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ONTOLOGY REPORT - ANNOTATIONS


Term:stereocilium tip
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Accession:GO:0032426 term browser browse the term
Definition:A distinct compartment at the tip of a stereocilium, distal to the site of attachment to the apical cell surface. It consists of a dense matrix bridging the barbed ends of the stereocilium actin filaments with the overlying plasma membrane, is dynamic compared to the shaft, and is required for stereocilium elongation.


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stereocilium tip term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc14a cell division cycle 14A ISO (MGI:6118860|PMID:29293958) RGD PMID:29293958 MGI:6118860 NCBI chr 2:219,302,577...219,458,345
Ensembl chr 2:219,302,577...219,458,271
JBrowse link
G Cdh23 cadherin-related 23 ISO (MGI:2447265|PMID:12485990), (MGI:3686545|PMID:17050716), (MGI:5578076|PMID:24920589) RGD PMID:12485990, PMID:17050716, PMID:24920589 MGI:2447265, MGI:3686545, MGI:5578076 NCBI chr20:29,857,018...30,263,758
Ensembl chr20:29,857,637...29,990,111
JBrowse link
G Ceacam16 CEA cell adhesion molecule 16, tectorial membrane component IEA
ISO
IBA
ISS
GO_REF:0000107
(MGI:4947458|PMID:21368133)
PMID:21873635
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:21368133, PMID:21873635 GO_REF:0000024, GO_REF:0000107, MGI:4947458, RGD:13792537 NCBI chr 1:80,773,819...80,783,898
Ensembl chr 1:80,773,819...80,783,898
JBrowse link
G Coro1a coronin 1A ISO (MGI:5766107|PMID:26754646) RGD PMID:26754646 MGI:5766107 NCBI chr 1:198,123,883...198,128,890
Ensembl chr 1:198,123,884...198,128,857
JBrowse link
G Eps8 epidermal growth factor receptor pathway substrate 8 ISO (MGI:5509070|PMID:23918390) RGD PMID:23918390 MGI:5509070 NCBI chr 4:171,475,155...171,645,620
Ensembl chr 4:171,475,567...171,591,882
JBrowse link
G Eps8l2 EPS8-like 2 ISO (MGI:5509070|PMID:23918390) RGD PMID:23918390 MGI:5509070 NCBI chr 1:214,327,992...214,353,466
Ensembl chr 1:214,328,071...214,353,461
JBrowse link
G Espn espin IEA
ISO
ISS
GO_REF:0000107
(MGI:5315207|PMID:22264607), (MGI:5766107|PMID:26754646)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:22264607, PMID:26754646 GO_REF:0000024, GO_REF:0000107, MGI:5315207, MGI:5766107 NCBI chr 5:169,293,356...169,331,338
Ensembl chr 5:169,293,904...169,331,163
JBrowse link
G Espnl espin-like ISO (MGI:5766107|PMID:26754646), (MGI:5805759|PMID:26926603) RGD PMID:26754646, PMID:26926603 MGI:5766107, MGI:5805759 NCBI chr 9:98,459,175...98,484,930
Ensembl chr 9:98,460,177...98,483,419
JBrowse link
G Homer2 homer scaffold protein 2 ISS
ISO
GO_REF:0000024
(MGI:5688813|PMID:25816005)
UniProt
RGD
PMID:25816005 GO_REF:0000024, MGI:5688813 NCBI chr 1:143,443,300...143,535,579
Ensembl chr 1:143,443,300...143,535,583
JBrowse link
G Lhfpl5 LHFPL tetraspan subfamily member 5 ISO (MGI:5468200|PMID:23217710) RGD PMID:23217710 MGI:5468200 NCBI chr20:5,815,837...5,826,137
Ensembl chr20:5,815,837...5,826,137
JBrowse link
G Morn4 MORN repeat containing 4 ISS
ISO
GO_REF:0000024
(MGI:5766107|PMID:26754646)
UniProt
RGD
PMID:26754646 GO_REF:0000024, MGI:5766107 NCBI chr 1:261,323,079...261,333,383
Ensembl chr 1:261,323,083...261,333,383
JBrowse link
G Myo3a myosin IIIA ISO (MGI:4849846|PMID:21165622), (MGI:5315207|PMID:22264607), (MGI:5766107|PMID:26754646) RGD PMID:21165622, PMID:22264607, PMID:26754646 MGI:4849846, MGI:5315207, MGI:5766107 NCBI chr17:88,952,635...89,167,538
Ensembl chr17:88,963,981...89,167,018
JBrowse link
G Myo3b myosin IIIB ISO (MGI:5315207|PMID:22264607), (MGI:5766107|PMID:26754646) RGD PMID:22264607, PMID:26754646 MGI:5315207, MGI:5766107 NCBI chr 3:56,355,433...56,717,740
Ensembl chr 3:56,355,431...56,584,547
JBrowse link
G Pdzd7 PDZ domain containing 7 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:264,776,393...264,796,206
Ensembl chr 1:264,776,398...264,794,938
JBrowse link
G Pkhd1l1 PKHD1 like 1 ISO (MGI:6358987|PMID:31444330) RGD PMID:31444330 MGI:6358987 NCBI chr 7:83,373,022...83,548,944
Ensembl chr 7:83,373,022...83,545,540
JBrowse link
G Slc9a3r1 SLC9A3 regulator 1 ISO (MGI:5578076|PMID:24920589) RGD PMID:24920589 MGI:5578076 NCBI chr10:103,713,045...103,730,145
Ensembl chr10:103,713,045...103,730,145
JBrowse link
G Strc stereocilin IBA
ISO
PMID:21873635
(MGI:3818235|PMID:18849963), (MGI:5430850|PMID:21165971), (MGI:5578076|PMID:24920589)
RGD PMID:18849963, PMID:21165971, PMID:24920589, PMID:21873635 MGI:3818235, MGI:5430850, MGI:5578076, RGD:13792537 NCBI chr 3:113,324,403...113,343,513
Ensembl chr 3:113,324,698...113,342,675
JBrowse link
G Tmc1 transmembrane channel-like 1 ISO (MGI:5320864|PMID:22105175) RGD PMID:22105175 MGI:5320864 NCBI chr 1:238,336,919...238,525,792
Ensembl chr 1:238,336,919...238,441,500
JBrowse link
G Tmc2 transmembrane channel-like 2 ISO (MGI:5320864|PMID:22105175) RGD PMID:22105175 MGI:5320864 NCBI chr 3:122,720,769...122,790,100
Ensembl chr 3:122,720,769...122,790,100
JBrowse link
G Ush1c USH1 protein network component harmonin IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:102,207,096...102,256,779
Ensembl chr 1:102,207,096...102,255,459
JBrowse link
G Whrn whirlin IEA
ISO
IDA
IBA
GO_REF:0000107
(MGI:5565635|PMID:24334608)
PMID:23055499
PMID:21873635
Ensembl
RGD
PMID:24334608, PMID:23055499, PMID:21873635 GO_REF:0000107, MGI:5565635, RGD:13800540, RGD:13792537 NCBI chr 5:79,235,541...79,317,206
Ensembl chr 5:79,234,950...79,317,206
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20602
    cellular anatomical entity 20292
      stereocilium tip 21
Path 2
Term Annotations click to browse term
  cellular_component 20602
    cellular anatomical entity 20292
      cell projection 2550
        plasma membrane bounded cell projection 2479
          neuron projection 1660
            stereocilium 62
              stereocilium tip 21
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.