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ONTOLOGY REPORT - ANNOTATIONS


Term:stereocilium tip
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Accession:GO:0032426 term browser browse the term
Definition:A distinct compartment at the tip of a stereocilium, distal to the site of attachment to the apical cell surface. It consists of a dense matrix bridging the barbed ends of the stereocilium actin filaments with the overlying plasma membrane, is dynamic compared to the shaft, and is required for stereocilium elongation.



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stereocilium tip term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc14a cell division cycle 14A located_in ISO (MGI:6118860|PMID:29293958) RGD PMID:29293958 MGI:6118860 NCBI chr 2:204,225,540...204,380,927
Ensembl chr 2:204,225,540...204,380,927
JBrowse link
G Cdh23 cadherin-related 23 located_in IEA
ISO
GO_REF:0000107
(PMID:12485990), (PMID:17050716), (PMID:24920589)
Ensembl
RGD
PMID:12485990 PMID:17050716 PMID:24920589 GO_REF:0000107 NCBI chr20:28,240,643...28,622,490
Ensembl chr20:28,240,645...28,622,419
JBrowse link
G Ceacam16 CEA cell adhesion molecule 16, tectorial membrane component located_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:21368133)
Ensembl
UniProt
RGD
PMID:21368133 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:79,514,975...79,524,871
Ensembl chr 1:79,514,975...79,524,871
JBrowse link
G Coro1a coronin 1A is_active_in ISO (PMID:26754646) RGD PMID:26754646 NCBI chr 1:181,295,561...181,300,566
Ensembl chr 1:181,295,562...181,300,534
JBrowse link
G Eps8 EGFR pathway substrate 8, signaling adaptor located_in ISO
IEA
(MGI:5509070|PMID:23918390)
GO_REF:0000107
RGD
Ensembl
PMID:23918390 GO_REF:0000107 MGI:5509070 NCBI chr 4:170,388,378...170,486,873
Ensembl chr 4:170,388,378...170,486,873
JBrowse link
G Eps8l2 EPS8-like 2 located_in ISO (MGI:5509070|PMID:23918390) RGD PMID:23918390 MGI:5509070 NCBI chr 1:196,446,260...196,471,544
Ensembl chr 1:196,446,287...196,471,541
JBrowse link
G Espn espin located_in
is_active_in
ISS
ISO
GO_REF:0000024
(PMID:26754646)
(MGI:5766107|PMID:26754646), (PMID:22264607)
UniProt
RGD
PMID:22264607 PMID:26754646 GO_REF:0000024 MGI:5766107 NCBI chr 5:162,626,560...162,660,439
Ensembl chr 5:162,626,560...162,660,256
JBrowse link
G Espnl espin-like located_in
is_active_in
ISO (MGI:5805759|PMID:26926603)
(PMID:26754646)
RGD PMID:26754646 PMID:26926603 MGI:5805759 NCBI chr 9:91,912,038...91,936,803
Ensembl chr 9:91,912,049...91,935,292
JBrowse link
G Homer2 homer scaffold protein 2 located_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5688813|PMID:25816005)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:25816005 GO_REF:0000024 GO_REF:0000107 MGI:5688813 NCBI chr 1:135,558,977...135,659,780
Ensembl chr 1:135,567,414...135,659,772
JBrowse link
G Lhfpl5 LHFPL tetraspan subfamily member 5 located_in ISO (PMID:23217710) RGD PMID:23217710 NCBI chr20:6,632,324...6,642,534
Ensembl chr20:6,632,362...6,642,532
JBrowse link
G Morn4 MORN repeat containing 4 located_in
is_active_in
ISS
ISO
GO_REF:0000024
(MGI:5766107|PMID:26754646)
(PMID:26754646)
UniProt
RGD
PMID:26754646 GO_REF:0000024 MGI:5766107 NCBI chr 1:240,888,338...240,898,644
Ensembl chr 1:240,888,344...240,898,716
JBrowse link
G Myo3a myosin IIIA is_active_in
located_in
IBA
ISO
GO_REF:0000033
(PMID:26754646)
(MGI:5766107|PMID:26754646), (PMID:21165622), (PMID:22264607)
GO_Central
RGD
PMID:21165622 PMID:22264607 PMID:26754646 GO_REF:0000033 MGI:5766107 NCBI chr17:84,543,465...84,759,562
Ensembl chr17:84,543,552...84,759,042
JBrowse link
G Myo3b myosin IIIB is_active_in
located_in
IBA
ISO
GO_REF:0000033
(PMID:26754646)
(MGI:5766107|PMID:26754646), (PMID:22264607)
GO_Central
RGD
PMID:22264607 PMID:26754646 GO_REF:0000033 MGI:5766107 NCBI chr 3:54,820,225...55,228,518
Ensembl chr 3:54,820,251...55,227,373
JBrowse link
G Nherf1 NHERF family PDZ scaffold protein 1 located_in ISO (PMID:24920589) RGD PMID:24920589 NCBI chr10:100,403,189...100,420,290
Ensembl chr10:100,403,069...100,420,598
JBrowse link
G Pdzd7 PDZ domain containing 7 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:243,888,295...243,907,778
Ensembl chr 1:243,888,281...243,906,839
JBrowse link
G Pkhd1l1 PKHD1 like 1 located_in ISO (PMID:31444330) RGD PMID:31444330 NCBI chr 7:75,620,384...75,795,335
Ensembl chr 7:75,620,484...75,795,335
JBrowse link
G Strc stereocilin is_active_in
located_in
IBA
ISO
GO_REF:0000033
(MGI:5430850|PMID:21165971), (PMID:18849963), (PMID:24920589), (PMID:31448880)
GO_Central
RGD
PMID:18849963 PMID:21165971 PMID:24920589 PMID:31448880 GO_REF:0000033 MGI:5430850 NCBI chr 3:108,335,920...108,355,114
Ensembl chr 3:108,335,747...108,354,134
JBrowse link
G Tmc1 transmembrane channel-like 1 located_in ISO (PMID:22105175) RGD PMID:22105175 NCBI chr 1:218,275,249...218,446,013
Ensembl chr 1:218,276,417...218,445,955
JBrowse link
G Tmc2 transmembrane channel-like 2 located_in ISO (PMID:22105175) RGD PMID:22105175 NCBI chr 3:117,396,378...117,464,336
Ensembl chr 3:117,396,378...117,464,336
JBrowse link
G Ush1c USH1 protein network component harmonin is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:96,695,303...96,743,671
Ensembl chr 1:96,695,307...96,743,671
JBrowse link
G Whrn whirlin located_in
is_active_in
IDA
IEA
IBA
ISO
PMID:23055499
GO_REF:0000107
GO_REF:0000033
GO_REF:0000118
(PMID:24334608), (PMID:31448880)
Ensembl
GO_Central
TreeGrafter
RGD
PMID:24334608 PMID:31448880 PMID:23055499 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118, RGD:13800540 NCBI chr 5:76,828,308...76,911,945
Ensembl chr 5:76,828,301...76,912,223
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21254
    cellular anatomical entity 21098
      stereocilium tip 21
Path 2
Term Annotations click to browse term
  cellular_component 21254
    cellular anatomical entity 21098
      cell projection 2681
        plasma membrane bounded cell projection 2593
          neuron projection 1644
            stereocilium 64
              stereocilium tip 21
paths to the root