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ONTOLOGY REPORT - ANNOTATIONS


Term:stereocilium tip
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Accession:GO:0032426 term browser browse the term
Definition:A distinct compartment at the tip of a stereocilium, distal to the site of attachment to the apical cell surface. It consists of a dense matrix bridging the barbed ends of the stereocilium actin filaments with the overlying plasma membrane, is dynamic compared to the shaft, and is required for stereocilium elongation.



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stereocilium tip term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc14a cell division cycle 14A located_in ISO (MGI:6118860|PMID:29293958) RGD PMID:29293958 MGI:6118860 NCBI chr 2:204,225,540...204,380,927
Ensembl chr 2:204,225,540...204,380,927
JBrowse link
G Cdh23 cadherin-related 23 located_in IEA
ISO
GO_REF:0000107
(MGI:2447265|PMID:12485990), (MGI:3686545|PMID:17050716), (MGI:5578076|PMID:24920589)
Ensembl
RGD
PMID:12485990 PMID:17050716 PMID:24920589 GO_REF:0000107 MGI:2447265 MGI:3686545 MGI:5578076 NCBI chr20:28,240,643...28,622,490
Ensembl chr20:28,240,645...28,622,419
JBrowse link
G Ceacam16 CEA cell adhesion molecule 16, tectorial membrane component located_in
is_active_in
IEA
IBA
ISO
ISS
GO_REF:0000107
PMID:21873635
(MGI:4947458|PMID:21368133)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:21368133 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:4947458, RGD:13792537 NCBI chr 1:79,514,975...79,524,871
Ensembl chr 1:79,514,975...79,524,871
JBrowse link
G Coro1a coronin 1A is_active_in ISO (MGI:5766107|PMID:26754646) RGD PMID:26754646 MGI:5766107 NCBI chr 1:181,295,561...181,300,566
Ensembl chr 1:181,295,562...181,300,534
JBrowse link
G Eps8 epidermal growth factor receptor pathway substrate 8 located_in ISO (MGI:5509070|PMID:23918390) RGD PMID:23918390 MGI:5509070 NCBI chr 4:170,388,378...170,486,873
Ensembl chr 4:170,388,378...170,486,873
JBrowse link
G Eps8l2 EPS8-like 2 located_in ISO (MGI:5509070|PMID:23918390) RGD PMID:23918390 MGI:5509070 NCBI chr 1:196,446,067...196,471,542
Ensembl chr 1:196,446,287...196,471,541
JBrowse link
G Espn espin located_in
is_active_in
ISS
ISO
GO_REF:0000024
(MGI:5766107|PMID:26754646)
(MGI:5315207|PMID:22264607), (MGI:5766107|PMID:26754646)
UniProt
RGD
PMID:22264607 PMID:26754646 GO_REF:0000024 MGI:5315207 MGI:5766107 NCBI chr 5:162,626,560...162,660,439
Ensembl chr 5:162,626,560...162,660,256
JBrowse link
G Espnl espin-like located_in
is_active_in
ISO (MGI:5805759|PMID:26926603)
(MGI:5766107|PMID:26754646)
RGD PMID:26754646 PMID:26926603 MGI:5766107 MGI:5805759 NCBI chr 9:91,912,049...91,935,292
Ensembl chr 9:91,912,049...91,935,292
JBrowse link
G Homer2 homer scaffold protein 2 located_in ISS
ISO
GO_REF:0000024
(MGI:5688813|PMID:25816005)
UniProt
RGD
PMID:25816005 GO_REF:0000024 MGI:5688813 NCBI chr 1:135,558,977...135,659,780
Ensembl chr 1:135,567,414...135,659,772
JBrowse link
G Lhfpl5 LHFPL tetraspan subfamily member 5 located_in ISO (MGI:5468200|PMID:23217710) RGD PMID:23217710 MGI:5468200 NCBI chr20:6,632,362...6,642,534
Ensembl chr20:6,632,362...6,642,532
JBrowse link
G Morn4 MORN repeat containing 4 located_in
is_active_in
ISS
ISO
GO_REF:0000024
(MGI:5766107|PMID:26754646)
UniProt
RGD
PMID:26754646 GO_REF:0000024 MGI:5766107 NCBI chr 1:240,888,338...240,898,644
Ensembl chr 1:240,888,344...240,898,716
JBrowse link
G Myo3a myosin IIIA located_in
is_active_in
ISO (MGI:4849846|PMID:21165622), (MGI:5315207|PMID:22264607), (MGI:5766107|PMID:26754646)
(MGI:5766107|PMID:26754646)
RGD PMID:21165622 PMID:22264607 PMID:26754646 MGI:4849846 MGI:5315207 MGI:5766107 NCBI chr17:84,554,785...84,604,748
Ensembl chr17:84,543,552...84,759,042
JBrowse link
G Myo3b myosin IIIB located_in
is_active_in
ISO (MGI:5315207|PMID:22264607), (MGI:5766107|PMID:26754646)
(MGI:5766107|PMID:26754646)
RGD PMID:22264607 PMID:26754646 MGI:5315207 MGI:5766107 NCBI chr 3:54,873,704...55,226,189
Ensembl chr 3:54,820,251...55,227,373
JBrowse link
G Pdzd7 PDZ domain containing 7 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:243,888,295...243,907,778
Ensembl chr 1:243,888,281...243,906,839
JBrowse link
G Pkhd1l1 PKHD1 like 1 located_in ISO (MGI:6358987|PMID:31444330) RGD PMID:31444330 MGI:6358987 NCBI chr 7:75,620,384...75,795,335
Ensembl chr 7:75,620,484...75,795,335
JBrowse link
G Slc9a3r1 SLC9A3 regulator 1 located_in ISO (MGI:5578076|PMID:24920589) RGD PMID:24920589 MGI:5578076 NCBI chr10:100,403,189...100,420,290
Ensembl chr10:100,403,069...100,420,598
JBrowse link
G Strc stereocilin located_in
is_active_in
ISO
IBA
(MGI:3818235|PMID:18849963), (MGI:5430850|PMID:21165971), (MGI:5578076|PMID:24920589), (MGI:6376373|PMID:31448880)
PMID:21873635
RGD PMID:18849963 PMID:21165971 PMID:24920589 PMID:31448880 PMID:21873635 MGI:3818235 MGI:5430850 MGI:5578076 MGI:6376373, RGD:13792537 NCBI chr 3:108,335,920...108,355,114
Ensembl chr 3:108,335,747...108,354,134
JBrowse link
G Tmc1 transmembrane channel-like 1 located_in ISO (MGI:5320864|PMID:22105175) RGD PMID:22105175 MGI:5320864 NCBI chr 1:218,275,262...218,445,955
Ensembl chr 1:218,276,417...218,445,955
JBrowse link
G Tmc2 transmembrane channel-like 2 located_in ISO (MGI:5320864|PMID:22105175) RGD PMID:22105175 MGI:5320864 NCBI chr 3:117,396,378...117,464,336
Ensembl chr 3:117,396,378...117,464,336
JBrowse link
G Ush1c USH1 protein network component harmonin is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:96,695,303...96,743,671
Ensembl chr 1:96,695,307...96,743,671
JBrowse link
G Whrn whirlin located_in
is_active_in
IDA
IBA
ISO
IEA
PMID:23055499
PMID:21873635
(MGI:5565635|PMID:24334608), (MGI:6376373|PMID:31448880)
GO_REF:0000107
RGD
Ensembl
PMID:24334608 PMID:31448880 PMID:23055499 PMID:21873635 GO_REF:0000107 MGI:5565635 MGI:6376373, RGD:13800540, RGD:13792537 NCBI chr 5:76,828,308...76,911,945
Ensembl chr 5:76,828,301...76,912,223
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19969
    cellular anatomical entity 19676
      stereocilium tip 21
Path 2
Term Annotations click to browse term
  cellular_component 19969
    cellular anatomical entity 19676
      cell projection 2594
        plasma membrane bounded cell projection 2519
          neuron projection 1677
            stereocilium 62
              stereocilium tip 21
paths to the root