Wnt8b (Wnt family member 8B) - Rat Genome Database

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Gene: Wnt8b (Wnt family member 8B) Rattus norvegicus
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Symbol: Wnt8b
Name: Wnt family member 8B
RGD ID: 1307644
Description: Predicted to enable cytokine activity and frizzled binding activity. Predicted to be involved in canonical Wnt signaling pathway; cell fate commitment; and neuron differentiation. Predicted to act upstream of or within negative regulation of gene expression and positive regulation of gene expression. Predicted to be active in extracellular space. Human ortholog(s) of this gene implicated in Hirschsprung's disease. Orthologous to human WNT8B (Wnt family member 8B); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; basal cell carcinoma pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC293990; protein Wnt-8b; wingless related MMTV integration site 8b; wingless-type MMTV integration site family, member 8B
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81253,303,369 - 253,325,224 (+)NCBIGRCr8
mRatBN7.21243,354,145 - 243,376,000 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1243,354,086 - 243,374,286 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1251,515,855 - 251,519,653 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01258,216,947 - 258,220,745 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01250,866,030 - 250,869,828 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01264,244,150 - 264,266,136 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1264,260,505 - 264,264,302 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01271,686,942 - 271,707,512 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41249,559,236 - 249,563,033 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11249,743,064 - 249,822,688 (+)NCBI
Celera1239,184,707 - 239,188,504 (+)NCBICelera
Cytogenetic Map1q54NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Wnt8bRatHirschsprung's disease  ISOWNT8B (Homo sapiens)12801434 RGD 

1 to 20 of 29 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Wnt8bRat1,2-dichloroethane increases expressionISOWnt8b (Mus musculus)6480464ethylene dichloride results in increased expression of WNT8B mRNACTDPMID:28960355
Wnt8bRat2,2',4,4',5,5'-hexachlorobiphenyl multiple interactionsISOWnt8b (Mus musculus)6480464[2 more ...CTDPMID:25510870
Wnt8bRat2,2',4,4'-Tetrabromodiphenyl ether increases expressionISOWNT8B (Homo sapiens)64804642 more ...CTDPMID:31326446
Wnt8bRat2,2',5,5'-tetrachlorobiphenyl multiple interactionsISOWnt8b (Mus musculus)6480464[2 more ...CTDPMID:25510870
Wnt8bRat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of WNT8B mRNACTDPMID:33387578
Wnt8bRat4,4'-sulfonyldiphenol decreases expressionISOWnt8b (Mus musculus)6480464bisphenol S results in decreased expression of WNT8B mRNACTDPMID:30951980
Wnt8bRat5-aza-2'-deoxycytidine increases expressionISOWnt8b (Mus musculus)6480464Decitabine results in increased expression of WNT8B mRNACTDPMID:27915011
Wnt8bRat6-propyl-2-thiouracil decreases expressionEXP 6480464Propylthiouracil results in decreased expression of WNT8B mRNACTDPMID:33150595
Wnt8bRat6-propyl-2-thiouracil increases methylationEXP 6480464Propylthiouracil results in increased methylation of WNT8B promoterCTDPMID:33150595
Wnt8bRatacrylamide decreases expressionISOWNT8B (Homo sapiens)6480464Acrylamide results in decreased expression of WNT8B mRNACTDPMID:32763439
Wnt8bRataristolochic acid A increases expressionISOWNT8B (Homo sapiens)6480464aristolochic acid I results in increased expression of WNT8B mRNACTDPMID:33212167
Wnt8bRatbenzo[a]pyrene increases methylationISOWNT8B (Homo sapiens)6480464Benzo(a)pyrene results in increased methylation of WNT8B exon and Benzo(a)pyrene results in increased methylation of WNT8B promoterCTDPMID:27901495
Wnt8bRatbis(2-ethylhexyl) phthalate decreases expressionISOWNT8B (Homo sapiens)6480464Diethylhexyl Phthalate results in decreased expression of WNT8B mRNACTDPMID:31163220
Wnt8bRatbisphenol A decreases expressionEXP 6480464bisphenol A results in decreased expression of WNT8B mRNACTDPMID:25181051
Wnt8bRatbisphenol A increases expressionEXP 6480464bisphenol A results in increased expression of WNT8B mRNACTDPMID:30816183
Wnt8bRatbisphenol A decreases expressionISOWnt8b (Mus musculus)6480464bisphenol A results in decreased expression of WNT8B mRNACTDPMID:30951980
Wnt8bRatbisphenol A increases methylationEXP 6480464bisphenol A results in increased methylation of WNT8B geneCTDPMID:28505145
Wnt8bRatbisphenol F decreases expressionISOWnt8b (Mus musculus)6480464bisphenol F results in decreased expression of WNT8B mRNACTDPMID:30951980
Wnt8bRatCGP 52608 multiple interactionsISOWNT8B (Homo sapiens)6480464CGP 52608 promotes the reaction [RORA protein binds to WNT8B gene]CTDPMID:28238834
Wnt8bRatdecabromodiphenyl ether decreases expressionISOWNT8B (Homo sapiens)6480464decabromobiphenyl ether results in decreased expression of WNT8B mRNACTDPMID:31326446

1 to 20 of 29 rows

Biological Process
1 to 11 of 11 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Wnt8bRatbiological_process  ND 159840707/2010: no relevant rat dataRGD 
Wnt8bRatcanonical Wnt signaling pathway involved_inISOWNT8B (Homo sapiens)1624291 PMID:28733458RGDPMID:28733458
Wnt8bRatcanonical Wnt signaling pathway involved_inIEAUniProtKB:Q93098 and ensembl:ENSP000003406771600115GO_REF:0000107EnsemblGO_REF:0000107
Wnt8bRatcanonical Wnt signaling pathway involved_inIBAFB:FBgn0004360 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Wnt8bRatcell fate commitment involved_inIBAFB:FBgn0284084 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Wnt8bRatgene expression acts_upstream_ofISOWnt8b (Mus musculus)1624291MGI:4414945 PMID:19890917RGDPMID:19890917
Wnt8bRatnegative regulation of gene expression acts_upstream_of_or_withinISOWnt8b (Mus musculus)1624291MGI:4414945 PMID:19890917RGDPMID:19890917
Wnt8bRatneuron differentiation involved_inIBAFB:FBgn0004360 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Wnt8bRatpositive regulation of gene expression acts_upstream_of_or_withinISOWnt8b (Mus musculus)1624291MGI:4414945 PMID:19890917RGDPMID:19890917
Wnt8bRatWnt signaling pathway involved_inIEAUniProtKB-KW:KW-08791600115GO_REF:0000043UniProtGO_REF:0000043
Wnt8bRatWnt signaling pathway involved_inIEAInterPro:IPR005817 and InterPro:IPR0133011600115GO_REF:0000002InterProGO_REF:0000002
1 to 11 of 11 rows

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Wnt8bRatextracellular region located_inIEAUniProtKB-KW:KW-09641600115GO_REF:0000043UniProtGO_REF:0000043
Wnt8bRatextracellular region located_inIEAInterPro:IPR005817 and InterPro:IPR0133011600115GO_REF:0000002InterProGO_REF:0000002
Wnt8bRatextracellular space is_active_inIBAFB:FBgn0284084 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Wnt8bRatcytokine activity enablesIBAMGI:98953 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Wnt8bRatfrizzled binding enablesIBAFB:FBgn0004360 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Wnt8bRatreceptor ligand activity enablesISOWNT8B (Homo sapiens)1624291 PMID:28733458RGDPMID:28733458
Wnt8bRatreceptor ligand activity enablesIEAUniProtKB:Q93098 and ensembl:ENSP000003406771600115GO_REF:0000107EnsemblGO_REF:0000107
Wnt8bRatsignaling receptor binding enablesIEAInterPro:IPR005817 and InterPro:IPR0133011600115GO_REF:0000002InterProGO_REF:0000002

RGD Manual Annotations


  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Wnt8bRatWnt signaling pathway  ISOWnt8b (Mus musculus)2301993 RGD 
Wnt8bRatWnt signaling, canonical pathway   ISOWNT8B (Homo sapiens)2313743 RGD 

Imported Annotations - KEGG (archival)

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Wnt8bRatbasal cell carcinoma pathway  IEA 6907045 KEGGrno:05217
Wnt8bRatHedgehog signaling pathway   IEA 6907045 KEGGrno:04340
Wnt8bRatWnt signaling pathway  IEA 6907045 KEGGrno:04310

1 to 9 of 9 rows
#
Reference Title
Reference Citation
1. [Mutation and expression of WNT8b gene and SHH gene in Hirschsprung disease]. Gao H, etal., Zhonghua Wei Chang Wai Ke Za Zhi. 2010 Oct;13(10):758-61.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
4. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
5. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. Comprehensive gene review and curation RGD comprehensive gene curation
8. The Wnt Homepage Roel Nusse - Howard Hughes Medical Institute and the Department of Developmental Biology at Stanford University, California, USA
9. Alternative wnt signaling is initiated by distinct receptors. van Amerongen R, etal., Sci Signal. 2008 Sep 2;1(35):re9.
1 to 9 of 9 rows
PMID:19890917   PMID:28733458  



Wnt8b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81253,303,369 - 253,325,224 (+)NCBIGRCr8
mRatBN7.21243,354,145 - 243,376,000 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1243,354,086 - 243,374,286 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1251,515,855 - 251,519,653 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01258,216,947 - 258,220,745 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01250,866,030 - 250,869,828 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01264,244,150 - 264,266,136 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1264,260,505 - 264,264,302 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01271,686,942 - 271,707,512 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41249,559,236 - 249,563,033 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11249,743,064 - 249,822,688 (+)NCBI
Celera1239,184,707 - 239,188,504 (+)NCBICelera
Cytogenetic Map1q54NCBI
WNT8B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3810100,463,009 - 100,483,744 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl10100,463,009 - 100,483,744 (+)EnsemblGRCh38hg38GRCh38
GRCh3710102,222,766 - 102,243,501 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3610102,212,802 - 102,233,389 (+)NCBINCBI36Build 36hg18NCBI36
Build 3410102,212,787 - 102,233,491NCBI
Celera1095,960,656 - 95,981,247 (+)NCBICelera
Cytogenetic Map10q24.31NCBI
HuRef1095,851,649 - 95,872,259 (+)NCBIHuRef
CHM1_110102,507,449 - 102,528,036 (+)NCBICHM1_1
T2T-CHM13v2.010101,346,091 - 101,366,850 (+)NCBIT2T-CHM13v2.0
Wnt8b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391944,481,912 - 44,502,712 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1944,481,911 - 44,502,712 (+)EnsemblGRCm39 Ensembl
GRCm381944,493,472 - 44,514,273 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1944,493,472 - 44,514,273 (+)EnsemblGRCm38mm10GRCm38
MGSCv371944,567,962 - 44,588,763 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361944,546,784 - 44,565,828 (+)NCBIMGSCv36mm8
Celera1945,276,759 - 45,282,000 (+)NCBICelera
Cytogenetic Map19C3NCBI
cM Map1937.98NCBI
Wnt8b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554859,658,432 - 9,679,385 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554859,658,432 - 9,679,371 (-)NCBIChiLan1.0ChiLan1.0
WNT8B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v28112,347,018 - 112,367,626 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan110112,352,338 - 112,372,946 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01097,079,996 - 97,083,933 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.110100,550,158 - 100,565,369 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl10100,544,531 - 100,565,369 (+)Ensemblpanpan1.1panPan2
WNT8B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12813,187,927 - 13,210,398 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2813,188,142 - 13,210,398 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2813,358,682 - 13,383,539 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02813,656,897 - 13,681,768 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2813,657,358 - 13,679,572 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12813,203,326 - 13,228,261 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02813,241,826 - 13,266,719 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02813,375,944 - 13,400,875 (+)NCBIUU_Cfam_GSD_1.0
Wnt8b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721333,560,758 - 33,584,103 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366005,163,972 - 5,187,224 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366005,163,940 - 5,187,098 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
WNT8B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl14111,562,489 - 111,589,893 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.114111,562,278 - 111,589,897 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2463,953,354 - 63,981,516 (-)NCBISscrofa10.2Sscrofa10.2susScr3
WNT8B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1993,478,569 - 93,504,279 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl993,479,392 - 93,501,835 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604854,535,855 - 54,544,499 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Wnt8b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624831129,252 - 148,553 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624831139,884 - 149,135 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Wnt8b
102 total Variants

Predicted Target Of
Summary Value
Count of predictions:283
Count of miRNA genes:180
Interacting mature miRNAs:203
Transcripts:ENSRNOT00000018815
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 62 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1578778Pur4Proteinuria QTL 43.30.003urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)1150700247252085048Rat
1354646Kidm18Kidney mass QTL 185.7kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1151162512256448636Rat
631690Scl5Serum cholesterol level QTL 52.1blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)1236125214260522016Rat
1354652Kidm20Kidney mass QTL 204.3kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1177227632256448636Rat
2293674Bss39Bone structure and strength QTL 397.10.0001femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)1201554356246554356Rat
2302378Insul11Insulin level QTL 113.25blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1144267353251128347Rat
61327Eae7Experimental allergic encephalomyelitis QTL 75.6body mass (VT:0001259)change in body weight (CMO:0002045)1216255568260522016Rat
1600392Bw123Body weight QTL 1230.001body mass (VT:0001259)body weight (CMO:0000012)1223201027260522016Rat
1578763Kidm29Kidney mass QTL 293.30.0001kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1179567751260522016Rat
1600395Niddm69Non-insulin dependent diabetes mellitus QTL 694.140.0002blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)1195804352257091168Rat

1 to 10 of 62 rows
UniSTS:471332  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21243,371,293 - 243,372,283 (+)MAPPERmRatBN7.2
Rnor_6.01264,261,310 - 264,262,299NCBIRnor6.0
Rnor_5.01271,704,475 - 271,705,464UniSTSRnor5.0
RGSC_v3.41249,560,041 - 249,561,030UniSTSRGSC3.4
Celera1239,185,512 - 239,186,501UniSTS
Cytogenetic Map1q54UniSTS
Wnt8b  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21243,373,286 - 243,373,841 (+)MAPPERmRatBN7.2
Rnor_6.01264,263,303 - 264,263,857NCBIRnor6.0
Rnor_5.01271,706,468 - 271,707,022UniSTSRnor5.0
RGSC_v3.41249,562,034 - 249,562,588UniSTSRGSC3.4
Celera1239,187,505 - 239,188,059UniSTS
Cytogenetic Map1q54UniSTS
UniSTS:277890  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21243,373,357 - 243,373,488 (+)MAPPERmRatBN7.2
Rnor_6.01264,263,374 - 264,263,504NCBIRnor6.0
Rnor_5.01271,706,539 - 271,706,669UniSTSRnor5.0
RGSC_v3.41249,562,105 - 249,562,235UniSTSRGSC3.4
Celera1239,187,576 - 239,187,706UniSTS
Cytogenetic Map1q54UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
5 7 15 101 39 29 14 9 14 2 98 43 85 31 48 15



Ensembl Acc Id: ENSRNOT00000018815   ⟹   ENSRNOP00000018815
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1243,354,086 - 243,374,286 (+)Ensembl
Rnor_6.0 Ensembl1264,260,505 - 264,264,302 (+)Ensembl
RefSeq Acc Id: NM_001106359   ⟹   NP_001099829
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81253,303,369 - 253,325,224 (+)NCBI
mRatBN7.21243,354,145 - 243,376,000 (+)NCBI
Rnor_6.01264,260,505 - 264,264,302 (+)NCBI
Rnor_5.01271,686,942 - 271,707,512 (+)NCBI
RGSC_v3.41249,559,236 - 249,563,033 (+)RGD
Celera1239,184,707 - 239,188,504 (+)RGD
Sequence:
Protein RefSeqs NP_001099829 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDL94285 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000018815
  ENSRNOP00000018815.7
RefSeq Acc Id: NP_001099829   ⟸   NM_001106359
- Peptide Label: precursor
- UniProtKB: D3ZND6 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000018815   ⟸   ENSRNOT00000018815

Name Modeler Protein Id AA Range Protein Structure
AF-D3ZND6-F1-model_v2 AlphaFold D3ZND6 1-322 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



1 to 22 of 22 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-55587 BioCyc
Ensembl Genes ENSRNOG00000013817 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000018815 ENTREZGENE
  ENSRNOT00000018815.7 UniProtKB/TrEMBL
Gene3D-CATH 3.30.2460.20 UniProtKB/TrEMBL
InterPro Wnt8 UniProtKB/TrEMBL
  Wnt_C UniProtKB/TrEMBL
  Wnt_grthfactor_CS UniProtKB/TrEMBL
  Wnt_SF UniProtKB/TrEMBL
KEGG Report rno:293990 UniProtKB/TrEMBL
NCBI Gene 293990 ENTREZGENE
PANTHER PTHR12027:SF94 UniProtKB/TrEMBL
  Wnt UniProtKB/TrEMBL
Pfam wnt UniProtKB/TrEMBL
PhenoGen Wnt8b PhenoGen
PRINTS WNT8PROTEIN UniProtKB/TrEMBL
  WNTPROTEIN UniProtKB/TrEMBL
PROSITE WNT1 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000013817 RatGTEx
SMART WNT1 UniProtKB/TrEMBL
UniProt A6JHG1_RAT UniProtKB/TrEMBL
  D3ZND6 ENTREZGENE, UniProtKB/TrEMBL
1 to 22 of 22 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-03-29 Wnt8b  Wnt family member 8B  Wnt8b  wingless-type MMTV integration site family, member 8B  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-11-14 Wnt8b  wingless-type MMTV integration site family, member 8B  Wnt8b  wingless related MMTV integration site 8b   Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Wnt8b  wingless related MMTV integration site 8b   Wnt8b_predicted  wingless related MMTV integration site 8b (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Wnt8b_predicted  wingless related MMTV integration site 8b (predicted)      Symbol and Name status set to approved 70820 APPROVED