,255,238 (+)	Ensembl		GRCm39 Ensembl
GRCm38	10	103,367,808 - 103,419,379 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	103,367,783 - 103,419,377 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	10	102,830,477 - 102,882,011 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	10	102,797,531 - 102,849,065 (+)	NCBI		MGSCv36	mm8
Celera	10	105,308,965 - 105,360,380 (+)	NCBI		Celera
Cytogenetic Map	10	D1	NCBI
cM Map	10	53.98	NCBI

Slc6a15
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955405	22,821,835 - 22,875,398 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955405	22,821,931 - 22,846,420 (-)	NCBI	ChiLan1.0	ChiLan1.0

SLC6A15
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	10	92,905,140 - 92,962,305 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	12	92,905,335 - 92,958,703 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	82,379,018 - 82,432,243 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	12	85,481,700 - 85,534,716 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	12	85,463,088 - 85,534,711 (-)	Ensembl	panpan1.1		panPan2

SLC6A15
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	15	26,486,828 - 26,528,885 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	15	26,486,815 - 26,529,483 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	15	26,922,759 - 26,967,810 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	15	26,997,359 - 27,042,704 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	15	26,997,048 - 27,120,117 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	15	26,445,335 - 26,490,617 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	15	26,485,762 - 26,530,970 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	15	26,734,481 - 26,779,780 (-)	NCBI		UU_Cfam_GSD_1.0

Slc6a15
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	33,747,392 - 33,796,488 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936507	2,438,934 - 2,488,005 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936507	2,438,947 - 2,488,005 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SLC6A15
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	97,092,925 - 97,148,602 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	5	97,093,197 - 97,148,606 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	5	102,102,525 - 102,136,297 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SLC6A15
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	11	80,256,858 - 80,309,272 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	11	80,256,498 - 80,309,158 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666037	165,026,030 - 165,093,792 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Slc6a15
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624837	4,026,167 - 4,059,975 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624837	4,026,857 - 4,082,871 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in Slc6a15
437 total Variants

Predicted Target Of

	Summary Value
Count of predictions:	426
Count of miRNA genes:	240
Interacting mature miRNAs:	296
Transcripts:	ENSRNOT00000029208
Prediction methods:	Microtar, Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1354644	Spl4	Serum phospholipid level QTL 4	4.9		blood phospholipid amount (VT:0006084)	blood phospholipid level (CMO:0001169)	7	19654317	49753746	Rat
7411569	Bw137	Body weight QTL 137		0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	7	21921195	66921195	Rat
9590102	Sffal5	Serum free fatty acids level QTL 5	8.62	0.001	blood free fatty acid amount (VT:0001553)	plasma free fatty acids level (CMO:0000546)	7	5329019	50329019	Rat
1578652	Bmd15	Bone mineral density QTL 15	5.2		femur mineral mass (VT:0010011)	trabecular volumetric bone mineral density (CMO:0001729)	7	9866467	60460686	Rat
1641885	Alcrsp9	Alcohol response QTL 9			alcohol metabolism trait (VT:0015089)	blood ethanol level (CMO:0000535)	7	24099606	69099606	Rat
631503	Bp102	Blood pressure QTL 102	1.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	1	44822433	Rat
1549840	Bss5	Bone structure and strength QTL 5	9.8		femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	7	24751841	69751841	Rat
10755438	Coatc9	Coat color QTL 9		0	coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	7	3529280	48529280	Rat
1300127	Srn1	Serum renin concentration QTL 1	3.87		blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	7	29409683	84928080	Rat
2298547	Neuinf5	Neuroinflammation QTL 5	3.7		nervous system integrity trait (VT:0010566)	spinal cord Cd74 protein level (CMO:0002131)	7	9462246	58265113	Rat
631513	Scl7	Serum cholesterol level QTL 7	4.1		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	7	37960569	82960569	Rat
10059592	Kidm45	Kidney mass QTL 45	3.95	0.025	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	7	7573985	52573985	Rat
10755440	Coatc10	Coat color QTL 10		0	coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	7	7496499	52496499	Rat
1354637	Scl30	Serum cholesterol level QTL 30	3.7		blood cholesterol amount (VT:0000180)	blood total cholesterol level (CMO:0000051)	7	19654317	49753746	Rat
10755453	Coatc12	Coat color QTL 12		0	coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	7	31112832	76112832	Rat
1354639	Spl5	Serum phospholipid level QTL 5	3.9		blood LDL phospholipid amount (VT:0010505)	blood low density lipoprotein phospholipid level (CMO:0001568)	7	19654317	52888450	Rat
10755451	Coatc11	Coat color QTL 11		0	coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	7	17944357	62944357	Rat
2317059	Aia15	Adjuvant induced arthritis QTL 15	2.46		joint integrity trait (VT:0010548)	right rear ankle joint diameter (CMO:0002150)	7	17004598	62004598	Rat
61410	Bw19	Body weight QTL 19	6.2	0.001	body mass (VT:0001259)	body weight (CMO:0000012)	7	1	44782185	Rat
7411605	Foco14	Food consumption QTL 14	24.1	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	7	34293282	79293282	Rat
1643004	Pain2	Pain QTL 2	1		mechanical nociception trait (VT:0002734)	self mutilation severity score (CMO:0002145)	7	9462246	98011544	Rat
631534	Lnnr1	Liver neoplastic nodule remodeling QTL 1	3.85	0.001	liver integrity trait (VT:0010547)	liver remodeling tumorous lesion number to liver total tumorous lesion number ratio (CMO:0001705)	7	34293282	79293282	Rat
634336	Anxrr17	Anxiety related response QTL 17	3.66		locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	7	924703	115097879	Rat
70190	Mcs6	Mammary carcinoma susceptibility QTL 6	2.29		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	7	26737401	63902784	Rat
1300132	Bp182	Blood pressure QTL 182	3.49		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	7	19654317	84928080	Rat
1300138	Hrtrt9	Heart rate QTL 9	4.72		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	7	29409683	53612950	Rat
10402855	Bp379	Blood pressure QTL 379		0.21	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	29409683	74409683	Rat
738033	Anxrr6	Anxiety related response QTL 6	4.1		exploratory behavior trait (VT:0010471)	percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)	7	15573889	60573889	Rat

RH136950

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	38,566,489 - 38,566,707 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	45,341,478 - 45,341,695	NCBI	Rnor6.0
Rnor_5.0	7	45,362,226 - 45,362,443	UniSTS	Rnor5.0
RGSC_v3.4	7	41,511,284 - 41,511,501	UniSTS	RGSC3.4
Celera	7	35,514,687 - 35,514,904	UniSTS
RH 3.4 Map	7	348.32	UniSTS
Cytogenetic Map	7	q21	UniSTS

RH137599

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	38,606,919 - 38,607,098 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	45,381,606 - 45,381,784	NCBI	Rnor6.0
Rnor_5.0	7	45,402,354 - 45,402,532	UniSTS	Rnor5.0
RGSC_v3.4	7	41,551,714 - 41,551,892	UniSTS	RGSC3.4
Celera	7	35,556,019 - 35,556,197	UniSTS
Cytogenetic Map	7	q21	UniSTS

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	45	113	68	67	36	25	36	6	183	93	93	37	60	31


RefSeq Transcripts	NM_172321	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039078522	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473960	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	L22022	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000029208 ⟹ ENSRNOP00000032996

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	7	38,553,196 - 38,607,239 (+)	Ensembl
Rnor_6.0 Ensembl	7	45,328,105 - 45,381,920 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000090641 ⟹ ENSRNOP00000073005

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	7	45,328,162 - 45,382,229 (+)	Ensembl

RefSeq Acc Id:

NM_172321 ⟹ NP_758824

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	40,439,750 - 40,493,788 (+)	NCBI
mRatBN7.2	7	38,553,196 - 38,607,239 (+)	NCBI
Rnor_6.0	7	45,328,207 - 45,381,920 (+)	NCBI
Rnor_5.0	7	45,348,955 - 45,402,668 (+)	NCBI
RGSC_v3.4	7	41,498,013 - 41,552,028 (+)	RGD
Celera	7	35,501,267 - 35,556,333 (+)	RGD

Sequence:

show sequence

GAATTCCACTTTTGGGGTGGGGGTAAAATAGATATTTTACTTGTGCGATAAGCTCAACAAACGAATAATAGTCCCCGCCTTGGCCTCCACCCACTCCTGTCCTCTTCCCTCTGGAAAGCAGAGCCACC
TCTTGGGGAGACCCTGCAGAGTTTGACATCTCAGCCCTCAGTCTTTTAAGTATTTTAACCAAGTGCATCCTCTGATCATTGTGCGATCATTATATTGGCTTTTCTTCATGTTTTTGACTTGCCAGGTG
CCTGGCCTGAGAGCTGCAAGAATTACTTCGAAGTTATTTCCCACCCTACAAGTGCGGTATAAATAACCAGACTTAATTTTATTGCATTGTTAAATGTTAGGCCCAAGCTCCAGTTCAAGACAAAGAGG
GAGGCTAAGAGATGAGAATCACTTTATTCACTCCAGGCAAAAGCCATGACATAAACCACATATCAGGCAGCCATATGTGGGCACCCAGGCACAGGCTGGTGCACAGACTGAATAAAGGTGAGACCAGC
ATGCAGCCTCATAGAAGTAGACACAAAAACTTTACACACACTCACATAACACACACACACACACACACGCACACACACACACACACACACACACGCGCGCGCGCGCCCGCGCGCGCCCCAGGAAACAA
ACGCCAGCATCCCGTGCAATATCCTGGCACACACAGGCGCTCACGAGTTTCTCGGTGCCAGCTTGCAGGACAGCGACTCCCGAAACCAAGCCTGCCCTTGGCAAGCTTTCTCTGGTCTCCAGACAGCT
CCTCTGCGGCCTCCCGCACCATCACCTGGATCCGACCCTTTCGCCACCTAGGAACCTGGAAGCTCTAAAAGGTGCTGGCTCAAGAAGCACCAGAGGTTGTCTTTAAGAAGAGTAATTTCCAATGCCTA
AGAATAGCAAAGTAGTAAAGAGAGATTTGGATGATGATGTCATTGAATCTGTCAAAGACCTCCTGTCCAATGAAGACTCAGTGGAAGATGTTTCTAAGAAGAGCGAACTAATTGTTGATGTTCAAGAA
GAGAAAGATACAGATGCTGAAGATGGATCTGAAGTTGATGATGAAAGGCCAGCTTGGAACAGTAAGCTGCAATACATCCTGGCGCAAGTTGGATTTTCTGTAGGTCTGGGGAATGTGTGGCGGTTCCC
ATACCTCTGCCAAAAGAATGGCGGTGGTGCATATCTTTTGCCATATTTAATACTACTTCTGGTGATAGGAATTCCACTCTTCTTCTTGGAACTTTCTGTGGGTCAAAGAATTCGGAGAGGCAGCATCG
GGGTTTGGAATTACATAAGCCCTAAACTGGGTGGGATTGGATTCGCAAGCTGTGTAGTGTGCTATTTTGTGGCTCTCTACTACAATGTCATCATTGGCTGGACATTGTTTTACTTTTCTCAGTCTTTT
CAACAACCTCTCCCTTGGGATCAATGCCCCCTGGTGAAAAACGCATCTCATACTTATATTGAGCCAGAATGTGAAAAAAGTTCTGCCACCACTTATTACTGGTACCGGGAAGCACTGGCTATCAGCAG
CTCCATCTCTGAAAGTGGGGGCTTAAACTGGAAGATGACTGGCTGCCTGCTGGCTGCCTGGGTCATGGTTTGTCTGGCCATGATCAAAGGCATTCAGTCCTCTGGAAAAATCATGTATTTTAGTTCTC
TGTTCCCCTACGTGGTACTTATATGCTTCCTAATAAGATCTCTCCTTTTAAATGGTTCAATTGATGGCATCCGACACATGTTCACCCCTAAGCTTGAAATGATGCTGGAGCCCAAGGTTTGGAGAGAG
GCAGCGACTCAAGTCTTCTTTGCCTTGGGTTTGGGATTTGGTGGAGTCATCGCGTTTTCCAGTTACAACAAGAGAGACAACAACTGCCACTTCGACGCTGTCCTCGTGTCTTTTATCAACTTTTTCAC
TTCAGTCCTGGCAACACTGGTGGTGTTCGCAGTTCTGGGGTTCAAAGCCAATATCGTAAATGAAAAGTGCATTTCACAAAATTCTGAGATGATCTTGAAACTTTTGAAAACGGGAAACGTTAGTTGGG
ATGTCATTCCCCGTCACATCAACCTTTCAGCTGTCACTGCGGAAGATTATCATGTAGTTTACGACATCATTCAAAAAGTGAAGGAGGAGGAGTTTGCTGTTCTCCATCTCAAAGCCTGTCAAATTGAG
GATGAGCTAAATAAAGCTGTGCAGGGCACTGGCTTGGCTTTCATTGCCTTTACAGAGGCCATGACACATTTTCCTGCATCTCCCTTCTGGTCAGTGATGTTTTTCCTCATGCTGATAAATCTCGGGCT
CGGCAGCATGTTTGGAACCATTGAAGGAATCATCACTCCTGTTGTGGACACATTCAAAGTGAGGAAGGAAATACTCACCGTTATCTGTTGCCTCCTAGCATTTTGTATCGGCTTGATGTTTGTGCAGC
GCTCTGGAAATTACTTCGTTACAATGTTTGATGATTATTCTGCCACATTGCCTCTGTTAATCGTGGTCATCTTGGAGAATATTGCTGTAAGCTTCGTTTACGGCATAGATAAGTTTCTAGAAGACCTA
ACAGACATGTTAGGATTTGCTCCAAGCAAATATTACTATTACATGTGGAAATACATTTCTCCTCTAATGCTAGTAACATTGTTAATAGCTAGCATTGTGAATATGGGATTAAGTCCTCCGGGATATAA
TGCATGGATCAAGGAGAAGGCATCCGAAGAATTTCTGAGCTACCCGATGTGGGGGATGGTGGTCTGTTTCTCTCTGATGGTGCTGGCTATACTTCCTGTCCCAGTCGTTTTCGTCATTCGTCGCTGCA
ACCTCATAGATGATAGTTCTGGTAACTTGGCCTCTGTGACCTATAAGAGAGGAAGAGTCCTGAAAGAACCCGTGAACTTAGACGGAGATGATGCAAGCCTCATTCACGGAAAGATACCAAGTGAAATG
TCGTCTCCAAATTTTGGTAAAAATATCTATCGAAAACAGAGTGGTTCTCCGACCCTGGACACTGCTCCCAATGGACGCTATGGGATTGGGTATTTGATGGCAGATATGCCAGATATGCCCGAGTCTGA
CTTGTAGCTGAGTGAAAGCAAAGGGTTGAGCTTGGTTCATTTTTATCAATGAGCATTGGTTCTACTATGAGAAGCAGTGAGCTTCACTTGTCACAAGGTGATCTCAGGTGTCCATAGCCGCCATCTTT
AATCTCAACAGTTTAAGACAGTTCCAGAAGAGCAATCCTCAGTTTACAATTACAAAGTAACAATTGCAGACAAAGCTTACATTGACTGGGGTCCTTTGCCAGGATTTTTTTAAAAAGCACTTTGACAT
ACTTTCAAGTATTTCTATCTCTTAAAAAAAAGGTGTTACCTCAGTTTCTAATAGTTTCCGGATTTAATATTATTGGCGATTTGAAAAAAAAATCCCTGTTATATCTTACAATTCATAATTTTGCCTTC
GGAGTAAGTTCCAGTATTACCATGAACAGTTGTGTGTGAGCGGGTGCTTCTCAGCACATTGCCATGAGTACGTTCTGTAGATAGCCTGTACTTATCTTTGGTAGCATTGAAACCTTAGGCACTTAGTT
GGAGAAAACTTCAAAGTATTTTCTTATATGATAGCCGTCTAGAGCAATAGTATTAAAGAGTAAAAAGGCACTGATGGTGGATGAGAGGTTAAGTCCAGATGTGATCGAGGGTTTCCTGGAGTGGCCAT
ATATTTTGTGTAAAATAGGTGTGTGCAAATGATTGAAGGGACTCTCGAGAATTATGCAGACTGCATTTTTCTTATGCCGTGTGCCTAATAAACCTACTTAATATTTATTGTGGTTTTGAGATCACTTA
TAGTATATTTATATAATATACTTGCAATGTATAGAGATGCGCATCAGGACTCTTAAGTGCTGGTTTGAAAACTTGAAGCAAGATAGCATCTGATTTCATATGTTTCTGTTTTGCTTCATTTTATGCAA
ATACGAATTCTTTTTTTTAAGTGATTGTTAAAACTGTATGGCATTACATTTTAACCTACAAATAAACGAAGTTTAACA

hide sequence

RefSeq Acc Id:

XM_039078522 ⟹ XP_038934450

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	40,439,607 - 40,493,787 (+)	NCBI
mRatBN7.2	7	38,553,055 - 38,606,264 (+)	NCBI


Protein RefSeqs	NP_758824	(Get FASTA)	NCBI Sequence Viewer
	XP_038934450	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAA41729	(Get FASTA)	NCBI Sequence Viewer
	EDM16784	(Get FASTA)	NCBI Sequence Viewer
	EDM16785	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000032996
	ENSRNOP00000032996.4
GenBank Protein	Q08469	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_758824 ⟸ NM_172321

- UniProtKB:

Q63838 (UniProtKB/Swiss-Prot), Q08469 (UniProtKB/Swiss-Prot), A6IGB4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MPKNSKVVKRDLDDDVIESVKDLLSNEDSVEDVSKKSELIVDVQEEKDTDAEDGSEVDDERPAWNSKLQYILAQVGFSVGLGNVWRFPYLCQKNGGGAYLLPYLILLLVIGIPLFFLELSVGQRIRRG
SIGVWNYISPKLGGIGFASCVVCYFVALYYNVIIGWTLFYFSQSFQQPLPWDQCPLVKNASHTYIEPECEKSSATTYYWYREALAISSSISESGGLNWKMTGCLLAAWVMVCLAMIKGIQSSGKIMYF
SSLFPYVVLICFLIRSLLLNGSIDGIRHMFTPKLEMMLEPKVWREAATQVFFALGLGFGGVIAFSSYNKRDNNCHFDAVLVSFINFFTSVLATLVVFAVLGFKANIVNEKCISQNSEMILKLLKTGNV
SWDVIPRHINLSAVTAEDYHVVYDIIQKVKEEEFAVLHLKACQIEDELNKAVQGTGLAFIAFTEAMTHFPASPFWSVMFFLMLINLGLGSMFGTIEGIITPVVDTFKVRKEILTVICCLLAFCIGLMF
VQRSGNYFVTMFDDYSATLPLLIVVILENIAVSFVYGIDKFLEDLTDMLGFAPSKYYYYMWKYISPLMLVTLLIASIVNMGLSPPGYNAWIKEKASEEFLSYPMWGMVVCFSLMVLAILPVPVVFVIR
RCNLIDDSSGNLASVTYKRGRVLKEPVNLDGDDASLIHGKIPSEMSSPNFGKNIYRKQSGSPTLDTAPNGRYGIGYLMADMPDMPESDL

hide sequence

Ensembl Acc Id:

ENSRNOP00000073005 ⟸ ENSRNOT00000090641

Ensembl Acc Id:

ENSRNOP00000032996 ⟸ ENSRNOT00000029208

RefSeq Acc Id:	XP_038934450 ⟸ XM_039078522
- Peptide Label:	isoform X1
- UniProtKB:	Q08469 (UniProtKB/Swiss-Prot), Q63838 (UniProtKB/Swiss-Prot), A6IGB4 (UniProtKB/TrEMBL)

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q08469-F1-model_v2	AlphaFold	Q08469	1-729	view protein structure

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Database	Acc Id	Source(s)
BioCyc Gene	G2FUF-34210	BioCyc
Ensembl Genes	ENSRNOG00000027468	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000029208	ENTREZGENE
	ENSRNOT00000029208.6	UniProtKB/Swiss-Prot
InterPro	B(0)AT2	UniProtKB/Swiss-Prot
	Na/ntran_symport	UniProtKB/Swiss-Prot
	Neutral_aa_SLC6	UniProtKB/Swiss-Prot
	SNS_sf	UniProtKB/Swiss-Prot
KEGG Report	rno:282712	UniProtKB/Swiss-Prot
NCBI Gene	282712	ENTREZGENE
PANTHER	PTHR11616	UniProtKB/Swiss-Prot
	SODIUM-DEPENDENT NEUTRAL AMINO ACID TRANSPORTER B(0)AT2	UniProtKB/Swiss-Prot
Pfam	SNF	UniProtKB/Swiss-Prot
PhenoGen	Slc6a15	PhenoGen
PRINTS	NANEUSMPORT	UniProtKB/Swiss-Prot
	ORPHTRNSPORT	UniProtKB/Swiss-Prot
PROSITE	NA_NEUROTRAN_SYMP_1	UniProtKB/Swiss-Prot
	NA_NEUROTRAN_SYMP_2	UniProtKB/Swiss-Prot
	NA_NEUROTRAN_SYMP_3	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000027468	RatGTEx
Superfamily-SCOP	SSF161070	UniProtKB/Swiss-Prot
UniProt	A6IGB4	ENTREZGENE, UniProtKB/TrEMBL
	Q08469	ENTREZGENE
	Q63838	ENTREZGENE
	S6A15_RAT	UniProtKB/Swiss-Prot
UniProt Secondary	Q63838	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-02-24	Slc6a15	solute carrier family 6 member 15	Slc6a15	solute carrier family 6 (neutral amino acid transporter), member 15	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-10-23	Slc6a15	solute carrier family 6 (neutral amino acid transporter), member 15	Slc6a15	solute carrier family 6 (neurotransmitter transporter), member 15	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2004-09-10	Slc6a15	solute carrier family 6 (neurotransmitter transporter), member 15	Ntt73	orphan transporter v7-3	Symbol and Name updated	1299863	APPROVED
2003-02-27	Ntt73	orphan transporter v7-3			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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